ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast71c05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016569.1| Zea mays clone Contig402 mRNA sequence Length = 719 Score = 408 bits (206), Expect = e-111 Identities = 308/342 (90%) Strand = Plus / Plus Query: 108 ccggagccggagcgaaggggaagaagggcgcggcgggccgcaaggccggcgggccgagga 167 |||||||||| | ||||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 110 ccggagccggcgggaaggcgaagaagggcgcggccgggcgcaaggccggcgggccgagga 169 Query: 168 agaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggc 227 |||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 170 agaagtcggtgacgaggtccgtcaaggccgggctgcagtttcccgtcggccgcatcgggc 229 Query: 228 ggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcg 287 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 230 ggtacctgaagaagggccggtacgcgcagcgcgtcggcacgggcgcccccgtctacctgg 289 Query: 288 ccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgccaagg 347 ||||||||||||||||||||||||||||| || ||||||| ||||| ||||| ||||||| Sbjct: 290 ccgccgtcctcgagtacctggccgccgaggtgctggagctggccggcaacgctgccaagg 349 Query: 348 acaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgaggaacgaccagg 407 ||||||||||| |||||||| | || | ||| ||||||| ||| | | |||||| ||| Sbjct: 350 acaacaagaagacccgcatcatcccgcgccacgtgctccttgccatccgcaacgacgagg 409 Query: 408 agctcgggaggctgctggccggcgtcaccatcgcgcacggcg 449 ||||||| | ||||||| |||||||||||||||| ||||||| Sbjct: 410 agctcggcaagctgctgtccggcgtcaccatcgcccacggcg 451
>gb|AY103710.1| Zea mays PCO123562 mRNA sequence Length = 770 Score = 408 bits (206), Expect = e-111 Identities = 308/342 (90%) Strand = Plus / Plus Query: 108 ccggagccggagcgaaggggaagaagggcgcggcgggccgcaaggccggcgggccgagga 167 |||||||||| | ||||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 110 ccggagccggcgggaaggcgaagaagggcgcggccgggcgcaaggccggcgggccgagga 169 Query: 168 agaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggc 227 |||||||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct: 170 agaagtcggtgacgaggtccgtcaaggccgggctgcagtttcccgtcggccgcatcgggc 229 Query: 228 ggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcg 287 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 230 ggtacctgaagaagggccggtacgcgcagcgcgtcggcacgggcgcccccgtctacctgg 289 Query: 288 ccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgccaagg 347 ||||||||||||||||||||||||||||| || ||||||| ||||| ||||| ||||||| Sbjct: 290 ccgccgtcctcgagtacctggccgccgaggtgctggagctggccggcaacgctgccaagg 349 Query: 348 acaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgaggaacgaccagg 407 ||||||||||| |||||||| | || | ||| ||||||| ||| | | |||||| ||| Sbjct: 350 acaacaagaagacccgcatcatcccgcgccacgtgctccttgccatccgcaacgacgagg 409 Query: 408 agctcgggaggctgctggccggcgtcaccatcgcgcacggcg 449 ||||||| | ||||||| |||||||||||||||| ||||||| Sbjct: 410 agctcggcaagctgctgtccggcgtcaccatcgcccacggcg 451
>gb|BT019008.1| Zea mays clone Contig499.F mRNA sequence Length = 674 Score = 339 bits (171), Expect = 5e-90 Identities = 313/359 (87%), Gaps = 1/359 (0%) Strand = Plus / Plus Query: 92 atggacgcctcgggcaccggagccggagcgaaggggaagaagggcgcggcgggccgcaag 151 ||||||||| | ||||| ||||| |||| ||||| ||||||||| ||||| || |||||| Sbjct: 51 atggacgccaccggcactggagctggagggaaggcgaagaagggagcggccggtcgcaag 110 Query: 152 gccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttcccc 211 |||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||| Sbjct: 111 gccggcgggccgaggaagaagtcggtgacgaggtccgtgaaggccgggctccagttcccc 170 Query: 212 gtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggc 271 ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| || Sbjct: 171 gtcggccgcatcgggcgctacctcaagaagggccgctacgcgcagcgcgtcggcagcggt 230 Query: 272 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 331 ||||||||||||||||| |||||||| |||||||| ||||| ||| | ||||||||||| Sbjct: 231 gcccccgtctacctcgcggccgtcctggagtacctcgccgctgaggtcctggagctcgcc 290 Query: 332 gggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgcc 391 || ||||| |||||||||||||||||| | |||||||| || | ||| |||| || || Sbjct: 291 ggcaacgctgccaaggacaacaagaagacgcgcatcgtcccgcgccacgtgctgctggcg 350 Query: 392 gtgaggaacgaccaggagctcggg-aggctgctggccggcgtcaccatcgcgcacggcg 449 | | |||||| ||||||||||| ||||||||| ||||||| |||||||| ||||||| Sbjct: 351 atccgcaacgacgaggagctcgggaaggctgctgaccggcgtgaccatcgcccacggcg 409
>gb|AY103585.1| Zea mays PCO123564 mRNA sequence Length = 1953 Score = 333 bits (168), Expect = 3e-88 Identities = 288/328 (87%) Strand = Plus / Plus Query: 122 aaggggaagaagggcgcggcgggccgcaaggccggcgggccgaggaagaagtcggtgacg 181 |||||||||||||| ||||| || |||||||| ||||| || |||||||||||||||||| Sbjct: 242 aaggggaagaagggggcggccgggcgcaaggcaggcggccccaggaagaagtcggtgacg 301 Query: 182 cggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaag 241 ||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 302 cggtccgtcaaggccgggctgcagttccccgtcggccggatcgggcgctacctcaagaag 361 Query: 242 ggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgag 301 |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 362 ggccggtacgcgcagcgcgtgggcactggcgcccccgtctacctcgccgccgtcctggag 421 Query: 302 tacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcc 361 ||||| ||||||||| | ||||| | || |||||||| || || |||||||||||| | Sbjct: 422 tacctcgccgccgaggttctggagttggcagggaacgcggcgaaagacaacaagaagacg 481 Query: 362 cgcatcgtgcccaggcacctgctcctcgccgtgaggaacgaccaggagctcgggaggctg 421 |||||| | || | ||| ||||||| || | | |||||| |||||||||||| |||| Sbjct: 482 cgcatcatcccgcgccacgtgctcctggcgatccgcaacgacgaggagctcgggaagctg 541 Query: 422 ctggccggcgtcaccatcgcgcacggcg 449 |||||||||||||||||||||||||||| Sbjct: 542 ctggccggcgtcaccatcgcgcacggcg 569
>gb|BT019315.1| Zea mays clone Contig989.F mRNA sequence Length = 699 Score = 321 bits (162), Expect = 1e-84 Identities = 285/326 (87%) Strand = Plus / Plus Query: 122 aaggggaagaagggcgcggcgggccgcaaggccggcgggccgaggaagaagtcggtgacg 181 |||||||||||||| ||||| || |||||||| ||||| || |||||||||||||||||| Sbjct: 93 aaggggaagaagggggcggccgggcgcaaggcaggcggccccaggaagaagtcggtgacg 152 Query: 182 cggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaag 241 ||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 153 cggtccgtcaaggccgggctgcagttccccgtcggccggatcgggcgctacctcaagaag 212 Query: 242 ggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgag 301 |||||||||||| ||||||| ||||| |||||||||||||||||||||||||| || ||| Sbjct: 213 ggccggtacgcgcagcgcgtgggcactggcgcccccgtctacctcgccgccgttctggag 272 Query: 302 tacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcc 361 ||||| ||||||||| | ||||| | || |||||||| || || |||||||||||| | Sbjct: 273 tacctcgccgccgaggttctggagttggcagggaacgcggcgaaagacaacaagaagacg 332 Query: 362 cgcatcgtgcccaggcacctgctcctcgccgtgaggaacgaccaggagctcgggaggctg 421 |||||| | || | ||| ||||||| || | | |||||| |||||||||||| |||| Sbjct: 333 cgcatcatcccgcgccacgtgctcctggcgatccgcaacgacgaggagctcgggaagctg 392 Query: 422 ctggccggcgtcaccatcgcgcacgg 447 |||||||||||||||||||||||||| Sbjct: 393 ctggccggcgtcaccatcgcgcacgg 418
>dbj|D38090.1|WHTPH2AD Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-9 Length = 704 Score = 309 bits (156), Expect = 4e-81 Identities = 252/284 (88%) Strand = Plus / Plus Query: 164 aggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatc 223 ||||||||| ||||||| || || || ||||||||||||||||||||||||||||||||| Sbjct: 87 aggaagaaggcggtgacccgctccgtgaaggccgggctccagttccccgtcggccgcatc 146 Query: 224 gggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctac 283 ||||| ||||||||||||||||| ||||| ||||||||||| | ||||||||||||||| Sbjct: 147 gggcgctacctcaagaagggccgctacgcccagcgcgtcggctccggcgcccccgtctac 206 Query: 284 ctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgcc 343 ||||||||||||||||||||||| ||||||||| || ||||||| ||||| ||||| ||| Sbjct: 207 ctcgccgccgtcctcgagtacctcgccgccgaggtgctggagcttgccggcaacgcggcc 266 Query: 344 aaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgaggaacgac 403 ||||||||||||||| |||||||| | || | |||||||| ||||| || | |||||| Sbjct: 267 aaggacaacaagaagacccgcatcatcccgcgccacctgctgctcgctgtccgcaacgac 326 Query: 404 caggagctcgggaggctgctggccggcgtcaccatcgcgcacgg 447 ||||||||||| |||||||| || |||||||||||||| ||||| Sbjct: 327 caggagctcggcaggctgctcgctggcgtcaccatcgcccacgg 370
>ref|NM_193707.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 480 Score = 307 bits (155), Expect = 2e-80 Identities = 263/299 (87%) Strand = Plus / Plus Query: 149 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 208 |||||||| ||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 58 aaggccggtgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 117 Query: 209 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 268 ||||||||||| ||||| || ||||||||||||||||| |||||| ||||| ||||||| Sbjct: 118 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcgcagcgcatcggcacc 177 Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 |||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||| Sbjct: 178 ggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtgctggagctc 237 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctc 388 ||||||||||| |||| ||||||||||||| | | ||| | || | ||| |||| || Sbjct: 238 gccgggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacgtgctgctg 297 Query: 389 gccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacgg 447 || | ||||||||| |||||||||| | ||||||||||||||| |||||||||||||| Sbjct: 298 gcgatcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcgcgcacgg 356
>dbj|D38087.1|WHTPH2AA Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-2 Length = 717 Score = 305 bits (154), Expect = 7e-80 Identities = 253/286 (88%) Strand = Plus / Plus Query: 164 aggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatc 223 ||||||||| ||||||| || || |||||||||||||| ||||||||||||||||||||| Sbjct: 110 aggaagaaggcggtgacccgctccgtcaaggccgggctgcagttccccgtcggccgcatc 169 Query: 224 gggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctac 283 ||||| ||||||||||||||||| ||||| ||||||||||| | ||||||||||||||| Sbjct: 170 gggcgctacctcaagaagggccgctacgcccagcgcgtcggctccggcgcccccgtctac 229 Query: 284 ctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgcc 343 ||||||||||||||||||||||| ||||||||| | ||||||| ||||| ||||| ||| Sbjct: 230 ctcgccgccgtcctcgagtacctcgccgccgaggtcctggagcttgccggcaacgcggcc 289 Query: 344 aaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgaggaacgac 403 ||||||||||||||| | |||||| | || | |||||||| || ||||| | |||||| Sbjct: 290 aaggacaacaagaagacgcgcatcatcccgcgccacctgctgctggccgtccgcaacgac 349 Query: 404 caggagctcgggaggctgctggccggcgtcaccatcgcgcacggcg 449 ||||||||||| |||||||| ||||||||||||||||| ||||||| Sbjct: 350 caggagctcggcaggctgctcgccggcgtcaccatcgcccacggcg 395
>dbj|AK121750.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087I02, full insert sequence Length = 754 Score = 299 bits (151), Expect = 4e-78 Identities = 262/299 (87%) Strand = Plus / Plus Query: 149 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 208 |||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 148 aaggccggcgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 207 Query: 209 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 268 ||||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 208 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcccagcgcatcggcacc 267 Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 |||||||||||||||||||||||||||||||||||||| || |||||| || |||||||| Sbjct: 268 ggcgcccccgtctacctcgccgccgtcctcgagtacctcgctgccgaggtgctggagctc 327 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctc 388 ||||||||||| |||| ||||||||||||| | | ||| | || | ||| |||| || Sbjct: 328 gccgggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacgtgctgctg 387 Query: 389 gccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacgg 447 || | ||||||||| |||||||||| | ||||||||||||||| |||||||||||||| Sbjct: 388 gcgatcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcgcgcacgg 446
>dbj|D38088.1|WHTPH2AB Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-3 Length = 1153 Score = 299 bits (151), Expect = 4e-78 Identities = 253/287 (88%) Strand = Plus / Plus Query: 163 gaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcat 222 |||||||||| ||||||| || || || |||||||||||||||||||||||||||||||| Sbjct: 107 gaggaagaaggcggtgacccgctccgtgaaggccgggctccagttccccgtcggccgcat 166 Query: 223 cgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtcta 282 |||||| ||||||||||||||||| |||||| || ||||||| | |||||||||||||| Sbjct: 167 cgggcgctacctcaagaagggccgctacgcgcaggccgtcggctccggcgcccccgtcta 226 Query: 283 cctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgc 342 |||||||||||||||||||||||| ||||||||| | ||||||||||||| ||||| || Sbjct: 227 cctcgccgccgtcctcgagtacctcgccgccgaggtcctggagctcgccggcaacgcggc 286 Query: 343 caaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgaggaacga 402 |||||||||||||||| | |||||| | || | |||||||| || ||||| | ||||| Sbjct: 287 caaggacaacaagaagacgcgcatcatcccgcgccacctgctgctggccgtccgcaacga 346 Query: 403 ccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcg 449 ||||||||| || |||||||| ||||||||||||||||| ||||||| Sbjct: 347 ccaggagctgggcaggctgctcgccggcgtcaccatcgcccacggcg 393
>dbj|AK074018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075N03, full insert sequence Length = 797 Score = 291 bits (147), Expect = 1e-75 Identities = 258/295 (87%) Strand = Plus / Plus Query: 155 ggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtc 214 |||||||||| ||||||| ||||| |||| || ||||||||||||||||||||||||||| Sbjct: 132 ggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgtc 191 Query: 215 ggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcc 274 ||||||||||| || ||||||||||||||||| ||||| ||||||||||||| |||||| Sbjct: 192 ggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgcc 251 Query: 275 cccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccggg 334 |||||||||||||||||||||||||||||||| ||||| ||| || |||||||||||||| Sbjct: 252 cccgtctacctcgccgccgtcctcgagtacctcgccgcagaggtgctggagctcgccggg 311 Query: 335 aacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtg 394 ||||| || ||||||||||||| ||| ||| | || |||||| |||| || || | Sbjct: 312 aacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacgtgctgctggcgatc 371 Query: 395 aggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcg 449 | |||||| |||||||||||| |||||| ||||| ||||||||||||||||||| Sbjct: 372 cgcaacgacgaggagctcgggaagctgctcgccggggtcaccatcgcgcacggcg 426
>gb|U08225.1|ZMU08225 Zea mays W-22 histone H2A mRNA, complete cds Length = 714 Score = 248 bits (125), Expect = 1e-62 Identities = 290/346 (83%) Strand = Plus / Plus Query: 104 ggcaccggagccggagcgaaggggaagaagggcgcggcgggccgcaaggccggcgggccg 163 ||||||||||| || | |||||||||||||| ||||| || ||||||| ||||||||| Sbjct: 81 ggcaccggagcagggggtaaggggaagaagggagcggccgggcgcaaggtcggcgggcca 140 Query: 164 aggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatc 223 ||||||||||||||| || |||| || |||||||| |||||||||||||||||||||||| Sbjct: 141 aggaagaagtcggtgtcgaggtccgtgaaggccggtctccagttccccgtcggccgcatc 200 Query: 224 gggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctac 283 ||||| ||| | ||||||||||| |||||| || |||||||| ||||||||||||||| Sbjct: 201 gggcgctacttgaagaagggccgctacgcgcagnyygtcggcaccggcgcccccgtctac 260 Query: 284 ctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgcc 343 |||||||| |||||||| ||||| ||||| ||| | ||||||||||||| || || ||| Sbjct: 261 ctcgccgctgtcctcgaatacctcgccgctgaggttctggagctcgccggtaatgctgcc 320 Query: 344 aaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgaggaacgac 403 | ||||||||||||| | ||||| | || | ||| |||| || || | |||||||| Sbjct: 321 agggacaacaagaagactcgcattattccgcgccacgtgcttctggcgatccggaacgac 380 Query: 404 caggagctcgggaggctgctggccggcgtcaccatcgcgcacggcg 449 ||||||| |||| |||| ||| |||||| |||||||| ||||||| Sbjct: 381 gaggagcttgggaagctgttgggcggcgtgaccatcgctcacggcg 426
>ref|XM_475374.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 492 Score = 238 bits (120), Expect = 1e-59 Identities = 252/296 (85%) Strand = Plus / Plus Query: 154 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 213 ||||||||||| ||||||| ||||| | || || |||||||||||||||||||||||||| Sbjct: 57 cggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgt 116 Query: 214 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 273 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 117 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 176 Query: 274 ccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgg 333 ||||||||||||||||||||||||||||||||| ||||||||| || | ||||| || || Sbjct: 177 ccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtgctcgagcttgcggg 236 Query: 334 gaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgt 393 |||||| || ||||||||||||| ||| ||| | || ||||| |||| || || | Sbjct: 237 gaacgcggcgcgggacaacaagaagaaccggatcatcccgcggcacgtgctgctggcgat 296 Query: 394 gaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcg 449 | |||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 297 ccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcg 352
>dbj|AK067406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N23, full insert sequence Length = 1097 Score = 238 bits (120), Expect = 1e-59 Identities = 252/296 (85%) Strand = Plus / Plus Query: 154 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 213 ||||||||||| ||||||| ||||| | || || |||||||||||||||||||||||||| Sbjct: 128 cggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgt 187 Query: 214 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 273 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 188 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 247 Query: 274 ccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgg 333 ||||||||||||||||||||||||||||||||| ||||||||| || | ||||| || || Sbjct: 248 ccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtgctcgagcttgcggg 307 Query: 334 gaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgt 393 |||||| || ||||||||||||| ||| ||| | || ||||| |||| || || | Sbjct: 308 gaacgcggcgcgggacaacaagaagaaccggatcatcccgcggcacgtgctgctggcgat 367 Query: 394 gaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcg 449 | |||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 368 ccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcg 423
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 230 bits (116), Expect = 3e-57 Identities = 155/168 (92%) Strand = Plus / Plus Query: 149 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 208 |||||||| ||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 17416697 aaggccggtgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 17416756 Query: 209 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 268 ||||||||||| ||||| || ||||||||||||||||| |||||| ||||| ||||||| Sbjct: 17416757 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcgcagcgcatcggcacc 17416816 Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgag 316 |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 17416817 ggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 17416864 Score = 85.7 bits (43), Expect = 1e-13 Identities = 106/127 (83%) Strand = Plus / Plus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 380 ||||||||||||||||||| |||| ||||||||||||| | | ||| | || | ||| Sbjct: 17416980 tggagctcgccgggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacg 17417039 Query: 381 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 440 |||| || || | ||||||||| |||||||||| | ||||||||||||||| ||||||| Sbjct: 17417040 tgctgctggcgatcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcg 17417099 Query: 441 cgcacgg 447 ||||||| Sbjct: 17417100 cgcacgg 17417106 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 ccccgtctacctcgccgccg 293 |||||||||||||||||||| Sbjct: 31905196 ccccgtctacctcgccgccg 31905177
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 230 bits (116), Expect = 3e-57 Identities = 155/168 (92%) Strand = Plus / Plus Query: 149 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 208 |||||||| ||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 70089 aaggccggtgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 70148 Query: 209 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 268 ||||||||||| ||||| || ||||||||||||||||| |||||| ||||| ||||||| Sbjct: 70149 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcgcagcgcatcggcacc 70208 Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgag 316 |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 70209 ggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 70256 Score = 85.7 bits (43), Expect = 1e-13 Identities = 106/127 (83%) Strand = Plus / Plus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 380 ||||||||||||||||||| |||| ||||||||||||| | | ||| | || | ||| Sbjct: 70372 tggagctcgccgggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacg 70431 Query: 381 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 440 |||| || || | ||||||||| |||||||||| | ||||||||||||||| ||||||| Sbjct: 70432 tgctgctggcgatcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcg 70491 Query: 441 cgcacgg 447 ||||||| Sbjct: 70492 cgcacgg 70498
>dbj|AK099763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094K03, full insert sequence Length = 912 Score = 230 bits (116), Expect = 3e-57 Identities = 251/296 (84%) Strand = Plus / Plus Query: 154 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 213 ||||||||||| ||||||| ||||| | | || |||||||||||||||||||||||||| Sbjct: 127 cggcgggccgaagaagaagccggtgtccccctccgtcaaggccgggctccagttccccgt 186 Query: 214 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 273 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 187 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 246 Query: 274 ccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgg 333 ||||||||||||||||||||||||||||||||| ||||||||| || | ||||| || || Sbjct: 247 ccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtgctcgagcttgcggg 306 Query: 334 gaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgt 393 |||||| || ||||||||||||| ||| ||| | || ||||| |||| || || | Sbjct: 307 gaacgcggcgcgggacaacaagaagaaccggatcatcccgcggcacgtgctgctggcgat 366 Query: 394 gaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcg 449 | |||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 367 ccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcg 422
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 222 bits (112), Expect = 8e-55 Identities = 154/168 (91%) Strand = Plus / Minus Query: 149 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 208 |||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 9471665 aaggccggcgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 9471606 Query: 209 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 268 ||||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 9471605 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcccagcgcatcggcacc 9471546 Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgag 316 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 9471545 ggcgcccccgtctacctcgccgccgtcctcgagtacctcgctgccgag 9471498 Score = 159 bits (80), Expect = 9e-36 Identities = 131/148 (88%) Strand = Plus / Plus Query: 169 gaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcg 228 |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 28997918 gaaggcggtgtcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccg 28997977 Query: 229 gtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgc 288 ||||||||| ||| ||||||| ||||||||||| | |||||||||||||||||| | Sbjct: 28997978 ctacctcaaggccggcaagtacgcggagcgcgtcggcgccggcgcccccgtctacctctc 28998037 Query: 289 cgccgtcctcgagtacctggccgccgag 316 |||||||||||||||||| ||||||||| Sbjct: 28998038 cgccgtcctcgagtacctcgccgccgag 28998065 Score = 119 bits (60), Expect = 8e-24 Identities = 85/92 (92%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 149 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 208 ||||||||||||| |||||||||| |||||||||| || ||||||||||||||||| ||| Sbjct: 2463931 aaggccggcgggc-gaggaagaaggcggtgacgcgctccgtcaaggccgggctccaattc 2463989 Query: 209 cccgtcggccgcatcgggcggtacctcaagaa 240 ||||||||||| |||||||| ||||||||||| Sbjct: 2463990 cccgtcggccgtatcgggcgctacctcaagaa 2464021 Score = 85.7 bits (43), Expect = 1e-13 Identities = 106/127 (83%) Strand = Plus / Minus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 380 ||||||||||||||||||| |||| ||||||||||||| | | ||| | || | ||| Sbjct: 9471392 tggagctcgccgggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacg 9471333 Query: 381 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 440 |||| || || | ||||||||| |||||||||| | ||||||||||||||| ||||||| Sbjct: 9471332 tgctgctggcgatcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcg 9471273 Query: 441 cgcacgg 447 ||||||| Sbjct: 9471272 cgcacgg 9471266 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||| ||||||||||| || | ||||||||||||| Sbjct: 28998174 tggagctggccgggaacgcggcgagggacaacaagaag 28998211
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 222 bits (112), Expect = 8e-55 Identities = 154/168 (91%) Strand = Plus / Minus Query: 149 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 208 |||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 169065 aaggccggcgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 169006 Query: 209 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 268 ||||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 169005 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcccagcgcatcggcacc 168946 Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgag 316 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 168945 ggcgcccccgtctacctcgccgccgtcctcgagtacctcgctgccgag 168898 Score = 85.7 bits (43), Expect = 1e-13 Identities = 106/127 (83%) Strand = Plus / Minus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 380 ||||||||||||||||||| |||| ||||||||||||| | | ||| | || | ||| Sbjct: 168792 tggagctcgccgggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacg 168733 Query: 381 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 440 |||| || || | ||||||||| |||||||||| | ||||||||||||||| ||||||| Sbjct: 168732 tgctgctggcgatcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcg 168673 Query: 441 cgcacgg 447 ||||||| Sbjct: 168672 cgcacgg 168666
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 222 bits (112), Expect = 8e-55 Identities = 154/168 (91%) Strand = Plus / Minus Query: 149 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 208 |||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||| Sbjct: 9469786 aaggccggcgggccgaggaagaaggcggtgtcgcgctccgtcaaggccgggctccagttc 9469727 Query: 209 cccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacg 268 ||||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||||| Sbjct: 9469726 cccgtcggccgtatcggccgctacctcaagaagggccgctacgcccagcgcatcggcacc 9469667 Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgag 316 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 9469666 ggcgcccccgtctacctcgccgccgtcctcgagtacctcgctgccgag 9469619 Score = 159 bits (80), Expect = 9e-36 Identities = 131/148 (88%) Strand = Plus / Plus Query: 169 gaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcg 228 |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 29089340 gaaggcggtgtcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccg 29089399 Query: 229 gtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgc 288 ||||||||| ||| ||||||| ||||||||||| | |||||||||||||||||| | Sbjct: 29089400 ctacctcaaggccggcaagtacgcggagcgcgtcggcgccggcgcccccgtctacctctc 29089459 Query: 289 cgccgtcctcgagtacctggccgccgag 316 |||||||||||||||||| ||||||||| Sbjct: 29089460 cgccgtcctcgagtacctcgccgccgag 29089487 Score = 119 bits (60), Expect = 8e-24 Identities = 85/92 (92%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 149 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 208 ||||||||||||| |||||||||| |||||||||| || ||||||||||||||||| ||| Sbjct: 2464041 aaggccggcgggc-gaggaagaaggcggtgacgcgctccgtcaaggccgggctccaattc 2464099 Query: 209 cccgtcggccgcatcgggcggtacctcaagaa 240 ||||||||||| |||||||| ||||||||||| Sbjct: 2464100 cccgtcggccgtatcgggcgctacctcaagaa 2464131 Score = 85.7 bits (43), Expect = 1e-13 Identities = 106/127 (83%) Strand = Plus / Minus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 380 ||||||||||||||||||| |||| ||||||||||||| | | ||| | || | ||| Sbjct: 9469513 tggagctcgccgggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacg 9469454 Query: 381 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 440 |||| || || | ||||||||| |||||||||| | ||||||||||||||| ||||||| Sbjct: 9469453 tgctgctggcgatcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcg 9469394 Query: 441 cgcacgg 447 ||||||| Sbjct: 9469393 cgcacgg 9469387 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||| ||||||||||| || | ||||||||||||| Sbjct: 29089596 tggagctggccgggaacgcggcgagggacaacaagaag 29089633
>ref|XM_475081.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 522 Score = 218 bits (110), Expect = 1e-53 Identities = 146/158 (92%) Strand = Plus / Plus Query: 155 ggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtc 214 |||||||||| ||||||| ||||| |||| || ||||||||||||||||||||||||||| Sbjct: 55 ggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgtc 114 Query: 215 ggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcc 274 ||||||||||| || ||||||||||||||||| ||||| ||||||||||||| |||||| Sbjct: 115 ggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgcc 174 Query: 275 cccgtctacctcgccgccgtcctcgagtacctggccgc 312 |||||||||||||||||||||||||||||||| ||||| Sbjct: 175 cccgtctacctcgccgccgtcctcgagtacctcgccgc 212 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 380 ||||||||||||||||||| || ||||||||||||| ||| ||| | || |||||| Sbjct: 272 tggagctcgccgggaacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacg 331 Query: 381 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 440 |||| || || | | |||||| |||||||||||| |||||| ||||| |||||||||| Sbjct: 332 tgctgctggcgatccgcaacgacgaggagctcgggaagctgctcgccggggtcaccatcg 391 Query: 441 cgcacggcg 449 ||||||||| Sbjct: 392 cgcacggcg 400
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 218 bits (110), Expect = 1e-53 Identities = 146/158 (92%) Strand = Plus / Plus Query: 155 ggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtc 214 |||||||||| ||||||| ||||| |||| || ||||||||||||||||||||||||||| Sbjct: 706990 ggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgtc 707049 Query: 215 ggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcc 274 ||||||||||| || ||||||||||||||||| ||||| ||||||||||||| |||||| Sbjct: 707050 ggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgcc 707109 Query: 275 cccgtctacctcgccgccgtcctcgagtacctggccgc 312 |||||||||||||||||||||||||||||||| ||||| Sbjct: 707110 cccgtctacctcgccgccgtcctcgagtacctcgccgc 707147 Score = 180 bits (91), Expect = 3e-42 Identities = 145/163 (88%) Strand = Plus / Minus Query: 154 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 213 ||||||||||| ||||||| ||||| | || || |||||||||||||||||||||||||| Sbjct: 22512739 cggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgt 22512680 Query: 214 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 273 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 22512679 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 22512620 Query: 274 ccccgtctacctcgccgccgtcctcgagtacctggccgccgag 316 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 22512619 ccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 22512577 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 398 aacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcg 449 |||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 22512419 aacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcg 22512368 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 380 ||||||||||||||||||| || ||||||||||||| ||| ||| | || |||||| Sbjct: 707235 tggagctcgccgggaacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacg 707294 Query: 381 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 440 |||| || || | | |||||| |||||||||||| |||||| ||||| |||||||||| Sbjct: 707295 tgctgctggcgatccgcaacgacgaggagctcgggaagctgctcgccggggtcaccatcg 707354 Query: 441 cgcacggcg 449 ||||||||| Sbjct: 707355 cgcacggcg 707363
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 218 bits (110), Expect = 1e-53 Identities = 146/158 (92%) Strand = Plus / Plus Query: 155 ggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtc 214 |||||||||| ||||||| ||||| |||| || ||||||||||||||||||||||||||| Sbjct: 52189 ggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgtc 52248 Query: 215 ggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcc 274 ||||||||||| || ||||||||||||||||| ||||| ||||||||||||| |||||| Sbjct: 52249 ggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgcc 52308 Query: 275 cccgtctacctcgccgccgtcctcgagtacctggccgc 312 |||||||||||||||||||||||||||||||| ||||| Sbjct: 52309 cccgtctacctcgccgccgtcctcgagtacctcgccgc 52346 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 380 ||||||||||||||||||| || ||||||||||||| ||| ||| | || |||||| Sbjct: 52434 tggagctcgccgggaacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacg 52493 Query: 381 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 440 |||| || || | | |||||| |||||||||||| |||||| ||||| |||||||||| Sbjct: 52494 tgctgctggcgatccgcaacgacgaggagctcgggaagctgctcgccggggtcaccatcg 52553 Query: 441 cgcacggcg 449 ||||||||| Sbjct: 52554 cgcacggcg 52562
>gb|AY109370.1| Zea mays CL2029_4 mRNA sequence Length = 1051 Score = 208 bits (105), Expect = 1e-50 Identities = 253/304 (83%) Strand = Plus / Plus Query: 146 cgcaaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccag 205 ||||||| ||||||||| ||||||||||||||| || |||| || ||||||||||||||| Sbjct: 142 cgcaaggtcggcgggccaaggaagaagtcggtgtcgaggtccgtgaaggccgggctccag 201 Query: 206 ttccccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggc 265 ||||||||||||||||||||||| ||| | ||||||||||| |||||| |||| |||||| Sbjct: 202 ttccccgtcggccgcatcgggcgctacttgaagaagggccgctacgcgcagcgtgtcggc 261 Query: 266 acgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggag 325 || |||| |||||||||||||| |||||||| ||||| ||||| ||| | ||||| Sbjct: 262 accggcgnnnnngtctacctcgccgctgtcctcgaatacctcgccgctgaggttctggag 321 Query: 326 ctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctc 385 ||||| || || || |||| ||||||||||||| | ||||| | || | ||| |||| Sbjct: 322 ctcgctggtaatgctgccagggacaacaagaagactcgcattattccgcgccacgtgctt 381 Query: 386 ctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcac 445 || || | |||||||| ||||||| |||| |||||||| |||||| |||||||| ||| Sbjct: 382 ctggcgatccggaacgacgaggagcttgggaagctgctgggcggcgtgaccatcgctcac 441 Query: 446 ggcg 449 |||| Sbjct: 442 ggcg 445
>emb|X94973.1|TAH2A274 T.aestivum histone H2A gene (clone TH274) Length = 2546 Score = 200 bits (101), Expect = 3e-48 Identities = 140/153 (91%) Strand = Plus / Plus Query: 164 aggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatc 223 ||||||||| ||||||| |||| || ||||||||||||||||||||||||||||||||| Sbjct: 1814 aggaagaaggcggtgaccaggtccgtgaaggccgggctccagttccccgtcggccgcatc 1873 Query: 224 gggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctac 283 ||||| ||||||||||||||||| ||||| ||||| ||||| | ||||||||||||||| Sbjct: 1874 gggcgctacctcaagaagggccgctacgcccagcgcatcggctccggcgcccccgtctac 1933 Query: 284 ctcgccgccgtcctcgagtacctggccgccgag 316 ||||||||||||||||||||||| ||||||||| Sbjct: 1934 ctcgccgccgtcctcgagtacctcgccgccgag 1966 Score = 129 bits (65), Expect = 8e-27 Identities = 113/129 (87%) Strand = Plus / Plus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 380 ||||||| ||||| ||||| |||||||||||||||||| |||||||| | || | |||| Sbjct: 2066 tggagcttgccggcaacgcagccaaggacaacaagaagacccgcatcatcccgcgccacc 2125 Query: 381 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 440 |||| |||||||| | ||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 2126 tgctgctcgccgtccgcaacgaccaggagctcggcaggctgcttgccggcgtcaccatcg 2185 Query: 441 cgcacggcg 449 | ||||||| Sbjct: 2186 cccacggcg 2194
>gb|L75802.1|WHTHIH2A Triticum aestivum histone H2A gene, complete cds Length = 2546 Score = 200 bits (101), Expect = 3e-48 Identities = 140/153 (91%) Strand = Plus / Plus Query: 164 aggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatc 223 ||||||||| ||||||| |||| || ||||||||||||||||||||||||||||||||| Sbjct: 1814 aggaagaaggcggtgaccaggtccgtgaaggccgggctccagttccccgtcggccgcatc 1873 Query: 224 gggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctac 283 ||||| ||||||||||||||||| ||||| ||||| ||||| | ||||||||||||||| Sbjct: 1874 gggcgctacctcaagaagggccgctacgcccagcgcatcggctccggcgcccccgtctac 1933 Query: 284 ctcgccgccgtcctcgagtacctggccgccgag 316 ||||||||||||||||||||||| ||||||||| Sbjct: 1934 ctcgccgccgtcctcgagtacctcgccgccgag 1966 Score = 129 bits (65), Expect = 8e-27 Identities = 113/129 (87%) Strand = Plus / Plus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 380 ||||||| ||||| ||||| |||||||||||||||||| |||||||| | || | |||| Sbjct: 2066 tggagcttgccggcaacgcagccaaggacaacaagaagacccgcatcatcccgcgccacc 2125 Query: 381 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 440 |||| |||||||| | ||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 2126 tgctgctcgccgtccgcaacgaccaggagctcggcaggctgcttgccggcgtcaccatcg 2185 Query: 441 cgcacggcg 449 | ||||||| Sbjct: 2186 cccacggcg 2194
>gb|BT017719.1| Zea mays clone EL01N0447A04.c mRNA sequence Length = 772 Score = 190 bits (96), Expect = 3e-45 Identities = 246/296 (83%) Strand = Plus / Plus Query: 154 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 213 ||||||||||| || |||| ||||| ||||||| || ||||||||||||| |||||||| Sbjct: 113 cggcgggccgaagaggaagccggtgtcgcggtcagttaaggccgggctccttttccccgt 172 Query: 214 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 273 ||||||||||| |||||||| ||||| || ||||||||| ||||||| ||||||||||| Sbjct: 173 gggccgcatcggacggtacctgaagaaagggcggtacgcgcagcgcgtgggcacgggcgc 232 Query: 274 ccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgg 333 ||||| | ||| |||||||||||||||||||| ||||| ||| | ||||||| || || Sbjct: 233 tcccgtgttcctggccgccgtcctcgagtacctcgccgctgaggtcctggagctggctgg 292 Query: 334 gaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgt 393 ||||| || ||||||||||| |||||||| | || | ||||| ||||||||| | Sbjct: 293 caacgcggcgcgcgacaacaagaaaacccgcatcatcccgcgccacctcctcctcgccat 352 Query: 394 gaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcg 449 | |||||| |||||||||| | |||||||| || ||||||||||||||||||| Sbjct: 353 ccgcaacgacgaggagctcggcaagctgctgggtggggtcaccatcgcgcacggcg 408
>dbj|AK121752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087P07, full insert sequence Length = 747 Score = 190 bits (96), Expect = 3e-45 Identities = 228/272 (83%) Strand = Plus / Plus Query: 170 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 229 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| || Sbjct: 159 aagtcggtgtcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccagg 218 Query: 230 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgcc 289 ||||||||| ||| |||||| ||||||||||| | |||||||||||||||||| || Sbjct: 219 tacctcaaggccggcaagtacgccgagcgcgtcggcgccggcgcccccgtctacctctcc 278 Query: 290 gccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggac 349 ||||||||||||||||| ||||||||| || ||||||| || |||||||| || | |||| Sbjct: 279 gccgtcctcgagtacctcgccgccgaggtgctggagctggcggggaacgcggcgagggac 338 Query: 350 aacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgaggaacgaccaggag 409 ||||||||| ||| |||||||| |||||| | | || || ||| | |||||| ||||| Sbjct: 339 aacaagaagaaccggatcgtgccgaggcacatccagctggcggtgcgcaacgacgaggag 398 Query: 410 ctcgggaggctgctggccggcgtcaccatcgc 441 || | |||||||| | || |||||||||||| Sbjct: 399 ctgagcaggctgctcggcgccgtcaccatcgc 430
>dbj|AK064299.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A07, full insert sequence Length = 724 Score = 182 bits (92), Expect = 7e-43 Identities = 149/168 (88%) Strand = Plus / Plus Query: 191 aaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggtac 250 |||||||||||||||||||||||||||||||||| || ||||||||| ||| |||| Sbjct: 177 aaggccgggctccagttccccgtcggccgcatcgcccgctacctcaaggccggcaagtac 236 Query: 251 gcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggcc 310 ||| ||||||||||| | |||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 237 gcggagcgcgtcggcgccggcgcccccgtctacctctccgccgtcctcgagtacctcgcc 296 Query: 311 gccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 |||||| || ||||||| ||||||||||| || | ||||||||||||| Sbjct: 297 gccgaggtgctggagctggccgggaacgcggcgagggacaacaagaag 344
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02, complete sequence Length = 93826 Score = 180 bits (91), Expect = 3e-42 Identities = 145/163 (88%) Strand = Plus / Minus Query: 154 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 213 ||||||||||| ||||||| ||||| | || || |||||||||||||||||||||||||| Sbjct: 7789 cggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgt 7730 Query: 214 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 273 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 7729 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 7670 Query: 274 ccccgtctacctcgccgccgtcctcgagtacctggccgccgag 316 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 7669 ccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 7627 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 398 aacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcg 449 |||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 7469 aacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcg 7418
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 180 bits (91), Expect = 3e-42 Identities = 145/163 (88%) Strand = Plus / Minus Query: 154 cggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgt 213 ||||||||||| ||||||| ||||| | || || |||||||||||||||||||||||||| Sbjct: 102146 cggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccagttccccgt 102087 Query: 214 cggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgc 273 |||||| ||||| || ||||||||| | ||||| ||| | ||||| ||||||| ||||| Sbjct: 102086 cggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggcaccggcgc 102027 Query: 274 ccccgtctacctcgccgccgtcctcgagtacctggccgccgag 316 ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 102026 ccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 101984 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 398 aacgaccaggagctcgggaggctgctggccggcgtcaccatcgcgcacggcg 449 |||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 101826 aacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcg 101775
>ref|XM_482492.1| Oryza sativa (japonica cultivar-group), mRNA Length = 405 Score = 163 bits (82), Expect = 6e-37 Identities = 187/222 (84%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||||||||||||||||||| | |||| || | ||||||| ||| ||| Sbjct: 63 caaggccgggctccagttccccgtcggcaggatcgcccgcttcctcaaggccggcaagta 122 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||| || Sbjct: 123 cgccgagcgcgtcggcgccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 182 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 ||||||| | | ||||||||||||||||| || ||||||||||||| | || ||||| Sbjct: 183 cgccgaggttcttgagctcgccgggaacgcggcgcgggacaacaagaagacgcggatcgt 242 Query: 370 gcccaggcacctgctcctcgccgtgaggaacgaccaggagct 411 ||| |||||| | | ||||||||| | |||||| ||||||| Sbjct: 243 gccgaggcacatccagctcgccgtgcgcaacgacgaggagct 284
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 159 bits (80), Expect = 9e-36 Identities = 131/148 (88%) Strand = Plus / Plus Query: 169 gaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcg 228 |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 38059 gaaggcggtgtcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccg 38118 Query: 229 gtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgc 288 ||||||||| ||| ||||||| ||||||||||| | |||||||||||||||||| | Sbjct: 38119 ctacctcaaggccggcaagtacgcggagcgcgtcggcgccggcgcccccgtctacctctc 38178 Query: 289 cgccgtcctcgagtacctggccgccgag 316 |||||||||||||||||| ||||||||| Sbjct: 38179 cgccgtcctcgagtacctcgccgccgag 38206 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||| ||||||||||| || | ||||||||||||| Sbjct: 38315 tggagctggccgggaacgcggcgagggacaacaagaag 38352
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 159 bits (80), Expect = 9e-36 Identities = 131/148 (88%) Strand = Plus / Minus Query: 169 gaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcg 228 |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 141373 gaaggcggtgtcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccg 141314 Query: 229 gtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgc 288 ||||||||| ||| ||||||| ||||||||||| | |||||||||||||||||| | Sbjct: 141313 ctacctcaaggccggcaagtacgcggagcgcgtcggcgccggcgcccccgtctacctctc 141254 Query: 289 cgccgtcctcgagtacctggccgccgag 316 |||||||||||||||||| ||||||||| Sbjct: 141253 cgccgtcctcgagtacctcgccgccgag 141226 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||| ||||||||||| || | ||||||||||||| Sbjct: 141117 tggagctggccgggaacgcggcgagggacaacaagaag 141080
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 159 bits (80), Expect = 9e-36 Identities = 131/148 (88%) Strand = Plus / Plus Query: 169 gaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcg 228 |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 181213 gaaggcggtgtcgcggtcgtccaaggccgggctccagttccccgtcggccgcatcgcccg 181272 Query: 229 gtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgc 288 ||||||||| ||| ||||||| ||||||||||| | |||||||||||||||||| | Sbjct: 181273 ctacctcaaggccggcaagtacgcggagcgcgtcggcgccggcgcccccgtctacctctc 181332 Query: 289 cgccgtcctcgagtacctggccgccgag 316 |||||||||||||||||| ||||||||| Sbjct: 181333 cgccgtcctcgagtacctcgccgccgag 181360 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||| ||||||||||| || | ||||||||||||| Sbjct: 181469 tggagctggccgggaacgcggcgagggacaacaagaag 181506
>gb|BT016301.1| Zea mays clone Contig134 mRNA sequence Length = 846 Score = 157 bits (79), Expect = 4e-35 Identities = 214/259 (82%) Strand = Plus / Plus Query: 191 aaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggtac 250 |||||||| |||||||||||||| ||||| ||||| || ||||||||| |||| || ||| Sbjct: 98 aaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgctac 157 Query: 251 gcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggcc 310 | |||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 158 tcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgcc 217 Query: 311 gccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtg 370 |||||||| | ||| | || |||||||| || ||||||||||||| ||| ||| | Sbjct: 218 gccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatcatc 277 Query: 371 cccaggcacctgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggc 430 || ||||| | || || || | | |||||| |||||||||||| ||| ||||||||| Sbjct: 278 ccgcggcacgtactgctggcgatccgcaacgacgaggagctcgggaagctactggccggc 337 Query: 431 gtcaccatcgcgcacggcg 449 ||||||||||| ||||||| Sbjct: 338 gtcaccatcgcacacggcg 356
>dbj|AK071511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096P04, full insert sequence Length = 824 Score = 157 bits (79), Expect = 4e-35 Identities = 157/183 (85%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||| |||||||||||||| | |||| ||| ||||||| ||| ||| Sbjct: 178 caaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaagta 237 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||| || Sbjct: 238 cgccgagcgcgtcggcgccggcgctcccgtctacctcgccgccgtcctcgagtacctcgc 297 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 ||||||| || ||||||||||||||||||| || | ||||||||||||| ||||||| || Sbjct: 298 cgccgaggtgctggagctcgccgggaacgcggcgagggacaacaagaagacccgcattgt 357 Query: 370 gcc 372 ||| Sbjct: 358 gcc 360
>dbj|AK058913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-A01, full insert sequence Length = 733 Score = 157 bits (79), Expect = 4e-35 Identities = 157/183 (85%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||| |||||||||||||| | |||| ||| ||||||| ||| ||| Sbjct: 177 caaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaagta 236 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||| || Sbjct: 237 cgccgagcgcgtcggcgccggcgctcccgtctacctcgccgccgtcctcgagtacctcgc 296 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 ||||||| || ||||||||||||||||||| || | ||||||||||||| ||||||| || Sbjct: 297 cgccgaggtgctggagctcgccgggaacgcggcgagggacaacaagaagacccgcattgt 356 Query: 370 gcc 372 ||| Sbjct: 357 gcc 359
>gb|AY389588.1| Hyacinthus orientalis histone H2A mRNA, complete cds Length = 643 Score = 151 bits (76), Expect = 2e-33 Identities = 226/276 (81%) Strand = Plus / Plus Query: 127 gaagaagggcgcggcgggccgcaaggccggcgggccgaggaagaagtcggtgacgcggtc 186 |||||||||||| | || ||||||| |||||| ||||||||||| |||||| | || || Sbjct: 51 gaagaagggcgccggcggacgcaagggcggcggcccgaggaagaaatcggtgtctcgatc 110 Query: 187 ggtcaaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccg 246 |||||||||||||||||||||||||| ||||| |||| || ||| | ||||||||| | Sbjct: 111 cgtcaaggccgggctccagttccccgttggccgtctcggccgatacttgaagaagggcag 170 Query: 247 gtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacct 306 |||||| |||| |||||||| || || || |||||||||||||||||| | |||||||| Sbjct: 171 gtacgctcagcgtgtcggcaccggagctccggtctacctcgccgccgtcttggagtacct 230 Query: 307 ggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcat 366 || || ||| | |||||| | ||||| ||||| || | |||||| |||||| || || Sbjct: 231 cgctgctgaggtattggagttggccggaaacgcggcgagggacaataagaagaatcggat 290 Query: 367 cgtgcccaggcacctgctcctcgccgtgaggaacga 402 | | ||||||||| |||| || || ||||||||||| Sbjct: 291 catacccaggcacgtgctgctggcagtgaggaacga 326
>ref|XM_478632.1| Oryza sativa (japonica cultivar-group), mRNA Length = 823 Score = 149 bits (75), Expect = 9e-33 Identities = 156/183 (85%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||| ||||||||||| ||| | |||| | ||| ||||||| || ||| Sbjct: 212 caaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaagta 271 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||||||||| | || ||||||||||||||||||||||||||||||||||| || Sbjct: 272 cgccgagcgcgtcggcgccggggcccccgtctacctcgccgccgtcctcgagtacctcgc 331 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 ||| ||| || | ||||||||||||||||| || | ||||||||||||| |||||||||| Sbjct: 332 cgctgaggtgctcgagctcgccgggaacgcggcgagggacaacaagaagacccgcatcgt 391 Query: 370 gcc 372 ||| Sbjct: 392 gcc 394
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 149 bits (75), Expect = 9e-33 Identities = 129/147 (87%) Strand = Plus / Minus Query: 170 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 229 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| || Sbjct: 20924851 aagtcggtgtcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccagg 20924792 Query: 230 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgcc 289 ||||||||| ||| |||||| ||||||||||| | |||||||||||||||||| || Sbjct: 20924791 tacctcaaggccggcaagtacgccgagcgcgtcggcgccggcgcccccgtctacctctcc 20924732 Query: 290 gccgtcctcgagtacctggccgccgag 316 ||||||||||||||||| ||||||||| Sbjct: 20924731 gccgtcctcgagtacctcgccgccgag 20924705 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||| |||||||||||||| | |||| ||| ||||||| ||| ||| Sbjct: 14469028 caaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaagta 14468969 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||| || Sbjct: 14468968 cgccgagcgcgtcggcgccggcgctcccgtctacctcgccgccgtcctcgagtacctcgc 14468909 Query: 310 cgccgag 316 ||||||| Sbjct: 14468908 cgccgag 14468902 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcc 372 ||||||||||||||||||| || | ||||||||||||| ||||||| ||||| Sbjct: 14468694 tggagctcgccgggaacgcggcgagggacaacaagaagacccgcattgtgcc 14468643 Score = 50.1 bits (25), Expect = 0.006 Identities = 97/121 (80%) Strand = Plus / Minus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 380 ||||||| || |||||||| || | ||||||||||||| ||| |||||||| |||||| Sbjct: 20924602 tggagctggcggggaacgcggcgagggacaacaagaagaaccggatcgtgccgaggcaca 20924543 Query: 381 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 440 | | || || ||| | |||||| ||||||| | |||||||| | || ||||||||||| Sbjct: 20924542 tccagctggcggtgcgcaacgacgaggagctgagcaggctgctcggcgccgtcaccatcg 20924483 Query: 441 c 441 | Sbjct: 20924482 c 20924482
>dbj|AK099888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112I10, full insert sequence Length = 823 Score = 149 bits (75), Expect = 9e-33 Identities = 156/183 (85%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||| ||||||||||| ||| | |||| | ||| ||||||| || ||| Sbjct: 212 caaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaagta 271 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||||||||| | || ||||||||||||||||||||||||||||||||||| || Sbjct: 272 cgccgagcgcgtcggcgccggggcccccgtctacctcgccgccgtcctcgagtacctcgc 331 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 ||| ||| || | ||||||||||||||||| || | ||||||||||||| |||||||||| Sbjct: 332 cgctgaggtgctcgagctcgccgggaacgcggcgagggacaacaagaagacccgcatcgt 391 Query: 370 gcc 372 ||| Sbjct: 392 gcc 394
>dbj|AK058540.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-B06, full insert sequence Length = 1718 Score = 149 bits (75), Expect = 9e-33 Identities = 156/183 (85%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||| ||||||||||| ||| | |||| | ||| ||||||| || ||| Sbjct: 213 caaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaagta 272 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||||||||| | || ||||||||||||||||||||||||||||||||||| || Sbjct: 273 cgccgagcgcgtcggcgccggggcccccgtctacctcgccgccgtcctcgagtacctcgc 332 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 ||| ||| || | ||||||||||||||||| || | ||||||||||||| |||||||||| Sbjct: 333 cgctgaggtgctcgagctcgccgggaacgcggcgagggacaacaagaagacccgcatcgt 392 Query: 370 gcc 372 ||| Sbjct: 393 gcc 395
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 149 bits (75), Expect = 9e-33 Identities = 129/147 (87%) Strand = Plus / Minus Query: 170 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 229 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| || Sbjct: 20851065 aagtcggtgtcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccagg 20851006 Query: 230 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgcc 289 ||||||||| ||| |||||| ||||||||||| | |||||||||||||||||| || Sbjct: 20851005 tacctcaaggccggcaagtacgccgagcgcgtcggcgccggcgcccccgtctacctctcc 20850946 Query: 290 gccgtcctcgagtacctggccgccgag 316 ||||||||||||||||| ||||||||| Sbjct: 20850945 gccgtcctcgagtacctcgccgccgag 20850919 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||| |||||||||||||| | |||| ||| ||||||| ||| ||| Sbjct: 14423312 caaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaagta 14423253 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||| || Sbjct: 14423252 cgccgagcgcgtcggcgccggcgctcccgtctacctcgccgccgtcctcgagtacctcgc 14423193 Query: 310 cgccgag 316 ||||||| Sbjct: 14423192 cgccgag 14423186 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcc 372 ||||||||||||||||||| || | ||||||||||||| ||||||| ||||| Sbjct: 14422978 tggagctcgccgggaacgcggcgagggacaacaagaagacccgcattgtgcc 14422927 Score = 50.1 bits (25), Expect = 0.006 Identities = 97/121 (80%) Strand = Plus / Minus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 380 ||||||| || |||||||| || | ||||||||||||| ||| |||||||| |||||| Sbjct: 20850816 tggagctggcggggaacgcggcgagggacaacaagaagaaccggatcgtgccgaggcaca 20850757 Query: 381 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 440 | | || || ||| | |||||| ||||||| | |||||||| | || ||||||||||| Sbjct: 20850756 tccagctggcggtgcgcaacgacgaggagctgagcaggctgctcggcgccgtcaccatcg 20850697 Query: 441 c 441 | Sbjct: 20850696 c 20850696
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 149 bits (75), Expect = 9e-33 Identities = 129/147 (87%) Strand = Plus / Minus Query: 170 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 229 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| || Sbjct: 10341 aagtcggtgtcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccagg 10282 Query: 230 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgcc 289 ||||||||| ||| |||||| ||||||||||| | |||||||||||||||||| || Sbjct: 10281 tacctcaaggccggcaagtacgccgagcgcgtcggcgccggcgcccccgtctacctctcc 10222 Query: 290 gccgtcctcgagtacctggccgccgag 316 ||||||||||||||||| ||||||||| Sbjct: 10221 gccgtcctcgagtacctcgccgccgag 10195 Score = 50.1 bits (25), Expect = 0.006 Identities = 97/121 (80%) Strand = Plus / Minus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 380 ||||||| || |||||||| || | ||||||||||||| ||| |||||||| |||||| Sbjct: 10092 tggagctggcggggaacgcggcgagggacaacaagaagaaccggatcgtgccgaggcaca 10033 Query: 381 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 440 | | || || ||| | |||||| ||||||| | |||||||| | || ||||||||||| Sbjct: 10032 tccagctggcggtgcgcaacgacgaggagctgagcaggctgctcggcgccgtcaccatcg 9973 Query: 441 c 441 | Sbjct: 9972 c 9972
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 149 bits (75), Expect = 9e-33 Identities = 129/147 (87%) Strand = Plus / Plus Query: 170 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 229 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| || Sbjct: 34144 aagtcggtgtcgcggtcgtccaaggccggcctccagttccccgtcggccgcatcgccagg 34203 Query: 230 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgcc 289 ||||||||| ||| |||||| ||||||||||| | |||||||||||||||||| || Sbjct: 34204 tacctcaaggccggcaagtacgccgagcgcgtcggcgccggcgcccccgtctacctctcc 34263 Query: 290 gccgtcctcgagtacctggccgccgag 316 ||||||||||||||||| ||||||||| Sbjct: 34264 gccgtcctcgagtacctcgccgccgag 34290 Score = 50.1 bits (25), Expect = 0.006 Identities = 97/121 (80%) Strand = Plus / Plus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacc 380 ||||||| || |||||||| || | ||||||||||||| ||| |||||||| |||||| Sbjct: 34393 tggagctggcggggaacgcggcgagggacaacaagaagaaccggatcgtgccgaggcaca 34452 Query: 381 tgctcctcgccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcg 440 | | || || ||| | |||||| ||||||| | |||||||| | || ||||||||||| Sbjct: 34453 tccagctggcggtgcgcaacgacgaggagctgagcaggctgctcggcgccgtcaccatcg 34512 Query: 441 c 441 | Sbjct: 34513 c 34513
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 135 bits (68), Expect = 1e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 149 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 208 |||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||| Sbjct: 7800461 aaggccggcgggccgaggaagaaggcggtgacacgctccgtcaaggccgggctccagttc 7800520 Query: 209 cccgtcggccgcatcgggcggtacctcaagaa 240 ||||||||||| |||||||| ||||||||||| Sbjct: 7800521 cccgtcggccgtatcgggcgctacctcaagaa 7800552
>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0431E05 Length = 146091 Score = 135 bits (68), Expect = 1e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 149 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 208 |||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||| Sbjct: 14843 aaggccggcgggccgaggaagaaggcggtgacacgctccgtcaaggccgggctccagttc 14902 Query: 209 cccgtcggccgcatcgggcggtacctcaagaa 240 ||||||||||| |||||||| ||||||||||| Sbjct: 14903 cccgtcggccgtatcgggcgctacctcaagaa 14934
>dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0091G06 Length = 161851 Score = 135 bits (68), Expect = 1e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 149 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 208 |||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||| Sbjct: 112959 aaggccggcgggccgaggaagaaggcggtgacacgctccgtcaaggccgggctccagttc 113018 Query: 209 cccgtcggccgcatcgggcggtacctcaagaa 240 ||||||||||| |||||||| ||||||||||| Sbjct: 113019 cccgtcggccgtatcgggcgctacctcaagaa 113050
>gb|AY104486.1| Zea mays PCO109435 mRNA sequence Length = 992 Score = 135 bits (68), Expect = 1e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 191 aaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggtac 250 |||||||| |||||||||||||| ||||| ||||| || ||||||||| |||| || ||| Sbjct: 169 aaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcagggtcgctac 228 Query: 251 gcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggcc 310 | |||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 229 tcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgcc 288 Query: 311 gccgagct 318 |||||||| Sbjct: 289 gccgagct 296 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 405 aggagctcgggaggctgctggccggcgtcaccatcgcgcacggcg 449 |||||||||||| ||| |||||||||||||||||||| ||||||| Sbjct: 383 aggagctcgggaagctactggccggcgtcaccatcgcacacggcg 427
>gb|BT016168.1| Zea mays clone Contig1 mRNA sequence Length = 676 Score = 133 bits (67), Expect = 5e-28 Identities = 169/203 (83%) Strand = Plus / Plus Query: 170 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 229 ||||||||| ||||||| |||||| ||||| |||||||||||||| ||||||| |||| Sbjct: 141 aagtcggtgtcgcggtcctccaaggctgggcttcagttccccgtcggtcgcatcgcgcgg 200 Query: 230 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgcc 289 ||||||||| || ||| ||| ||||||||||| | || |||||||| |||||| || Sbjct: 201 tacctcaaggccgggaagtatgcggagcgcgtcggcgccggggcccccgtgtacctctcc 260 Query: 290 gccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggac 349 ||||| |||||||| || ||||||||| || ||||||| ||||||||||| || |||| Sbjct: 261 gccgttctcgagtatctcgccgccgaggtgctggagctggccgggaacgctgctcgggac 320 Query: 350 aacaagaagtcccgcatcgtgcc 372 ||||||||| ||| |||||||| Sbjct: 321 aacaagaagaaccgtatcgtgcc 343
>gb|AY104828.1| Zea mays PCO072413 mRNA sequence Length = 741 Score = 133 bits (67), Expect = 5e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 ||||||||| |||||||||||||||||| | || | ||| ||||||| |||| ||| Sbjct: 120 caaggccggactccagttccccgtcggcaggattgccaggttcctcaaggcgggcaagta 179 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 |||| ||||||||||| | ||||||||||| |||||||||||||||||||||||||| || Sbjct: 180 cgcggagcgcgtcggcgccggcgcccccgtgtacctcgccgccgtcctcgagtacctcgc 239 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 || ||| | | || || |||||||||||||| | ||||||||||||| ||||||| || Sbjct: 240 ggctgaggttctcgaacttgccgggaacgccgcgagggacaacaagaagacccgcattgt 299 Query: 370 gcc 372 ||| Sbjct: 300 gcc 302
>gb|AY105006.1| Zea mays PCO108932 mRNA sequence Length = 841 Score = 133 bits (67), Expect = 5e-28 Identities = 169/203 (83%) Strand = Plus / Plus Query: 170 aagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcgg 229 ||||||||| ||||||| |||||| ||||| |||||||||||||| ||||||| |||| Sbjct: 129 aagtcggtgtcgcggtcctccaaggctgggcttcagttccccgtcggtcgcatcgcgcgg 188 Query: 230 tacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgcc 289 ||||||||| || ||| ||| ||||||||||| | || |||||||| |||||| || Sbjct: 189 tacctcaaggccgggaagtatgcggagcgcgtcggcgccggggcccccgtgtacctctcc 248 Query: 290 gccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggac 349 ||||| |||||||| || ||||||||| || ||||||| ||||||||||| || |||| Sbjct: 249 gccgttctcgagtatctcgccgccgaggtgctggagctggccgggaacgctgctcgggac 308 Query: 350 aacaagaagtcccgcatcgtgcc 372 ||||||||| ||| |||||||| Sbjct: 309 aacaagaagaaccgtatcgtgcc 331
>dbj|D38091.1|WHTPH2AE Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-10 Length = 691 Score = 133 bits (67), Expect = 5e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||||||||||||||||||| | |||| ||||| ||||||| ||| ||| Sbjct: 147 caaggccgggctccagttccccgtcggcaggatcgcgcggttcctcaaggccggcaagta 206 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| || | |||||| | |||||||||||||||||||||||||| || ||||| || || Sbjct: 207 cgccgagagggtcggcgccggcgcccccgtctacctcgccgccgtgctggagtatctcgc 266 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 ||| ||| | ||||| | ||||||||||| || | ||||||||||||| |||||||||| Sbjct: 267 cgctgaggttctggagttggccgggaacgcggcgagggacaacaagaagacccgcatcgt 326 Query: 370 gcc 372 ||| Sbjct: 327 gcc 329
>dbj|D38089.1|WHTPH2AC Triticum aestivum mRNA for protein H2A, complete cds, clone wcH2A-4 Length = 725 Score = 133 bits (67), Expect = 5e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||||||||||||||||||| | |||| ||||| ||||||| ||| ||| Sbjct: 145 caaggccgggctccagttccccgtcggcaggatcgcgcggttcctcaaggccggcaagta 204 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| || | |||||| | |||||||||||||||||||||||||| || ||||| || || Sbjct: 205 cgccgagagggtcggcgccggcgcccccgtctacctcgccgccgtgctggagtatctcgc 264 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 ||| ||| | ||||| | ||||||||||| || | ||||||||||||| |||||||||| Sbjct: 265 cgctgaggttctggagttggccgggaacgcggcgagggacaacaagaagacccgcatcgt 324 Query: 370 gcc 372 ||| Sbjct: 325 gcc 327
>gb|AY389592.1| Hyacinthus orientalis histone H2A mRNA, complete cds Length = 635 Score = 129 bits (65), Expect = 8e-27 Identities = 176/213 (82%) Strand = Plus / Plus Query: 146 cgcaaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccag 205 ||||||| |||||| ||||||||||| ||||| | || || ||||||||||| |||||| Sbjct: 55 cgcaagggcggcggcccgaggaagaaatcggtctctcgctcagtcaaggccggcctccag 114 Query: 206 ttccccgtcggccgcatcgggcggtacctcaagaagggccggtacgcgaagcgcgtcggc 265 ||||||||||| || |||| || ||| | ||||||||| ||||||| |||| ||||| Sbjct: 115 ttccccgtcggtcgtctcggccgatacttgaagaagggcaggtacgctcagcgtgtcggt 174 Query: 266 acgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggag 325 || || || || |||||||| |||||||||||||||||||| ||||| ||| | |||||| Sbjct: 175 accggagctccggtctaccttgccgccgtcctcgagtacctagccgcagaggtattggag 234 Query: 326 ctcgccgggaacgccgccaaggacaacaagaag 358 | ||||| ||||| || | |||||||||||| Sbjct: 235 ttggccggaaacgcggcgagagacaacaagaag 267
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 125 bits (63), Expect = 1e-25 Identities = 111/127 (87%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||||||||||||||||||| | |||| || | ||||||| ||| ||| Sbjct: 20566122 caaggccgggctccagttccccgtcggcaggatcgcccgcttcctcaaggccggcaagta 20566181 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||| || Sbjct: 20566182 cgccgagcgcgtcggcgccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 20566241 Query: 310 cgccgag 316 ||||||| Sbjct: 20566242 cgccgag 20566248 Score = 85.7 bits (43), Expect = 1e-13 Identities = 120/147 (81%), Gaps = 9/147 (6%) Strand = Plus / Minus Query: 166 gaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgg 225 ||||||| ||||| | || || |||||||||||||||||||||| ||| ||||| Sbjct: 11503554 gaagaagccggtgccacgctccgtcaaggccgggctccagttcctcgtaagccgc----- 11503500 Query: 226 gcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 285 |||||| |||| |||||| ||||| | ||||||||||| ||| ||||||||||||| Sbjct: 11503499 ----tacctcgagaacggccggcacgcgcaacgcgtcggcactggcacccccgtctacct 11503444 Query: 286 cgccgccgtcctcgagtacctggccgc 312 ||| |||||||||| |||||| ||||| Sbjct: 11503443 cgctgccgtcctcgggtaccttgccgc 11503417 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 323 gagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctg 382 ||||||||||||||||| || ||||||||||||| | || |||||||| |||||| | Sbjct: 20566352 gagctcgccgggaacgcggcgcgggacaacaagaagacgcggatcgtgccgaggcacatc 20566411 Query: 383 ctcctcgccgtgaggaacgaccaggagct 411 | ||||||||| | |||||| ||||||| Sbjct: 20566412 cagctcgccgtgcgcaacgacgaggagct 20566440 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 tggagctcgccgggaacgcc 340 |||||||||||||||||||| Sbjct: 17645364 tggagctcgccgggaacgcc 17645345
>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15 Length = 120419 Score = 125 bits (63), Expect = 1e-25 Identities = 111/127 (87%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||||||||||||||||||| | |||| || | ||||||| ||| ||| Sbjct: 70083 caaggccgggctccagttccccgtcggcaggatcgcccgcttcctcaaggccggcaagta 70142 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||| || Sbjct: 70143 cgccgagcgcgtcggcgccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 70202 Query: 310 cgccgag 316 ||||||| Sbjct: 70203 cgccgag 70209 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 323 gagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctg 382 ||||||||||||||||| || ||||||||||||| | || |||||||| |||||| | Sbjct: 70313 gagctcgccgggaacgcggcgcgggacaacaagaagacgcggatcgtgccgaggcacatc 70372 Query: 383 ctcctcgccgtgaggaacgaccaggagct 411 | ||||||||| | |||||| ||||||| Sbjct: 70373 cagctcgccgtgcgcaacgacgaggagct 70401
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 125 bits (63), Expect = 1e-25 Identities = 111/127 (87%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||||||||||||||||||| | |||| || | ||||||| ||| ||| Sbjct: 40494 caaggccgggctccagttccccgtcggcaggatcgcccgcttcctcaaggccggcaagta 40553 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||| || Sbjct: 40554 cgccgagcgcgtcggcgccggcgcccccgtctacctcgccgccgtcctcgagtacctcgc 40613 Query: 310 cgccgag 316 ||||||| Sbjct: 40614 cgccgag 40620 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 323 gagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctg 382 ||||||||||||||||| || ||||||||||||| | || |||||||| |||||| | Sbjct: 40724 gagctcgccgggaacgcggcgcgggacaacaagaagacgcggatcgtgccgaggcacatc 40783 Query: 383 ctcctcgccgtgaggaacgaccaggagct 411 | ||||||||| | |||||| ||||||| Sbjct: 40784 cagctcgccgtgcgcaacgacgaggagct 40812
>ref|XM_478633.1| Oryza sativa (japonica cultivar-group), mRNA Length = 830 Score = 119 bits (60), Expect = 8e-24 Identities = 153/184 (83%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||||||||||||||| ||| | |||| |||| | | ||| ||| ||| Sbjct: 218 caaggccgggctccagttccccgtgggcaggatcgcccggttcttgaaggccggcaagta 277 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| || | |||||| | |||||||| ||||||||||||||||||||||||||||| || Sbjct: 278 cgccgagagggtcggcgccggcgccccggtctacctcgccgccgtcctcgagtacctcgc 337 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 ||| ||| | | ||||||||||||||||| || | ||||||||||||| ||||||| || Sbjct: 338 cgctgaggttcttgagctcgccgggaacgcggcgagggacaacaagaagacccgcatagt 397 Query: 370 gccc 373 |||| Sbjct: 398 gccc 401
>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09, complete sequence Length = 106057 Score = 119 bits (60), Expect = 8e-24 Identities = 85/92 (92%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 149 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 208 ||||||||||||| |||||||||| |||||||||| || ||||||||||||||||| ||| Sbjct: 36427 aaggccggcgggc-gaggaagaaggcggtgacgcgctccgtcaaggccgggctccaattc 36485 Query: 209 cccgtcggccgcatcgggcggtacctcaagaa 240 ||||||||||| |||||||| ||||||||||| Sbjct: 36486 cccgtcggccgtatcgggcgctacctcaagaa 36517
>dbj|AK059228.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D11, full insert sequence Length = 830 Score = 119 bits (60), Expect = 8e-24 Identities = 153/184 (83%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||||||||||||||| ||| | |||| |||| | | ||| ||| ||| Sbjct: 218 caaggccgggctccagttccccgtgggcaggatcgcccggttcttgaaggccggcaagta 277 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| || | |||||| | |||||||| ||||||||||||||||||||||||||||| || Sbjct: 278 cgccgagagggtcggcgccggcgccccggtctacctcgccgccgtcctcgagtacctcgc 337 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 ||| ||| | | ||||||||||||||||| || | ||||||||||||| ||||||| || Sbjct: 338 cgctgaggttcttgagctcgccgggaacgcggcgagggacaacaagaagacccgcatagt 397 Query: 370 gccc 373 |||| Sbjct: 398 gccc 401
>gb|AY110108.1| Zea mays CL14299_1 mRNA sequence Length = 712 Score = 113 bits (57), Expect = 5e-22 Identities = 159/193 (82%) Strand = Plus / Minus Query: 180 cgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgggcggtacctcaaga 239 |||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||| Sbjct: 582 cgcggtcgaccaaggccgggctgcagttccccgtcggccgcatcgcgcgctacctcaagg 523 Query: 240 agggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcg 299 ||| |||||| ||||||||||| || || |||||||||||| |||||||||||| Sbjct: 522 ccggcaagtacgccgagcgcgtcggcggtggtgcgcccgtctacctctccgccgtcctcg 463 Query: 300 agtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagt 359 |||| || || || ||| ||||||| || || || ||||| || |||||||||||| Sbjct: 462 agtatctcgcggcagaggtgttggaactggcgggcaacgcggcgcgcgacaacaagaaga 403 Query: 360 cccgcatcgtgcc 372 |||||||||||| Sbjct: 402 accgcatcgtgcc 390
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 149 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 208 ||||||||| |||| ||||||||| |||||||||| || |||||||||||||||||||| Sbjct: 22313977 aaggccggcaggccaaggaagaaggcggtgacgcgctccgtcaaggccgggctccagttg 22313918 Query: 209 cccgtcggccgcatcgggcggtacctcaagaa 240 |||||| |||| |||||||| ||||||||||| Sbjct: 22313917 cccgtcagccgtatcgggcgctacctcaagaa 22313886 Score = 93.7 bits (47), Expect = 5e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||| ||||||||||| ||| | |||| | ||| ||||||| || ||| Sbjct: 21536451 caaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaagta 21536510 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||||||||| | || ||||||||||||||||||||||||||||||||||| || Sbjct: 21536511 cgccgagcgcgtcggcgccggggcccccgtctacctcgccgccgtcctcgagtacctcgc 21536570 Query: 310 cgc 312 ||| Sbjct: 21536571 cgc 21536573 Score = 77.8 bits (39), Expect = 3e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||||||||||||||| ||| | |||| |||| | | ||| ||| ||| Sbjct: 21539131 caaggccgggctccagttccccgtgggcaggatcgcccggttcttgaaggccggcaagta 21539190 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| || | |||||| | |||||||| ||||||||||||||||||||||||||||| || Sbjct: 21539191 cgccgagagggtcggcgccggcgccccggtctacctcgccgccgtcctcgagtacctcgc 21539250 Query: 310 cgc 312 ||| Sbjct: 21539251 cgc 21539253 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 323 gagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcc 372 ||||||||||||||||| || | ||||||||||||| ||||||||||||| Sbjct: 21536860 gagctcgccgggaacgcggcgagggacaacaagaagacccgcatcgtgcc 21536909 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 323 gagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgccc 373 ||||||||||||||||| || | ||||||||||||| ||||||| |||||| Sbjct: 21539499 gagctcgccgggaacgcggcgagggacaacaagaagacccgcatagtgccc 21539549
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 149 aaggccggcgggccgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttc 208 ||||||||| |||| ||||||||| |||||||||| || |||||||||||||||||||| Sbjct: 119223 aaggccggcaggccaaggaagaaggcggtgacgcgctccgtcaaggccgggctccagttg 119164 Query: 209 cccgtcggccgcatcgggcggtacctcaagaa 240 |||||| |||| |||||||| ||||||||||| Sbjct: 119163 cccgtcagccgtatcgggcgctacctcaagaa 119132
>gb|L41841.1|CREHIH3G Chlamydomonas reinhardtii histone H3, histone H4, histone H2B, and histone H2A genes, complete cds Length = 4358 Score = 111 bits (56), Expect = 2e-21 Identities = 152/184 (82%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 ||||||||| || ||||||||||| |||||||| | ||| ||||| ||||||||| ||| Sbjct: 3860 caaggccggcctgcagttccccgttggccgcattgcgcgctacctgaagaagggcaagta 3919 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||| |||| | ||||| ||||| ||||| ||||| || || ||||||||| | Sbjct: 3920 cgccgagcgcatcggtgccggcgcgcccgtgtacctggccgctgtgctggagtacctgac 3979 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 ||| ||| || ||||||| ||||| ||||||||| |||||||||||| ||||||||| Sbjct: 3980 cgctgaggtgctggagctggccggcaacgccgcccgcgacaacaagaagaaccgcatcgt 4039 Query: 370 gccc 373 |||| Sbjct: 4040 gccc 4043
>gb|U16724.1|CRU16724 Chlamydomonas reinhardtii histone H3 (ch3-II), histone H4 (ch4-II), histone H2B (ch2b-II) and histone H2A (ch2a-II) genes, complete cds Length = 3777 Score = 103 bits (52), Expect = 5e-19 Identities = 151/184 (82%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 ||||||||| || |||||||| || |||||||| | || ||||| ||||||||| ||| Sbjct: 3279 caaggccggcctgcagttccctgtgggccgcattgcacgctacctgaagaagggcaagta 3338 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||| |||| | ||||| ||||| ||||| ||||| || |||||||||||| | Sbjct: 3339 cgccgagcgcatcggtgccggcgcgcccgtgtacctggccgctgtgctcgagtacctgac 3398 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 ||| ||| || ||||||| ||||| ||||||||| |||||||||||| ||||||||| Sbjct: 3399 cgctgaggtgctggagctggccggcaacgccgcccgcgacaacaagaagaaccgcatcgt 3458 Query: 370 gccc 373 |||| Sbjct: 3459 gccc 3462
>gb|AY104826.1| Zea mays PCO099353 mRNA sequence Length = 793 Score = 101 bits (51), Expect = 2e-18 Identities = 150/183 (81%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||| ||||| ||||| ||||||||| | |||| |||| ||||||| ||| ||| Sbjct: 162 caaggctgggctgcagtttcccgtcggcaggatcgctcggttcctcaaggccggcaagta 221 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||||| ||| | |||||||| ||||||||||| || |||||||||||||| || Sbjct: 222 cgccgagcgcgtgggcgccggcgcccctgtctacctcgcagctgtcctcgagtacctcgc 281 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 ||| ||| | ||||||| || |||||||| || | ||| ||||||||| |||||||||| Sbjct: 282 cgctgaggtcctggagcttgctgggaacgcagcgagggataacaagaagacccgcatcgt 341 Query: 370 gcc 372 ||| Sbjct: 342 gcc 344
>emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112_B07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118101 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||| |||||||||||||| | |||| ||| ||||||| ||| ||| Sbjct: 48264 caaggccgggctgcagttccccgtcgggaggatcgccaggttcctcaaggccggcaagta 48323 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||| || Sbjct: 48324 cgccgagcgcgtcggcgccggcgctcccgtctacctcgccgccgtcctcgagtacctcgc 48383 Query: 310 cgccgag 316 ||||||| Sbjct: 48384 cgccgag 48390 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcc 372 ||||||||||||||||||| || | ||||||||||||| ||||||| ||||| Sbjct: 48598 tggagctcgccgggaacgcggcgagggacaacaagaagacccgcattgtgcc 48649
>gb|U16726.1|CRU16726 Chlamydomonas reinhardtii histone H1 (ch1), histone H2A (ch2a-IV), and histone H2B (ch2b-IV) genes, complete cds Length = 4502 Score = 101 bits (51), Expect = 2e-18 Identities = 150/183 (81%) Strand = Plus / Minus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 ||||||||| || |||||||| || |||||||| | ||| ||||| ||||||||| ||| Sbjct: 3415 caaggccggcctgcagttccctgtgggccgcattgcgcgctacctgaagaagggcaagta 3356 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||| |||| | ||||| ||||| ||||| |||||||| || ||||||||| | Sbjct: 3355 cgccgagcgcatcggtgccggcgcgcccgtgtacctggccgccgtgctggagtacctgac 3296 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 ||| ||| || ||||||| ||||| ||||||||| |||||||||||| |||||| || Sbjct: 3295 cgctgaggtgctggagctggccggcaacgccgcccgcgacaacaagaagaaccgcattgt 3236 Query: 370 gcc 372 ||| Sbjct: 3235 gcc 3233
>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1582_D10 Length = 103475 Score = 93.7 bits (47), Expect = 5e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||| ||||||||||| ||| | |||| | ||| ||||||| || ||| Sbjct: 74235 caaggccgggctgcagttccccgttggcaggatcgcgaggttcctcaaggccgggaagta 74294 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||||||||| | || ||||||||||||||||||||||||||||||||||| || Sbjct: 74295 cgccgagcgcgtcggcgccggggcccccgtctacctcgccgccgtcctcgagtacctcgc 74354 Query: 310 cgc 312 ||| Sbjct: 74355 cgc 74357 Score = 77.8 bits (39), Expect = 3e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||||||||||||||| ||| | |||| |||| | | ||| ||| ||| Sbjct: 76915 caaggccgggctccagttccccgtgggcaggatcgcccggttcttgaaggccggcaagta 76974 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| || | |||||| | |||||||| ||||||||||||||||||||||||||||| || Sbjct: 76975 cgccgagagggtcggcgccggcgccccggtctacctcgccgccgtcctcgagtacctcgc 77034 Query: 310 cgc 312 ||| Sbjct: 77035 cgc 77037 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 323 gagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcc 372 ||||||||||||||||| || | ||||||||||||| ||||||||||||| Sbjct: 74644 gagctcgccgggaacgcggcgagggacaacaagaagacccgcatcgtgcc 74693 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 323 gagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgccc 373 ||||||||||||||||| || | ||||||||||||| ||||||| |||||| Sbjct: 77283 gagctcgccgggaacgcggcgagggacaacaagaagacccgcatagtgccc 77333
>gb|U16725.1|CRU16725 Chlamydomonas reinhardtii histone H3 (ch3-III), histone H4 (ch4-III), histone H2B (ch2b-III) and histone H2A (ch2a-III) genes, complete cds Length = 4582 Score = 87.7 bits (44), Expect = 3e-14 Identities = 149/184 (80%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 ||||||||| || |||||||| || |||||||| | ||| ||||| ||||||||| ||| Sbjct: 3158 caaggccggcctgcagttccctgtgggccgcattgcgcgctacctgaagaagggcaagta 3217 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| ||||| |||| | ||||| ||||| ||||| ||||| || || ||||||||| | Sbjct: 3218 cgccgagcgcatcggtgccggcgcgcccgtgtacctggccgctgtgctggagtacctgac 3277 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 ||| ||| || | ||||| ||||| ||||||||| |||||||||||| ||| ||||| Sbjct: 3278 cgctgaggtgctagagctggccggcaacgccgcccgcgacaacaagaagaaccgtatcgt 3337 Query: 370 gccc 373 |||| Sbjct: 3338 gccc 3341
>ref|XM_481315.1| Oryza sativa (japonica cultivar-group), mRNA Length = 936 Score = 85.7 bits (43), Expect = 1e-13 Identities = 120/147 (81%), Gaps = 9/147 (6%) Strand = Plus / Plus Query: 166 gaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgg 225 ||||||| ||||| | || || |||||||||||||||||||||| ||| ||||| Sbjct: 348 gaagaagccggtgccacgctccgtcaaggccgggctccagttcctcgtaagccgc----- 402 Query: 226 gcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 285 |||||| |||| |||||| ||||| | ||||||||||| ||| ||||||||||||| Sbjct: 403 ----tacctcgagaacggccggcacgcgcaacgcgtcggcactggcacccccgtctacct 458 Query: 286 cgccgccgtcctcgagtacctggccgc 312 ||| |||||||||| |||||| ||||| Sbjct: 459 cgctgccgtcctcgggtaccttgccgc 485
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 85.7 bits (43), Expect = 1e-13 Identities = 120/147 (81%), Gaps = 9/147 (6%) Strand = Plus / Minus Query: 166 gaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgg 225 ||||||| ||||| | || || |||||||||||||||||||||| ||| ||||| Sbjct: 57688 gaagaagccggtgccacgctccgtcaaggccgggctccagttcctcgtaagccgc----- 57634 Query: 226 gcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 285 |||||| |||| |||||| ||||| | ||||||||||| ||| ||||||||||||| Sbjct: 57633 ----tacctcgagaacggccggcacgcgcaacgcgtcggcactggcacccccgtctacct 57578 Query: 286 cgccgccgtcctcgagtacctggccgc 312 ||| |||||||||| |||||| ||||| Sbjct: 57577 cgctgccgtcctcgggtaccttgccgc 57551
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 85.7 bits (43), Expect = 1e-13 Identities = 120/147 (81%), Gaps = 9/147 (6%) Strand = Plus / Minus Query: 166 gaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcggccgcatcgg 225 ||||||| ||||| | || || |||||||||||||||||||||| ||| ||||| Sbjct: 117543 gaagaagccggtgccacgctccgtcaaggccgggctccagttcctcgtaagccgc----- 117489 Query: 226 gcggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacct 285 |||||| |||| |||||| ||||| | ||||||||||| ||| ||||||||||||| Sbjct: 117488 ----tacctcgagaacggccggcacgcgcaacgcgtcggcactggcacccccgtctacct 117433 Query: 286 cgccgccgtcctcgagtacctggccgc 312 ||| |||||||||| |||||| ||||| Sbjct: 117432 cgctgccgtcctcgggtaccttgccgc 117406
>gb|AY849374.1| Emiliania huxleyi histone H2A mRNA, complete cds Length = 680 Score = 81.8 bits (41), Expect = 2e-12 Identities = 128/157 (81%) Strand = Plus / Plus Query: 256 gcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccga 315 |||| ||||| |||| || || |||||||| |||||||||||||||||| |||| ||||| Sbjct: 120 gcgcatcggcgcgggagcgccggtctacctggccgccgtcctcgagtacatggcggccga 179 Query: 316 gctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccag 375 | || | |||||||| || |||||||| |||||||||||||| |||||| | ||| | Sbjct: 180 ggtgctcgagctcgcgggcaacgccgcgcgcgacaacaagaagtcgcgcatcattccccg 239 Query: 376 gcacctgctcctcgccgtgaggaacgaccaggagctc 412 |||| | |||||| ||| | |||||| |||||||| Sbjct: 240 gcacatcaccctcgcggtgcgcaacgacgaggagctc 276
>gb|AF255739.1|AF255739 Bufo bufo gagarizans replication-dependent histone H2A gene, complete cds Length = 2120 Score = 81.8 bits (41), Expect = 2e-12 Identities = 140/173 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | ||||| || |||||||| || |||||||| | ||||||| Sbjct: 944 ggcgctcccgtctacttggccgctgtgctcgagtatctcaccgccgagatcctggagctg 1003 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctc 388 ||||| || |||||| |||||||||||| |||||||| | ||| | ||||||| || Sbjct: 1004 gccggcaatgccgcccgcgacaacaagaagacccgcatcatcccccgtcacctgcagctg 1063 Query: 389 gccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgc 441 |||||| | |||||| |||||||| | |||||||| ||||||||||||||| Sbjct: 1064 gccgtgcgcaacgacgaggagctcaacaagctgctgggcggcgtcaccatcgc 1116
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 79.8 bits (40), Expect = 7e-12 Identities = 87/104 (83%), Gaps = 9/104 (8%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 ||||||| ||||||||||||||||||||||| |||||||||||||| || || Sbjct: 7508130 caaggccaggctccagttccccgtcggccgc---------tacctcaagaagggacgcta 7508180 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccg 293 ||| |||||||||||| ||||| ||||||||||||||||||| Sbjct: 7508181 tgcgcagcgcgtcggcatcggcgcacccgtctacctcgccgccg 7508224 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 411 tcgggaggctgctggccggcgtc 433 ||||||||||||||||||||||| Sbjct: 34705627 tcgggaggctgctggccggcgtc 34705649 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 418 gctgctggccggcgtcaccatcgcgca 444 ||||||||| ||||||||||||||||| Sbjct: 7508402 gctgctggctggcgtcaccatcgcgca 7508428
>emb|AL662960.3|OSJN00162 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0021F22, complete sequence Length = 181498 Score = 79.8 bits (40), Expect = 7e-12 Identities = 87/104 (83%), Gaps = 9/104 (8%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 ||||||| ||||||||||||||||||||||| |||||||||||||| || || Sbjct: 30603 caaggccaggctccagttccccgtcggccgc---------tacctcaagaagggacgcta 30653 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccg 293 ||| |||||||||||| ||||| ||||||||||||||||||| Sbjct: 30654 tgcgcagcgcgtcggcatcggcgcacccgtctacctcgccgccg 30697 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 418 gctgctggccggcgtcaccatcgcgca 444 ||||||||| ||||||||||||||||| Sbjct: 30875 gctgctggctggcgtcaccatcgcgca 30901
>gb|BC068823.1| Xenopus laevis cDNA clone IMAGE:6635737, partial cds Length = 763 Score = 77.8 bits (39), Expect = 3e-11 Identities = 111/135 (82%) Strand = Plus / Minus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 |||||||| ||||| || |||||||| ||| |||||||| | ||||| | ||||| ||| Sbjct: 501 gtctacctggccgcggtgctcgagtatctgaccgccgagatcctggagttggccggcaac 442 Query: 338 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgagg 397 || ||| ||| ||||||||| | |||||| | ||||||||||||| ||||||||| | Sbjct: 441 gctgcccgggataacaagaagactcgcatcatccccaggcacctgcagctcgccgtgcgc 382 Query: 398 aacgaccaggagctc 412 |||||| |||||||| Sbjct: 381 aacgacgaggagctc 367
>emb|X94693.1|TAH2A254 T.aestivum histone H2A gene Length = 2241 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgc 312 |||||||||| | ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1230 agcgcgtcggagccggcgcccccgtctacctcgccgccgtccttgagtacctcgccgc 1287 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcc 372 ||||||| ||||| |||||||||| ||||||||||||| |||| |||||||| Sbjct: 1562 tggagctggccggaaacgccgccagggacaacaagaagacccgtatcgtgcc 1613
>emb|AJ245999.1|BNA245999 Brassica napus H2A gene for Histone H2A Length = 971 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 275 cccgtctacctcgccgccgtcctcgagtacctggccgccgag 316 |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 464 cccgtctacctcgccgccgtcctcgagtacctcgccgccgag 505
>gb|L75824.1|WHTHIH2AA Triticum aestivum histone H2A gene, complete cds Length = 2241 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgc 312 |||||||||| | ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1230 agcgcgtcggagccggcgcccccgtctacctcgccgccgtccttgagtacctcgccgc 1287 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 321 tggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcc 372 ||||||| ||||| |||||||||| ||||||||||||| |||| |||||||| Sbjct: 1562 tggagctggccggaaacgccgccagggacaacaagaagacccgtatcgtgcc 1613
>gb|AY108339.1| Zea mays PCO070432 mRNA sequence Length = 811 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 260 gtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctg 319 |||||| | |||||||||||||||||||| ||||| |||||||| || || || ||| | Sbjct: 243 gtcggcgccggcgcccccgtctacctcgctgccgtgctcgagtatcttgctgctgaggtt 302 Query: 320 ttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 | ||||| ||||||||||| || ||||||||||||| |||||||||| Sbjct: 303 ctcgagcttgccgggaacgcggctcgggacaacaagaagacccgcatcgt 352
>emb|CR700361.2|CNS0G3CL Tetraodon nigroviridis full-length cDNA Length = 547 Score = 73.8 bits (37), Expect = 4e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 |||| |||||| | |||||||| |||||||| || ||||| || ||||||||| |||| | Sbjct: 154 agcgtgtcggcgccggcgccccggtctacctggcggccgtgctggagtacctgaccgctg 213 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatcgtgccca 374 || | ||||||| ||||||||||||||| |||||||||||| || | ||| | || Sbjct: 214 agatcctggagctggccgggaacgccgcccgcgacaacaagaagaccaggatcatcccgc 273 Query: 375 ggcacctgctcctcgccgtgaggaacgaccaggagct 411 ||||||||| || |||||| | |||||| ||||||| Sbjct: 274 ggcacctgcagctggccgtgcgcaacgacgaggagct 310
>emb|CR709561.2|CNS0GAG5 Tetraodon nigroviridis full-length cDNA Length = 613 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 248 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 307 |||||| |||| |||||| | || || ||||||||||| || |||||||| ||||| ||| Sbjct: 171 tacgcggagcgagtcggcgccggggcgcccgtctacctggctgccgtcctggagtatctg 230 Query: 308 gccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 |||||||| | ||||| | ||||| |||||||| | |||||||||||| |||||||| Sbjct: 231 accgccgagatcctggagttggccggcaacgccgcaagagacaacaagaagacccgcatc 290
>gb|BC077427.1| Xenopus laevis MGC82198 protein, mRNA (cDNA clone MGC:82198 IMAGE:3402168), complete cds Length = 1591 Score = 69.9 bits (35), Expect = 7e-09 Identities = 110/135 (81%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 ||||| |||||||| || |||||||||||| |||| ||| | ||||| | ||||| ||| Sbjct: 156 gtctatctcgccgcagtgctcgagtacctgaccgctgagatcctggagttggccggcaac 215 Query: 338 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgagg 397 || ||| ||| ||||||||| |||||||| | ||||||||||||| ||||| ||| | Sbjct: 216 gctgcccgggataacaagaagacccgcatcatccccaggcacctgcagctcgctgtgcgc 275 Query: 398 aacgaccaggagctc 412 ||||| |||||||| Sbjct: 276 aacgatgaggagctc 290
>emb|X73147.1|EGHH2A E.gracilis mRNA for histone H2A Length = 522 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 242 ggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgag 301 ||||||||||| ||||| || || | ||||||||| || ||||| || ||||| || ||| Sbjct: 181 ggccggtacgccaagcgggtggggaagggcgccccggtgtacctggcggccgtgctggag 240 Query: 302 tacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 |||||| |||| |||||| ||||||| || || |||||| | ||||||||||||| Sbjct: 241 tacctgtccgcggagctgctggagctggcgggcaacgcctcgcgggacaacaagaag 297
>gb|U70133.1|BBU70133 Bufo bufo gagarizans replication-dependent histone H2A mRNA, complete cds Length = 466 Score = 65.9 bits (33), Expect = 1e-07 Identities = 138/173 (79%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | ||||| || |||||||| || |||||||| | ||||||| Sbjct: 160 ggcgctcccgtctacttggccgctgtgctcgagtatctcaccgccgagatcctggagctg 219 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctc 388 ||||| || |||||| |||||||||||| | |||||| | ||| | ||||||| || Sbjct: 220 gccggcaatgccgcccgcgacaacaagaagactcgcatcatcccccgtcacctgcagctg 279 Query: 389 gccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgc 441 |||||| | |||||| |||||||| | |||||||| ||| ||||||||||| Sbjct: 280 gccgtgcgcaacgacgaggagctcaacaagctgctgggcggagtcaccatcgc 332
>gb|BC106331.1| Xenopus laevis cDNA clone MGC:130860 IMAGE:7205580, complete cds Length = 799 Score = 61.9 bits (31), Expect = 2e-06 Identities = 109/135 (80%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 |||||||| ||||| || |||||||| ||| |||||||| | | ||| | ||||| ||| Sbjct: 160 gtctaccttgccgcggtgctcgagtatctgaccgccgagatcctcgagttggccggcaac 219 Query: 338 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgagg 397 || ||| ||| ||||||||| | || ||| | ||||||||||||| ||||||||| | Sbjct: 220 gctgcccgggataacaagaagactcggatcatccccaggcacctgcagctcgccgtgcgc 279 Query: 398 aacgaccaggagctc 412 |||||| |||||||| Sbjct: 280 aacgacgaggagctc 294
>ref|XM_752558.1| Ustilago maydis 521 histone H2A (UM01504.1) partial mRNA Length = 411 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 ||||||||||||||||| |||||||||||||| |||||| | | || || ||||| ||| Sbjct: 157 gtctacctcgccgccgttctcgagtacctggctgccgagattcttgaacttgccggtaac 216 Query: 338 gccgccaaggacaacaagaagtc 360 || ||| |||||||||||||| Sbjct: 217 gctgcccgtgacaacaagaagtc 239 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 185 tcggtcaaggccgggctccagttccccgtcgg 216 |||| |||||| || ||||||||||||||||| Sbjct: 64 tcggccaaggctggtctccagttccccgtcgg 95
>emb|CR705345.2|CNS0G771 Tetraodon nigroviridis full-length cDNA Length = 1250 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 248 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 307 |||||| |||| |||||| | || || ||||||||||| || |||||||| ||||| ||| Sbjct: 172 tacgcggagcgagtcggcgccggggcgcccgtctacctggctgccgtcctggagtatctg 231 Query: 308 gccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcat 366 |||||||| | ||||| | ||||| |||||||| | ||||||||| || ||||||| Sbjct: 232 accgccgagatcctggagttggccggcaacgccgcaagagacaacaaggagacccgcat 290
>emb|X03018.1|XLHISH3A Xenopus laevis histone gene cluster XlH3-A with genes H1A, H2B, H3 and H4 Length = 8592 Score = 61.9 bits (31), Expect = 2e-06 Identities = 109/135 (80%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 |||||||| ||||| || |||||||| ||| |||||||| | | ||| | ||||| ||| Sbjct: 4519 gtctaccttgccgcggtgctcgagtatctgaccgccgagatcctcgagttggccggcaac 4578 Query: 338 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgagg 397 || ||| ||| ||||||||| | || ||| | ||||||||||||| ||||||||| | Sbjct: 4579 gctgcccgggataacaagaagactcggatcatccccaggcacctgcagctcgccgtgcgc 4638 Query: 398 aacgaccaggagctc 412 |||||| |||||||| Sbjct: 4639 aacgacgaggagctc 4653
>gb|M21287.1|XELHX1H3 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster X1h3 Length = 8608 Score = 61.9 bits (31), Expect = 2e-06 Identities = 109/135 (80%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 |||||||| ||||| || |||||||| ||| |||||||| | | ||| | ||||| ||| Sbjct: 4536 gtctaccttgccgcggtgctcgagtatctgaccgccgagatcctcgagttggccggcaac 4595 Query: 338 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgagg 397 || ||| ||| ||||||||| | || ||| | ||||||||||||| ||||||||| | Sbjct: 4596 gctgcccgggataacaagaagactcggatcatccccaggcacctgcagctcgccgtgcgc 4655 Query: 398 aacgaccaggagctc 412 |||||| |||||||| Sbjct: 4656 aacgacgaggagctc 4670
>gb|M11085.1|SUPHIS2A2 Sea urchin (P.miliaris) late histone H2A-2 late mRNA, complete cds Length = 430 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 272 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 331 ||||| || |||||||| ||||||||||||||||| |||| ||| | | ||||||||| Sbjct: 154 gccccagtgtacctcgcagccgtcctcgagtacctcaccgctgagatcctcgagctcgcc 213 Query: 332 gggaacgccgccaaggacaacaagaag 358 || ||||||||| |||||||||||| Sbjct: 214 ggcaacgccgcccgcgacaacaagaag 240
>gb|M14140.1|SUPH2B2 P.miliaris histone H2A-2.1 gene, complete cds Length = 375 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 272 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 331 ||||| || |||||||| ||||||||||||||||| |||| ||| | | ||||||||| Sbjct: 139 gccccagtgtacctcgcagccgtcctcgagtacctcaccgctgagatcctcgagctcgcc 198 Query: 332 gggaacgccgccaaggacaacaagaag 358 || ||||||||| |||||||||||| Sbjct: 199 ggcaacgccgcccgcgacaacaagaag 225
>gb|M14141.1|SUPH2A2 P.miliaris histone H2A-2.2 gene, complete cds Length = 375 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 272 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 331 ||||| || |||||||| ||||||||||||||||| |||| ||| | | ||||||||| Sbjct: 139 gccccagtgtacctcgcagccgtcctcgagtacctcaccgctgagatcctcgagctcgcc 198 Query: 332 gggaacgccgccaaggacaacaagaag 358 || ||||||||| |||||||||||| Sbjct: 199 ggcaacgccgcccgcgacaacaagaag 225
>ref|NM_100760.2| Arabidopsis thaliana DNA binding AT1G08880 mRNA, complete cds Length = 725 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 ||||| ||| |||| || ||||||||||| ||||||||| |||||||||| || || ||| Sbjct: 274 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctggcgggaaac 333 Query: 338 gccgccaaggacaacaagaag 358 || || | ||| ||||||||| Sbjct: 334 gcagcaagggataacaagaag 354
>gb|AY389710.1| Hyacinthus orientalis histone H2A mRNA, partial cds Length = 677 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 272 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 331 ||||| || ||||||||||||||| | |||||||| ||||| ||| | |||||||| || Sbjct: 233 gccccggtgtacctcgccgccgtcttggagtacctcgccgctgaggtcttggagcttgct 292 Query: 332 gggaacgccgccaaggacaacaagaagtcccgcatcgtgcc 372 ||||| || || | |||||||||||| || | |||||||| Sbjct: 293 gggaatgctgcgagagacaacaagaagaccaggatcgtgcc 333 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccg 219 |||||||||||| ||||||||||||||||| Sbjct: 151 caaggccgggctacagttccccgtcggccg 180
>emb|AJ494849.1|ODI494849 Oikopleura dioica H2A.3 gene for histone h2A.3 Length = 1250 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 |||||||||||||| || || ||||||||| |||| ||| ||| ||||||||||| ||| Sbjct: 245 gtctacctcgccgcagtgcttgagtacctgaccgctgaggtgtgcgagctcgccggaaac 304 Query: 338 gccgccaaggacaacaagaag 358 || ||| |||||||||||| Sbjct: 305 gctgcccgcgacaacaagaag 325
>gb|AY093975.1| Arabidopsis thaliana At1g08880/F7G19_24 mRNA, complete cds Length = 429 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 ||||| ||| |||| || ||||||||||| ||||||||| |||||||||| || || ||| Sbjct: 169 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctggcgggaaac 228 Query: 338 gccgccaaggacaacaagaag 358 || || | ||| ||||||||| Sbjct: 229 gcagcaagggataacaagaag 249
>gb|AF412092.1|AF412092 Arabidopsis thaliana At1g08880/F7G19_24 mRNA, complete cds Length = 687 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 ||||| ||| |||| || ||||||||||| ||||||||| |||||||||| || || ||| Sbjct: 271 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctggcgggaaac 330 Query: 338 gccgccaaggacaacaagaag 358 || || | ||| ||||||||| Sbjct: 331 gcagcaagggataacaagaag 351
>emb|BX818384.1|CNS0ACP9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL76ZC11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 660 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 ||||| ||| |||| || ||||||||||| ||||||||| |||||||||| || || ||| Sbjct: 242 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctggcgggaaac 301 Query: 338 gccgccaaggacaacaagaag 358 || || | ||| ||||||||| Sbjct: 302 gcagcaagggataacaagaag 322
>emb|BX818184.1|CNS0ACP1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL65ZC10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 688 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 ||||| ||| |||| || ||||||||||| ||||||||| |||||||||| || || ||| Sbjct: 237 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctggcgggaaac 296 Query: 338 gccgccaaggacaacaagaag 358 || || | ||| ||||||||| Sbjct: 297 gcagcaagggataacaagaag 317
>gb|AY087924.1| Arabidopsis thaliana clone 39667 mRNA, complete sequence Length = 728 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 ||||| ||| |||| || ||||||||||| ||||||||| |||||||||| || || ||| Sbjct: 278 gtctatctctccgctgttctcgagtacctcgccgccgaggtgttggagctggcgggaaac 337 Query: 338 gccgccaaggacaacaagaag 358 || || | ||| ||||||||| Sbjct: 338 gcagcaagggataacaagaag 358
>ref|XM_391803.1| Gibberella zeae PH-1 H2A_NEUCR Histone H2A (FG11627.1) partial mRNA Length = 405 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 275 cccgtctacctcgccgccgtcctcgagtacct 306 |||||||||||||| ||||||||||||||||| Sbjct: 151 cccgtctacctcgctgccgtcctcgagtacct 182
>emb|CR722682.2|CNS0GKKG Tetraodon nigroviridis full-length cDNA Length = 824 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 275 cccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccggg 334 ||||||||||| ||||| ||||| || |||||| |||||||| | ||||| | ||||| Sbjct: 173 cccgtctacctggccgcggtccttgaatacctgaccgccgagatcctggagttggccggc 232 Query: 335 aacgccgccaaggacaacaagaag 358 ||||||||| |||||||||||| Sbjct: 233 aacgccgcccgcgacaacaagaag 256
>emb|CR673736.2|CNS0FITQ Tetraodon nigroviridis full-length cDNA Length = 767 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 275 cccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccggg 334 ||||||||||| ||||| ||||| || |||||| |||||||| | ||||| | ||||| Sbjct: 132 cccgtctacctggccgcggtccttgaatacctgaccgccgagatcctggagttggccggc 191 Query: 335 aacgccgccaaggacaacaagaag 358 ||||||||| |||||||||||| Sbjct: 192 aacgccgcccgcgacaacaagaag 215
>emb|CR673199.2|CNS0FIET Tetraodon nigroviridis full-length cDNA Length = 775 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 |||||||| |||||||| || ||||||||| |||||||| | ||||||| ||||| ||| Sbjct: 187 gtctacctggccgccgtgctggagtacctgaccgccgagatcctggagctggccggcaac 246 Query: 338 gccgccaaggacaacaagaa 357 || ||| ||||||||||| Sbjct: 247 gctgcccgcgacaacaagaa 266 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 193 ggccgggctccagttccccgtcggccg 219 ||||||||||||||||||||||||||| Sbjct: 102 ggccgggctccagttccccgtcggccg 128
>emb|CR659269.2|CNS0F7NV Tetraodon nigroviridis full-length cDNA Length = 805 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 275 cccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccggg 334 ||||||||||| ||||| ||||| || |||||| |||||||| | ||||| | ||||| Sbjct: 171 cccgtctacctggccgcggtccttgaatacctgaccgccgagatcctggagttggccggc 230 Query: 335 aacgccgccaaggacaacaagaag 358 ||||||||| |||||||||||| Sbjct: 231 aacgccgcccgcgacaacaagaag 254
>gb|BC060324.1| Homo sapiens histone 2, H2ac, mRNA (cDNA clone MGC:74460 IMAGE:3892650), complete cds Length = 446 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||||||| |||||||| | ||||||| Sbjct: 174 ggcgcgcccgtctacatggcggcggtcctcgagtacctgaccgccgagatcctggagctg 233 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 234 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 272
>ref|NM_003517.2| Homo sapiens histone 2, H2ac (HIST2H2AC), mRNA Length = 437 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||||||| |||||||| | ||||||| Sbjct: 139 ggcgcgcccgtctacatggcggcggtcctcgagtacctgaccgccgagatcctggagctg 198 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 237
>gb|AY648852.1| Homo sapiens histone H2A/r gene, complete cds Length = 1119 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||||||| |||||||| | ||||||| Sbjct: 512 ggcgcgcccgtctacatggcggcggtcctcgagtacctgaccgccgagatcctggagctg 571 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 572 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 610
>ref|XM_954349.1| Neurospora crassa OR74A hypothetical protein (NCU02437.1) partial mRNA Length = 405 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccga 315 ||||| ||||||||||||||||| || ||||||||||| || ||||| Sbjct: 145 ggcgctcccgtctacctcgccgctgttctcgagtacctcgctgccga 191
>ref|XM_331212.1| Neurospora crassa OR74A hypothetical protein (NCU02437.1) partial mRNA Length = 405 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccga 315 ||||| ||||||||||||||||| || ||||||||||| || ||||| Sbjct: 145 ggcgctcccgtctacctcgccgctgttctcgagtacctcgctgccga 191
>ref|XM_569065.1| Cryptococcus neoformans var. neoformans JEC21 histone H2A-1 (CNB00550) partial mRNA Length = 544 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 275 cccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccggg 334 |||||||||||||| |||||||| |||||||| ||||| || | | ||| | ||||| Sbjct: 205 cccgtctacctcgctgccgtccttgagtaccttgccgctgaaatcctcgagttggccggt 264 Query: 335 aacgccgccaaggacaacaagaagtcccgcatcgt 369 ||||| ||| ||||||||||||||||| ||||| Sbjct: 265 aacgctgcccgagacaacaagaagtcccgtatcgt 299
>emb|AL591493.14| Human DNA sequence from clone RP11-196G18 on chromosome 1 Contains a ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) (UBE2D1) pseudogene, the FCGR1A gene for Fc fragment of IgG, high affinity Ia, receptor for (CD64), a novel gene similar to histone 2, H2be (HIST2H2BE), a novel gene similar to histone 2, H3c (HIST2H3C), the HIST2H4 gene for histone 2, H4, the HIST2H3C gene for histone 2, H3c, the HIST2H2AA gene for histone 2, H2aa, a histone 2, H2bd pseudogene (HIST2H2BD), a histone 2, H2bc pseudogene (HIST2H2BC), a novel gene similar to histone 2, H2aa (HIST2H2AA), a novel gene similar to histone 2, H3c (HIST2H3C), a novel gene similar to histone 1, H4 (HIST2H4), the HIST2H2BE gene for histone 2, H2be, the HIST2H2AC gene for histone 2, H2ac, the HIST2H2AB gene for histone 2, H2ab, a novel protein similar to histone 2, a novel gene, the SV2A gene for synaptic vesicle glycoprotein 2A, the 3' end of the SF3B4 gene for splicing factor 3b, subunit 4, 49kDa and five CpG islands, complete sequence Length = 188956 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||||||| |||||||| | ||||||| Sbjct: 148823 ggcgcgcccgtctacatggcggcggtcctcgagtacctgaccgccgagatcctggagctg 148882 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 148883 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 148921 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 112979 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 113038 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 113039 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 113077 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Minus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 104287 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 104228 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 104227 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 104189 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 248 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 307 |||||| |||| ||||| | |||||||| || ||||| || || ||||||||||||||| Sbjct: 149509 tacgcggagcgggtcggggcaggcgccccggtgtacctggcggcggtcctcgagtacctg 149450 Query: 308 gccgc 312 |||| Sbjct: 149449 accgc 149445
>ref|XM_962318.1| PREDICTED: Tribolium castaneum similar to H2A histone family, member X (LOC655756), mRNA Length = 545 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 272 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 331 |||||||| ||||| |||||||| | ||||||||||| || ||| || ||||| | ||| Sbjct: 195 gcccccgtgtacctggccgccgttatggagtacctggctgctgaggtgctggagttggcc 254 Query: 332 gggaacgccgccaaggacaacaagaag 358 || ||||| || | ||||||||||||| Sbjct: 255 ggaaacgctgctagggacaacaagaag 281
>gb|AY062171.1| Neurospora crassa histone H2A (hh2A) and histone H2B (hh2B) genes, complete cds Length = 6309 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccga 315 ||||| ||||||||||||||||| || ||||||||||| || ||||| Sbjct: 827 ggcgctcccgtctacctcgccgctgttctcgagtacctcgctgccga 781
>gb|AF255740.1|AF255740 Bufo bufo gagarizans histone H1 (H1) and histone H2A variant (H2AInr) genes, complete cds Length = 2396 Score = 54.0 bits (27), Expect = 4e-04 Identities = 137/173 (79%), Gaps = 3/173 (1%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | ||||| || |||||||| || |||||||| | ||||||| Sbjct: 1366 ggcgctcccgtctacttggccgctgtgctcgagtatctcaccgccgagatcctggagctg 1425 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctc 388 ||||| || |||||| |||||||||| |||||||| | ||| | ||||||| || Sbjct: 1426 gccggcaatgccgcccgcgacaacaaga---cccgcatcatcccccgtcacctgcagctg 1482 Query: 389 gccgtgaggaacgaccaggagctcgggaggctgctggccggcgtcaccatcgc 441 |||||| | |||||| |||||||| | |||||||| ||| ||||||||||| Sbjct: 1483 gccgtgcgcaacgacgaggagctcaacaagctgctgggcggagtcaccatcgc 1535
>ref|XM_344599.2| PREDICTED: Rattus norvegicus histone 1, H2ao (predicted) (Hist1h2ao_predicted), mRNA Length = 483 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 |||||||| || ||||| || ||||| || ||||||||| | |||||| | ||||||||| Sbjct: 139 ggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcttggagctc 198 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || | ||||||||| ||| | |||||| Sbjct: 199 gcaggcaacgcggcgagggacaacaaaaagacacgcatc 237
>gb|AY131973.1| Homo sapiens histone H2A (HIST2H2AC) gene, complete cds Length = 1119 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||||||| |||||||| | ||||||| Sbjct: 512 ggcgcgcccgtctacatggcggcggtcctcgagtacctgaccgccgagatcctggagctg 571 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 572 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 610
>gb|M11084.1|SUPHIS2A1 Sea urchin (P.miliaris) late histone H2A-1 late mRNA, complete cds Length = 465 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 272 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 331 ||||| || |||||||| ||||| ||||||||||| |||| ||| | | ||||||||| Sbjct: 180 gccccagtgtacctcgcagccgtactcgagtacctcaccgctgagatcctcgagctcgcc 239 Query: 332 gggaacgccgccaaggacaacaagaag 358 || ||||||||| |||||||||||| Sbjct: 240 ggcaacgccgcccgcgacaacaagaag 266
>ref|NM_001030332.2| Xenopus tropicalis hypothetical protein LOC594922 (LOC594922), mRNA Length = 519 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 ||||| || ||||| || ||||| |||||| |||| ||| | ||||| | ||||||||| Sbjct: 162 gtctatctggccgcagtgctcgaatacctgaccgctgagatcctggagttggccgggaac 221 Query: 338 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgc 383 || ||| ||| ||||||||| |||| ||| | ||||||||||||| Sbjct: 222 gctgcccgggataacaagaagacccgtatcatccccaggcacctgc 267
>ref|NM_001030325.2| Xenopus tropicalis hypothetical protein LOC594911 (LOC594911), mRNA Length = 787 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 ||||| || ||||| || ||||| |||||| |||| ||| | ||||| | ||||||||| Sbjct: 153 gtctatctggccgcagtgctcgaatacctgaccgctgagatcctggagttggccgggaac 212 Query: 338 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgc 383 || ||| ||| ||||||||| |||| ||| | ||||||||||||| Sbjct: 213 gctgcccgggataacaagaagacccgtatcatccccaggcacctgc 258
>gb|BC074601.1| Xenopus tropicalis MGC69325 protein, mRNA (cDNA clone MGC:69325 IMAGE:5308897), complete cds Length = 1495 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 ||||| || ||||| || ||||| |||||| |||| ||| | ||||| | ||||||||| Sbjct: 164 gtctatctggccgcagtgctcgaatacctgaccgctgagatcctggagttggccgggaac 223 Query: 338 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgc 383 || ||| ||| ||||||||| |||| ||| | ||||||||||||| Sbjct: 224 gctgcccgggataacaagaagacccgtatcatccccaggcacctgc 269
>gb|AF517874.1| Griffithsia japonica isolate Gj10 histone protein mRNA, partial cds Length = 628 Score = 52.0 bits (26), Expect = 0.002 Identities = 137/174 (78%) Strand = Plus / Plus Query: 190 caaggccgggctccagttccccgtcggccgcatcgggcggtacctcaagaagggccggta 249 |||||||||||| |||||||| ||||| || |||| || | |||| |||||| | || Sbjct: 134 caaggccgggctgcagttcccggtcggtcgtatcgaccgcttcctccgcaagggcggcta 193 Query: 250 cgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||| | ||||| ||| | |||||||| || || | ||||||||| | |||||| || | Sbjct: 194 cgccgaccgcgtgggcgccggcgcccctgtgtatatggccgccgtcatggagtacttgac 253 Query: 310 cgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccg 363 |||||| || | ||||||||||| ||||||||| || |||||||||||||| Sbjct: 254 ggccgaggtgctcgagctcgccggcaacgccgcccgcgataacaagaagtcccg 307
>ref|NM_001004821.1| Xenopus tropicalis MGC69325 protein (MGC69325), mRNA Length = 1495 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 ||||| || ||||| || ||||| |||||| |||| ||| | ||||| | ||||||||| Sbjct: 164 gtctatctggccgcagtgctcgaatacctgaccgctgagatcctggagttggccgggaac 223 Query: 338 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgc 383 || ||| ||| ||||||||| |||| ||| | ||||||||||||| Sbjct: 224 gctgcccgggataacaagaagacccgtatcatccccaggcacctgc 269
>ref|XM_314447.2| Anopheles gambiae str. PEST ENSANGP00000016040 (ENSANGG00000013551), partial mRNA Length = 375 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 248 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 307 |||||| |||||||||| ||||||| |||||||| || ||||| ||| | ||||||||| Sbjct: 115 tacgcggagcgcgtcggagcgggcgcgcccgtctatctggccgcggtcatggagtacctg 174 Query: 308 gc 309 || Sbjct: 175 gc 176
>ref|XM_306256.1| Anopheles gambiae str. PEST ENSANGP00000000004 (ENSANGG00000000004), mRNA Length = 630 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 248 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 307 |||||| |||||||||| ||||||| |||||||| || ||||| ||| | ||||||||| Sbjct: 229 tacgcggagcgcgtcggagcgggcgcgcccgtctatctggccgcggtcatggagtacctg 288 Query: 308 gc 309 || Sbjct: 289 gc 290
>emb|CR762147.2| Xenopus tropicalis finished cDNA, clone TGas072e19 Length = 519 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 ||||| || ||||| || ||||| |||||| |||| ||| | ||||| | ||||||||| Sbjct: 162 gtctatctggccgcagtgctcgaatacctgaccgctgagatcctggagttggccgggaac 221 Query: 338 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgc 383 || ||| ||| ||||||||| |||| ||| | ||||||||||||| Sbjct: 222 gctgcccgggataacaagaagacccgtatcatccccaggcacctgc 267
>emb|CR761789.2| Xenopus tropicalis finished cDNA, clone TGas125k04 Length = 787 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 ||||| || ||||| || ||||| |||||| |||| ||| | ||||| | ||||||||| Sbjct: 153 gtctatctggccgcagtgctcgaatacctgaccgctgagatcctggagttggccgggaac 212 Query: 338 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgc 383 || ||| ||| ||||||||| |||| ||| | ||||||||||||| Sbjct: 213 gctgcccgggataacaagaagacccgtatcatccccaggcacctgc 258
>ref|XM_525084.1| PREDICTED: Pan troglodytes similar to Histone H2A.1 (LOC469700), mRNA Length = 393 Score = 50.1 bits (25), Expect = 0.006 Identities = 70/85 (82%) Strand = Plus / Plus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| ||||| || ||||| || |||||||||||| | |||| Sbjct: 125 agcgcgtgggcgccggcgccccggtctatctggccgcggtgctcgagtacctgactgccg 184 Query: 315 agctgttggagctcgccgggaacgc 339 || | ||||||| ||||| ||||| Sbjct: 185 agatcctggagcttgccggcaacgc 209
>gb|BC031333.1| Homo sapiens histone 1, H3d, mRNA (cDNA clone MGC:45668 IMAGE:3608479), complete cds Length = 890 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 299 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 138 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 197 Query: 359 tcccgcatc 367 |||||||| Sbjct: 198 acccgcatc 206
>ref|NG_001335.1| Homo sapiens genomic large histone family cluster (HFL@) on chromosome 6 Length = 269712 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Minus Query: 299 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 183075 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 183016 Query: 359 tcccgcatc 367 |||||||| Sbjct: 183015 acccgcatc 183007
>ref|NM_003530.3| Homo sapiens histone 1, H3d (HIST1H3D), mRNA Length = 864 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 299 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 162 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 221 Query: 359 tcccgcatc 367 |||||||| Sbjct: 222 acccgcatc 230
>ref|NM_021065.2| Homo sapiens histone 1, H2ad (HIST1H2AD), mRNA Length = 460 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 299 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 169 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 228 Query: 359 tcccgcatc 367 |||||||| Sbjct: 229 acccgcatc 237
>ref|XM_978296.1| PREDICTED: Mus musculus similar to histone 2a, transcript variant 1 (LOC665433), mRNA Length = 467 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 159 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 218 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 219 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 271
>emb|CR681249.2|CNS0FOLP Tetraodon nigroviridis full-length cDNA Length = 821 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 |||||||| ||||| ||||| || |||||| |||||||| | ||||| | ||||| ||| Sbjct: 173 gtctacctggccgcggtccttgaatacctgaccgccgagatcctggagttggccggcaac 232 Query: 338 gccgccaaggacaacaagaag 358 |||||| |||||||||||| Sbjct: 233 gccgcccgcgacaacaagaag 253
>ref|XM_789645.1| PREDICTED: Strongylocentrotus purpuratus similar to histone H2A (LOC590023), mRNA Length = 392 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 290 gccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggac 349 ||||| |||||||||||| |||||||| | | |||||||| || ||||||||| ||| Sbjct: 157 gccgtactcgagtacctgaccgccgagatcctcgagctcgcaggcaacgccgcccgcgac 216 Query: 350 aacaagaag 358 ||||||||| Sbjct: 217 aacaagaag 225
>emb|AL031777.5|HS34B20 Human DNA sequence from clone RP1-34B20 on chromosome 6p21.31-22.2 Contains seventeen histone (pseudo)genes and gene RPS10P1 (40S Ribosomal protein S10 pseudogene 1), three CpG islands, ESTs, STSs and GSSs, complete sequence Length = 89301 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Minus Query: 299 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 4457 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 4398 Query: 359 tcccgcatc 367 |||||||| Sbjct: 4397 acccgcatc 4389
>emb|Z80776.1|HSH2AG H.sapiens H2A/g gene Length = 840 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 299 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 367 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 426 Query: 359 tcccgcatc 367 |||||||| Sbjct: 427 acccgcatc 435
>emb|X16495.1|MMHIST2A Murine H2A gene for histone H2A Length = 470 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 299 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 172 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 231 Query: 359 tcccgcatc 367 |||||||| Sbjct: 232 acccgcatc 240
>emb|AL592149.8| Mouse DNA sequence from clone RP23-283N14 on chromosome 13 Contains a novel gene, the genes for three H1, four H2a, five H2b, four H3 and four H4 histone family members, the 3' end of a variant of the Hfe gene for hemochromatosis protein (Mr2) and ten CpG islands, complete sequence Length = 184730 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Minus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 164208 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 164149 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 164148 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 164096 Score = 42.1 bits (21), Expect = 1.5 Identities = 90/113 (79%) Strand = Plus / Minus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 51590 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 51531 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 51530 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 51478
>emb|AL589879.21| Mouse DNA sequence from clone RP23-38E20 on chromosome 13 Contains the genes for H2b histone family member A, two H2a, two H4 and an H2b histone family member, a serine/threonine protein kinase pseudogene, a novel pseudogene, a novel gene (4930500C15Rik), the gene for a novel KRAB box and C2H2 Zinc Finger containing protein, a ribosomal protein L21 (RPL21) pseudogene, a TU mitochondrial translation elongation factor (tufa) pseudogene, the 5' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121 and four CpG islands, complete sequence Length = 182817 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Minus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 33518 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 33459 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 33458 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 33406 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 10758 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 10817 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 10818 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 10870
>emb|AL590614.8| Mouse DNA sequence from clone RP23-9O16 on chromosome 13 Contains the 3' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121, the Prss16 gene for thymus serine protease16, three novel genes, the genes for two H2a, two H2b and one H4 histone family members, a ribosomal protein L37A (Rpl37a) pseudogene, a novel pseudogene, three genes for novel vomeronasal 1 receptor H (V1rh) family members, the gene for a novel vomeronasal 1 receptor I (V1ri) family member, six V1ri pseudogenes, a V1rh pseudogene and six CpG islands, complete sequence Length = 210845 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Minus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 60159 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 60100 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 60099 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 60047 Score = 42.1 bits (21), Expect = 1.5 Identities = 90/113 (79%) Strand = Plus / Minus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 52784 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 52725 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 52724 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 52672
>emb|AJ494848.1|ODI494848 Oikopleura dioica H3.1 gene, H4.1 gene, H1.1 gene, and H2A.1 gene Length = 5705 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 272 gcccccgtctacctcgccgccgtcctcga 300 ||||||||||||||||||||||| ||||| Sbjct: 3366 gcccccgtctacctcgccgccgtactcga 3338 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ctccagttccccgtcggccg 219 |||||||||||||||||||| Sbjct: 3438 ctccagttccccgtcggccg 3419
>gb|BC065803.1| Mus musculus histone 1, H2ag, mRNA (cDNA clone MGC:73771 IMAGE:1263745), complete cds Length = 527 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 147 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 206 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 207 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 259
>gb|BC093807.1| Homo sapiens histone 1, H2ad, mRNA (cDNA clone MGC:120842 IMAGE:7939652), complete cds Length = 467 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 299 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 208 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 267 Query: 359 tcccgcatc 367 |||||||| Sbjct: 268 acccgcatc 276
>dbj|AK145443.1| Mus musculus 5 days embryo whole body cDNA, RIKEN full-length enriched library, clone:I0C0045N09 product:histone 1, H2ad, full insert sequence Length = 446 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 158 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 217 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 218 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 270
>emb|CR541999.1| Homo sapiens full open reading frame cDNA clone RZPDo834C1135D for gene HIST1H3D, histone 1, H3d; complete cds, without stopcodon Length = 390 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 299 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 169 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 228 Query: 359 tcccgcatc 367 |||||||| Sbjct: 229 acccgcatc 237
>emb|CR541970.1| Homo sapiens full open reading frame cDNA clone RZPDo834G1134D for gene HIST1H3D, histone 1, H3d; complete cds, incl. stopcodon Length = 393 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 299 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 169 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 228 Query: 359 tcccgcatc 367 |||||||| Sbjct: 229 acccgcatc 237
>ref|NM_178186.2| Mus musculus histone 1, H2ag (Hist1h2ag), mRNA Length = 527 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 147 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 206 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 207 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 259
>gb|BC093809.1| Homo sapiens histone 1, H2ad, mRNA (cDNA clone MGC:120844 IMAGE:7939654), complete cds Length = 473 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 299 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 211 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 270 Query: 359 tcccgcatc 367 |||||||| Sbjct: 271 acccgcatc 279
>gb|AY158937.1| Mus musculus histone protein Hist1h2bc gene, complete cds Length = 1401 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Minus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| |||||||| || ||||| || ||||||||| | |||| Sbjct: 145 agcgcgtgggcgccggcgccccggtctacctggcggccgtgctggagtacctgacggccg 86 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 85 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 33
>gb|M31922.1|VVCH4AB V.carteri histone H2A-IV and H2B-IV genes, complete cds Length = 2132 Score = 50.1 bits (25), Expect = 0.006 Identities = 82/101 (81%) Strand = Plus / Minus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||||||||||||||| ||||| || || ||||||||| | || ||| | ||||||| Sbjct: 692 ggcgcccccgtctacctggccgctgtgctggagtacctgactgctgaggttctggagctg 633 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatcgt 369 || || ||||| ||| |||||||||||| ||||||||| Sbjct: 632 gctggcaacgcggcccgcgacaacaagaagaaccgcatcgt 592
>gb|AY131985.1| Homo sapiens histone H2A (HIST1H2AD) gene, complete cds Length = 1119 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 299 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||||| |||||||| | ||||||| || || ||||||||| |||||||||||| Sbjct: 542 gagtacctgaccgccgagatcctggagctggcgggcaacgccgcccgcgacaacaagaag 601 Query: 359 tcccgcatc 367 |||||||| Sbjct: 602 acccgcatc 610
>ref|NM_122649.2| Arabidopsis thaliana DNA binding AT5G27670 mRNA, complete cds Length = 774 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 281 tacctcgccgccgtcctcgagtacctggccgccgag 316 |||||||||||||| ||||| ||||| ||||||||| Sbjct: 271 tacctcgccgccgttctcgaatacctagccgccgag 306
>ref|NM_120334.2| Arabidopsis thaliana DNA binding AT5G02560 mRNA, complete cds Length = 667 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 252 cgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagta 303 ||||||| ||||| || || || || ||||| |||||||||||||||||||| Sbjct: 204 cgaagcgtgtcggaaccggagctccggtctatctcgccgccgtcctcgagta 255
>gb|BT025612.1| Arabidopsis thaliana At5g02560 mRNA, complete cds Length = 462 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 252 cgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagta 303 ||||||| ||||| || || || || ||||| |||||||||||||||||||| Sbjct: 149 cgaagcgtgtcggaaccggagctccggtctatctcgccgccgtcctcgagta 200
>ref|NM_177688.2| Mus musculus H2A histone family, member J (H2afj), mRNA Length = 1754 Score = 48.1 bits (24), Expect = 0.025 Identities = 96/120 (80%) Strand = Plus / Plus Query: 248 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 307 |||||| ||||||| ||| |||| || ||||| ||||| || || || || ||||||||| Sbjct: 135 tacgcggagcgcgtgggcgcgggagcgcccgtgtacctggcggcggtgctggagtacctg 194 Query: 308 gccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 | |||||| | ||||||| || || ||||| || | ||||||||||||| | |||||| Sbjct: 195 acggccgagatcctggagctggcgggcaacgcggcgagggacaacaagaagacgcgcatc 254
>gb|AC122804.4| Mus musculus BAC clone RP23-296J10 from 6, complete sequence Length = 205659 Score = 48.1 bits (24), Expect = 0.025 Identities = 96/120 (80%) Strand = Plus / Minus Query: 248 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 307 |||||| ||||||| ||| |||| || ||||| ||||| || || || || ||||||||| Sbjct: 108826 tacgcggagcgcgtgggcgcgggagcgcccgtgtacctggcggcggtgctggagtacctg 108767 Query: 308 gccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 | |||||| | ||||||| || || ||||| || | ||||||||||||| | |||||| Sbjct: 108766 acggccgagatcctggagctggcgggcaacgcggcgagggacaacaagaagacgcgcatc 108707
>emb|CR705936.2|CNS0G7NG Tetraodon nigroviridis full-length cDNA Length = 786 Score = 48.1 bits (24), Expect = 0.025 Identities = 69/84 (82%) Strand = Plus / Plus Query: 275 cccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccggg 334 ||||||||||| || || ||||| || |||||| |||||||| | ||||| | ||||| Sbjct: 172 cccgtctacctggctgcggtccttgaatacctgaccgccgagatcctggagttggccggc 231 Query: 335 aacgccgccaaggacaacaagaag 358 ||||||||| |||||||||||| Sbjct: 232 aacgccgcccgcgacaacaagaag 255
>ref|XM_792460.1| PREDICTED: Strongylocentrotus purpuratus similar to CG31618-PA (LOC592962), mRNA Length = 411 Score = 48.1 bits (24), Expect = 0.025 Identities = 78/96 (81%) Strand = Plus / Plus Query: 272 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 331 ||||| |||||||| || ||||| ||||||||| |||| || ||| | | ||||| || Sbjct: 142 gccccagtctacctggctgccgtgctcgagtacttggcagctgagatcctcgagctggct 201 Query: 332 gggaacgccgccaaggacaacaagaagtcccgcatc 367 || |||||||| ||||||||||||||||||||| Sbjct: 202 ggcaacgccgcacgcgacaacaagaagtcccgcatc 237
>emb|AL162971.1|ATT22P11 Arabidopsis thaliana DNA chromosome 5, BAC clone T22P11 (ESSA project) Length = 96424 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 252 cgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagta 303 ||||||| ||||| || || || || ||||| |||||||||||||||||||| Sbjct: 56515 cgaagcgtgtcggaaccggagctccggtctatctcgccgccgtcctcgagta 56566
>emb|AJ494853.1|ODI494853 Oikopleura dioica mRNA for histone H2A.1a (H2A.1a gene) Length = 509 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcga 300 ||||| || ||||||||||||||||||||||| Sbjct: 141 ggcgcaccagtctacctcgccgccgtcctcga 172
>gb|AF493985.1| Triticum aestivum H2A-1 gene, partial sequence Length = 538 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 418 gctgctggccggcgtcaccatcgcgcacggcg 449 |||||| ||||||||||||||||| ||||||| Sbjct: 336 gctgctcgccggcgtcaccatcgcccacggcg 305
>gb|AY078019.1| Arabidopsis thaliana AT5g27670/F15A18_130 mRNA, complete cds Length = 453 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 281 tacctcgccgccgtcctcgagtacctggccgccgag 316 |||||||||||||| ||||| ||||| ||||||||| Sbjct: 181 tacctcgccgccgttctcgaatacctagccgccgag 216
>gb|AF385711.1|AF385711 Arabidopsis thaliana AT5g27670/F15A18_130 mRNA, complete cds Length = 759 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 281 tacctcgccgccgtcctcgagtacctggccgccgag 316 |||||||||||||| ||||| ||||| ||||||||| Sbjct: 270 tacctcgccgccgttctcgaatacctagccgccgag 305
>dbj|AK053755.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130307C13 product:HISTONE H2A homolog [Gallus gallus], full insert sequence Length = 1754 Score = 48.1 bits (24), Expect = 0.025 Identities = 96/120 (80%) Strand = Plus / Plus Query: 248 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 307 |||||| ||||||| ||| |||| || ||||| ||||| || || || || ||||||||| Sbjct: 135 tacgcggagcgcgtgggcgcgggagcgcccgtgtacctggcggcggtgctggagtacctg 194 Query: 308 gccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 | |||||| | ||||||| || || ||||| || | ||||||||||||| | |||||| Sbjct: 195 acggccgagatcctggagctggcgggcaacgcggcgagggacaacaagaagacgcgcatc 254
>emb|BX833753.1|CNS09Z4Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL75ZC12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 636 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 252 cgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagta 303 ||||||| ||||| || || || || ||||| |||||||||||||||||||| Sbjct: 182 cgaagcgtgtcggaaccggagctccggtctatctcgccgccgtcctcgagta 233
>gb|AY085515.1| Arabidopsis thaliana clone 1553 mRNA, complete sequence Length = 630 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 252 cgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagta 303 ||||||| ||||| || || || || ||||| |||||||||||||||||||| Sbjct: 204 cgaagcgtgtcggaaccggagctccggtctatctcgccgccgtcctcgagta 255
>gb|AC069556.4|AC069556 Genomic Sequence For Arabidopsis thaliana Clone T1G16 From Chromosome V, complete sequence Length = 93672 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 281 tacctcgccgccgtcctcgagtacctggccgccgag 316 |||||||||||||| ||||| ||||| ||||||||| Sbjct: 13438 tacctcgccgccgttctcgaatacctagccgccgag 13403
>gb|AY104637.1| Zea mays PCO070433 mRNA sequence Length = 767 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 260 gtcggcacgggcgcccccgtctacctcgccgccgtcctcgagta 303 |||||| | |||||||| ||||||||||| ||||| |||||||| Sbjct: 243 gtcggcgccggcgcccctgtctacctcgctgccgtgctcgagta 286
>gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from chromosome V near 68.5 cM, complete sequence Length = 107931 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 281 tacctcgccgccgtcctcgagtacctggccgccgag 316 |||||||||||||| ||||| ||||| ||||||||| Sbjct: 102472 tacctcgccgccgttctcgaatacctagccgccgag 102437
>gb|BC099606.1| Mus musculus H2A histone family, member J, mRNA (cDNA clone MGC:118637 IMAGE:1383389), complete cds Length = 587 Score = 48.1 bits (24), Expect = 0.025 Identities = 96/120 (80%) Strand = Plus / Plus Query: 248 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 307 |||||| ||||||| ||| |||| || ||||| ||||| || || || || ||||||||| Sbjct: 192 tacgcggagcgcgtgggcgcgggagcgcccgtgtacctggcggcggtgctggagtacctg 251 Query: 308 gccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 | |||||| | ||||||| || || ||||| || | ||||||||||||| | |||||| Sbjct: 252 acggccgagatcctggagctggcgggcaacgcggcgagggacaacaagaagacgcgcatc 311
>gb|J00950.1|NVIHIS2A Newt histone H2a gene, partial Length = 96 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 346 ggacaacaagaagtcccgcatcgtgcccaggcacct 381 ||||||||||||| |||||||| | ||||||||||| Sbjct: 18 ggacaacaagaagacccgcatcatccccaggcacct 53
>ref|XM_474362.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1617 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 411 tcgggaggctgctggccggcgtc 433 ||||||||||||||||||||||| Sbjct: 467 tcgggaggctgctggccggcgtc 489
>gb|DQ215051.1| Taeniopygia guttata clone 0061P0027A01 H2A histone family member V variant 1-like mRNA, complete sequence Length = 707 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 193 ggccgggctccagttccccgtcggccgcatc 223 ||||||||| |||||||| |||||||||||| Sbjct: 119 ggccgggctgcagttcccagtcggccgcatc 149
>gb|DQ215050.1| Taeniopygia guttata clone 0058P0007H05 H2A histone family member V variant 1-like mRNA, complete sequence Length = 701 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 193 ggccgggctccagttccccgtcggccgcatc 223 ||||||||| |||||||| |||||||||||| Sbjct: 113 ggccgggctgcagttcccagtcggccgcatc 143
>gb|DQ215047.1| Taeniopygia guttata clone 0058P0026B08 H2A histone family member V variant 1-like mRNA, complete sequence Length = 729 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 193 ggccgggctccagttccccgtcggccgcatc 223 ||||||||| |||||||| |||||||||||| Sbjct: 141 ggccgggctgcagttcccagtcggccgcatc 171
>gb|DQ215046.1| Taeniopygia guttata clone 0058P0036G12 H2A histone family member V variant 1-like mRNA, complete sequence Length = 661 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 193 ggccgggctccagttccccgtcggccgcatc 223 ||||||||| |||||||| |||||||||||| Sbjct: 60 ggccgggctgcagttcccagtcggccgcatc 90
>ref|XM_513764.1| PREDICTED: Pan troglodytes LOC457261 (LOC457261), mRNA Length = 789 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 544 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 603 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 604 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 642
>gb|BC019308.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:4205 IMAGE:2823572), complete cds Length = 567 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 177 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 236 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 237 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 275
>gb|BC001629.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:2238 IMAGE:3536984), complete cds Length = 567 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 177 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 236 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 237 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 275
>ref|XM_607721.2| PREDICTED: Bos taurus similar to Histone H2A.1 (LOC529277), mRNA Length = 522 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 193 ggccgggctccagttccccgtcggccg 219 ||||||||||||||||||||| ||||| Sbjct: 64 ggccgggctccagttccccgtaggccg 90
>ref|XM_868899.1| PREDICTED: Bos taurus similar to Histone H2A.1 (LOC616790), mRNA Length = 413 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 193 ggccgggctccagttccccgtcggccg 219 ||||||||||||||||||||| ||||| Sbjct: 83 ggccgggctccagttccccgtaggccg 109
>ref|XM_865976.1| PREDICTED: Bos taurus similar to Histone H2A.g (H2A/g) (H2A.3) (LOC614970), mRNA Length = 447 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 193 ggccgggctccagttccccgtcggccg 219 ||||||||||||||||||||| ||||| Sbjct: 63 ggccgggctccagttccccgtgggccg 89 Score = 42.1 bits (21), Expect = 1.5 Identities = 57/69 (82%) Strand = Plus / Plus Query: 299 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||||| | |||||| | || ||||| || || ||||| ||| ||||||||||||| Sbjct: 169 gagtacctgacagccgagatcttagagctggcgggcaacgcagcccgggacaacaagaag 228 Query: 359 tcccgcatc 367 |||||||| Sbjct: 229 acccgcatc 237
>ref|NM_003516.2| Homo sapiens histone 2, H2aa (HIST2H2AA), mRNA Length = 534 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 192 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 251 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 252 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 290
>emb|CT025304.2| Xenopus tropicalis finished cDNA, clone TNeu074k04 Length = 550 Score = 46.1 bits (23), Expect = 0.098 Identities = 47/55 (85%) Strand = Plus / Plus Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgc 383 ||||||||||| ||| ||| ||||||||| |||| ||| | ||||||||||||| Sbjct: 213 gccgggaacgctgcccgggataacaagaagacccgtatcatccccaggcacctgc 267
>ref|XM_761869.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_397_9413_9787) partial mRNA Length = 375 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 275 cccgtctacctcgccgccgtcctcgag 301 |||||||||||||| |||||||||||| Sbjct: 136 cccgtctacctcgcggccgtcctcgag 162
>ref|XM_766102.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_12_46633_46109) partial mRNA Length = 525 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 275 cccgtctacctcgccgccgtcctcgag 301 |||||||||||||| |||||||||||| Sbjct: 222 cccgtctacctcgcggccgtcctcgag 196
>ref|XM_766103.1| Giardia lamblia ATCC 50803 histone H2A (GLP_12_46277_46651) partial mRNA Length = 375 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 275 cccgtctacctcgccgccgtcctcgag 301 |||||||||||||| |||||||||||| Sbjct: 136 cccgtctacctcgcggccgtcctcgag 162
>ref|XM_758864.1| Theileria parva strain Muguga chromosome 4 histone H2A (TP04_0322) partial mRNA Length = 384 Score = 46.1 bits (23), Expect = 0.098 Identities = 65/79 (82%) Strand = Plus / Plus Query: 228 ggtacctcaagaagggccggtacgcgaagcgcgtcggcacgggcgcccccgtctacctcg 287 ||||||| ||||| ||| ||||||| || ||||| || | ||||| ||||| ||| | | Sbjct: 101 ggtaccttaagaacggcaggtacgcaaaacgcgttggtgctggcgcacccgtttacttag 160 Query: 288 ccgccgtcctcgagtacct 306 ||||||| ||||||||||| Sbjct: 161 ccgccgtactcgagtacct 179
>ref|XM_785689.1| PREDICTED: Strongylocentrotus purpuratus similar to histone H2A (LOC585884), partial mRNA Length = 366 Score = 46.1 bits (23), Expect = 0.098 Identities = 71/87 (81%) Strand = Plus / Plus Query: 272 gcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgcc 331 ||||| || |||||| | ||||| |||||||||||| |||| ||| | | |||||||| Sbjct: 139 gccccagtgtacctctctgccgtactcgagtacctgaccgctgagatcctcgagctcgct 198 Query: 332 gggaacgccgccaaggacaacaagaag 358 || ||||||||| |||||||||||| Sbjct: 199 ggcaacgccgcccgcgacaacaagaag 225
>gb|AF517875.1| Griffithsia japonica isolate Gj43 histone H2A protein mRNA, complete cds Length = 531 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 194 gccgggctccagttccccgtcggccgcatcg 224 ||||| |||||||||||||||||||| |||| Sbjct: 94 gccggtctccagttccccgtcggccgtatcg 124
>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01, complete sequence Length = 133331 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 411 tcgggaggctgctggccggcgtc 433 ||||||||||||||||||||||| Sbjct: 11189 tcgggaggctgctggccggcgtc 11211
>ref|XM_928387.1| PREDICTED: Homo sapiens similar to Histone H2A.o (H2A/o) (H2A.2) (H2a-615) (LOC653610), mRNA Length = 962 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 346 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 405 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 406 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 444
>emb|CR541872.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0133D for gene HIST2H2AA, histone 2, H2aa; complete cds, without stopcodon Length = 390 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 139 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 198 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 237
>emb|CR536525.1| Homo sapiens full open reading frame cDNA clone RZPDo834G0422D for gene HIST2H2AA, histone 2, H2aa; complete cds, incl. stopcodon Length = 393 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 139 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 198 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 237
>dbj|AB168678.1| Macaca fascicularis testis cDNA clone: QtsA-14092, similar to human histone 2, H2aa (HIST2H2AA), mRNA, RefSeq: NM_003516.2 Length = 778 Score = 46.1 bits (23), Expect = 0.098 Identities = 62/75 (82%) Strand = Plus / Plus Query: 293 gtcctcgagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaac 352 ||||||||||||||| |||||||| | ||||||| || || ||||| || ||||||| Sbjct: 362 gtcctcgagtacctgaccgccgagatcctggagctggcgggcaacgcggctcgggacaac 421 Query: 353 aagaagtcccgcatc 367 |||||| | |||||| Sbjct: 422 aagaagacgcgcatc 436
>gb|BC092032.1| Xenopus laevis hypothetical protein MGC83508, mRNA (cDNA clone MGC:84952 IMAGE:6323734), complete cds Length = 1415 Score = 46.1 bits (23), Expect = 0.098 Identities = 47/55 (85%) Strand = Plus / Plus Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgc 383 ||||| ||||| ||| ||||||||||||| |||||||| | ||| ||||||||| Sbjct: 255 gccggaaacgctgcccgggacaacaagaagacccgcatcatcccccggcacctgc 309 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 193 ggccgggctccagttccccgtcggccgc 220 |||||| |||||||||||||| |||||| Sbjct: 119 ggccggactccagttccccgtaggccgc 146
>ref|XM_577577.1| PREDICTED: Rattus norvegicus similar to Histone H2A.1 (LOC502129), mRNA Length = 393 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 |||||||| || ||||| || ||||| || ||||||||| | |||||| | ||||||| Sbjct: 139 ggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagctg 198 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || | ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcagcgagggacaacaagaagacgcgcatc 237
>ref|XM_225386.2| PREDICTED: Rattus norvegicus histone 1, H2an (predicted) (Hist1h2an_predicted), mRNA Length = 546 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 |||||||| || ||||| || ||||| || ||||||||| | |||||| | ||||||| Sbjct: 139 ggcgccccggtgtacctggcggccgtgctggagtacctgacggccgagatcctggagctg 198 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || | ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcagcgagggacaacaagaagacgcgcatc 237
>gb|AF139873.1|AF139873 Giardia intestinalis histone H2A gene, complete cds Length = 1682 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 275 cccgtctacctcgccgccgtcctcgag 301 |||||||||||||| |||||||||||| Sbjct: 1120 cccgtctacctcgcggccgtcctcgag 1146
>gb|AY063460.1| Helianthus tuberosus cyclin D1 (CycD1;1) mRNA, complete cds Length = 1788 Score = 46.1 bits (23), Expect = 0.098 Identities = 47/55 (85%) Strand = Plus / Plus Query: 162 cgaggaagaagtcggtgacgcggtcggtcaaggccgggctccagttccccgtcgg 216 ||||||||||||| || || ||| ||||| ||||| ||||||||||||||||| Sbjct: 1250 cgaggaagaagtccgtcacaaagtccgtcaaagccggtctccagttccccgtcgg 1304
>gb|AY894055.1| Synthetic construct Homo sapiens clone FLH131281.01L histone 2 H2aa (HIST2H2AA) mRNA, partial cds Length = 393 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 139 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 198 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 237
>gb|AY894054.1| Synthetic construct Homo sapiens clone FLH130836.01L histone 2 H2aa (HIST2H2AA) mRNA, partial cds Length = 393 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 139 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 198 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 237
>gb|BC098171.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:120084 IMAGE:40021706), complete cds Length = 480 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 139 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 198 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 237
>gb|BC096739.1| Homo sapiens histone 2, H2aa, mRNA (cDNA clone MGC:120085 IMAGE:40021707), complete cds Length = 480 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 139 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 198 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 199 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 237
>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete sequence Length = 103264 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 411 tcgggaggctgctggccggcgtc 433 ||||||||||||||||||||||| Sbjct: 48652 tcgggaggctgctggccggcgtc 48674
>gb|AF007101.1|AF007101 Streptomyces hygroscopicus putative pteridine-dependent dioxygenase, PKS modules 1,2,3 and 4, and putative regulatory protein genes, complete cds and putative hydroxylase gene, partial cds Length = 32870 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 303 acctggccgccgagctgttggagctcg 329 |||||| |||||||||||||||||||| Sbjct: 8493 acctgggcgccgagctgttggagctcg 8467
>gb|L19779.1|HUMH2A2A Homo sapiens histone H2A.2 mRNA, complete cds Length = 564 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 192 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 251 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 252 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 290
>gb|J00980.1|XELHIS2AL xenopus laevis h2a histone gene & flanks Length = 748 Score = 46.1 bits (23), Expect = 0.098 Identities = 107/135 (79%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaac 337 ||||| || ||||| || |||||||| ||| |||| ||| | |||||| | ||||| ||| Sbjct: 303 gtctatctggccgcagtgctcgagtatctgaccgctgagatcttggagttggccggcaac 362 Query: 338 gccgccaaggacaacaagaagtcccgcatcgtgcccaggcacctgctcctcgccgtgagg 397 || || ||| ||||| ||| |||||||| | ||||||||||||| ||||| ||| | Sbjct: 363 gctgctcgggataacaaaaagacccgcatcatccccaggcacctgcagctcgctgtgcgc 422 Query: 398 aacgaccaggagctc 412 ||||| |||||||| Sbjct: 423 aacgatgaggagctc 437
>gb|AY131971.1| Homo sapiens histone H2A (HIST2H2AA) gene, complete cds Length = 1173 Score = 46.1 bits (23), Expect = 0.098 Identities = 80/99 (80%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccgagctgttggagctc 328 ||||| ||||||||| | || || ||||||||||| ||| |||||||| | ||||||| Sbjct: 530 ggcgcgcccgtctacatggctgcggtcctcgagtatctgaccgccgagatcctggagctg 589 Query: 329 gccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || || ||||| || ||||||||||||| | |||||| Sbjct: 590 gcgggcaacgcggctcgggacaacaagaagacgcgcatc 628
>gb|AC154391.1| Medicago truncatula chromosome 7 BAC clone mth2-143d17, complete sequence Length = 123865 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 279 tctacctcgccgccgtcctcgagtacctggccgccgag 316 |||||||||||||||| ||||| || || ||||||||| Sbjct: 76229 tctacctcgccgccgttctcgaatatctcgccgccgag 76266
>ref|XM_542055.2| PREDICTED: Canis familiaris similar to zinc finger protein 653, transcript variant 1 (LOC484939), mRNA Length = 1914 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 agggcgcggcgggccgcaaggc 153 |||||||||||||||||||||| Sbjct: 208 agggcgcggcgggccgcaaggc 229
>ref|XM_848511.1| PREDICTED: Canis familiaris similar to zinc finger protein 653, transcript variant 2 (LOC484939), mRNA Length = 2233 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 agggcgcggcgggccgcaaggc 153 |||||||||||||||||||||| Sbjct: 208 agggcgcggcgggccgcaaggc 229
>emb|X01064.1|SGHIS2A3 Rainbow trout histone H2A and H3 genes Length = 2597 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 194 gccgggctccagttccccgtcggccg 219 |||||||||||||||||||| ||||| Sbjct: 427 gccgggctccagttccccgtgggccg 452
>emb|AJ010974.1|LLO010974 Lilium longiflorum mRNA for generative cell-specific histone H2A Length = 581 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 gcccccgtctacctcgccgccgtcct 297 |||||||||||||| ||||||||||| Sbjct: 190 gcccccgtctacctagccgccgtcct 215
>dbj|AB175889.1| Lilium longiflorum gH2A gene for male gametic cell-specific histone H2A, complete cds Length = 3401 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 gcccccgtctacctcgccgccgtcct 297 |||||||||||||| ||||||||||| Sbjct: 3030 gcccccgtctacctagccgccgtcct 3055
>emb|BX833247.1|CNS09Z82 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL40ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 644 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 278 gtctacctcgccgccgtcctcgagta 303 ||||| |||||||||||||||||||| Sbjct: 210 gtctatctcgccgccgtcctcgagta 235
>dbj|AB003782.1| Lilium longiflorum mRNA for gH2A.2, complete cds Length = 601 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 gcccccgtctacctcgccgccgtcct 297 |||||||||||||| ||||||||||| Sbjct: 148 gcccccgtctacctagccgccgtcct 173
>dbj|AB003781.1| Lilium longiflorum mRNA for gH2A.1, complete cds Length = 588 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 gcccccgtctacctcgccgccgtcct 297 |||||||||||||| ||||||||||| Sbjct: 145 gcccccgtctacctagccgccgtcct 170
>ref|XM_551996.1| Anopheles gambiae str. PEST ENSANGP00000029020 (ENSANGG00000023190), partial mRNA Length = 297 Score = 44.1 bits (22), Expect = 0.39 Identities = 46/54 (85%) Strand = Plus / Plus Query: 256 gcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggc 309 ||||||||| ||||||| |||||||| || ||||| ||| | ||||||||||| Sbjct: 48 gcgcgtcggagcgggcgcgcccgtctatctggccgcggtcatggagtacctggc 101
>gb|AF090826.1|AF090826 Lilium longiflorum histone H2A-like (H2A) mRNA sequence Length = 587 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 gcccccgtctacctcgccgccgtcct 297 |||||||||||||| ||||||||||| Sbjct: 190 gcccccgtctacctagccgccgtcct 215
>gb|AF013803.1| Pinus taeda H2A homolog (lp15) gene, complete cds Length = 781 Score = 44.1 bits (22), Expect = 0.39 Identities = 64/78 (82%) Strand = Plus / Plus Query: 281 tacctcgccgccgtcctcgagtacctggccgccgagctgttggagctcgccgggaacgcc 340 |||||||| ||||| || || |||||||| |||||| || |||| || || || ||||| Sbjct: 229 tacctcgcggccgttcttgaatacctggcagccgaggtgctggaactggcaggtaacgct 288 Query: 341 gccaaggacaacaagaag 358 ||| ||||||||||||| Sbjct: 289 gcccgggacaacaagaag 306
>gb|AE010418.1| Methanopyrus kandleri AV19 section 117 of 157 of the complete genome Length = 10261 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 gaaggggaagaagggcgcggc 141 ||||||||||||||||||||| Sbjct: 9479 gaaggggaagaagggcgcggc 9459
>gb|DQ214188.1| Taeniopygia guttata clone 0058P0024E05 histone 1 H2ai-like mRNA, complete sequence Length = 786 Score = 42.1 bits (21), Expect = 1.5 Identities = 129/165 (78%) Strand = Plus / Plus Query: 248 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 307 |||||| ||||||| ||| | ||||| || || ||||| || ||||| || ||||||||| Sbjct: 201 tacgcggagcgcgtgggcgccggcgcgccggtgtacctggcggccgtgctggagtacctg 260 Query: 308 gccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 | |||||| | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 261 acggccgagatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 320 Query: 368 gtgcccaggcacctgctcctcgccgtgaggaacgaccaggagctc 412 | ||| | ||||||| |||||| | | |||||| |||||||| Sbjct: 321 atcccccgccacctgcagctcgccatccgcaacgacgaggagctc 365 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 193 ggccgggctccagttccccgtcggccgc 220 ||||||||| ||||||||||| |||||| Sbjct: 146 ggccgggctgcagttccccgtgggccgc 173
>gb|DQ214187.1| Taeniopygia guttata clone 0058P0044E04 histone 1 H2ai-like mRNA, complete sequence Length = 786 Score = 42.1 bits (21), Expect = 1.5 Identities = 129/165 (78%) Strand = Plus / Plus Query: 248 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 307 |||||| ||||||| ||| | ||||| || || ||||| || ||||| || ||||||||| Sbjct: 201 tacgcggagcgcgtgggcgccggcgcgccggtgtacctggcggccgtgctggagtacctg 260 Query: 308 gccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 | |||||| | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 261 acggccgagatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 320 Query: 368 gtgcccaggcacctgctcctcgccgtgaggaacgaccaggagctc 412 | ||| | ||||||| |||||| | | |||||| |||||||| Sbjct: 321 atcccccgccacctgcagctcgccatccgcaacgacgaggagctc 365 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 193 ggccgggctccagttccccgtcggccgc 220 ||||||||| ||||||||||| |||||| Sbjct: 146 ggccgggctgcagttccccgtgggccgc 173
>ref|XM_518289.1| PREDICTED: Pan troglodytes similar to Histone H2A.g (H2A/g) (H2A.3) (LOC462493), mRNA Length = 1052 Score = 42.1 bits (21), Expect = 1.5 Identities = 57/69 (82%) Strand = Plus / Plus Query: 299 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||||| |||||||| | ||||||| || || ||||| ||| |||||||||||| Sbjct: 219 gagtacctgaccgccgagattctggagctggcgggcaacgcggcccgcgacaacaagaag 278 Query: 359 tcccgcatc 367 |||||||| Sbjct: 279 acccgcatc 287
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 cggcgggccgcaaggccggcg 158 ||||||||||||||||||||| Sbjct: 281104 cggcgggccgcaaggccggcg 281084
>ref|XM_870473.1| PREDICTED: Bos taurus similar to Histone H2A.1 (LOC618147), mRNA Length = 434 Score = 42.1 bits (21), Expect = 1.5 Identities = 57/69 (82%) Strand = Plus / Plus Query: 299 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||||| | |||||| | ||||| || || || ||||| ||| ||||||||||||| Sbjct: 210 gagtacctgacagccgagatcttggaactggcgggaaacgcagcccgggacaacaagaag 269 Query: 359 tcccgcatc 367 |||||||| Sbjct: 270 acccgcatc 278
>ref|NM_175065.2| Homo sapiens histone 2, H2ab (HIST2H2AB), mRNA Length = 448 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Plus Query: 248 tacgcgaagcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctg 307 |||||| |||| ||||| | |||||||| || ||||| || || ||||||||||||||| Sbjct: 118 tacgcggagcgggtcggggcaggcgccccggtgtacctggcggcggtcctcgagtacctg 177 Query: 308 gccgc 312 |||| Sbjct: 178 accgc 182
>gb|AC034285.6| Mus musculus chromosome 13, clone RP23-220G21, complete sequence Length = 209720 Score = 42.1 bits (21), Expect = 1.5 Identities = 90/113 (79%) Strand = Plus / Minus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 101343 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 101284 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 101283 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 101231 Score = 42.1 bits (21), Expect = 1.5 Identities = 90/113 (79%) Strand = Plus / Plus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 64394 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 64453 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 64454 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 64506 Score = 42.1 bits (21), Expect = 1.5 Identities = 90/113 (79%) Strand = Plus / Minus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 60783 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 60724 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 60723 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 60671
>ref|NG_002734.1| Mus musculus histone 1, H2aj (Hist1h2aj) pseudogene on chromosome 13 Length = 1357 Score = 42.1 bits (21), Expect = 1.5 Identities = 90/113 (79%) Strand = Plus / Plus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 607 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 666 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 667 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 719
>gb|AC152348.7| Medicago truncatula clone mth2-52e17, complete sequence Length = 122070 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 ctccagttccccgtcggccgcatcg 224 |||||||||||||| |||||||||| Sbjct: 6938 ctccagttccccgttggccgcatcg 6962
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 aggctgctggccggcgtcaccatcg 440 |||||||| |||||||||||||||| Sbjct: 765535 aggctgcttgccggcgtcaccatcg 765511
>ref|XM_963991.1| PREDICTED: Tribolium castaneum similar to CG2812-PA (LOC657535), partial mRNA Length = 3949 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 ccgcatcgggcggtacctcaa 237 ||||||||||||||||||||| Sbjct: 2407 ccgcatcgggcggtacctcaa 2387
>emb|X80330.1|CLH2A232 C.longicaudatus genes for histones H2a.2 and H3.2 Length = 2927 Score = 42.1 bits (21), Expect = 1.5 Identities = 57/69 (82%) Strand = Plus / Plus Query: 299 gagtacctggccgccgagctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 ||||||||| |||||||| | ||||||| || || ||||| ||| |||||||||||| Sbjct: 1169 gagtacctgaccgccgagatcctggagctggcgggcaacgcggcccgcgacaacaagaag 1228 Query: 359 tcccgcatc 367 |||||||| Sbjct: 1229 acccgcatc 1237
>emb|X05862.1|MMHIS2BA Mouse H2B and H2A histone genes (291A) Length = 1797 Score = 42.1 bits (21), Expect = 1.5 Identities = 90/113 (79%) Strand = Plus / Plus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 1074 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 1133 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 1134 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 1186
>gb|BC099406.1| Mus musculus histone 1, H2ac, mRNA (cDNA clone MGC:117571 IMAGE:30789778), complete cds Length = 1075 Score = 42.1 bits (21), Expect = 1.5 Identities = 90/113 (79%) Strand = Plus / Plus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 135 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 194 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 195 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 247
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 133 gggcgcggcgggccgcaaggccggc 157 ||||||||| ||||||||||||||| Sbjct: 53856 gggcgcggctggccgcaaggccggc 53880
>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11, DP09G08, DP35C12 of chromosome 5 of Podospora anserina Length = 322194 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 275 cccgtctacctcgccgccgtcctcgagtacctggccgccga 315 ||||||||||||||||| || || |||||||| || ||||| Sbjct: 20127 cccgtctacctcgccgctgttcttgagtacctcgctgccga 20087
>emb|AL589651.8| Mouse DNA sequence from clone RP23-138F20 on chromosome 13 Contains five genes for olfactory receptors, a novel gene, the H1f5 gene for H1 histone family member 5, three genes and one pseudogene for H2a histone family members, four genes for H2b, two genes for H4, and two genes for H3 histone family members and seven CpG islands, complete sequence Length = 222823 Score = 42.1 bits (21), Expect = 1.5 Identities = 90/113 (79%) Strand = Plus / Minus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 208084 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 208025 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 208024 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 207972 Score = 42.1 bits (21), Expect = 1.5 Identities = 90/113 (79%) Strand = Plus / Minus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 142685 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 142626 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 142625 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 142573 Score = 40.1 bits (20), Expect = 6.0 Identities = 83/104 (79%) Strand = Plus / Minus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 174693 agcgcgtgggcgccggcgccccggtgtacctggcagccgtgctagagtacctgacggccg 174634 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaag 358 || | ||||||| || || ||||| ||| |||||||||||| Sbjct: 174633 agatcctggagctggcgggcaacgcggcccgcgacaacaagaag 174590
>emb|AL590388.4| Mouse DNA sequence from clone RP23-480B19 on chromosome 13 Contains the Slc17a1 gene for solute carrier family 17 (vesicular glutamate transporter) member 1, two genes for novel solute carrier family 17 (Slc17) members, two novel genes, the gene for a novel C3HC4 type zinc finger (ring finger) protein, the gene for an H2a, an H2b, two genes for H3 and two genes for H4 histone family members, a H2a histone family pseudogene, the H1f1 and H1f2 genes for H1 histone family members 1 and 2, the H3f2 gene for H3 histone family, member 2 (H3.2), a novel pseudogene, the Hfe gene for hemochromatosis protein (Mr2) and two CpG islands, complete sequence Length = 186062 Score = 42.1 bits (21), Expect = 1.5 Identities = 90/113 (79%) Strand = Plus / Minus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 137121 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 137062 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 137061 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 137009
>emb|AJ494854.1|ODI494854 Oikopleura dioica partial mRNA for histone h2A.1b (H2a.1b gene) Length = 544 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 269 ggcgcccccgtctacctcgccgccgtcct 297 ||||| || |||||||||||||||||||| Sbjct: 115 ggcgcaccagtctacctcgccgccgtcct 143
>gb|BC076498.1| Mus musculus histone 1, H2ae, mRNA (cDNA clone MGC:90847 IMAGE:5713252), complete cds Length = 492 Score = 42.1 bits (21), Expect = 1.5 Identities = 90/113 (79%) Strand = Plus / Plus Query: 255 agcgcgtcggcacgggcgcccccgtctacctcgccgccgtcctcgagtacctggccgccg 314 ||||||| ||| | |||||||| || ||||| || ||||| || ||||||||| | |||| Sbjct: 155 agcgcgtgggcgccggcgccccggtgtacctggcggccgtgctggagtacctgacggccg 214 Query: 315 agctgttggagctcgccgggaacgccgccaaggacaacaagaagtcccgcatc 367 || | ||||||| || || ||||| ||| |||||||||||| | |||||| Sbjct: 215 agatcctggagctggcgggcaacgcggcccgcgacaacaagaagacgcgcatc 267
>gb|DQ397869.1| Cenarchaeum symbiosum clone C04C05, complete sequence Length = 40287 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 aggagctcgggaggctgctggccggcgtc 433 ||||||||| ||||||||||||| ||||| Sbjct: 1312 aggagctcgagaggctgctggcccgcgtc 1340
>gb|AC160836.12| Medicago truncatula clone mth2-115l23, complete sequence Length = 116158 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 ctccagttccccgtcggccgcatcg 224 |||||||||||||| |||||||||| Sbjct: 42115 ctccagttccccgttggccgcatcg 42091 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,960,731 Number of Sequences: 3902068 Number of extensions: 2960731 Number of successful extensions: 62331 Number of sequences better than 10.0: 434 Number of HSP's better than 10.0 without gapping: 435 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 58342 Number of HSP's gapped (non-prelim): 3961 length of query: 449 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 427 effective length of database: 17,147,199,772 effective search space: 7321854302644 effective search space used: 7321854302644 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
