| Clone Name | bast71b12 |
|---|---|
| Clone Library Name | barley_pub |
>RPT3_ARATH (Q9FMF5) Root phototropism protein 3 (Non-phototropic hypocotyl| protein 3) Length = 745 Score = 56.2 bits (134), Expect = 2e-08 Identities = 20/43 (46%), Positives = 36/43 (83%) Frame = +1 Query: 94 GEAWFCTTGLPSDVVFEVQDMSFHLHKFPVMSKSRKISRMLAE 222 G++WF T +PSD++ ++ DM+FHLHK+P++S+S K++R++ E Sbjct: 42 GQSWFVATDIPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYE 84
>NPH3_ORYSA (Q5KS50) Coleoptile phototropism protein 1 (Non-phototropic| hypocotyl 3-like protein) (NPH3-like protein) Length = 762 Score = 45.8 bits (107), Expect = 3e-05 Identities = 17/45 (37%), Positives = 34/45 (75%) Frame = +1 Query: 88 RGGEAWFCTTGLPSDVVFEVQDMSFHLHKFPVMSKSRKISRMLAE 222 R +W+ + +PSD++ +V D++F+LHK+P++S+S ++SR + E Sbjct: 38 RRDRSWYVNSDIPSDLLVKVGDVNFYLHKYPMISRSGRMSRAVYE 82
>RPT2_ARATH (Q682S0) Root phototropism protein 2| Length = 593 Score = 41.2 bits (95), Expect = 6e-04 Identities = 22/58 (37%), Positives = 34/58 (58%) Frame = +1 Query: 58 SSSAARHGPSRGGEAWFCTTGLPSDVVFEVQDMSFHLHKFPVMSKSRKISRMLAEQDE 231 SSS AR G W + +P+DVV EV + +F LHKF +++KS I +++ E + Sbjct: 15 SSSLARTGQ------WVFSQDIPTDVVVEVGEANFSLHKFMLVAKSNYIRKLIMESKD 66
>CB027_HUMAN (Q580R0) Protein C2orf27| Length = 203 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = -3 Query: 167 RWKLMSCTSNTTSLGS---PVVQNHASPPLDGPCRAADEDDMAGRPSCRC 27 +WK +S ++ + P V+ +P D P A E + A PSCRC Sbjct: 4 KWKQLSAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRC 53
>PYRG_CHLCV (Q822T2) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP| synthetase) Length = 537 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = +1 Query: 106 FCTTGLPSDVVFEVQDMSFHLHKFPVMSKSRKISRMLAEQ 225 FC +P VF V D+ +++ P+M KIS + E+ Sbjct: 228 FCN--VPDSAVFNVVDVEHSIYEMPLMLSREKISTFITEK 265
>SORC1_HUMAN (Q8WY21) VPS10 domain-containing receptor SorCS1 precursor (hSorCS)| Length = 1168 Score = 27.7 bits (60), Expect = 7.0 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -1 Query: 181 PGTCGDGSSCPAP 143 PG CG GS CP+P Sbjct: 29 PGVCGGGSCCPSP 41
>H6ST3_HUMAN (Q8IZP7) Heparan-sulfate 6-O-sulfotransferase 3 (EC 2.8.2.-)| (HS6ST-3) Length = 471 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -3 Query: 173 LWRWKLMSCTSNTTSLGSPVVQNHASPP-LDGPCRAA 66 ++++ SCTS+ T+LG A PP + GP R A Sbjct: 22 MYQYVSPSCTSSCTNLGEQPRAGEAGPPAVPGPARRA 58
>ZN621_HUMAN (Q6ZSS3) Zinc finger protein 621| Length = 439 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +1 Query: 79 GPSRGGEAWFCTTGLPSDVVFEVQDMSFHLHKFPVMSKSRKISR 210 G S+GGE+W GL V+ + LH+ PV R +S+ Sbjct: 83 GISQGGESWIKNEGL---VIKQEASEETELHRMPVGGLLRNVSQ 123
>INSI1_CRIGR (Q8CFA6) Insulin-induced gene 1 protein (INSIG-1)| Length = 257 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +3 Query: 69 GAARPVQGRRGVVLHHRAAQRRCVRGAGHELPSPQVP 179 GAARP RG++ A RC +G+G P+P+ P Sbjct: 15 GAARPHSLPRGMI-----AAARCPQGSGAPEPAPRSP 46 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,797,852 Number of Sequences: 219361 Number of extensions: 570123 Number of successful extensions: 2045 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1999 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2044 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)