ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast71b06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 551 bits (278), Expect = e-154 Identities = 416/462 (90%) Strand = Plus / Plus Query: 38 acccaaaccctaaccctcgaatcgaagcaaccagccggcggcgatggggcagggttctcc 97 ||||||||||||||||||||| ||| |||||| |||||||||||||||||||| |||| Sbjct: 10434471 acccaaaccctaaccctcgaagcgacgcaacccaccggcggcgatggggcagggcactcc 10434530 Query: 98 gggcggcatgggcaagcagggcggtctccccggtgaccgcaagccaggcgacggtgccgc 157 ||||| ||||| ||||||||||| |||||||| || |||||||| |||||||| | ||| Sbjct: 10434531 cggcgggatggggaagcagggcggcctccccggcgatcgcaagccgggcgacggcggcgc 10434590 Query: 158 cggcgacaagaaggacaagaagttcgagccgcccgccgccccgtcgcgcgtgggccgcaa 217 |||||||||||||||| ||||||||||| |||||||| ||||| ||||| ||||| || Sbjct: 10434591 cggcgacaagaaggaccgcaagttcgagccccccgccgcgccgtcccgcgtcggccggaa 10434650 Query: 218 gcagcggaaacagaggggccccgaggcggcggcgcggctgccccccgtggctccgctctc 277 ||||||||| |||| ||| ||||||||||||||||| |||||| ||||||| |||||||| Sbjct: 10434651 gcagcggaagcagaaggggcccgaggcggcggcgcgcctgcccgccgtggcgccgctctc 10434710 Query: 278 caagtgccgcctccgccttctcaagctggaccgcgtcaaggactaccttctcatggagga 337 |||||||||||||||| | ||||||||||| || |||||||||||||| ||||||||||| Sbjct: 10434711 caagtgccgcctccgcttgctcaagctggagcgggtcaaggactacctcctcatggagga 10434770 Query: 338 ggagttcgtcgcgagccaggagcggctgcgccccagcgaagacaagacggaggaggaccg 397 ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 10434771 ggagttcgtcgtcagccaggagcggctgcgacccagcgaggacaagacggaggaggaccg 10434830 Query: 398 atctaaggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcat 457 ||| |||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 10434831 atccaaggtcgatgacctccggggcacccccatgagcgttggctcgcttgaggagatcat 10434890 Query: 458 cgacgagagccacgcgatcgtctcgtcgtccgttgggccgga 499 ||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 10434891 cgatgagagccacgccatcgtctcgtcgtccgtcgggccgga 10434932 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 gccgccggcgacaagaaggacaag 176 |||||||||| ||||||||||||| Sbjct: 18501236 gccgccggcggcaagaaggacaag 18501213
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 551 bits (278), Expect = e-154 Identities = 416/462 (90%) Strand = Plus / Plus Query: 38 acccaaaccctaaccctcgaatcgaagcaaccagccggcggcgatggggcagggttctcc 97 ||||||||||||||||||||| ||| |||||| |||||||||||||||||||| |||| Sbjct: 91024 acccaaaccctaaccctcgaagcgacgcaacccaccggcggcgatggggcagggcactcc 91083 Query: 98 gggcggcatgggcaagcagggcggtctccccggtgaccgcaagccaggcgacggtgccgc 157 ||||| ||||| ||||||||||| |||||||| || |||||||| |||||||| | ||| Sbjct: 91084 cggcgggatggggaagcagggcggcctccccggcgatcgcaagccgggcgacggcggcgc 91143 Query: 158 cggcgacaagaaggacaagaagttcgagccgcccgccgccccgtcgcgcgtgggccgcaa 217 |||||||||||||||| ||||||||||| |||||||| ||||| ||||| ||||| || Sbjct: 91144 cggcgacaagaaggaccgcaagttcgagccccccgccgcgccgtcccgcgtcggccggaa 91203 Query: 218 gcagcggaaacagaggggccccgaggcggcggcgcggctgccccccgtggctccgctctc 277 ||||||||| |||| ||| ||||||||||||||||| |||||| ||||||| |||||||| Sbjct: 91204 gcagcggaagcagaaggggcccgaggcggcggcgcgcctgcccgccgtggcgccgctctc 91263 Query: 278 caagtgccgcctccgccttctcaagctggaccgcgtcaaggactaccttctcatggagga 337 |||||||||||||||| | ||||||||||| || |||||||||||||| ||||||||||| Sbjct: 91264 caagtgccgcctccgcttgctcaagctggagcgggtcaaggactacctcctcatggagga 91323 Query: 338 ggagttcgtcgcgagccaggagcggctgcgccccagcgaagacaagacggaggaggaccg 397 ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 91324 ggagttcgtcgtcagccaggagcggctgcgacccagcgaggacaagacggaggaggaccg 91383 Query: 398 atctaaggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcat 457 ||| |||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 91384 atccaaggtcgatgacctccggggcacccccatgagcgttggctcgcttgaggagatcat 91443 Query: 458 cgacgagagccacgcgatcgtctcgtcgtccgttgggccgga 499 ||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 91444 cgatgagagccacgccatcgtctcgtcgtccgtcgggccgga 91485
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 551 bits (278), Expect = e-154 Identities = 416/462 (90%) Strand = Plus / Plus Query: 38 acccaaaccctaaccctcgaatcgaagcaaccagccggcggcgatggggcagggttctcc 97 ||||||||||||||||||||| ||| |||||| |||||||||||||||||||| |||| Sbjct: 10432572 acccaaaccctaaccctcgaagcgacgcaacccaccggcggcgatggggcagggcactcc 10432631 Query: 98 gggcggcatgggcaagcagggcggtctccccggtgaccgcaagccaggcgacggtgccgc 157 ||||| ||||| ||||||||||| |||||||| || |||||||| |||||||| | ||| Sbjct: 10432632 cggcgggatggggaagcagggcggcctccccggcgatcgcaagccgggcgacggcggcgc 10432691 Query: 158 cggcgacaagaaggacaagaagttcgagccgcccgccgccccgtcgcgcgtgggccgcaa 217 |||||||||||||||| ||||||||||| |||||||| ||||| ||||| ||||| || Sbjct: 10432692 cggcgacaagaaggaccgcaagttcgagccccccgccgcgccgtcccgcgtcggccggaa 10432751 Query: 218 gcagcggaaacagaggggccccgaggcggcggcgcggctgccccccgtggctccgctctc 277 ||||||||| |||| ||| ||||||||||||||||| |||||| ||||||| |||||||| Sbjct: 10432752 gcagcggaagcagaaggggcccgaggcggcggcgcgcctgcccgccgtggcgccgctctc 10432811 Query: 278 caagtgccgcctccgccttctcaagctggaccgcgtcaaggactaccttctcatggagga 337 |||||||||||||||| | ||||||||||| || |||||||||||||| ||||||||||| Sbjct: 10432812 caagtgccgcctccgcttgctcaagctggagcgggtcaaggactacctcctcatggagga 10432871 Query: 338 ggagttcgtcgcgagccaggagcggctgcgccccagcgaagacaagacggaggaggaccg 397 ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 10432872 ggagttcgtcgtcagccaggagcggctgcgacccagcgaggacaagacggaggaggaccg 10432931 Query: 398 atctaaggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcat 457 ||| |||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 10432932 atccaaggtcgatgacctccggggcacccccatgagcgttggctcgcttgaggagatcat 10432991 Query: 458 cgacgagagccacgcgatcgtctcgtcgtccgttgggccgga 499 ||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 10432992 cgatgagagccacgccatcgtctcgtcgtccgtcgggccgga 10433033 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 gccgccggcgacaagaaggacaag 176 |||||||||| ||||||||||||| Sbjct: 18495277 gccgccggcggcaagaaggacaag 18495254
>dbj|AK069811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030D05, full insert sequence Length = 1579 Score = 551 bits (278), Expect = e-154 Identities = 416/462 (90%) Strand = Plus / Plus Query: 38 acccaaaccctaaccctcgaatcgaagcaaccagccggcggcgatggggcagggttctcc 97 ||||||||||||||||||||| ||| |||||| |||||||||||||||||||| |||| Sbjct: 36 acccaaaccctaaccctcgaagcgacgcaacccaccggcggcgatggggcagggcactcc 95 Query: 98 gggcggcatgggcaagcagggcggtctccccggtgaccgcaagccaggcgacggtgccgc 157 ||||| ||||| ||||||||||| |||||||| || |||||||| |||||||| | ||| Sbjct: 96 cggcgggatggggaagcagggcggcctccccggcgatcgcaagccgggcgacggcggcgc 155 Query: 158 cggcgacaagaaggacaagaagttcgagccgcccgccgccccgtcgcgcgtgggccgcaa 217 |||||||||||||||| ||||||||||| |||||||| ||||| ||||| ||||| || Sbjct: 156 cggcgacaagaaggaccgcaagttcgagccccccgccgcgccgtcccgcgtcggccggaa 215 Query: 218 gcagcggaaacagaggggccccgaggcggcggcgcggctgccccccgtggctccgctctc 277 ||||||||| |||| ||| ||||||||||||||||| |||||| ||||||| |||||||| Sbjct: 216 gcagcggaagcagaaggggcccgaggcggcggcgcgcctgcccgccgtggcgccgctctc 275 Query: 278 caagtgccgcctccgccttctcaagctggaccgcgtcaaggactaccttctcatggagga 337 |||||||||||||||| | ||||||||||| || |||||||||||||| ||||||||||| Sbjct: 276 caagtgccgcctccgcttgctcaagctggagcgggtcaaggactacctcctcatggagga 335 Query: 338 ggagttcgtcgcgagccaggagcggctgcgccccagcgaagacaagacggaggaggaccg 397 ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 336 ggagttcgtcgtcagccaggagcggctgcgacccagcgaggacaagacggaggaggaccg 395 Query: 398 atctaaggtcgacgacctccgcggcacccctatgagcgttggctcgctcgaggagatcat 457 ||| |||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 396 atccaaggtcgatgacctccggggcacccccatgagcgttggctcgcttgaggagatcat 455 Query: 458 cgacgagagccacgcgatcgtctcgtcgtccgttgggccgga 499 ||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 456 cgatgagagccacgccatcgtctcgtcgtccgtcgggccgga 497
>dbj|AB037154.1| Oryza sativa (japonica cultivar-group) OsRPT2b mRNA for 26S proteasome regulatory particle triple-A ATPase subunit2b, complete cds Length = 1616 Score = 515 bits (260), Expect = e-143 Identities = 386/428 (90%) Strand = Plus / Plus Query: 72 ccggcggcgatggggcagggttctccgggcggcatgggcaagcagggcggtctccccggt 131 |||||||||||||||||||| |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 14 ccggcggcgatggggcagggcactcccggcgggatggggaagcagggcggcctccccggc 73 Query: 132 gaccgcaagccaggcgacggtgccgccggcgacaagaaggacaagaagttcgagccgccc 191 || |||||||| |||||||| | ||||||||||||||||||| ||||||||||| ||| Sbjct: 74 gatcgcaagccgggcgacggcggcgccggcgacaagaaggaccgcaagttcgagcccccc 133 Query: 192 gccgccccgtcgcgcgtgggccgcaagcagcggaaacagaggggccccgaggcggcggcg 251 ||||| ||||| ||||| ||||| ||||||||||| |||| ||| ||||||||||||||| Sbjct: 134 gccgcgccgtcccgcgtcggccggaagcagcggaagcagaaggggcccgaggcggcggcg 193 Query: 252 cggctgccccccgtggctccgctctccaagtgccgcctccgccttctcaagctggaccgc 311 || |||||| ||||||| |||||||||||||||||||||||| | ||||||||||| || Sbjct: 194 cgcctgcccgccgtggcgccgctctccaagtgccgcctccgcttgctcaagctggagcgg 253 Query: 312 gtcaaggactaccttctcatggaggaggagttcgtcgcgagccaggagcggctgcgcccc 371 |||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 254 gtcaaggactacctcctcatggaggaggagttcgtcgtcagccaggagcggctgcgaccc 313 Query: 372 agcgaagacaagacggaggaggaccgatctaaggtcgacgacctccgcggcacccctatg 431 ||||| ||||||||||||||||||||||| |||||||| |||||||| |||||||| ||| Sbjct: 314 agcgaggacaagacggaggaggaccgatccaaggtcgatgacctccggggcacccccatg 373 Query: 432 agcgttggctcgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgtt 491 |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 374 agcgttggctcgcttgaggagatcatcgatgagagccacgccatcgtctcgtcgtccgtc 433 Query: 492 gggccgga 499 |||||||| Sbjct: 434 gggccgga 441
>ref|NM_185558.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1597 Score = 355 bits (179), Expect = 9e-95 Identities = 352/410 (85%), Gaps = 6/410 (1%) Strand = Plus / Plus Query: 81 atggggcagggttctccgggcggcatgggcaagcagggcggtctccccggtgaccgcaag 140 ||||||||||| | ||||| |||||||||||||||||||| |||||| ||||||||| Sbjct: 93 atggggcagggcaccccgggaggcatgggcaagcagggcggcgcccccggcgaccgcaag 152 Query: 141 ccaggcgacggtgccgccggcgacaagaaggacaagaagttcgagccgcccgccgccccg 200 || |||| || |||||||||||||||| ||||||||||| ||||||||||| Sbjct: 153 cctggcggcga------cggcgacaagaaggaccgcaagttcgagccccccgccgccccc 206 Query: 201 tcgcgcgtgggccgcaagcagcggaaacagaggggccccgaggcggcggcgcggctgccc 260 || ||||| |||||||||||||| || |||| ||||||||||||||| || || || ||| Sbjct: 207 tcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctcccc 266 Query: 261 cccgtggctccgctctccaagtgccgcctccgccttctcaagctggaccgcgtcaaggac 320 ||| || || ||||||||||||||||||||||| |||||||| || || ||||||||| Sbjct: 267 aacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaaggac 326 Query: 321 taccttctcatggaggaggagttcgtcgcgagccaggagcggctgcgccccagcgaagac 380 ||||| ||||||||||||||||||||||| ||||||||| || ||||||| ||| ||| Sbjct: 327 tacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgaggac 386 Query: 381 aagacggaggaggaccgatctaaggtcgacgacctccgcggcacccctatgagcgttggc 440 ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 387 aagaccgaggaggaccgatccaaggtcgacgacctccgcggcacccccatgagcgtcgga 446 Query: 441 tcgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgt 490 || |||||||||||||||||||||||||| || |||||||| || ||||| Sbjct: 447 tccctcgaggagatcatcgacgagagccatgccatcgtctcctcctccgt 496
>ref|XM_507415.1| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA Length = 1599 Score = 355 bits (179), Expect = 9e-95 Identities = 352/410 (85%), Gaps = 6/410 (1%) Strand = Plus / Plus Query: 81 atggggcagggttctccgggcggcatgggcaagcagggcggtctccccggtgaccgcaag 140 ||||||||||| | ||||| |||||||||||||||||||| |||||| ||||||||| Sbjct: 92 atggggcagggcaccccgggaggcatgggcaagcagggcggcgcccccggcgaccgcaag 151 Query: 141 ccaggcgacggtgccgccggcgacaagaaggacaagaagttcgagccgcccgccgccccg 200 || |||| || |||||||||||||||| ||||||||||| ||||||||||| Sbjct: 152 cctggcggcga------cggcgacaagaaggaccgcaagttcgagccccccgccgccccc 205 Query: 201 tcgcgcgtgggccgcaagcagcggaaacagaggggccccgaggcggcggcgcggctgccc 260 || ||||| |||||||||||||| || |||| ||||||||||||||| || || || ||| Sbjct: 206 tcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctcccc 265 Query: 261 cccgtggctccgctctccaagtgccgcctccgccttctcaagctggaccgcgtcaaggac 320 ||| || || ||||||||||||||||||||||| |||||||| || || ||||||||| Sbjct: 266 aacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaaggac 325 Query: 321 taccttctcatggaggaggagttcgtcgcgagccaggagcggctgcgccccagcgaagac 380 ||||| ||||||||||||||||||||||| ||||||||| || ||||||| ||| ||| Sbjct: 326 tacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgaggac 385 Query: 381 aagacggaggaggaccgatctaaggtcgacgacctccgcggcacccctatgagcgttggc 440 ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 386 aagaccgaggaggaccgatccaaggtcgacgacctccgcggcacccccatgagcgtcgga 445 Query: 441 tcgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgt 490 || |||||||||||||||||||||||||| || |||||||| || ||||| Sbjct: 446 tccctcgaggagatcatcgacgagagccatgccatcgtctcctcctccgt 495
>ref|XM_506590.2| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA Length = 1615 Score = 355 bits (179), Expect = 9e-95 Identities = 352/410 (85%), Gaps = 6/410 (1%) Strand = Plus / Plus Query: 81 atggggcagggttctccgggcggcatgggcaagcagggcggtctccccggtgaccgcaag 140 ||||||||||| | ||||| |||||||||||||||||||| |||||| ||||||||| Sbjct: 92 atggggcagggcaccccgggaggcatgggcaagcagggcggcgcccccggcgaccgcaag 151 Query: 141 ccaggcgacggtgccgccggcgacaagaaggacaagaagttcgagccgcccgccgccccg 200 || |||| || |||||||||||||||| ||||||||||| ||||||||||| Sbjct: 152 cctggcggcga------cggcgacaagaaggaccgcaagttcgagccccccgccgccccc 205 Query: 201 tcgcgcgtgggccgcaagcagcggaaacagaggggccccgaggcggcggcgcggctgccc 260 || ||||| |||||||||||||| || |||| ||||||||||||||| || || || ||| Sbjct: 206 tcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctcccc 265 Query: 261 cccgtggctccgctctccaagtgccgcctccgccttctcaagctggaccgcgtcaaggac 320 ||| || || ||||||||||||||||||||||| |||||||| || || ||||||||| Sbjct: 266 aacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaaggac 325 Query: 321 taccttctcatggaggaggagttcgtcgcgagccaggagcggctgcgccccagcgaagac 380 ||||| ||||||||||||||||||||||| ||||||||| || ||||||| ||| ||| Sbjct: 326 tacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgaggac 385 Query: 381 aagacggaggaggaccgatctaaggtcgacgacctccgcggcacccctatgagcgttggc 440 ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 386 aagaccgaggaggaccgatccaaggtcgacgacctccgcggcacccccatgagcgtcgga 445 Query: 441 tcgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgt 490 || |||||||||||||||||||||||||| || |||||||| || ||||| Sbjct: 446 tccctcgaggagatcatcgacgagagccatgccatcgtctcctcctccgt 495
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 355 bits (179), Expect = 9e-95 Identities = 352/410 (85%), Gaps = 6/410 (1%) Strand = Plus / Minus Query: 81 atggggcagggttctccgggcggcatgggcaagcagggcggtctccccggtgaccgcaag 140 ||||||||||| | ||||| |||||||||||||||||||| |||||| ||||||||| Sbjct: 29386461 atggggcagggcaccccgggaggcatgggcaagcagggcggcgcccccggcgaccgcaag 29386402 Query: 141 ccaggcgacggtgccgccggcgacaagaaggacaagaagttcgagccgcccgccgccccg 200 || |||| || |||||||||||||||| ||||||||||| ||||||||||| Sbjct: 29386401 cctggcggcga------cggcgacaagaaggaccgcaagttcgagccccccgccgccccc 29386348 Query: 201 tcgcgcgtgggccgcaagcagcggaaacagaggggccccgaggcggcggcgcggctgccc 260 || ||||| |||||||||||||| || |||| ||||||||||||||| || || || ||| Sbjct: 29386347 tcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctcccc 29386288 Query: 261 cccgtggctccgctctccaagtgccgcctccgccttctcaagctggaccgcgtcaaggac 320 ||| || || ||||||||||||||||||||||| |||||||| || || ||||||||| Sbjct: 29386287 aacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaaggac 29386228 Query: 321 taccttctcatggaggaggagttcgtcgcgagccaggagcggctgcgccccagcgaagac 380 ||||| ||||||||||||||||||||||| ||||||||| || ||||||| ||| ||| Sbjct: 29386227 tacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgaggac 29386168 Query: 381 aagacggaggaggaccgatctaaggtcgacgacctccgcggcacccctatgagcgttggc 440 ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 29386167 aagaccgaggaggaccgatccaaggtcgacgacctccgcggcacccccatgagcgtcgga 29386108 Query: 441 tcgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgt 490 || |||||||||||||||||||||||||| || |||||||| || ||||| Sbjct: 29386107 tccctcgaggagatcatcgacgagagccatgccatcgtctcctcctccgt 29386058
>dbj|AK105861.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A02, full insert sequence Length = 1599 Score = 355 bits (179), Expect = 9e-95 Identities = 352/410 (85%), Gaps = 6/410 (1%) Strand = Plus / Plus Query: 81 atggggcagggttctccgggcggcatgggcaagcagggcggtctccccggtgaccgcaag 140 ||||||||||| | ||||| |||||||||||||||||||| |||||| ||||||||| Sbjct: 92 atggggcagggcaccccgggaggcatgggcaagcagggcggcgcccccggcgaccgcaag 151 Query: 141 ccaggcgacggtgccgccggcgacaagaaggacaagaagttcgagccgcccgccgccccg 200 || |||| || |||||||||||||||| ||||||||||| ||||||||||| Sbjct: 152 cctggcggcga------cggcgacaagaaggaccgcaagttcgagccccccgccgccccc 205 Query: 201 tcgcgcgtgggccgcaagcagcggaaacagaggggccccgaggcggcggcgcggctgccc 260 || ||||| |||||||||||||| || |||| ||||||||||||||| || || || ||| Sbjct: 206 tcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctcccc 265 Query: 261 cccgtggctccgctctccaagtgccgcctccgccttctcaagctggaccgcgtcaaggac 320 ||| || || ||||||||||||||||||||||| |||||||| || || ||||||||| Sbjct: 266 aacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaaggac 325 Query: 321 taccttctcatggaggaggagttcgtcgcgagccaggagcggctgcgccccagcgaagac 380 ||||| ||||||||||||||||||||||| ||||||||| || ||||||| ||| ||| Sbjct: 326 tacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgaggac 385 Query: 381 aagacggaggaggaccgatctaaggtcgacgacctccgcggcacccctatgagcgttggc 440 ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 386 aagaccgaggaggaccgatccaaggtcgacgacctccgcggcacccccatgagcgtcgga 445 Query: 441 tcgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgt 490 || |||||||||||||||||||||||||| || |||||||| || ||||| Sbjct: 446 tccctcgaggagatcatcgacgagagccatgccatcgtctcctcctccgt 495
>dbj|AK099264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C04, full insert sequence Length = 1597 Score = 355 bits (179), Expect = 9e-95 Identities = 352/410 (85%), Gaps = 6/410 (1%) Strand = Plus / Plus Query: 81 atggggcagggttctccgggcggcatgggcaagcagggcggtctccccggtgaccgcaag 140 ||||||||||| | ||||| |||||||||||||||||||| |||||| ||||||||| Sbjct: 93 atggggcagggcaccccgggaggcatgggcaagcagggcggcgcccccggcgaccgcaag 152 Query: 141 ccaggcgacggtgccgccggcgacaagaaggacaagaagttcgagccgcccgccgccccg 200 || |||| || |||||||||||||||| ||||||||||| ||||||||||| Sbjct: 153 cctggcggcga------cggcgacaagaaggaccgcaagttcgagccccccgccgccccc 206 Query: 201 tcgcgcgtgggccgcaagcagcggaaacagaggggccccgaggcggcggcgcggctgccc 260 || ||||| |||||||||||||| || |||| ||||||||||||||| || || || ||| Sbjct: 207 tcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctcccc 266 Query: 261 cccgtggctccgctctccaagtgccgcctccgccttctcaagctggaccgcgtcaaggac 320 ||| || || ||||||||||||||||||||||| |||||||| || || ||||||||| Sbjct: 267 aacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaaggac 326 Query: 321 taccttctcatggaggaggagttcgtcgcgagccaggagcggctgcgccccagcgaagac 380 ||||| ||||||||||||||||||||||| ||||||||| || ||||||| ||| ||| Sbjct: 327 tacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgaggac 386 Query: 381 aagacggaggaggaccgatctaaggtcgacgacctccgcggcacccctatgagcgttggc 440 ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 387 aagaccgaggaggaccgatccaaggtcgacgacctccgcggcacccccatgagcgtcgga 446 Query: 441 tcgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgt 490 || |||||||||||||||||||||||||| || |||||||| || ||||| Sbjct: 447 tccctcgaggagatcatcgacgagagccatgccatcgtctcctcctccgt 496
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 355 bits (179), Expect = 9e-95 Identities = 352/410 (85%), Gaps = 6/410 (1%) Strand = Plus / Minus Query: 81 atggggcagggttctccgggcggcatgggcaagcagggcggtctccccggtgaccgcaag 140 ||||||||||| | ||||| |||||||||||||||||||| |||||| ||||||||| Sbjct: 49383 atggggcagggcaccccgggaggcatgggcaagcagggcggcgcccccggcgaccgcaag 49324 Query: 141 ccaggcgacggtgccgccggcgacaagaaggacaagaagttcgagccgcccgccgccccg 200 || |||| || |||||||||||||||| ||||||||||| ||||||||||| Sbjct: 49323 cctggcggcga------cggcgacaagaaggaccgcaagttcgagccccccgccgccccc 49270 Query: 201 tcgcgcgtgggccgcaagcagcggaaacagaggggccccgaggcggcggcgcggctgccc 260 || ||||| |||||||||||||| || |||| ||||||||||||||| || || || ||| Sbjct: 49269 tcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctcccc 49210 Query: 261 cccgtggctccgctctccaagtgccgcctccgccttctcaagctggaccgcgtcaaggac 320 ||| || || ||||||||||||||||||||||| |||||||| || || ||||||||| Sbjct: 49209 aacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaaggac 49150 Query: 321 taccttctcatggaggaggagttcgtcgcgagccaggagcggctgcgccccagcgaagac 380 ||||| ||||||||||||||||||||||| ||||||||| || ||||||| ||| ||| Sbjct: 49149 tacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgaggac 49090 Query: 381 aagacggaggaggaccgatctaaggtcgacgacctccgcggcacccctatgagcgttggc 440 ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 49089 aagaccgaggaggaccgatccaaggtcgacgacctccgcggcacccccatgagcgtcgga 49030 Query: 441 tcgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgt 490 || |||||||||||||||||||||||||| || |||||||| || ||||| Sbjct: 49029 tccctcgaggagatcatcgacgagagccatgccatcgtctcctcctccgt 48980
>dbj|AK058311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H11, full insert sequence Length = 1615 Score = 355 bits (179), Expect = 9e-95 Identities = 352/410 (85%), Gaps = 6/410 (1%) Strand = Plus / Plus Query: 81 atggggcagggttctccgggcggcatgggcaagcagggcggtctccccggtgaccgcaag 140 ||||||||||| | ||||| |||||||||||||||||||| |||||| ||||||||| Sbjct: 92 atggggcagggcaccccgggaggcatgggcaagcagggcggcgcccccggcgaccgcaag 151 Query: 141 ccaggcgacggtgccgccggcgacaagaaggacaagaagttcgagccgcccgccgccccg 200 || |||| || |||||||||||||||| ||||||||||| ||||||||||| Sbjct: 152 cctggcggcga------cggcgacaagaaggaccgcaagttcgagccccccgccgccccc 205 Query: 201 tcgcgcgtgggccgcaagcagcggaaacagaggggccccgaggcggcggcgcggctgccc 260 || ||||| |||||||||||||| || |||| ||||||||||||||| || || || ||| Sbjct: 206 tcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctcccc 265 Query: 261 cccgtggctccgctctccaagtgccgcctccgccttctcaagctggaccgcgtcaaggac 320 ||| || || ||||||||||||||||||||||| |||||||| || || ||||||||| Sbjct: 266 aacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaaggac 325 Query: 321 taccttctcatggaggaggagttcgtcgcgagccaggagcggctgcgccccagcgaagac 380 ||||| ||||||||||||||||||||||| ||||||||| || ||||||| ||| ||| Sbjct: 326 tacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgaggac 385 Query: 381 aagacggaggaggaccgatctaaggtcgacgacctccgcggcacccctatgagcgttggc 440 ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 386 aagaccgaggaggaccgatccaaggtcgacgacctccgcggcacccccatgagcgtcgga 445 Query: 441 tcgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgt 490 || |||||||||||||||||||||||||| || |||||||| || ||||| Sbjct: 446 tccctcgaggagatcatcgacgagagccatgccatcgtctcctcctccgt 495
>dbj|D17789.1|RICHTBP2 Oryza sativa (japonica cultivar-group) mRNA for homologue of Tat binding protein, complete cds Length = 1609 Score = 355 bits (179), Expect = 9e-95 Identities = 352/410 (85%), Gaps = 6/410 (1%) Strand = Plus / Plus Query: 81 atggggcagggttctccgggcggcatgggcaagcagggcggtctccccggtgaccgcaag 140 ||||||||||| | ||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 60 atggggcagggcaccccgggaggcatgggcaagcagggcggtgcccccggcgaccgcaag 119 Query: 141 ccaggcgacggtgccgccggcgacaagaaggacaagaagttcgagccgcccgccgccccg 200 || |||| || |||||||||||||||| ||||||||||| |||||||||| Sbjct: 120 cctggcggcga------cggcgacaagaaggaccgcaagttcgagccctccgccgccccc 173 Query: 201 tcgcgcgtgggccgcaagcagcggaaacagaggggccccgaggcggcggcgcggctgccc 260 || ||||| |||||||||||||| || |||| ||||||||||||||| || || || ||| Sbjct: 174 tcccgcgtcggccgcaagcagcgcaagcagaagggccccgaggcggccgctcgcctcccc 233 Query: 261 cccgtggctccgctctccaagtgccgcctccgccttctcaagctggaccgcgtcaaggac 320 ||| || || ||||||||||||||||||||||| |||||||| || || ||||||||| Sbjct: 234 aacgtcgcccctctctccaagtgccgcctccgcctcctcaagctcgagcgggtcaaggac 293 Query: 321 taccttctcatggaggaggagttcgtcgcgagccaggagcggctgcgccccagcgaagac 380 ||||| ||||||||||||||||||||||| ||||||||| || ||||||| ||| ||| Sbjct: 294 tacctcctcatggaggaggagttcgtcgccgcccaggagcgcctccgccccaccgaggac 353 Query: 381 aagacggaggaggaccgatctaaggtcgacgacctccgcggcacccctatgagcgttggc 440 ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 354 aagaccgaggaggaccgatccaaggtcgacgacctccgcggcacccccatgagcgtcgga 413 Query: 441 tcgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgt 490 || |||||||||||||||||||||||||| || |||||||| || ||||| Sbjct: 414 tccctcgaggagatcatcgacgagagccatgccatcgtctcctcctccgt 463
>gb|AF432345.1| Tortula ruralis 26S proteasome regulatory subunit IV (RPT2) mRNA, complete cds Length = 1845 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 165 aagaaggacaagaagttcgagccgcccgccgccccgtcgcgcgtgggccgcaagcagcgg 224 |||||||| ||||||| ||||||| |||| | || |||||||||| ||||||||||| Sbjct: 259 aagaaggagaagaagtacgagccggccgcgccacccacgcgcgtggggcgcaagcagcgc 318 Query: 225 aaacagaggggccccgaggcggcggcgcggctgccc 260 || |||| |||| |||||||||| ||||| |||||| Sbjct: 319 aagcagaagggctccgaggcggccgcgcgcctgccc 354 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 291 cgccttctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttcgtc 347 ||||| || ||||||||||| | ||||||||| || |||||| |||||||||||||| Sbjct: 385 cgcctgctgaagctggaccgtgccaaggactatctgctcatgaaggaggagttcgtc 441
>gb|AY105631.1| Zea mays PCO101908 mRNA sequence Length = 1272 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 443 gctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtccgt 490 |||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct: 1 gctcgaggagatcatcgacgagagccacgccatcgtctcctcctccgt 48
>ref|NM_079745.2| Drosophila melanogaster Proteasome 26S subunit subunit 4 ATPase CG5289-RA (Pros26.4), mRNA Length = 1631 Score = 61.9 bits (31), Expect = 2e-06 Identities = 147/183 (80%), Gaps = 2/183 (1%) Strand = Plus / Plus Query: 297 ctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttcgtcgcgagccag 356 ||||||||||| ||| ||||||| ||||| | |||||||| |||||| || | |||| Sbjct: 383 ctcaagctggagcgcatcaaggattacctgatgatggaggacgagttcatccgcaaccag 442 Query: 357 gagcggctgc-gccccagcgaagacaagacggaggaggaccgatctaaggtcgacgacct 415 ||||| ||| ||||||| || || |||| |||||||| || |||||||| ||||| || Sbjct: 443 gagcgcctgaagccccag-gacgagaagaacgaggaggagcgctctaaggttgacgatct 501 Query: 416 ccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacgagagccacgcgat 475 ||||||||||| ||| ||| ||| || ||||||||||||||||| | |||||| || Sbjct: 502 gcgcggcacccccatgtccgtgggcaacctggaggagatcatcgacgacaaccacgccat 561 Query: 476 cgt 478 ||| Sbjct: 562 cgt 564
>gb|AC007929.8|AC007929 Drosophila melanogaster, chromosome 3R, region 95A-95C, BAC clone BACR05C11, complete sequence Length = 171376 Score = 61.9 bits (31), Expect = 2e-06 Identities = 147/183 (80%), Gaps = 2/183 (1%) Strand = Plus / Minus Query: 297 ctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttcgtcgcgagccag 356 ||||||||||| ||| ||||||| ||||| | |||||||| |||||| || | |||| Sbjct: 96516 ctcaagctggagcgcatcaaggattacctgatgatggaggacgagttcatccgcaaccag 96457 Query: 357 gagcggctgc-gccccagcgaagacaagacggaggaggaccgatctaaggtcgacgacct 415 ||||| ||| ||||||| || || |||| |||||||| || |||||||| ||||| || Sbjct: 96456 gagcgcctgaagccccag-gacgagaagaacgaggaggagcgctctaaggttgacgatct 96398 Query: 416 ccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacgagagccacgcgat 475 ||||||||||| ||| ||| ||| || ||||||||||||||||| | |||||| || Sbjct: 96397 gcgcggcacccccatgtccgtgggcaacctggaggagatcatcgacgacaaccacgccat 96338 Query: 476 cgt 478 ||| Sbjct: 96337 cgt 96335
>gb|AE003745.4| Drosophila melanogaster chromosome 3R, section 83 of 118 of the complete sequence Length = 230236 Score = 61.9 bits (31), Expect = 2e-06 Identities = 147/183 (80%), Gaps = 2/183 (1%) Strand = Plus / Minus Query: 297 ctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttcgtcgcgagccag 356 ||||||||||| ||| ||||||| ||||| | |||||||| |||||| || | |||| Sbjct: 129408 ctcaagctggagcgcatcaaggattacctgatgatggaggacgagttcatccgcaaccag 129349 Query: 357 gagcggctgc-gccccagcgaagacaagacggaggaggaccgatctaaggtcgacgacct 415 ||||| ||| ||||||| || || |||| |||||||| || |||||||| ||||| || Sbjct: 129348 gagcgcctgaagccccag-gacgagaagaacgaggaggagcgctctaaggttgacgatct 129290 Query: 416 ccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacgagagccacgcgat 475 ||||||||||| ||| ||| ||| || ||||||||||||||||| | |||||| || Sbjct: 129289 gcgcggcacccccatgtccgtgggcaacctggaggagatcatcgacgacaaccacgccat 129230 Query: 476 cgt 478 ||| Sbjct: 129229 cgt 129227
>gb|U39303.1|DMU39303 Drosophila melanogaster 26S proteasome subunit 4 ATPase mRNA, complete cds Length = 1497 Score = 61.9 bits (31), Expect = 2e-06 Identities = 147/183 (80%), Gaps = 2/183 (1%) Strand = Plus / Plus Query: 297 ctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttcgtcgcgagccag 356 ||||||||||| ||| ||||||| ||||| | |||||||| |||||| || | |||| Sbjct: 290 ctcaagctggagcgcatcaaggattacctgatgatggaggacgagttcatccgcaaccag 349 Query: 357 gagcggctgc-gccccagcgaagacaagacggaggaggaccgatctaaggtcgacgacct 415 ||||| ||| ||||||| || || |||| |||||||| || |||||||| ||||| || Sbjct: 350 gagcgcctgaagccccag-gacgagaagaacgaggaggagcgctctaaggttgacgatct 408 Query: 416 ccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacgagagccacgcgat 475 ||||||||||| ||| ||| ||| || ||||||||||||||||| | |||||| || Sbjct: 409 gcgcggcacccccatgtccgtgggcaacctggaggagatcatcgacgacaaccacgccat 468 Query: 476 cgt 478 ||| Sbjct: 469 cgt 471
>emb|BX060993.1|CNS09J85 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC41CD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1018 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 297 ctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttc 344 ||||||||||| ||| |||||||||| || || ||||||||||||||| Sbjct: 275 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 322
>emb|BX067931.1|CNS09OKV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC51DD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 935 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 297 ctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttc 344 ||||||||||| ||| |||||||||| || || ||||||||||||||| Sbjct: 207 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 254 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 442 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtc 487 |||| ||||||||||||||||| | |||||| ||||| ||| |||| Sbjct: 351 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtc 396
>emb|BX041812.1|CNS094FC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC13BH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 546 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 297 ctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttc 344 ||||||||||| ||| |||||||||| || || ||||||||||||||| Sbjct: 201 ctcaagctggagcgcctcaaggactatctgctgatggaggaggagttc 248 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 442 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtc 487 |||| ||||||||||||||||| | |||||| ||||| ||| |||| Sbjct: 345 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtc 390
>emb|BX038369.1|CNS091RP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB2DA06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 720 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 297 ctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttc 344 ||||||||||| ||| |||||||||| || || ||||||||||||||| Sbjct: 463 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 416 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Minus Query: 442 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtc 487 |||| ||||||||||||||||| | |||||| ||||| ||| |||| Sbjct: 318 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtc 273
>emb|BX017976.1|CNS08M18 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA27AF10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 949 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 297 ctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttc 344 ||||||||||| ||| |||||||||| || || ||||||||||||||| Sbjct: 203 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 250 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 442 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtc 487 |||| ||||||||||||||||| | |||||| ||||| ||| |||| Sbjct: 347 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtc 392
>emb|BX009769.1|CNS08FP9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA15DB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 882 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 297 ctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttc 344 ||||||||||| ||| |||||||||| || || ||||||||||||||| Sbjct: 271 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 318 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 442 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtc 487 |||| ||||||||||||||||| | |||||| ||||| ||| |||| Sbjct: 417 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtc 462
>ref|XM_312924.2| Anopheles gambiae str. PEST ENSANGP00000014726 (ENSANGG00000012237), partial mRNA Length = 1317 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 297 ctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttc 344 ||||||||||| ||| |||||||||| || || ||||||||||||||| Sbjct: 181 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 228 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 442 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtc 487 |||| ||||||||||||||||| | |||||| ||||| ||| |||| Sbjct: 326 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtc 371
>ref|XM_312923.2| Anopheles gambiae str. PEST ENSANGP00000014769 (ENSANGG00000012280), partial mRNA Length = 1317 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 297 ctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttc 344 ||||||||||| ||| |||||||||| || || ||||||||||||||| Sbjct: 181 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 228 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 442 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtc 487 |||| ||||||||||||||||| | |||||| ||||| ||| |||| Sbjct: 326 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtc 371
>ref|XM_312720.2| Anopheles gambiae str. PEST ENSANGP00000017106 (ENSANGG00000014617), partial mRNA Length = 1317 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 297 ctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttc 344 ||||||||||| ||| |||||||||| || || ||||||||||||||| Sbjct: 181 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 228 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 442 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtc 487 |||| ||||||||||||||||| | |||||| ||||| ||| |||| Sbjct: 326 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtc 371
>ref|XM_312719.2| Anopheles gambiae str. PEST ENSANGP00000017098 (ENSANGG00000014609), partial mRNA Length = 1317 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 297 ctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttc 344 ||||||||||| ||| |||||||||| || || ||||||||||||||| Sbjct: 181 ctcaagctggagcgcatcaaggactatctgctgatggaggaggagttc 228 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 442 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtc 487 |||| ||||||||||||||||| | |||||| ||||| ||| |||| Sbjct: 326 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtc 371
>gb|AY058759.1| Drosophila melanogaster SD02658 full length cDNA Length = 1493 Score = 54.0 bits (27), Expect = 5e-04 Identities = 146/183 (79%), Gaps = 2/183 (1%) Strand = Plus / Plus Query: 297 ctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttcgtcgcgagccag 356 ||||||||||| ||| ||||||| ||||| | |||||||| |||||| || | |||| Sbjct: 267 ctcaagctggagcgcatcaaggattacctgatgatggaggacgagttcatccgcaaccag 326 Query: 357 gagcggctgc-gccccagcgaagacaagacggaggaggaccgatctaaggtcgacgacct 415 ||||| ||| ||||||| || || |||| |||||||| || || ||||| ||||| || Sbjct: 327 gagcgcctgaagccccag-gacgagaagaacgaggaggagcgctccaaggttgacgatct 385 Query: 416 ccgcggcacccctatgagcgttggctcgctcgaggagatcatcgacgagagccacgcgat 475 ||||||||||| ||| ||| ||| || ||||||||||||||||| | |||||| || Sbjct: 386 gcgcggcacccccatgtccgtgggcaacctggaggagatcatcgacgacaaccacgccat 445 Query: 476 cgt 478 ||| Sbjct: 446 cgt 448
>emb|CR727756.2|CNS0GOHE Tetraodon nigroviridis full-length cDNA Length = 1397 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 315 aaggactaccttctcatggaggaggagttcgtcgcgagccaggagc 360 ||||||||||| || ||||||||||||||| || ||||||||||| Sbjct: 151 aaggactacctcctgatggaggaggagttcatcaggagccaggagc 196
>ref|XM_450245.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1959 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Plus Query: 81 atggggcagggttctccgggcggcatgggcaagcagggcggtctccccggtgaccgcaag 140 ||||||||||| |||| || ||||||||||||||||| || ||||||||| |||||| Sbjct: 1445 atggggcagggcactcccggaggcatgggcaagcagggtggcacccccggtgagcgcaag 1504
>ref|XM_948843.1| Theileria annulata strain Ankara 26S proteasome subunit 4 (TA05950) partial mRNA Length = 1317 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 447 gaggagatcatcgacgagagccacgcgatcgt 478 ||||||||||||||||||| |||||| ||||| Sbjct: 331 gaggagatcatcgacgagaaccacgccatcgt 362
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Minus Query: 81 atggggcagggttctccgggcggcatgggcaagcagggcggtctccccggtgaccgcaag 140 ||||||||||| |||| || ||||||||||||||||| || ||||||||| |||||| Sbjct: 3436782 atggggcagggcactcccggaggcatgggcaagcagggtggcacccccggtgagcgcaag 3436723
>dbj|AP005729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0069P02 Length = 163033 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Minus Query: 81 atggggcagggttctccgggcggcatgggcaagcagggcggtctccccggtgaccgcaag 140 ||||||||||| |||| || ||||||||||||||||| || ||||||||| |||||| Sbjct: 152714 atggggcagggcactcccggaggcatgggcaagcagggtggcacccccggtgagcgcaag 152655
>dbj|AP005550.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1058_F03 Length = 150486 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Minus Query: 81 atggggcagggttctccgggcggcatgggcaagcagggcggtctccccggtgaccgcaag 140 ||||||||||| |||| || ||||||||||||||||| || ||||||||| |||||| Sbjct: 105263 atggggcagggcactcccggaggcatgggcaagcagggtggcacccccggtgagcgcaag 105204
>dbj|AK109459.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-C04, full insert sequence Length = 1959 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Plus Query: 81 atggggcagggttctccgggcggcatgggcaagcagggcggtctccccggtgaccgcaag 140 ||||||||||| |||| || ||||||||||||||||| || ||||||||| |||||| Sbjct: 1445 atggggcagggcactcccggaggcatgggcaagcagggtggcacccccggtgagcgcaag 1504
>emb|AL935285.6| Zebrafish DNA sequence from clone DKEY-37A1, complete sequence Length = 230323 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 19 tctctctatctctccgctaacccaaaccctaaccct 54 ||||||| ||||||| ||||||| |||||||||||| Sbjct: 172111 tctctctctctctcccctaaccctaaccctaaccct 172076
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 46.1 bits (23), Expect = 0.11 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 179 gttcgagccgcccgccgccccgtcgcgcgtg 209 |||||||||||| |||||||||||||||||| Sbjct: 1193694 gttcgagccgcc-gccgccccgtcgcgcgtg 1193665
>ref|XM_599954.2| PREDICTED: Bos taurus similar to zinc finger CCCH-type domain containing 6 (LOC521686), mRNA Length = 3292 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 232 ggggccccgaggcggcggcgcgg 254 ||||||||||||||||||||||| Sbjct: 2963 ggggccccgaggcggcggcgcgg 2941
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 46.1 bits (23), Expect = 0.11 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 179 gttcgagccgcccgccgccccgtcgcgcgtg 209 |||||||||||| |||||||||||||||||| Sbjct: 2322405 gttcgagccgcc-gccgccccgtcgcgcgtg 2322434
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 46.1 bits (23), Expect = 0.11 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 179 gttcgagccgcccgccgccccgtcgcgcgtg 209 |||||||||||| |||||||||||||||||| Sbjct: 2062686 gttcgagccgcc-gccgccccgtcgcgcgtg 2062657
>emb|CR719511.2|CNS0GI4D Tetraodon nigroviridis full-length cDNA Length = 1483 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 315 aaggactaccttctcatggaggaggagttc 344 ||||||||||| || ||||||||||||||| Sbjct: 203 aaggactacctcctgatggaggaggagttc 232
>emb|CR711378.2|CNS0GBUM Tetraodon nigroviridis full-length cDNA Length = 765 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 315 aaggactaccttctcatggaggaggagttc 344 ||||||||||| || ||||||||||||||| Sbjct: 203 aaggactacctcctgatggaggaggagttc 232
>emb|CR713443.2|CNS0GDFZ Tetraodon nigroviridis full-length cDNA Length = 765 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 315 aaggactaccttctcatggaggaggagttc 344 ||||||||||| || ||||||||||||||| Sbjct: 203 aaggactacctcctgatggaggaggagttc 232
>emb|CR695652.2|CNS0FZPS Tetraodon nigroviridis full-length cDNA Length = 1333 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 315 aaggactaccttctcatggaggaggagttc 344 ||||||||||| || ||||||||||||||| Sbjct: 203 aaggactacctcctgatggaggaggagttc 232
>emb|CR689180.2|CNS0FUQ0 Tetraodon nigroviridis full-length cDNA Length = 1478 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 315 aaggactaccttctcatggaggaggagttc 344 ||||||||||| || ||||||||||||||| Sbjct: 203 aaggactacctcctgatggaggaggagttc 232
>emb|CR650415.2|CNS0F0TX Tetraodon nigroviridis full-length cDNA Length = 1469 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 315 aaggactaccttctcatggaggaggagttc 344 ||||||||||| || ||||||||||||||| Sbjct: 203 aaggactacctcctgatggaggaggagttc 232
>emb|CR649796.2|CNS0F0CQ Tetraodon nigroviridis full-length cDNA Length = 1461 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 315 aaggactaccttctcatggaggaggagttc 344 ||||||||||| || ||||||||||||||| Sbjct: 203 aaggactacctcctgatggaggaggagttc 232
>emb|CR646015.2|CNS0EXFP Tetraodon nigroviridis full-length cDNA Length = 1507 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 315 aaggactaccttctcatggaggaggagttc 344 ||||||||||| || ||||||||||||||| Sbjct: 240 aaggactacctcctgatggaggaggagttc 269
>emb|BX067932.1|CNS09OKW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC51DD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 883 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Minus Query: 442 cgctcgaggagatcatcgacgagagccacgcgatcgtctcgtcgtc 487 |||| ||||||||||||||||| | |||||| ||||| ||| |||| Sbjct: 712 cgctggaggagatcatcgacgataaccacgcaatcgtgtcgacgtc 667 Score = 40.1 bits (20), Expect = 6.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 297 ctcaagctggaccgcgtcaaggactaccttctcatggaggaggagttc 344 ||||||||||| ||| |||| |||| || || ||||||||||||||| Sbjct: 857 ctcaagctggagcgcatcaaagactttctgctgatggaggaggagttc 810
>emb|AJ291500.1|BNA291500 Brassica napus homologue of SPH gene, AT4g29040 gene and AT4g29100 gene, clone SI13 Length = 14775 Score = 44.1 bits (22), Expect = 0.44 Identities = 118/150 (78%) Strand = Plus / Plus Query: 216 aagcagcggaaacagaggggccccgaggcggcggcgcggctgccccccgtggctccgctc 275 ||||||||||| || | || |||||||||||||||||||| || | ||| |||| | Sbjct: 2335 aagcagcggaagcaaaaaggacccgaggcggcggcgcggctcccgacggtgactccttcc 2394 Query: 276 tccaagtgccgcctccgccttctcaagctggaccgcgtcaaggactaccttctcatggag 335 |||| ||| ||||| || ||||| |||| || |||||||||| || || |||||| Sbjct: 2395 accaaatgcaagctccggctgctcaaaatggagcggatcaaggactatctactgatggag 2454 Query: 336 gaggagttcgtcgcgagccaggagcggctg 365 || |||||||| |||| ||||||| ||||| Sbjct: 2455 gaagagttcgtggcgaaccaggagaggctg 2484
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 cgagccgcccgccgccccgtcgcgc 206 ||||||| ||||||||||||||||| Sbjct: 2412842 cgagccggccgccgccccgtcgcgc 2412818
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 ggccccgaggcggcggcgcgg 254 ||||||||||||||||||||| Sbjct: 312042 ggccccgaggcggcggcgcgg 312062
>gb|AC158617.9| Mus musculus 10 BAC RP23-283O2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 240410 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gctaacccaaaccctaaccct 54 ||||||||||||||||||||| Sbjct: 169201 gctaacccaaaccctaaccct 169221
>gb|AC093019.2| Homo sapiens chromosome 1 clone RP4-714D9, complete sequence Length = 116911 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 ggactaccttctcatggagga 337 ||||||||||||||||||||| Sbjct: 83772 ggactaccttctcatggagga 83752
>gb|AC156275.6| Mus musculus 10 BAC RP24-192F16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 160348 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gctaacccaaaccctaaccct 54 ||||||||||||||||||||| Sbjct: 19157 gctaacccaaaccctaaccct 19177
>ref|XM_231305.3| PREDICTED: Rattus norvegicus similar to mKIAA3002 protein (predicted) (LOC311987), mRNA Length = 2994 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 agccgcccgccgccccgtcgc 204 ||||||||||||||||||||| Sbjct: 221 agccgcccgccgccccgtcgc 241
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 cgcccgccgccccgtcgcgcg 207 ||||||||||||||||||||| Sbjct: 3315033 cgcccgccgccccgtcgcgcg 3315053
>ref|NM_127300.3| Arabidopsis thaliana RHA3A; protein binding / ubiquitin-protein ligase/ zinc ion binding AT2G17450 (RHA3A) mRNA, complete cds Length = 827 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcgacaagaaggacaagaag 179 |||||||||||||||||||| Sbjct: 535 gcgacaagaaggacaagaag 516
>ref|NM_184650.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2133 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gccgccggcgacaagaaggacaag 176 |||||||||| ||||||||||||| Sbjct: 34 gccgccggcggcaagaaggacaag 57
>ref|NM_192108.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1779 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gccggcggcgatggggcagg 90 |||||||||||||||||||| Sbjct: 103 gccggcggcgatggggcagg 122
>gb|AY431732.1| Aedes aegypti ASAP ID: 35123 ribosomal protein S6 mRNA sequence Length = 679 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 154 ccgccggcgacaagaaggacaagaagttcgag 185 ||||||| ||||||||||| |||||| ||||| Sbjct: 324 ccgccggagacaagaaggagaagaaggtcgag 355
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 146 cgacggtgccgccggcgacaagaaggac 173 ||||||||||||||||| | |||||||| Sbjct: 191880 cgacggtgccgccggcgccgagaaggac 191907
>gb|AY513014.1| Callithrix jacchus interstitial telomere sequence Length = 655 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 564 ctaacccaaaccctaaccct 545 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 528 ctaacccaaaccctaaccct 509
>gb|AY512991.1| Pongo pygmaeus interstitial telomere sequence Length = 521 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 324 ctaacccaaaccctaaccct 343
>gb|AY512988.1| Pan paniscus interstitial telomere sequence Length = 506 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 323 ctaacccaaaccctaaccct 342
>gb|AY513058.1| Pan troglodytes interstitial telomere sequence Length = 603 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 368 ctaacccaaaccctaaccct 349
>gb|AY513057.1| Pan paniscus interstitial telomere sequence Length = 602 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 363 ctaacccaaaccctaaccct 344
>ref|XM_864126.1| PREDICTED: Bos taurus similar to a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 20 isoform 1 (LOC613391), mRNA Length = 1164 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tcgagccgcccgccgccccg 200 |||||||||||||||||||| Sbjct: 546 tcgagccgcccgccgccccg 527
>ref|XM_361361.1| Magnaporthe grisea 70-15 predicted protein (MG03835.4) partial mRNA Length = 570 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 ggccccgaggcggcggcgcg 253 |||||||||||||||||||| Sbjct: 239 ggccccgaggcggcggcgcg 220
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gccggcggcgatggggcagg 90 |||||||||||||||||||| Sbjct: 57541 gccggcggcgatggggcagg 57560
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 agcaaccagccggcggcgat 82 |||||||||||||||||||| Sbjct: 113157 agcaaccagccggcggcgat 113138
>ref|XM_655697.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3185.2), mRNA Length = 1665 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 aagaaaagccgatctctcta 26 |||||||||||||||||||| Sbjct: 989 aagaaaagccgatctctcta 1008
>emb|AJ496188.1|SSC496188 Sus scrofa partial telomeric repeat, clone pF6 Length = 201 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 149 ctaacccaaaccctaaccct 130 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 95 ctaacccaaaccctaaccct 76
>emb|AL353738.16| Human DNA sequence from clone RP11-206H15 on chromosome 13, complete sequence Length = 124406 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 gactaccttctcatggagga 337 |||||||||||||||||||| Sbjct: 42864 gactaccttctcatggagga 42845
>gb|AC131730.2| Mus musculus BAC clone RP23-115A5 from chromosome 5, complete sequence Length = 218708 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 85344 ctaacccaaaccctaaccct 85363 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 85320 ctaacccaaaccctaaccct 85339 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 85206 ctaacccaaaccctaaccct 85225
>gb|AC122033.5| Mus musculus BAC clone RP24-403A7 from chromosome 17, complete sequence Length = 119877 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 102295 ctaacccaaaccctaaccct 102314
>gb|AC126254.3| Mus musculus BAC clone RP24-132D17 from chromosome 17, complete sequence Length = 167995 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 157704 ctaacccaaaccctaaccct 157685
>gb|AC125332.3| Mus musculus BAC clone RP23-113I20 from 3, complete sequence Length = 220068 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 86346 ctaacccaaaccctaaccct 86327
>gb|AC093686.6| Homo sapiens BAC clone RP11-713A20 from 7, complete sequence Length = 189854 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 3160 ctaacccaaaccctaaccct 3179
>gb|AC093666.4| Homo sapiens BAC clone RP11-482G13 from 7, complete sequence Length = 157816 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 3165 ctaacccaaaccctaaccct 3184
>gb|AC097646.2| Homo sapiens cosmid clone XXcos-2185C14 from 7, complete sequence Length = 42961 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 42301 ctaacccaaaccctaaccct 42320
>emb|AL954642.9| Human DNA sequence from clone RP11-885N19 on chromosome 9 Contains the 3' end of the CACNA1B gene for alpha 1B subunit of L type voltage-dependent calcium channel, a pseudogene similar to part of interleukin 9 receptor (ILR9), a tubulin, beta polypeptide 4, member Q (TUBB4Q) pseudogene and five CpG islands, complete sequence Length = 154372 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 128327 ctaacccaaaccctaaccct 128308 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 55371 ctaacccaaaccctaaccct 55352
>emb|AL591424.12| Human DNA sequence from clone RP11-424E7 on chromosome 9 Contains the 3' end of the CACNA1B gene for alpha 1B subunit of L type voltage-dependent calcium channel, a pseudogene similar to part of interleukin 9 receptor (ILR9), a tubulin, beta polypeptide 4, member Q (TUBB4Q) pseudogene and five CpG islands, complete sequence Length = 201853 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 32971 ctaacccaaaccctaaccct 32990
>emb|AL354824.8| Human DNA sequence from clone RP11-416N4 on chromosome 20 Contains two novel genes, part of a novel gene, the 5' end of the SNAP25 gene for 25 kD synaptosomal-associated protein and 3 CpG islands, complete sequence Length = 83951 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 49042 ctaacccaaaccctaaccct 49023
>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8 Length = 207674 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 gccgcctccgccttctcaagctgg 306 ||||||||| |||||||||||||| Sbjct: 136396 gccgcctcctccttctcaagctgg 136419
>gb|AY062961.1| Arabidopsis thaliana putative RING zinc finger protein (At2g17450) mRNA, complete cds Length = 589 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcgacaagaaggacaagaag 179 |||||||||||||||||||| Sbjct: 432 gcgacaagaaggacaagaag 413
>gb|AF370239.1| Arabidopsis thaliana putative RING zinc finger protein (At2g17450) mRNA, complete cds Length = 776 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcgacaagaaggacaagaag 179 |||||||||||||||||||| Sbjct: 476 gcgacaagaaggacaagaag 457
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 taaccctcgaatcgaagcaa 67 |||||||||||||||||||| Sbjct: 609119 taaccctcgaatcgaagcaa 609138
>gb|AC164432.3| Mus musculus BAC clone RP23-394G23 from chromosome 8, complete sequence Length = 220224 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 11730 ctaacccaaaccctaaccct 11711 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 11670 ctaacccaaaccctaaccct 11651 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 11634 ctaacccaaaccctaaccct 11615
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 ccgaggcggcggcgcggctg 257 |||||||||||||||||||| Sbjct: 88416 ccgaggcggcggcgcggctg 88435
>emb|AL662843.11| Mouse DNA sequence from clone RP23-411E22 on chromosome 11 Contains the 3' end of the Col23a1 gene for procollagen (type XXIII, alpha 1), the 5' end of a novel gene and a CpG island, complete sequence Length = 155917 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 13842 ctaacccaaaccctaaccct 13861
>emb|AL607008.2|OSJN00119 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026E15, complete sequence Length = 137874 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 ggcggcggcgcggctgccccccgtggct 269 |||||||||||||| ||| ||||||||| Sbjct: 104079 ggcggcggcgcggcggccacccgtggct 104106
>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46 Length = 198788 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 gccgcctccgccttctcaagctgg 306 ||||||||| |||||||||||||| Sbjct: 125761 gccgcctcctccttctcaagctgg 125784
>emb|CR938641.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAA1YD03BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 228 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 154 ccgccggcgacaagaaggacaagaagttcgag 185 ||||||| ||||||||||| |||||| ||||| Sbjct: 171 ccgccggagacaagaaggagaagaaggtcgag 140
>emb|CR938363.1| Single read from an extremity of a full-length cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAA2YB17BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 805 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 154 ccgccggcgacaagaaggacaagaagttcgag 185 ||||||| ||||||||||| |||||| ||||| Sbjct: 261 ccgccggagacaagaaggagaagaaggtcgag 230
>gb|AC010552.6| Homo sapiens chromosome 16 clone RP11-568F1, complete sequence Length = 202889 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 1992 ctaacccaaaccctaaccct 2011
>gb|AC016588.9| Homo sapiens chromosome 19 clone CTD-3113P16, complete sequence Length = 144578 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 13518 ctaacccaaaccctaaccct 13537
>gb|AC151604.2| Emiliania huxleyi clone JGIACCU-13A1, complete sequence Length = 36530 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 31521 ctaacccaaaccctaaccct 31502
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 ccgaggcggcggcgcggctgcccc 261 |||||| ||||||||||||||||| Sbjct: 2068988 ccgaggaggcggcgcggctgcccc 2068965
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccgaggcggcggcgcggctg 257 |||||||||||||||||||| Sbjct: 3092529 ccgaggcggcggcgcggctg 3092510 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 ccgaggcggcggcgcggctg 257 |||||||||||||||||||| Sbjct: 2453362 ccgaggcggcggcgcggctg 2453381
>ref|NM_143700.3| Drosophila melanogaster CG17724-RA, transcript variant A (CG17724), mRNA Length = 3873 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 tcgaggagatcatcgacgag 464 |||||||||||||||||||| Sbjct: 2020 tcgaggagatcatcgacgag 2039
>gb|AC012048.11| Homo sapiens chromosome 10 clone RP11-43N22, complete sequence Length = 178965 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 35504 ctaacccaaaccctaaccct 35485
>gb|AC007584.4| Arabidopsis thaliana chromosome 2 clone MJB20 map mi398, complete sequence Length = 84592 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gcgacaagaaggacaagaag 179 |||||||||||||||||||| Sbjct: 1614 gcgacaagaaggacaagaag 1633
>gb|AC093180.12| Oryza sativa chromosome 3 BAC OJ1004_D04 genomic sequence, complete sequence Length = 158170 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gccgccggcgacaagaaggacaag 176 |||||||||| ||||||||||||| Sbjct: 136441 gccgccggcggcaagaaggacaag 136464
>gb|AE009877.1|AE009877 Pyrobaculum aerophilum strain IM2 section 132 of 201 of the complete genome Length = 10470 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccgaggcggcggcgcggctg 257 |||||||||||||||||||| Sbjct: 8428 ccgaggcggcggcgcggctg 8409
>gb|AY070882.1| Drosophila melanogaster LD16673 full length cDNA Length = 3009 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 tcgaggagatcatcgacgag 464 |||||||||||||||||||| Sbjct: 1140 tcgaggagatcatcgacgag 1159
>gb|AC026696.5| Homo sapiens chromosome 5 clone CTC-348L14, complete sequence Length = 125862 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 59380 ctaacccaaaccctaaccct 59399
>gb|AC099026.1| Drosophila melanogaster, chromosome 2R, region 49F-50A, BAC clone BACR05M17, complete sequence Length = 182039 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 tcgaggagatcatcgacgag 464 |||||||||||||||||||| Sbjct: 175866 tcgaggagatcatcgacgag 175885
>gb|AY060442.1| Drosophila melanogaster LD47433 full length cDNA Length = 3433 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 tcgaggagatcatcgacgag 464 |||||||||||||||||||| Sbjct: 2020 tcgaggagatcatcgacgag 2039
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cgcccgccgccccgtcgcgc 206 |||||||||||||||||||| Sbjct: 645953 cgcccgccgccccgtcgcgc 645934
>gb|AF154067.1|AF154067 Aedes aegypti ribosomal protein S6 mRNA, complete cds Length = 1041 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 154 ccgccggcgacaagaaggacaagaagttcgag 185 ||||||| ||||||||||| |||||| ||||| Sbjct: 899 ccgccggagacaagaaggagaagaaggtcgag 930
>gb|AF154066.1|AF154066 Aedes albopictus ribosomal protein S6 (rpS6) mRNA, complete cds Length = 1050 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 154 ccgccggcgacaagaaggacaagaagttcgag 185 ||||||| ||||||||||| |||||| ||||| Sbjct: 908 ccgccggagacaagaaggagaagaaggtcgag 939
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 cgccggcgacaagaaggaca 174 |||||||||||||||||||| Sbjct: 697746 cgccggcgacaagaaggaca 697765
>gb|DQ015674.1| Zea mays RFLP core bin marker probe p-npi393/G23A-06 (CBM6.03), complete sequence Length = 1249 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ggcggcgcggctgccccccg 264 |||||||||||||||||||| Sbjct: 206 ggcggcgcggctgccccccg 225
>gb|AF220137.1|AF220137 Homo sapiens tripartite motif protein TRIM33 beta mRNA, complete cds; alternatively spliced Length = 3458 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gccgcccgccgccccgtcgc 204 |||||||||||||||||||| Sbjct: 51 gccgcccgccgccccgtcgc 32
>gb|AF220136.1|AF220136 Homo sapiens tripartite motif protein TRIM33 alpha (TRIM33) mRNA, complete cds; alternatively spliced Length = 3509 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gccgcccgccgccccgtcgc 204 |||||||||||||||||||| Sbjct: 51 gccgcccgccgccccgtcgc 32
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 tcgaggagatcatcgacgag 464 |||||||||||||||||||| Sbjct: 1753756 tcgaggagatcatcgacgag 1753775
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 ggcggcggcgcggctgccccccgtggct 269 |||||||||||||| ||| ||||||||| Sbjct: 6549831 ggcggcggcgcggcggccacccgtggct 6549858
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 ggcggcggcgcggctgcccc 261 |||||||||||||||||||| Sbjct: 10142406 ggcggcggcgcggctgcccc 10142425
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gccggcggcgatggggcagg 90 |||||||||||||||||||| Sbjct: 27827124 gccggcggcgatggggcagg 27827143 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 agcaaccagccggcggcgat 82 |||||||||||||||||||| Sbjct: 26262109 agcaaccagccggcggcgat 26262090
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 gccggcggcgatggggcagg 90 |||||||||||||||||||| Sbjct: 28372842 gccggcggcgatggggcagg 28372823
>gb|AC006247.12|AC006247 Drosophila melanogaster, chromosome 2R, region 49E6-49F8, BAC clone BACR48I10, complete sequence Length = 163162 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 tcgaggagatcatcgacgag 464 |||||||||||||||||||| Sbjct: 24120 tcgaggagatcatcgacgag 24139
>gb|AC069287.7| Homo sapiens BAC clone RP11-304M2 from 11, complete sequence Length = 199487 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 84160 ctaacccaaaccctaaccct 84141 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 84052 ctaacccaaaccctaaccct 84033 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 83851 ctaacccaaaccctaaccct 83832
>gb|AC133919.3| Homo sapiens chromosome 16 clone RP11-356C4, complete sequence Length = 210446 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 146374 ctaacccaaaccctaaccct 146355
>emb|BX822040.1|CNS0A954 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL93ZH09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 723 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcgacaagaaggacaagaag 179 |||||||||||||||||||| Sbjct: 459 gcgacaagaaggacaagaag 440
>emb|BX821155.1|CNS0A973 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL1ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 819 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcgacaagaaggacaagaag 179 |||||||||||||||||||| Sbjct: 535 gcgacaagaaggacaagaag 516
>gb|AC160949.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0006E22, complete sequence Length = 128256 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 ggcatgggcaagcagggcgg 121 |||||||||||||||||||| Sbjct: 91668 ggcatgggcaagcagggcgg 91687
>emb|BX934897.1| Gallus gallus finished cDNA, clone ChEST149o4 Length = 1947 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 cgaggcggcggcgcggctgc 258 |||||||||||||||||||| Sbjct: 7 cgaggcggcggcgcggctgc 26
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 acaagaaggacaagaagttcgagc 186 ||||||| |||||||||||||||| Sbjct: 7878218 acaagaacgacaagaagttcgagc 7878195
>ref|XM_573799.1| PREDICTED: Rattus norvegicus similar to hypothetical protein FLJ25477 isoform 2 (LOC498529), mRNA Length = 1984 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 ccgaggcggcggcgcggctg 257 |||||||||||||||||||| Sbjct: 120 ccgaggcggcggcgcggctg 139
>gb|AC131281.7| Homo sapiens chromosome 8, clone RP11-585F1, complete sequence Length = 120139 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 11660 ctaacccaaaccctaaccct 11641
>gb|AC110274.5| Homo sapiens chromosome 8, clone RP11-161B15, complete sequence Length = 152802 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 78900 ctaacccaaaccctaaccct 78881
>emb|AL954845.21| Zebrafish DNA sequence from clone DKEY-30H3, complete sequence Length = 226343 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 gctaacccaaaccctaaccc 53 |||||||||||||||||||| Sbjct: 134565 gctaacccaaaccctaaccc 134546
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0519D04 Length = 193068 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 gccggcggcgatggggcagg 90 |||||||||||||||||||| Sbjct: 87942 gccggcggcgatggggcagg 87923
>dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0491D10 Length = 162039 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 ggcggcggcgcggctgcccc 261 |||||||||||||||||||| Sbjct: 108772 ggcggcggcgcggctgcccc 108791
>dbj|AK102700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103K23, full insert sequence Length = 2477 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gccgccggcgacaagaaggacaag 176 |||||||||| ||||||||||||| Sbjct: 106 gccgccggcggcaagaaggacaag 129
>gb|AC004908.1|AC004908 Homo sapiens PAC clone RP5-855D21, complete sequence Length = 138251 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 82019 ctaacccaaaccctaaccct 82038
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 cgaggcggcggcgcggctgc 258 |||||||||||||||||||| Sbjct: 515290 cgaggcggcggcgcggctgc 515271
>dbj|AK062931.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-A07, full insert sequence Length = 594 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gcgacaagaaggacaagaag 179 |||||||||||||||||||| Sbjct: 304 gcgacaagaaggacaagaag 323
>emb|AL731859.12| Zebrafish DNA sequence from clone BUSM1-12G7 in linkage group 9, complete sequence Length = 135052 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 11429 ctaacccaaaccctaaccct 11448
>emb|AL731656.5| Zebrafish DNA sequence from clone BUSM1-256P4 in linkage group 9, complete sequence Length = 68167 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 4543 ctaacccaaaccctaaccct 4562
>gb|AE003819.3| Drosophila melanogaster chromosome 2R, section 31 of 73 of the complete sequence Length = 221945 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 tcgaggagatcatcgacgag 464 |||||||||||||||||||| Sbjct: 98327 tcgaggagatcatcgacgag 98308
>gb|AF119043.1|AF119043 Homo sapiens transcriptional intermediary factor 1 gamma mRNA, complete cds Length = 3510 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gccgcccgccgccccgtcgc 204 |||||||||||||||||||| Sbjct: 51 gccgcccgccgccccgtcgc 32
>emb|AL078621.19|HSA395L14 Human DNA sequence from clone RP11-395L14. Contains (part of) up to six novel genes or pseudogenes, the gene for a novel forkhead protein similar to FOXD4 (forkhead box D4, FREAC5), the gene for a novel phosphoglucomutase like protein, a pseudogene similar to part of DEAD/H (Asp-Glu-Ala-Asp/His) box (S.cerevisiae CHL1-like helicase), an RPL23A (60S ribosomal protein L23A) pseudogene, the RABL2A gene for RAB-like 2A, the gene for a novel protein similar to small nuclear ribonucleoprotein polypeptide A' (SNRPA1) and the 3' part of the gene for a novel protein similar to acrosin (ACR). Contains ESTs, STSs, GSSs and nine putative CpG islands, complete sequence Length = 176734 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 108667 ctaacccaaaccctaaccct 108686
>gb|AC005471.1|AC005471 Drosophila melanogaster, chromosome 2R, region 49F11-49F13, P1 clone DS01087, complete sequence Length = 50714 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 tcgaggagatcatcgacgag 464 |||||||||||||||||||| Sbjct: 37329 tcgaggagatcatcgacgag 37310
>gb|AF078824.1|AF078824 Arabidopsis thaliana RING-H2 finger protein RHA3a mRNA, complete cds Length = 826 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcgacaagaaggacaagaag 179 |||||||||||||||||||| Sbjct: 528 gcgacaagaaggacaagaag 509
>gb|AF037218.1| Human herpesvirus 7 strain RK, complete genome Length = 153080 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 152687 ctaacccaaaccctaaccct 152706 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 147053 ctaacccaaaccctaaccct 147072 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 146981 ctaacccaaaccctaaccct 147000 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 9641 ctaacccaaaccctaaccct 9660 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 4007 ctaacccaaaccctaaccct 4026 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 3935 ctaacccaaaccctaaccct 3954
>gb|AC134525.5| Mus musculus BAC clone RP24-496F7 from 8, complete sequence Length = 215900 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 115818 ctaacccaaaccctaaccct 115799 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 115758 ctaacccaaaccctaaccct 115739 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 115722 ctaacccaaaccctaaccct 115703
>gb|AC127589.4| Mus musculus BAC clone RP23-134K6 from 5, complete sequence Length = 209121 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 88128 ctaacccaaaccctaaccct 88109
>emb|AJ240726.1|GGA240726 Gallus gallus HD7/G10 telomere junction Length = 163 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 84 ctaacccaaaccctaaccct 65 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 31 ctaacccaaaccctaaccct 12
>emb|AJ240720.1|GGA240720 Gallus gallus HD6/B3 telomere junction Length = 100 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 21 ctaacccaaaccctaaccct 2
>emb|AJ240718.1|GGA240718 Gallus gallus HD2/D12 telomere junction Length = 160 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 52 ctaacccaaaccctaaccct 33
>emb|AJ240716.1|GGA240716 Gallus gallus EDF2 telomere junction Length = 101 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 81 ctaacccaaaccctaaccct 62
>emb|AJ240698.1|GGA240698 Gallus gallus DNA for LEI0351 SSCP marker Length = 962 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 419 ctaacccaaaccctaaccct 400
>gb|M73018.1|HUMCHR2A Human ancestral telomeric fusion DNA sequence Length = 1873 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 966 ctaacccaaaccctaaccct 985
>emb|AL136103.24| Human DNA sequence from clone RP1-250B11 on chromosome 10 Contains STSs and GSSs, complete sequence Length = 98348 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 65556 ctaacccaaaccctaaccct 65537
>emb|X71725.1|MNSAT1 M.novaeangliae (clone Mno-1) heavy satellite repetitive DNA Length = 422 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 324 ctaacccaaaccctaaccct 305
>emb|X71718.1|EGSAT4 E.glacialis (clone Egl-4) heavy satellite repetitive DNA Length = 973 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 947 ctaacccaaaccctaaccct 928
>emb|X71717.1|EGSAT3 E.glacialis (clone Egl-3) heavy satellite repetitive DNA Length = 841 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 779 ctaacccaaaccctaaccct 760
>emb|X71715.1|EGSAT1 E.glacialis (clone Egl-1) heavy satellite repetitive DNA Length = 889 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 827 ctaacccaaaccctaaccct 808
>emb|X71705.1|BMSATS2 B.mysticeti (clone Bmy-S2) heavy satellite repetitive DNA Length = 553 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 491 ctaacccaaaccctaaccct 472
>emb|X71704.1|BMSATS1 B.mysticeti (clone Bmy-S1) heavy satellite repetitive DNA Length = 715 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 653 ctaacccaaaccctaaccct 634
>emb|X71703.1|BMSATM4 B.mysticetus (clone Bmy-M4) heavy satellite repetitive DNA Length = 906 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 844 ctaacccaaaccctaaccct 825
>emb|X71701.1|BMSATM2 B.mysticetus (clone Bmy-M2) heavy satellite repetitive DNA Length = 898 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 836 ctaacccaaaccctaaccct 817
>emb|X71700.1|BMSATM1 B.mysticetus (clone Bmy-M1) heavy satellite repetitive DNA Length = 972 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 910 ctaacccaaaccctaaccct 891
>emb|X71699.1|BMSATL2 B.mysticetus (clone Bmy-L2) heavy satellite repetitive DNA Length = 1188 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacccaaaccctaaccct 54 |||||||||||||||||||| Sbjct: 1126 ctaacccaaaccctaaccct 1107 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,502,675 Number of Sequences: 3902068 Number of extensions: 3502675 Number of successful extensions: 116467 Number of sequences better than 10.0: 169 Number of HSP's better than 10.0 without gapping: 171 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112319 Number of HSP's gapped (non-prelim): 4143 length of query: 506 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 484 effective length of database: 17,147,199,772 effective search space: 8299244689648 effective search space used: 8299244689648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
