ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast71b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DQ201195.1| Oryza sativa (japonica cultivar-group) calcineuri... 218 1e-53
2gb|AY104107.1| Zea mays PCO062189 mRNA sequence 192 7e-46
3ref|NM_197779.1| Oryza sativa (japonica cultivar-group) putative... 139 9e-30
4gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 geno... 86 1e-13
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 86 1e-13
7emb|AJ489272.1|CSA489272 Crocus sativus partial mRNA for calcine... 82 2e-12
8gb|AY818172.1| Ornithogalum virens clone 5OvR1 putative calcineu... 80 7e-12
9gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
10gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
11dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
12gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
13gb|BC047916.1| Homo sapiens signal peptide, CUB domain, EGF-like... 50 0.006
14gb|AY263772.1| Seepiophila jonesi clone E2-2A microsatellite seq... 50 0.006
15gb|DQ201200.1| Oryza sativa (japonica cultivar-group) calcineuri... 50 0.006
16gb|BT014682.1| Oryza sativa AK111505 mRNA sequence 50 0.006
17gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 50 0.006
18gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare str... 50 0.006
19dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
20dbj|AK111505.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
21gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, com... 50 0.006
22gb|AC091106.17| Mus musculus chromosome 6, clone RP23-103L13, co... 50 0.006
23gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare str... 50 0.006
24gb|BT018557.1| Zea mays clone EL01N0439H03.d mRNA sequence 48 0.025
25gb|AY110621.1| Zea mays CL4371_1 mRNA sequence 48 0.025
26ref|XM_463248.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.10
27gb|DQ201197.1| Oryza sativa (japonica cultivar-group) calcineuri... 46 0.10
28emb|AJ564446.1|OAR564446 Ovis aries partial ACACA gene for acety... 46 0.10
29dbj|AK112092.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
30dbj|AK111916.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
31emb|CR391974.8| Zebrafish DNA sequence from clone CH211-59E10 in... 46 0.10
32gb|AC091246.8| Oryza sativa (japonica cultivar-group) chromosome... 44 0.40
33emb|AL390840.17| Human DNA sequence from clone RP13-213K19 on ch... 44 0.40
34gb|AC092390.3| Oryza sativa chromosome 3 BAC OSJNBb0013K08 genom... 44 0.40
35emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right termin... 44 0.40
36emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left termina... 44 0.40
37ref|XM_510246.1| PREDICTED: Pan troglodytes LOC453256 (LOC453256... 42 1.6
38gb|CP000081.1| Leishmania major chromosome 35, complete sequence 42 1.6
39gb|BC003489.1| Mus musculus acidic nuclear phosphoprotein 32 fam... 42 1.6
40ref|NM_130889.1| Mus musculus acidic nuclear phosphoprotein 32 f... 42 1.6
41gb|AY083837.2| Geobacillus stearothermophilus strain ATCC 7954 a... 42 1.6
42ref|XM_838500.1| Leishmania major strain Friedlin RAD51/dmc1 pro... 42 1.6
43gb|AC129021.4| Mus musculus BAC clone RP23-312H15 from 16, compl... 42 1.6
44ref|NM_131911.2| Rattus norvegicus acidic nuclear phosphoprotein... 42 1.6
45gb|AC087900.19| Mus musculus strain C57BL/6J clone rp23-171i6 ma... 42 1.6
46gb|BC005628.1| Mus musculus acidic nuclear phosphoprotein 32 fam... 42 1.6
47gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 42 1.6
48dbj|AK165807.1| Mus musculus adult male jejunal and colic lymph ... 42 1.6
49gb|AF062380.1|AF062380 Leishmania major strain Friedlin Dmc1 hom... 42 1.6
50dbj|AK011134.1| Mus musculus 10 days embryo whole body cDNA, RIK... 42 1.6
51gb|BC093506.1| Mus musculus acidic nuclear phosphoprotein 32 fam... 42 1.6
52gb|BC086508.1| Rattus norvegicus acidic nuclear phosphoprotein 3... 42 1.6
53emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on ch... 42 1.6
54gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete... 42 1.6
55gb|DQ222512.1| Solanum tuberosum clone 117C05 unknown mRNA 40 6.2
56gb|DQ222487.1| Solanum tuberosum clone 097G01 unknown mRNA 40 6.2
57ref|XM_472540.1| Oryza sativa (japonica cultivar-group), predic... 40 6.2
58ref|NM_183217.1| Mus musculus cDNA sequence BC042698 (BC042698),... 40 6.2
59ref|XM_415085.1| PREDICTED: Gallus gallus similar to Golgi autoa... 40 6.2
60gb|BC042698.1| Mus musculus cDNA sequence BC042698, mRNA (cDNA c... 40 6.2
61gb|AC132293.3| Mus musculus BAC clone RP24-322H1 from chromosome... 40 6.2
62gb|BT013191.1| Lycopersicon esculentum clone 134301R, mRNA sequence 40 6.2
63emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.2
64ref|XM_762680.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 6.2
65ref|XM_762681.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 6.2
66gb|AC117623.7| Mus musculus chromosome 1, clone RP23-114L12, com... 40 6.2
67gb|AC091503.2| Rattus norvegicus strain Brown Norway clone RP31-... 40 6.2
68gb|AC087262.2| Rattus norvegicus strain Brown Norway clone RP31-... 40 6.2
69emb|BX640422.1| Bordetella pertussis strain Tohama I, complete g... 40 6.2
70emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
71emb|CR753867.11| Zebrafish DNA sequence from clone DKEY-165I4 in... 40 6.2
72emb|CR735112.10| Zebrafish DNA sequence from clone CH211-222C11 ... 40 6.2
73emb|AL732483.8| Mouse DNA sequence from clone RP23-70K10 on chro... 40 6.2
74gb|AC154190.2| Mus musculus BAC clone RP24-465P16 from chromosom... 40 6.2
75dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
76gb|BC039908.1| Mus musculus, clone IMAGE:2582171, mRNA 40 6.2
77ref|XM_573462.1| PREDICTED: Rattus norvegicus similar to CDNA se... 40 6.2
78gb|AC114542.9| Mus musculus chromosome 9, clone RP23-111F9, comp... 40 6.2
79emb|CT030723.18| Mouse DNA sequence from clone RP23-33L24 on chr... 40 6.2
80emb|CT030235.12| Mouse DNA sequence from clone RP23-240F19 on ch... 40 6.2
81gb|AC154415.3| Mus musculus BAC clone RP24-232A21 from chromosom... 40 6.2
82emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
83emb|CT025653.7| Mouse DNA sequence from clone RP23-62D21 on chro... 40 6.2

>gb|DQ201195.1| Oryza sativa (japonica cultivar-group) calcineurin B-like protein 1
           (CBL1) mRNA, complete cds
          Length = 642

 Score =  218 bits (110), Expect = 1e-53
 Identities = 184/209 (88%)
 Strand = Plus / Plus

                                                                       
Query: 250 ctcgcctcccagaccgccttcagcgtcagcgaagtcgaggcgttgtttgagctgttcaag 309
           ||||||||| |||||||||| ||||| || || || ||||| ||||| ||||||||||||
Sbjct: 61  ctcgcctccgagaccgcctttagcgtaagtgaggtggaggctttgttcgagctgttcaag 120

                                                                       
Query: 310 agcattagtggatcagtgatcgatgatggtttgatcaataaggaagagttccagcttgca 369
           ||||||||||| || |||||||| |||||  | |||||||||||||||||||  ||||||
Sbjct: 121 agcattagtggttctgtgatcgacgatgggctcatcaataaggaagagttccgacttgca 180

                                                                       
Query: 370 ttgttcanaaacacaaggagggaaaatcttttcgctaatcggatattcgaccttttcgat 429
           ||||| | ||||| ||||| ||||||||||||||||||||||||||| |||||||| |||
Sbjct: 181 ttgtttaaaaacaaaaggaaggaaaatcttttcgctaatcggatatttgacctttttgat 240

                                        
Query: 430 gtcaagaaaaggggcgtcatcgattttgg 458
           || ||||||||||| |||||||| |||||
Sbjct: 241 gtgaagaaaaggggggtcatcgactttgg 269



to top

>gb|AY104107.1| Zea mays PCO062189 mRNA sequence
          Length = 1394

 Score =  192 bits (97), Expect = 7e-46
 Identities = 198/232 (85%)
 Strand = Plus / Plus

                                                                       
Query: 227 ctggctacgaggaccccgtacaactcgcctcccagaccgccttcagcgtcagcgaagtcg 286
           ||||||||||||||||||| || |||||||||||||||||||||||||| || || || |
Sbjct: 448 ctggctacgaggaccccgtgcacctcgcctcccagaccgccttcagcgttagtgaggttg 507

                                                                       
Query: 287 aggcgttgtttgagctgttcaagagcattagtggatcagtgatcgatgatggtttgatca 346
           ||||  | || ||||||||||||||||| ||||| || ||||| ||||||||  ||||||
Sbjct: 508 aggctctattcgagctgttcaagagcataagtggttcggtgattgatgatggcctgatca 567

                                                                       
Query: 347 ataaggaagagttccagcttgcattgttcanaaacacaaggagggaaaatcttttcgcta 406
           | |||||||| |||||||| ||| | || |  ||    ||||  |||||||||||||| |
Sbjct: 568 acaaggaagaattccagctagcactatttaagaatcagaggaaagaaaatcttttcgcca 627

                                                               
Query: 407 atcggatattcgaccttttcgatgtcaagaaaaggggcgtcatcgattttgg 458
           |||||||||| |||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 628 atcggatatttgaccttttcgatgtcaagaaaaggggtgtcattgattttgg 679



to top

>ref|NM_197779.1| Oryza sativa (japonica cultivar-group) putative calcineurin
           (OSJNBa0027P10.7), mRNA
          Length = 653

 Score =  139 bits (70), Expect = 9e-30
 Identities = 99/109 (90%)
 Strand = Plus / Plus

                                                                       
Query: 350 aggaagagttccagcttgcattgttcanaaacacaaggagggaaaatcttttcgctaatc 409
           ||||||||||||| ||||||||||| | ||||| ||||| ||||||||||||||||||||
Sbjct: 5   aggaagagttccaacttgcattgtttaaaaacaaaaggaaggaaaatcttttcgctaatc 64

                                                            
Query: 410 ggatattcgaccttttcgatgtcaagaaaaggggcgtcatcgattttgg 458
           ||||||| |||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 65  ggatatttgacctttttgatgtgaagaaaaggggggtcatcgactttgg 113



to top

>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete
              sequence
          Length = 141307

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                          
Query: 350    aggaagagttccagcttgcattgttcanaaacacaaggagggaaaatcttttcgctaatc 409
              ||||||||||||| ||||||||||| | ||||| ||||| ||||||||||||||||||||
Sbjct: 101568 aggaagagttccaacttgcattgtttaaaaacaaaaggaaggaaaatcttttcgctaatc 101627

                
Query: 410    gg 411
              ||
Sbjct: 101628 gg 101629



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                         
Query: 286   gaggcgttgtttgagctgttcaagagcattagtggatcagtgatcgatgatggtttgatc 345
             ||||| ||||| ||||||||||||||||||||||| || |||||||| |||||  | |||
Sbjct: 94480 gaggctttgttcgagctgttcaagagcattagtggttctgtgatcgacgatgggctcatc 94539

                    
Query: 346   aataagg 352
             |||||||
Sbjct: 94540 aataagg 94546



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                              
Query: 411    gatattcgaccttttcgatgtcaagaaaaggggcgtcatcgattttgg 458
              |||||| |||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 101743 gatatttgacctttttgatgtgaagaaaaggggggtcatcgactttgg 101790



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                            
Query: 350      aggaagagttccagcttgcattgttcanaaacacaaggagggaaaatcttttcgctaatc 409
                ||||||||||||| ||||||||||| | ||||| ||||| ||||||||||||||||||||
Sbjct: 21786885 aggaagagttccaacttgcattgtttaaaaacaaaaggaaggaaaatcttttcgctaatc 21786944

                  
Query: 410      gg 411
                ||
Sbjct: 21786945 gg 21786946



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                            
Query: 286      gaggcgttgtttgagctgttcaagagcattagtggatcagtgatcgatgatggtttgatc 345
                ||||| ||||| ||||||||||||||||||||||| || |||||||| |||||  | |||
Sbjct: 21779797 gaggctttgttcgagctgttcaagagcattagtggttctgtgatcgacgatgggctcatc 21779856

                       
Query: 346      aataagg 352
                |||||||
Sbjct: 21779857 aataagg 21779863



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 411      gatattcgaccttttcgatgtcaagaaaaggggcgtcatcgattttgg 458
                |||||| |||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 21787060 gatatttgacctttttgatgtgaagaaaaggggggtcatcgactttgg 21787107



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                            
Query: 350      aggaagagttccagcttgcattgttcanaaacacaaggagggaaaatcttttcgctaatc 409
                ||||||||||||| ||||||||||| | ||||| ||||| ||||||||||||||||||||
Sbjct: 21798548 aggaagagttccaacttgcattgtttaaaaacaaaaggaaggaaaatcttttcgctaatc 21798607

                  
Query: 410      gg 411
                ||
Sbjct: 21798608 gg 21798609



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                            
Query: 286      gaggcgttgtttgagctgttcaagagcattagtggatcagtgatcgatgatggtttgatc 345
                ||||| ||||| ||||||||||||||||||||||| || |||||||| |||||  | |||
Sbjct: 21791460 gaggctttgttcgagctgttcaagagcattagtggttctgtgatcgacgatgggctcatc 21791519

                       
Query: 346      aataagg 352
                |||||||
Sbjct: 21791520 aataagg 21791526



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 411      gatattcgaccttttcgatgtcaagaaaaggggcgtcatcgattttgg 458
                |||||| |||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 21798723 gatatttgacctttttgatgtgaagaaaaggggggtcatcgactttgg 21798770



to top

>emb|AJ489272.1|CSA489272 Crocus sativus partial mRNA for calcineurin B protein
          Length = 214

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 86/101 (85%)
 Strand = Plus / Plus

                                                                       
Query: 268 ttcagcgtcagcgaagtcgaggcgttgtttgagctgttcaagagcattagtggatcagtg 327
           ||||||||||| ||||| ||||| ||||||||||| | ||||||||| ||| | || |||
Sbjct: 100 ttcagcgtcagtgaagttgaggcattgtttgagctatacaagagcataagtagttctgtg 159

                                                    
Query: 328 atcgatgatggtttgatcaataaggaagagttccagcttgc 368
           || |||||||| ||||| || |||||||| || ||||||||
Sbjct: 160 attgatgatggattgataaacaaggaagaatttcagcttgc 200



to top

>gb|AY818172.1| Ornithogalum virens clone 5OvR1 putative calcineurin B-like protein
           mRNA, partial cds
          Length = 742

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 159/199 (79%)
 Strand = Plus / Plus

                                                                       
Query: 260 agaccgccttcagcgtcagcgaagtcgaggcgttgtttgagctgttcaagagcattagtg 319
           ||||||| ||||| || |||||||| || || || || ||||| || |||||||| ||  
Sbjct: 276 agaccgctttcagtgttagcgaagttgaagcattattcgagctttttaagagcatcagca 335

                                                                       
Query: 320 gatcagtgatcgatgatggtttgatcaataaggaagagttccagcttgcattgttcanaa 379
           | || ||||| |||||||| ||||| ||||||||||| || |||||||| || ||||  |
Sbjct: 336 gttccgtgatagatgatgggttgataaataaggaagaatttcagcttgccttattcaaga 395

                                                                       
Query: 380 acacaaggagggaaaatcttttcgctaatcggatattcgaccttttcgatgtcaagaaaa 439
           |||  | |||||||||||||||||| ||  |||| || ||||| || ||||| ||  |||
Sbjct: 396 acaagaagagggaaaatcttttcgcaaacaggatctttgacctctttgatgtaaaacaaa 455

                              
Query: 440 ggggcgtcatcgattttgg 458
           | || ||||| ||||||||
Sbjct: 456 gaggagtcattgattttgg 474



to top

>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0063D09 map S1559, complete sequence
          Length = 190721

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                         
Query: 286   gaggcgttgtttgagctgttcaagagcattagtggatcagtgatcgatgatggtttgatc 345
             ||||| ||||| ||||||||||||||||||| ||| || |||||||| |||||  | |||
Sbjct: 24591 gaggctttgttcgagctgttcaagagcattaatggttctgtgatcgacgatgggcttatc 24650

                    
Query: 346   aataagg 352
             |||||||
Sbjct: 24651 aataagg 24657



to top

>gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055G24
              map S20116S, complete sequence
          Length = 174210

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                          
Query: 286    gaggcgttgtttgagctgttcaagagcattagtggatcagtgatcgatgatggtttgatc 345
              ||||| ||||| ||||||||||||||||||| ||| || |||||||| |||||  | |||
Sbjct: 174056 gaggctttgttcgagctgttcaagagcattaatggttctgtgatcgacgatgggcttatc 174115

                     
Query: 346    aataagg 352
              |||||||
Sbjct: 174116 aataagg 174122



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                           
Query: 286     gaggcgttgtttgagctgttcaagagcattagtggatcagtgatcgatgatggtttgatc 345
               ||||| ||||| ||||||||||||||||||| ||| || |||||||| |||||  | |||
Sbjct: 3656919 gaggctttgttcgagctgttcaagagcattaatggttctgtgatcgacgatgggcttatc 3656978

                      
Query: 346     aataagg 352
               |||||||
Sbjct: 3656979 aataagg 3656985



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                           
Query: 286     gaggcgttgtttgagctgttcaagagcattagtggatcagtgatcgatgatggtttgatc 345
               ||||| ||||| ||||||||||||||||||| ||| || |||||||| |||||  | |||
Sbjct: 3665613 gaggctttgttcgagctgttcaagagcattaatggttctgtgatcgacgatgggcttatc 3665672

                      
Query: 346     aataagg 352
               |||||||
Sbjct: 3665673 aataagg 3665679



to top

>gb|BC047916.1| Homo sapiens signal peptide, CUB domain, EGF-like 1, mRNA (cDNA
          clone IMAGE:6189117), complete cds
          Length = 2293

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 10 ccgcacgcccgcacgcccgcacgcc 34
          |||||||||||||||||||||||||
Sbjct: 22 ccgcacgcccgcacgcccgcacgcc 46



to top

>gb|AY263772.1| Seepiophila jonesi clone E2-2A microsatellite sequence
          Length = 208

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 10  ccgcacgcccgcacgcccgcacgcc 34
           |||||||||||||||||||||||||
Sbjct: 104 ccgcacgcccgcacgcccgcacgcc 128



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 10  ccgcacgcccgcacgcccgcacgcc 34
           |||||||||||||||||||||||||
Sbjct: 96  ccgcacgcccgcacgcccgcacgcc 120



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  ccgcacgcccgcacgcccgca 30
           |||||||||||||||||||||
Sbjct: 112 ccgcacgcccgcacgcccgca 132



to top

>gb|DQ201200.1| Oryza sativa (japonica cultivar-group) calcineurin B-like protein 6
           (CBL6) mRNA, complete cds
          Length = 681

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 286 gaggcgttgtttgagctgttcaagagcattagtggatcagtgatcgatgatggtttgatc 345
           |||||| ||| ||||||||||||||  |||||  |  | ||| | |||||||| ||||||
Sbjct: 142 gaggcgctgtatgagctgttcaagaagattagcagtgctgtggttgatgatggcttgatc 201

                            
Query: 346 aataaggaagagttcca 362
           ||||||||||| |||||
Sbjct: 202 aataaggaagaattcca 218



to top

>gb|BT014682.1| Oryza sativa AK111505 mRNA sequence
          Length = 678

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 286 gaggcgttgtttgagctgttcaagagcattagtggatcagtgatcgatgatggtttgatc 345
           |||||| ||| ||||||||||||||  |||||  |  | ||| | |||||||| ||||||
Sbjct: 139 gaggcgctgtatgagctgttcaagaagattagcagtgctgtggttgatgatggcttgatc 198

                            
Query: 346 aataaggaagagttcca 362
           ||||||||||| |||||
Sbjct: 199 aataaggaagaattcca 215



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 10       ccgcacgcccgcacgcccgcacgcc 34
                |||||||||||||||||||||||||
Sbjct: 10962913 ccgcacgcccgcacgcccgcacgcc 10962937



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 277      agcgaagtcgaggcgttgtttgagctgttcaaga 310
                ||||| || |||||||||| ||||||||||||||
Sbjct: 23696910 agcgaggttgaggcgttgtatgagctgttcaaga 23696943



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 14       acgcccgcacgcccgcacgcc 34
                |||||||||||||||||||||
Sbjct: 10962909 acgcccgcacgcccgcacgcc 10962929



to top

>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05,
             from chromosome 3, complete sequence
          Length = 127348

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 10    ccgcacgcccgcacgcccgcacgcc 34
             |||||||||||||||||||||||||
Sbjct: 18116 ccgcacgcccgcacgcccgcacgcc 18092



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 14    acgcccgcacgcccgcacgcc 34
             |||||||||||||||||||||
Sbjct: 18120 acgcccgcacgcccgcacgcc 18100



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 10       ccgcacgcccgcacgcccgcacgcc 34
                |||||||||||||||||||||||||
Sbjct: 10961014 ccgcacgcccgcacgcccgcacgcc 10961038



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 277      agcgaagtcgaggcgttgtttgagctgttcaaga 310
                ||||| || |||||||||| ||||||||||||||
Sbjct: 23689938 agcgaggttgaggcgttgtatgagctgttcaaga 23689971



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 14       acgcccgcacgcccgcacgcc 34
                |||||||||||||||||||||
Sbjct: 10961010 acgcccgcacgcccgcacgcc 10961030



to top

>dbj|AK111505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C11, full
           insert sequence
          Length = 1075

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 286 gaggcgttgtttgagctgttcaagagcattagtggatcagtgatcgatgatggtttgatc 345
           |||||| ||| ||||||||||||||  |||||  |  | ||| | |||||||| ||||||
Sbjct: 278 gaggcgctgtatgagctgttcaagaagattagcagtgctgtggttgatgatggcttgatc 337

                            
Query: 346 aataaggaagagttcca 362
           ||||||||||| |||||
Sbjct: 338 aataaggaagaattcca 354



to top

>gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, complete sequence
          Length = 201379

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 10     ccgcacgcccgcacgcccgcacgcc 34
              |||||||||||||||||||||||||
Sbjct: 137601 ccgcacgcccgcacgcccgcacgcc 137625



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 10     ccgcacgcccgcacgcccgcacgcc 34
              |||||||||||||||||||||||||
Sbjct: 137593 ccgcacgcccgcacgcccgcacgcc 137617



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     ccgcacgcccgcacgcccgc 29
              ||||||||||||||||||||
Sbjct: 137609 ccgcacgcccgcacgcccgc 137628



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     cgcccgcacgcccgcacgcc 34
              ||||||||||||||||||||
Sbjct: 137590 cgcccgcacgcccgcacgcc 137609



to top

>gb|AC091106.17| Mus musculus chromosome 6, clone RP23-103L13, complete sequence
          Length = 192344

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 10    ccgcacgcccgcacgcccgcacgcc 34
             |||||||||||||||||||||||||
Sbjct: 13216 ccgcacgcccgcacgcccgcacgcc 13240



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 10    ccgcacgcccgcacgcccgcacgcc 34
             |||||||||||||||||||||||||
Sbjct: 13208 ccgcacgcccgcacgcccgcacgcc 13232



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    ccgcacgcccgcacgcccgc 29
             ||||||||||||||||||||
Sbjct: 13224 ccgcacgcccgcacgcccgc 13243



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    cgcccgcacgcccgcacgcc 34
             ||||||||||||||||||||
Sbjct: 13205 cgcccgcacgcccgcacgcc 13224



to top

>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBa0042B10, from chromosome 3, complete sequence
          Length = 144205

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 10   ccgcacgcccgcacgcccgcacgcc 34
            |||||||||||||||||||||||||
Sbjct: 7736 ccgcacgcccgcacgcccgcacgcc 7760



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 14   acgcccgcacgcccgcacgcc 34
            |||||||||||||||||||||
Sbjct: 7732 acgcccgcacgcccgcacgcc 7752



to top

>gb|BT018557.1| Zea mays clone EL01N0439H03.d mRNA sequence
          Length = 1331

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 271 agcgtcagcgaagtcgaggcgttgtttgagctgttcaaga 310
           ||||| ||||| |||||||| |||| ||||||||||||||
Sbjct: 895 agcgtgagcgaggtcgaggcattgtatgagctgttcaaga 856



to top

>gb|AY110621.1| Zea mays CL4371_1 mRNA sequence
          Length = 943

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 271 agcgtcagcgaagtcgaggcgttgtttgagctgttcaaga 310
           ||||| ||||| |||||||| |||| ||||||||||||||
Sbjct: 24  agcgtgagcgaggtcgaggcattgtatgagctgttcaaga 63



to top

>ref|XM_463248.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1329

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 260 agaccgccttcagcgtcagcgaagtcgaggcgttgtttgagctgttcaaga 310
           |||||| ||| || || ||||| || |||||||||| ||||||||||||||
Sbjct: 454 agaccgtctttagtgtgagcgaggttgaggcgttgtatgagctgttcaaga 504



to top

>gb|DQ201197.1| Oryza sativa (japonica cultivar-group) calcineurin B-like protein 3
           (CBL3) mRNA, complete cds
          Length = 678

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 260 agaccgccttcagcgtcagcgaagtcgaggcgttgtttgagctgttcaaga 310
           |||||| ||| || || ||||| || |||||||||| ||||||||||||||
Sbjct: 113 agaccgtctttagtgtgagcgaggttgaggcgttgtatgagctgttcaaga 163



to top

>emb|AJ564446.1|OAR564446 Ovis aries partial ACACA gene for acetyl-CoA carboxylase-alpha,
           exon 1A
          Length = 1022

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 8   cgccgcacgcccgcacgcccgcacgcc 34
           |||||||||||||||||||||| ||||
Sbjct: 140 cgccgcacgcccgcacgcccgcccgcc 166



to top

>dbj|AK112092.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B01, full
           insert sequence
          Length = 1492

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 260 agaccgccttcagcgtcagcgaagtcgaggcgttgtttgagctgttcaaga 310
           |||||| ||| || || ||||| || |||||||||| ||||||||||||||
Sbjct: 472 agaccgtctttagtgtgagcgaggttgaggcgttgtatgagctgttcaaga 522



to top

>dbj|AK111916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133I20, full
           insert sequence
          Length = 1393

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 260 agaccgccttcagcgtcagcgaagtcgaggcgttgtttgagctgttcaaga 310
           |||||| ||| || || ||||| || |||||||||| ||||||||||||||
Sbjct: 391 agaccgtctttagtgtgagcgaggttgaggcgttgtatgagctgttcaaga 441



to top

>emb|CR391974.8| Zebrafish DNA sequence from clone CH211-59E10 in linkage group 19,
              complete sequence
          Length = 179116

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 11     cgcacgcccgcacgcccgcacgc 33
              |||||||||||||||||||||||
Sbjct: 146431 cgcacgcccgcacgcccgcacgc 146453



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 10     ccgcacgcccgcacgcccgcacgc 33
              |||||||||||||||| |||||||
Sbjct: 146438 ccgcacgcccgcacgcacgcacgc 146461



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 11     cgcacgcccgcacgcccgcacgcc 34
              ||||||| ||||||||||||||||
Sbjct: 146423 cgcacgcacgcacgcccgcacgcc 146446



to top

>gb|AC091246.8| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0002I03
              map E1419S, complete sequence
          Length = 150945

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 277    agcgaagtcgaggcgttgtttgagctgttcaaga 310
              ||||| || |||||||||| ||||||||||||||
Sbjct: 144993 agcgaggttgaggcgttgtatgagctgttcaaga 145026



to top

>emb|AL390840.17| Human DNA sequence from clone RP13-213K19 on chromosome X Contains a
             tubulin beta polypeptide pseudogene, complete sequence
          Length = 197611

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 331   gatgatggtttgatcaataagg 352
             ||||||||||||||||||||||
Sbjct: 27464 gatgatggtttgatcaataagg 27485



to top

>gb|AC092390.3| Oryza sativa chromosome 3 BAC OSJNBb0013K08 genomic sequence, complete
             sequence
          Length = 120116

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 277   agcgaagtcgaggcgttgtttgagctgttcaaga 310
             ||||| || |||||||||| ||||||||||||||
Sbjct: 28964 agcgaggttgaggcgttgtatgagctgttcaaga 28997



to top

>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat
          Length = 243019

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 10     ccgcacgcccgcacgcccgcacgcct 35
              |||||||||||||||||||| |||||
Sbjct: 186950 ccgcacgcccgcacgcccgcccgcct 186975



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 9      gccgcacgcccgcacgcccgcacgcc 34
              ||||||| ||||||||||||||||||
Sbjct: 186941 gccgcacacccgcacgcccgcacgcc 186966



to top

>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat
          Length = 273746

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 10     ccgcacgcccgcacgcccgcacgcct 35
              |||||||||||||||||||| |||||
Sbjct: 186950 ccgcacgcccgcacgcccgcccgcct 186975



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 9      gccgcacgcccgcacgcccgcacgcc 34
              ||||||| ||||||||||||||||||
Sbjct: 186941 gccgcacacccgcacgcccgcacgcc 186966



to top

>ref|XM_510246.1| PREDICTED: Pan troglodytes LOC453256 (LOC453256), mRNA
          Length = 1065

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 7   ccgccgcacgcccgcacgcccgcac 31
           ||||||||||| |||||||||||||
Sbjct: 382 ccgccgcacgcacgcacgcccgcac 406



to top

>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 158     cttctccggccgcggcgagct 178
               |||||||||||||||||||||
Sbjct: 1905067 cttctccggccgcggcgagct 1905087



to top

>gb|BC003489.1| Mus musculus acidic nuclear phosphoprotein 32 family, member B,
          mRNA (cDNA clone MGC:6313 IMAGE:2811622), complete cds
          Length = 1397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 10 ccgcacgcccgcacgcccgcacgcc 34
          |||| ||||||||||||||||||||
Sbjct: 42 ccgctcgcccgcacgcccgcacgcc 66



to top

>ref|NM_130889.1| Mus musculus acidic nuclear phosphoprotein 32 family, member B
          (Anp32b), mRNA
          Length = 1408

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 10 ccgcacgcccgcacgcccgcacgcc 34
          |||| ||||||||||||||||||||
Sbjct: 50 ccgctcgcccgcacgcccgcacgcc 74



to top

>gb|AY083837.2| Geobacillus stearothermophilus strain ATCC 7954 acetohydroxy acid
            synthase large subunit (ilvB), acetohydroxy acid synthase
            small subunit (ilvN), ketol-acid reductoisomerase (ilvC),
            and 2-isopropylmalate synthase (leuA) genes, complete
            cds; and isopropylmalate dehydratase (leuC) gene, partial
            cds
          Length = 5403

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 281  aagtcgaggcgttgtttgagctgtt 305
            |||||||||||||| ||||||||||
Sbjct: 2205 aagtcgaggcgttgattgagctgtt 2229



to top

>ref|XM_838500.1| Leishmania major strain Friedlin RAD51/dmc1 protein (LMJ_1419)
           partial mRNA
          Length = 1095

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 158 cttctccggccgcggcgagct 178
           |||||||||||||||||||||
Sbjct: 768 cttctccggccgcggcgagct 788



to top

>gb|AC129021.4| Mus musculus BAC clone RP23-312H15 from 16, complete sequence
          Length = 184961

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 11    cgcacgcccgcacgcccgcac 31
             |||||||||||||||||||||
Sbjct: 17617 cgcacgcccgcacgcccgcac 17597



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 11    cgcacgcccgcacgcccgcacgcc 34
             ||||||| ||||||||||||||||
Sbjct: 17625 cgcacgcacgcacgcccgcacgcc 17602



to top

>ref|NM_131911.2| Rattus norvegicus acidic nuclear phosphoprotein 32 family, member
          B (Anp32b), mRNA
          Length = 1392

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 10 ccgcacgcccgcacgcccgcacgcc 34
          |||| ||||||||||||||||||||
Sbjct: 23 ccgctcgcccgcacgcccgcacgcc 47



to top

>gb|AC087900.19| Mus musculus strain C57BL/6J clone rp23-171i6 map 19, complete sequence
          Length = 195066

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 11     cgcacgcccgcacgcccgcac 31
              |||||||||||||||||||||
Sbjct: 119677 cgcacgcccgcacgcccgcac 119657



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 11     cgcacgcccgcacgcccgcacgcc 34
              ||||||| ||||||||||||||||
Sbjct: 119685 cgcacgcacgcacgcccgcacgcc 119662



to top

>gb|BC005628.1| Mus musculus acidic nuclear phosphoprotein 32 family, member B,
          mRNA (cDNA clone MGC:11590 IMAGE:3963541), complete cds
          Length = 1408

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 10 ccgcacgcccgcacgcccgcacgcc 34
          |||| ||||||||||||||||||||
Sbjct: 50 ccgctcgcccgcacgcccgcacgcc 74



to top

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 109   gggtggaggcggcggtgatgc 129
             |||||||||||||||||||||
Sbjct: 38763 gggtggaggcggcggtgatgc 38783



to top

>dbj|AK165807.1| Mus musculus adult male jejunal and colic lymph node cDNA, RIKEN
           full-length enriched library, clone:G630089G23
           product:acidic nuclear phosphoprotein 32 family, member
           B, full insert sequence
          Length = 1436

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 10  ccgcacgcccgcacgcccgcacgcc 34
           |||| ||||||||||||||||||||
Sbjct: 94  ccgctcgcccgcacgcccgcacgcc 118



to top

>gb|AF062380.1|AF062380 Leishmania major strain Friedlin Dmc1 homolog (DMC1) gene, complete
           cds
          Length = 1095

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 158 cttctccggccgcggcgagct 178
           |||||||||||||||||||||
Sbjct: 768 cttctccggccgcggcgagct 788



to top

>dbj|AK011134.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2600001G16 product:similar to
           PROLIFERATION RELATED ACIDIC LEUCINE RICH PROTEIN PAL31 
           [Mus musculus], full insert sequence
          Length = 926

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 10  ccgcacgcccgcacgcccgcacgcc 34
           |||| ||||||||||||||||||||
Sbjct: 156 ccgctcgcccgcacgcccgcacgcc 180



to top

>gb|BC093506.1| Mus musculus acidic nuclear phosphoprotein 32 family, member B,
          mRNA (cDNA clone MGC:103080 IMAGE:4917194), complete
          cds
          Length = 1297

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 10 ccgcacgcccgcacgcccgcacgcc 34
          |||| ||||||||||||||||||||
Sbjct: 14 ccgctcgcccgcacgcccgcacgcc 38



to top

>gb|BC086508.1| Rattus norvegicus acidic nuclear phosphoprotein 32 family, member
          B, mRNA (cDNA clone MGC:91514 IMAGE:7103152), complete
          cds
          Length = 1392

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 10 ccgcacgcccgcacgcccgcacgcc 34
          |||| ||||||||||||||||||||
Sbjct: 23 ccgctcgcccgcacgcccgcacgcc 47



to top

>emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on chromosome 4, complete
             sequence
          Length = 227816

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 10    ccgcacgcccgcacgcccgcacgcc 34
             |||| ||||||||||||||||||||
Sbjct: 62334 ccgctcgcccgcacgcccgcacgcc 62358



to top

>gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete sequence
          Length = 53591

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 15    cgcccgcacgcccgcacgcct 35
             |||||||||||||||||||||
Sbjct: 19843 cgcccgcacgcccgcacgcct 19823



to top

>gb|DQ222512.1| Solanum tuberosum clone 117C05 unknown mRNA
          Length = 1067

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 292 ttgtttgagctgttcaagag 311
           ||||||||||||||||||||
Sbjct: 350 ttgtttgagctgttcaagag 369



to top

>gb|DQ222487.1| Solanum tuberosum clone 097G01 unknown mRNA
          Length = 1040

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 292 ttgtttgagctgttcaagag 311
           ||||||||||||||||||||
Sbjct: 329 ttgtttgagctgttcaagag 348



to top

>ref|XM_472540.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1473

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 21  cacgcccgcacgcctcccct 40
           ||||||||||||||||||||
Sbjct: 296 cacgcccgcacgcctcccct 315



to top

>ref|NM_183217.1| Mus musculus cDNA sequence BC042698 (BC042698), mRNA
          Length = 1520

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 15 cgcccgcacgcccgcacgcc 34
          ||||||||||||||||||||
Sbjct: 49 cgcccgcacgcccgcacgcc 30



to top

>ref|XM_415085.1| PREDICTED: Gallus gallus similar to Golgi autoantigen, golgin
            subfamily a, 3; male enhanced antigen-2; SY2/SY10
            protein; Golgi complex-associated protein of 170 kD;
            Golgi peripheral membrane protein; golgin-165; Golgi
            membrane associated protein; golgin-160 ... (LOC416791),
            mRNA
          Length = 5973

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  gctcttctccggccgcggcg 174
            ||||||||||||||||||||
Sbjct: 5832 gctcttctccggccgcggcg 5851



to top

>gb|BC042698.1| Mus musculus cDNA sequence BC042698, mRNA (cDNA clone MGC:51484
          IMAGE:4014625), complete cds
          Length = 1520

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 15 cgcccgcacgcccgcacgcc 34
          ||||||||||||||||||||
Sbjct: 49 cgcccgcacgcccgcacgcc 30



to top

>gb|AC132293.3| Mus musculus BAC clone RP24-322H1 from chromosome 1, complete sequence
          Length = 158294

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    cgcccgcacgcccgcacgcc 34
             ||||||||||||||||||||
Sbjct: 58816 cgcccgcacgcccgcacgcc 58835



to top

>gb|BT013191.1| Lycopersicon esculentum clone 134301R, mRNA sequence
          Length = 1082

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 292 ttgtttgagctgttcaagag 311
           ||||||||||||||||||||
Sbjct: 349 ttgtttgagctgttcaagag 368



to top

>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10,
            complete sequence
          Length = 144811

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   cacgcccgcacgcctcccct 40
            ||||||||||||||||||||
Sbjct: 8935 cacgcccgcacgcctcccct 8954



to top

>ref|XM_762680.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_448_24520_23597) partial mRNA
          Length = 924

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 60  gatccgctgcctcacctgctggcg 83
           |||||||||||||||| |||||||
Sbjct: 642 gatccgctgcctcacccgctggcg 665



to top

>ref|XM_762681.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_448_23633_24328) partial mRNA
          Length = 696

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 60  gatccgctgcctcacctgctggcg 83
           |||||||||||||||| |||||||
Sbjct: 247 gatccgctgcctcacccgctggcg 224



to top

>gb|AC117623.7| Mus musculus chromosome 1, clone RP23-114L12, complete sequence
          Length = 211821

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     cgcccgcacgcccgcacgcc 34
              ||||||||||||||||||||
Sbjct: 150983 cgcccgcacgcccgcacgcc 151002



to top

>gb|AC091503.2| Rattus norvegicus strain Brown Norway clone RP31-446A15, complete
             sequence
          Length = 178963

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 11    cgcacgcccgcacgcccgcacgcctccc 38
             ||||||| ||||||| ||||||||||||
Sbjct: 15857 cgcacgcacgcacgcacgcacgcctccc 15884



to top

>gb|AC087262.2| Rattus norvegicus strain Brown Norway clone RP31-151E23, complete
              sequence
          Length = 132809

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 11     cgcacgcccgcacgcccgcacgcctccc 38
              ||||||| ||||||| ||||||||||||
Sbjct: 101585 cgcacgcacgcacgcacgcacgcctccc 101612



to top

>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12
          Length = 257701

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 34    ctcccctgaccgccggaatccgcc 57
             ||||||||||||||| ||||||||
Sbjct: 92802 ctcccctgaccgccgaaatccgcc 92779



to top

>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 11    cgcacgcccgcacgcccgcacgcc 34
             ||||||| ||||||||||||||||
Sbjct: 23161 cgcacgcacgcacgcccgcacgcc 23184



to top

>emb|CR753867.11| Zebrafish DNA sequence from clone DKEY-165I4 in linkage group 5,
             complete sequence
          Length = 125222

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    gcctcacctgctggcgctgc 87
             ||||||||||||||||||||
Sbjct: 42361 gcctcacctgctggcgctgc 42342



to top

>emb|CR735112.10| Zebrafish DNA sequence from clone CH211-222C11 in linkage group 5,
             complete sequence
          Length = 156543

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    gcctcacctgctggcgctgc 87
             ||||||||||||||||||||
Sbjct: 63502 gcctcacctgctggcgctgc 63483



to top

>emb|AL732483.8| Mouse DNA sequence from clone RP23-70K10 on chromosome 2, complete
              sequence
          Length = 201542

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 10     ccgcacgcccgcacgcccgcacgc 33
              |||||||||||||||| |||||||
Sbjct: 174950 ccgcacgcccgcacgcacgcacgc 174973



to top

>gb|AC154190.2| Mus musculus BAC clone RP24-465P16 from chromosome 16, complete
             sequence
          Length = 150894

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 434   agaaaaggggcgtcatcgattttg 457
             |||||||| |||||||||||||||
Sbjct: 19688 agaaaaggagcgtcatcgattttg 19711



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 11       cgcacgcccgcacgcccgcacgcc 34
                ||||||| ||||||||||||||||
Sbjct: 23580480 cgcacgcacgcacgcccgcacgcc 23580503



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 21       cacgcccgcacgcctcccct 40
                ||||||||||||||||||||
Sbjct: 21359185 cacgcccgcacgcctcccct 21359204



to top

>gb|BC039908.1| Mus musculus, clone IMAGE:2582171, mRNA
          Length = 2123

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 15  cgcccgcacgcccgcacgcc 34
           ||||||||||||||||||||
Sbjct: 150 cgcccgcacgcccgcacgcc 131



to top

>ref|XM_573462.1| PREDICTED: Rattus norvegicus similar to CDNA sequence BC042698
           (LOC498239), mRNA
          Length = 1684

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 15  cgcccgcacgcccgcacgcc 34
           ||||||||||||||||||||
Sbjct: 242 cgcccgcacgcccgcacgcc 223



to top

>gb|AC114542.9| Mus musculus chromosome 9, clone RP23-111F9, complete sequence
          Length = 235924

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 10    ccgcacgcccgcacgcccgcacgc 33
             |||| |||||||||||||||||||
Sbjct: 99170 ccgcccgcccgcacgcccgcacgc 99193



to top

>emb|CT030723.18| Mouse DNA sequence from clone RP23-33L24 on chromosome 16, complete
             sequence
          Length = 241451

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 105   cagtgggtggaggcggcggtgatg 128
             |||||||||||||||| |||||||
Sbjct: 64026 cagtgggtggaggcggtggtgatg 64049



to top

>emb|CT030235.12| Mouse DNA sequence from clone RP23-240F19 on chromosome 16, complete
             sequence
          Length = 236028

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 434   agaaaaggggcgtcatcgattttg 457
             |||||||| |||||||||||||||
Sbjct: 26740 agaaaaggagcgtcatcgattttg 26717



to top

>gb|AC154415.3| Mus musculus BAC clone RP24-232A21 from chromosome 16, complete
             sequence
          Length = 177893

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 105   cagtgggtggaggcggcggtgatg 128
             |||||||||||||||| |||||||
Sbjct: 80730 cagtgggtggaggcggtggtgatg 80753



to top

>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21,
              complete sequence
          Length = 139298

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 11     cgcacgcccgcacgcccgcacgcc 34
              ||||||| ||||||||||||||||
Sbjct: 136383 cgcacgcacgcacgcccgcacgcc 136406



to top

>emb|CT025653.7| Mouse DNA sequence from clone RP23-62D21 on chromosome 9, complete
              sequence
          Length = 256470

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 10     ccgcacgcccgcacgcccgcacgc 33
              |||| |||||||||||||||||||
Sbjct: 168035 ccgcccgcccgcacgcccgcacgc 168058


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,964,215
Number of Sequences: 3902068
Number of extensions: 2964215
Number of successful extensions: 67042
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66527
Number of HSP's gapped (non-prelim): 495
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top