>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
 Frame = +3

Query: 87  GANYASGGSGILDTTGKG--TLTMRTQVQYF---KKAADNMICYPSKEEHLARSLFLLSG 251
           G ++ASGG+G L  T +     TM  Q+ YF   KK    ++     ++ +++   ++  
Sbjct: 208 GVSFASGGAGYLPQTSESWKVTTMLDQLTYFQDYKKRMKKLVGKKKTKKIVSKGAAIVVA 267

Query: 252 GGND--FSAFDPSTA----SPQAYVVKMVTTYIEHIQALYDMGARMVGILDVPPIGCTPG 413
           G ND  ++ F            ++   M  +    +  LY  GAR +G++  PPIGCTP 
Sbjct: 268 GSNDLIYTYFGNGAQHLKNDVDSFTTMMADSAASFVLQLYGYGARRIGVIGTPPIGCTPS 327

Query: 414 QR 419
           QR
Sbjct: 328 QR 329

>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 21/132 (15%)
 Frame = +3

Query: 87  GANYASGGSGILDTTGKGT--LTMRTQVQYFKKAAD--NMICYPSKEEH----------- 221
           G ++ASGG+G   TT +    + M  Q+ YF+   +  N +    K ++           
Sbjct: 281 GVSFASGGAGYNPTTSEAANAIPMLDQLTYFQDYIEKVNRLVRQEKSQYKLAGLEKTNQL 340

Query: 222 LARSLFLLSGGGNDF------SAFDPSTASPQAYVVKMVTTYIEHIQALYDMGARMVGIL 383
           +++ + ++ GG ND       S          +Y   +  +    +  LY  GAR +G++
Sbjct: 341 ISKGVAIVVGGSNDLIITYFGSGAQRLKNDIDSYTTIIADSAASFVLQLYGYGARRIGVI 400

Query: 384 DVPPIGCTPGQR 419
             PP+GC P QR
Sbjct: 401 GTPPLGCVPSQR 412

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 36.2 bits (82), Expect = 0.041
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 19/143 (13%)
 Frame = +3

Query: 33  PYLSMLPHDKILLGLCKIGANYASGGSGI-LDTT------GKGTLTMRTQV--------- 164
           PYLS  P+   L    K GA++A+ GS I L TT      G     +  Q          
Sbjct: 88  PYLS--PYLSSLGSNFKHGADFATAGSTIKLPTTIIPAHGGFSPFYLDVQYSQFRQFIPR 145

Query: 165 -QYFKKAADNMICYPSKEEHLARSLFLLSGGGNDFSA--FDPSTASPQAYVVKMVTTYIE 335
            Q+ ++          +E +  ++L+    G ND +    + +     A V  +V ++  
Sbjct: 146 SQFIRETGGIFAELVPEEYYFEKALYTFDIGQNDLTEGFLNLTVEEVNATVPDLVNSFSA 205

Query: 336 HIQALYDMGARMVGILDVPPIGC 404
           +++ +YD+GAR   I +  PIGC
Sbjct: 206 NVKKIYDLGARTFWIHNTGPIGC 228

>ESTA_PSEPU (Q6B6R8) Esterase estA precursor (EC 3.1.1.1)|
          Length = 646

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = +3

Query: 231 SLFLLSGGGNDFSAFDPSTASPQAYVVKMVTTYIEHIQALYDMGARMVGILDVPPIGCTP 410
           +L+ ++GGGNDF               +     ++ +QAL   GAR + +  +P +G TP
Sbjct: 162 ALYYITGGGNDFLQ---GRILNDVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTP 218

Query: 411 GQRAG--MPNASAPAG 452
               G   P AS  +G
Sbjct: 219 ATFGGPLQPFASQLSG 234

>ESTA_PSEAE (O33407) Esterase estA precursor (EC 3.1.1.1)|
          Length = 646

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = +3

Query: 231 SLFLLSGGGNDFSAFDPSTASPQAYVVKMVTTYIEHIQALYDMGARMVGILDVPPIGCTP 410
           +L+ ++GGGNDF               +     ++ +QAL   GAR + +  +P +G TP
Sbjct: 162 ALYYITGGGNDFLQ---GRILNDVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTP 218

Query: 411 GQRAG--MPNASAPAG 452
               G   P AS  +G
Sbjct: 219 ATFGGPLQPFASQLSG 234

>YTRP_PSEPU (P40604) Hypothetical 62.7 kDa protein in trpE-trpG intergenic|
           region precursor
          Length = 592

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
 Frame = +3

Query: 87  GANYASGGSGILDTTGKGTLTMRTQVQYFKKAADNMICYPSKEEHLAR-------SLFLL 245
           G N+A GG          T T  T +   +  A  ++    K  +LA        +L+ L
Sbjct: 93  GNNWAVGGYTTQQILDSITSTSETVIPPGRPGAGQVL--REKPGYLANGLRADPNALYYL 150

Query: 246 SGGGNDF-SAFDPSTASPQAYVVKMVTTYIEHIQALYDMGARMVGILDVPPIGCTP 410
           +GGGNDF      S A   A   ++  +     QAL   GAR + +  +P +G TP
Sbjct: 151 TGGGNDFLQGLVNSPADAAAAGARLAAS----AQALQQGGARYIMVWLLPDLGQTP 202

>HRP1_PLAFA (P05227) Histidine-rich protein precursor (Clone PFHRP-II)|
          Length = 332

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = +2

Query: 314 DGHHLHRAHPGALRHGSAHGGDPRRAADRVHAGAEGRHA 430
           D HH   AH  A  H + H  D   AAD  HA  +  HA
Sbjct: 188 DAHHAADAHHAAYAHHAHHAADAHHAADAHHA-TDAHHA 225



 Score = 32.0 bits (71), Expect = 0.78
 Identities = 17/39 (43%), Positives = 18/39 (46%)
 Frame = +2

Query: 314 DGHHLHRAHPGALRHGSAHGGDPRRAADRVHAGAEGRHA 430
           D HH   AH  A  H + H  D   AAD  HA A   HA
Sbjct: 167 DAHHAADAHHAAYAHHAHHAADAHHAADAHHA-AYAHHA 204



 Score = 32.0 bits (71), Expect = 0.78
 Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
 Frame = +2

Query: 314 DGHHLHRAHPGALRHGSAHGGDPRRA-----ADRVHAGAEGRHA 430
           D HH H AH  A  H + H  D   A     A   H  A+  HA
Sbjct: 65  DAHHAHHAHHAADAHHAHHAADAHHAHHAADAHHAHHAADAHHA 108



 Score = 30.0 bits (66), Expect = 2.9
 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
 Frame = +2

Query: 314 DGHHLHRA------HPGALRHGSAHGGDPRRAADRVHAGAEGRHA 430
           D HH H A      H  A  H + H  D   AAD  HA A   HA
Sbjct: 140 DAHHAHHAADAHHAHHAAYAHHAHHASDAHHAADAHHA-AYAHHA 183



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = +2

Query: 314 DGHHLHRAHPGALRHGSAHGGDPRRAADRVHAGAEGRHA 430
           D HH   AH     H + H  D   A D  HA A+  HA
Sbjct: 209 DAHHAADAHHATDAHHAHHAADAHHATDAHHA-ADAHHA 246

>VGLM_INSV (Q01260) Envelope polyprotein precursor (M polyprotein) [Contains:|
           Glycoprotein G1; Glycoprotein G2]
          Length = 1110

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +3

Query: 240 LLSGGGNDFSAFDPSTASPQAYVVKMVTTYIEHIQALYDM 359
           LLSGGG  FS  D S+++ Q +VV     YI+ ++  YD+
Sbjct: 614 LLSGGGTVFSLNDKSSSTAQKFVV-----YIKKVRIQYDV 648

>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 19/138 (13%)
 Frame = +3

Query: 87  GANYASGGSGI------LDTTGKGTLTMRTQVQYFKKAADNMICYPSK----------EE 218
           GAN+A+ GS I      L  +G    ++  Q   F    +      S+           +
Sbjct: 100 GANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQFYNFHNRSQTVRSRGGVYKTMLPESD 159

Query: 219 HLARSLFLLSGGGNDFSA---FDPSTASPQAYVVKMVTTYIEHIQALYDMGARMVGILDV 389
             +++L+    G ND +A    + +    +  V ++++ ++  I+ +Y  G R   I + 
Sbjct: 160 SFSKALYTFDIGQNDLTAGYFANKTVEQVETEVPEIISQFMNAIKNIYGQGGRYFWIHNT 219

Query: 390 PPIGCTPGQRAGMPNASA 443
            PIGC        PN ++
Sbjct: 220 GPIGCLAYVIERFPNKAS 237

>GP176_RAT (Q64017) Probable G-protein coupled receptor 176 (G-protein coupled|
           receptor AGR9) (RBU-15)
          Length = 513

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 18/69 (26%), Positives = 35/69 (50%)
 Frame = +3

Query: 93  NYASGGSGILDTTGKGTLTMRTQVQYFKKAADNMICYPSKEEHLARSLFLLSGGGNDFSA 272
           N  S GSG+++ + + ++   +Q+          I  PS++E  + + +L   G  DF A
Sbjct: 345 NVVSTGSGVVEPSLEPSMRSGSQLLEMFHIGQQQIFKPSEDEEESEAKYL---GSTDFQA 401

Query: 273 FDPSTASPQ 299
            +  T+SP+
Sbjct: 402 KEVLTSSPE 410

>RSUA_SALTY (P65840) Ribosomal small subunit pseudouridine synthase A (EC|
           5.4.99.-) (16S pseudouridylate 516 synthase) (16S
           pseudouridine 516 synthase) (rRNA-uridine isomerase A)
           (rRNA pseudouridylate synthase A)
          Length = 231

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = +2

Query: 14  FRDEPQAVPLHAAARQDLTRP----LQDWRQLRFRWIRHPRHHGKRDAHDADTSPVLQEG 181
           F DEP A  LHAA R D+       + D  Q   R I  PRHH ++       SPV  + 
Sbjct: 86  FLDEPVAYKLHAAGRLDIDTTGLVLMTDDGQWSHR-ITSPRHHCEKTYLVTLESPVADDT 144

Query: 182 GGQ 190
             Q
Sbjct: 145 AAQ 147

>RSUA_SALTI (P65841) Ribosomal small subunit pseudouridine synthase A (EC|
           5.4.99.-) (16S pseudouridylate 516 synthase) (16S
           pseudouridine 516 synthase) (rRNA-uridine isomerase A)
           (rRNA pseudouridylate synthase A)
          Length = 231

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = +2

Query: 14  FRDEPQAVPLHAAARQDLTRP----LQDWRQLRFRWIRHPRHHGKRDAHDADTSPVLQEG 181
           F DEP A  LHAA R D+       + D  Q   R I  PRHH ++       SPV  + 
Sbjct: 86  FLDEPVAYKLHAAGRLDIDTTGLVLMTDDGQWSHR-ITSPRHHCEKTYLVTLESPVADDT 144

Query: 182 GGQ 190
             Q
Sbjct: 145 AAQ 147

>HISX_METCA (Q606Q2) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)|
          Length = 436

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +3

Query: 93  NYASGGSGILDTTGKGTLTMRTQVQYFKKAADNMICYPSKEEHLARSLFLLSGG 254
           +Y +G + +L T+G    +    V  F+K +  + C P   + L R+  LL+ G
Sbjct: 366 DYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSLIYCSPDGADQLGRTASLLAWG 419

>UREE_BORPA (Q7W418) Urease accessory protein ureE|
          Length = 205

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = +2

Query: 311 QDGHHLHRAHPGALRHGSAHGGDPRRAADRVHA--GAEGRHAQRECTS 448
           Q  +H H AHP A  H   HG         VH+  G  G+H + +  S
Sbjct: 166 QAAYHAHEAHPHAHSHAGGHG--------HVHSGHGHGGKHGEHDAES 205

>UREE_BORBR (Q7WFF2) Urease accessory protein ureE|
          Length = 205

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = +2

Query: 311 QDGHHLHRAHPGALRHGSAHGGDPRRAADRVHA--GAEGRHAQRECTS 448
           Q  +H H AHP A  H   HG         VH+  G  G+H + +  S
Sbjct: 166 QAAYHAHEAHPHAHSHAGGHG--------HVHSGHGHGGKHGEHDAES 205

>LUXS_CAMJR (Q5HTR6) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2|
           production protein luxS) (AI-2 synthesis protein)
          Length = 164

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = +3

Query: 255 GNDFSAFDPSTASPQAYVVKMVTTY-IEHIQALY---DMGARMVGILDVPPIGCTPG 413
           G+D S FD     P   ++    T+ +EH+ A +    + +  V I+D+ P+GC  G
Sbjct: 30  GDDISVFDLRFCIPNKDIMSEKGTHTLEHLFAGFMRDHLNSNSVEIIDISPMGCRTG 86

>LUXS_CAMJE (Q9PN97) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2|
           production protein luxS) (AI-2 synthesis protein)
          Length = 164

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = +3

Query: 255 GNDFSAFDPSTASPQAYVVKMVTTY-IEHIQALY---DMGARMVGILDVPPIGCTPG 413
           G+D S FD     P   ++    T+ +EH+ A +    + +  V I+D+ P+GC  G
Sbjct: 30  GDDISVFDLRFCIPNKDIMSEKGTHTLEHLFAGFMRDHLNSNSVEIIDISPMGCRTG 86

>LPXB_COXBU (Q83DS5) Lipid-A-disaccharide synthase (EC 2.4.1.182)|
          Length = 376

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
 Frame = +3

Query: 150 MRTQVQYFKKAADNMIC---YPSKEEHLARSLFLLSGGGNDFSAFDPSTASPQAYVVKMV 320
           M+T  +YFKK   +++    YP    H+A+       G        P   + +   +K +
Sbjct: 76  MQTLKRYFKKTPPDLVVFIDYPGFNLHMAKQA--KKAGIKVLYYVSPQIWAWRYGRIKKI 133

Query: 321 TTYIEHIQALYDMGARMVGILDVPPIGCTPGQRAGMPNASAPAGQL 458
             Y++H+  L+D   ++    +VP          G P A+AP   L
Sbjct: 134 KKYVDHMAVLFDFEEKLYQKENVPV------SFVGHPLANAPTPSL 173

>UREE_BORPE (Q7VUD4) Urease accessory protein ureE|
          Length = 205

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = +2

Query: 311 QDGHHLHRAHPGALRHGSAHGGDPRRAADRVHA--GAEGRHAQRECTS 448
           Q  +H H AHP A  H   HG         VH+  G  G+H + +  S
Sbjct: 166 QAAYHAHEAHPHAHFHAGGHG--------HVHSGHGHGGKHGEHDAES 205

>SRA24_CAEEL (O62368) Serpentine receptor class alpha-24 (Protein sra-24)|
          Length = 339

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +3

Query: 270 AFDP--STASPQAYVVKM--VTTYIEHIQALYDMGARMVGILDVPPIGCTP 410
           AFD   S  +P+ Y+     V+ ++  IQ ++ +G   VG+  VPP+G  P
Sbjct: 131 AFDRLISCYTPKYYLSHQYYVSIFLLFIQLIFTLGTYYVGLYGVPPLGYEP 181

>PTC2_MOUSE (O35595) Protein patched homolog 2 (PTC2)|
          Length = 1182

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
 Frame = +3

Query: 66   LLGLCKIGANYASGGSGILDTTGKGT---LTMRTQVQYFKKAADNMICYPSKE-EHLARS 233
            LLGL   GA     G  + D   +GT     +  Q++YF      ++     +  H  R+
Sbjct: 696  LLGLSLYGATLVQDGLALTDVVPRGTKEHAFLSAQLRYFSLYEVALVTQGGFDYAHSQRA 755

Query: 234  LFLLSGGGNDFSAF--DPSTASPQAYVVKMVTTYIEHIQALYD 356
            LF L    +   A    P+T +P+ + +    ++++ IQA +D
Sbjct: 756  LFDLHQRFSSLKAVLPPPATQAPRTW-LHYYRSWLQGIQAAFD 797

>STAD_SPIOL (P28645) Acyl-[acyl-carrier-protein] desaturase, chloroplast|
           precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase)
          Length = 399

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
 Frame = -2

Query: 295 GLAVEGSKAEK---SLPPPLRRKRDRAR 221
           GL+ EG KA+    SLPP +RR  +RAR
Sbjct: 351 GLSSEGQKAQDYVCSLPPRIRRLEERAR 378

>TAF4_DROME (P47825) Transcription initiation factor TFIID subunit 4|
            (Transcription initiation factor TFIID 110 kDa subunit)
            (p110) (TAFII-110) (110 kDa TBP-associated factor)
          Length = 921

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +3

Query: 51   PHDKILLGLCKIGANYASGGSGILDTTGKGTLTMRTQVQYFKKAADNMICYPSKEEHLAR 230
            P  K+ L    + +   S G G+L ++G    T+R +++  +    +M+ Y  +E    R
Sbjct: 854  PRKKLKLDGETVSSGAGSSGGGVLSSSGSAPTTLRPRIK--RVNLRDMLFYMEQEREFCR 911

Query: 231  SLFL 242
            S  L
Sbjct: 912  SSML 915

>FCG2A_HUMAN (P12318) Low affinity immunoglobulin gamma Fc region receptor II-a|
           precursor (Fc-gamma RII-a) (FcRII-a) (IgG Fc receptor
           II-a) (Fc-gamma-RIIa) (CD32 antigen) (CDw32)
          Length = 317

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 144 LTMRTQVQYFKKAADNMI-CYPSKEEHLARSLFLLSGGGNDFSAFDPSTASPQA 302
           L ++T    F++    M+ C+  K++ L +  F  +G    FS  DP+ + PQA
Sbjct: 124 LVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSRLDPTFSIPQA 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,861,665
Number of Sequences: 219361
Number of extensions: 1310128
Number of successful extensions: 4963
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4950
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)