ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast71b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
2dbj|AK071697.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
3dbj|AK070277.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
4dbj|AK060201.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
5dbj|AK059954.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-04
7emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa... 54 4e-04
8gb|AY105081.1| Zea mays PCO097316 mRNA sequence 52 0.002
9ref|XM_467708.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.025
10ref|XM_506961.1| PREDICTED Oryza sativa (japonica cultivar-group... 48 0.025
11ref|XM_467707.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.025
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
13dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
14dbj|AK111360.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
15dbj|AK099325.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
16dbj|AK070261.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
17ref|NM_188051.1| Oryza sativa (japonica cultivar-group), Ozsa847... 44 0.40
18gb|BT018454.1| Zea mays clone EL01N0408D11.d mRNA sequence 44 0.40
19dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
20dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
21dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
22ref|NM_188071.1| Oryza sativa (japonica cultivar-group), Ozsa849... 42 1.6
23emb|AL445930.11| Human DNA sequence from clone RP11-366O20 on ch... 42 1.6
24dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 42 1.6
25gb|AE011793.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 1.6
26gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 42 1.6
27ref|XM_426508.1| PREDICTED: Gallus gallus similar to WNT8B (LOC4... 40 6.2
28ref|XM_953781.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
29ref|XM_959199.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
30ref|XM_327666.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
31ref|XM_329323.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
32gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 6.2
33ref|XM_798386.1| Trypanosoma cruzi strain CL Brener NAD-dependen... 40 6.2
34ref|XM_505218.1| Yarrowia lipolytica CLIB122, YALI0F09669g predi... 40 6.2
35emb|AL034402.9|HS30G7 Human DNA sequence from clone RP1-30G7 on ... 40 6.2
36gb|AC108871.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
37dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
38gb|AC084568.1|CBRG37K11 Caenorhabditis briggsae cosmid G37K11, c... 40 6.2
39gb|AY753292.1| Gallus gallus wingless-type MMTV integration site... 40 6.2
40dbj|AK068220.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
41gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
42emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 6.2
43emb|AL590389.8| Mouse DNA sequence from clone RP23-393F23 on chr... 40 6.2 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                       
Query: 87       ggcgccaactacgcttccggtggatccggcatcctcgac 125
                |||||||||||||| ||| | ||||||||||||||||||
Sbjct: 23332092 ggcgccaactacgcctccagcggatccggcatcctcgac 23332054
to top
>dbj|AK071697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108M03, full
           insert sequence
          Length = 1582

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 87  ggcgccaactacgcttccggtggatccggcatcctcgac 125
           |||||||||||||| ||| | ||||||||||||||||||
Sbjct: 430 ggcgccaactacgcctccagcggatccggcatcctcgac 468
to top
>dbj|AK070277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050D08, full
           insert sequence
          Length = 1741

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 87  ggcgccaactacgcttccggtggatccggcatcctcgac 125
           |||||||||||||| ||| | ||||||||||||||||||
Sbjct: 430 ggcgccaactacgcctccagcggatccggcatcctcgac 468
to top
>dbj|AK060201.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-G04, full
           insert sequence
          Length = 1637

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 87  ggcgccaactacgcttccggtggatccggcatcctcgac 125
           |||||||||||||| ||| | ||||||||||||||||||
Sbjct: 504 ggcgccaactacgcctccagcggatccggcatcctcgac 542
to top
>dbj|AK059954.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-C12, full
           insert sequence
          Length = 1328

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 87  ggcgccaactacgcttccggtggatccggcatcctcgac 125
           |||||||||||||| ||| | ||||||||||||||||||
Sbjct: 195 ggcgccaactacgcctccagcggatccggcatcctcgac 233
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                       
Query: 87       ggcgccaactacgcttccggtggatccggcatcctcgac 125
                |||||||||||||| ||| | ||||||||||||||||||
Sbjct: 23260283 ggcgccaactacgcctccagcggatccggcatcctcgac 23260245
to top
>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 168063

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                     
Query: 87     ggcgccaactacgcttccggtggatccggcatcctcgac 125
              |||||||||||||| ||| | ||||||||||||||||||
Sbjct: 145210 ggcgccaactacgcctccagcggatccggcatcctcgac 145172
to top
>gb|AY105081.1| Zea mays PCO097316 mRNA sequence
          Length = 1518

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 84  attggcgccaactacgcttccggtggatccggcatcctcgacaccacgggaaaagggacg 143
           ||||| ||||| ||||| || || ||||| ||||| ||| ||||||||||||| ||||| 
Sbjct: 523 attggtgccaattacgcgtctggcggatctggcattctcaacaccacgggaaacgggaca 582

                 
Query: 144 ctcacg 149
           ||||||
Sbjct: 583 ctcacg 588



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 244 tcagcggcggcggcaacgacttctccgccttc 275
           |||||| ||||||||| |||||||||||||||
Sbjct: 686 tcagcgccggcggcaatgacttctccgccttc 717
to top
>ref|XM_467708.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 872

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 87  ggcgccaactacgcttccggtggatccggcatcctcgacaccac 130
           |||||||| |||||||| || ||||||||||| ||||| |||||
Sbjct: 692 ggcgccaattacgcttctggaggatccggcattctcgataccac 735
to top
>ref|XM_506961.1| PREDICTED Oryza sativa (japonica cultivar-group), P0516G10.12-1
           mRNA
          Length = 1637

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 87  ggcgccaactacgcttccggtggatccggcatcctcgacaccac 130
           |||||||| |||||||| || ||||||||||| ||||| |||||
Sbjct: 591 ggcgccaattacgcttctggaggatccggcattctcgataccac 634



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 234 ctcttcctcctcagcggcggcggcaacgac 263
           ||||||||| |||||| |||||||||||||
Sbjct: 774 ctcttcctcatcagcgacggcggcaacgac 803
to top
>ref|XM_467707.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1637

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 87  ggcgccaactacgcttccggtggatccggcatcctcgacaccac 130
           |||||||| |||||||| || ||||||||||| ||||| |||||
Sbjct: 590 ggcgccaattacgcttctggaggatccggcattctcgataccac 633



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 234 ctcttcctcctcagcggcggcggcaacgac 263
           ||||||||| |||||| |||||||||||||
Sbjct: 773 ctcttcctcatcagcgacggcggcaacgac 802
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 87       ggcgccaactacgcttccggtggatccggcatcctcgacaccac 130
                |||||||| |||||||| || ||||||||||| ||||| |||||
Sbjct: 30985401 ggcgccaattacgcttctggaggatccggcattctcgataccac 30985358



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 234      ctcttcctcctcagcggcggcggcaacgac 263
                ||||||||| |||||| |||||||||||||
Sbjct: 30985022 ctcttcctcatcagcgacggcggcaacgac 30984993
to top
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0516G10
          Length = 148937

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 87    ggcgccaactacgcttccggtggatccggcatcctcgacaccac 130
             |||||||| |||||||| || ||||||||||| ||||| |||||
Sbjct: 40357 ggcgccaattacgcttctggaggatccggcattctcgataccac 40314



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 234   ctcttcctcctcagcggcggcggcaacgac 263
             ||||||||| |||||| |||||||||||||
Sbjct: 39978 ctcttcctcatcagcgacggcggcaacgac 39949
to top
>dbj|AK111360.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-H05, full
           insert sequence
          Length = 888

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 87  ggcgccaactacgcttccggtggatccggcatcctcgacaccac 130
           |||||||| |||||||| || ||||||||||| ||||| |||||
Sbjct: 692 ggcgccaattacgcttctggaggatccggcattctcgataccac 735
to top
>dbj|AK099325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033016K19, full
           insert sequence
          Length = 1637

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 87  ggcgccaactacgcttccggtggatccggcatcctcgacaccac 130
           |||||||| |||||||| || ||||||||||| ||||| |||||
Sbjct: 590 ggcgccaattacgcttctggaggatccggcattctcgataccac 633



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 234 ctcttcctcctcagcggcggcggcaacgac 263
           ||||||||| |||||| |||||||||||||
Sbjct: 773 ctcttcctcatcagcgacggcggcaacgac 802
to top
>dbj|AK070261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042P13, full
           insert sequence
          Length = 1637

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 87  ggcgccaactacgcttccggtggatccggcatcctcgacaccac 130
           |||||||| |||||||| || ||||||||||| ||||| |||||
Sbjct: 591 ggcgccaattacgcttctggaggatccggcattctcgataccac 634



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 234 ctcttcctcctcagcggcggcggcaacgac 263
           ||||||||| |||||| |||||||||||||
Sbjct: 774 ctcttcctcatcagcgacggcggcaacgac 803
to top
>ref|NM_188051.1| Oryza sativa (japonica cultivar-group), Ozsa8471 predicted mRNA
          Length = 1479

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 233  cctcttcctcctcagcggcggcggca 258
            ||||||||||||| ||||||||||||
Sbjct: 1254 cctcttcctcctcggcggcggcggca 1279
to top
>gb|BT018454.1| Zea mays clone EL01N0408D11.d mRNA sequence
          Length = 1429

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 226 cgcggtccctcttcctcctcagcggcggcggcaacgac 263
           |||||||||| |||||| |||||  |||||||||||||
Sbjct: 621 cgcggtccctgttcctcgtcagcaccggcggcaacgac 658
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 233     cctcttcctcctcagcggcggcggca 258
               ||||||||||||| ||||||||||||
Sbjct: 9349509 cctcttcctcctcggcggcggcggca 9349534



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 233     cctcttcctcctcagcggcggcggc 257
               ||||||||||||| |||||||||||
Sbjct: 9429634 cctcttcctcctctgcggcggcggc 9429610
to top
>dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0693B08
          Length = 140812

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 233   cctcttcctcctcagcggcggcggca 258
             ||||||||||||| ||||||||||||
Sbjct: 19836 cctcttcctcctcggcggcggcggca 19861



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 233   cctcttcctcctcagcggcggcggc 257
             ||||||||||||| |||||||||||
Sbjct: 99961 cctcttcctcctctgcggcggcggc 99937
to top
>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0667A10
          Length = 152237

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 233    cctcttcctcctcagcggcggcggca 258
              ||||||||||||| ||||||||||||
Sbjct: 126103 cctcttcctcctcggcggcggcggca 126128
to top
>ref|NM_188071.1| Oryza sativa (japonica cultivar-group), Ozsa8491 predicted mRNA
          Length = 660

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 233 cctcttcctcctcagcggcggcggc 257
           ||||||||||||| |||||||||||
Sbjct: 75  cctcttcctcctctgcggcggcggc 99
to top
>emb|AL445930.11| Human DNA sequence from clone RP11-366O20 on chromosome 9 Contains the 5'
              end of a novel gene, the PPP6C gene for protein phosphatase
              6 (catalytic subunit), a novel gene, a phosphoribosyl
              pyrophosphate synthetase 1(PRPS1) pseudogene, a laminin
              receptor 1 (LAMR1) pseudogene, the 5' end of the gene for
              Rab9 effector p40 (RAB9P40), and five CpG islands, complete
              sequence
          Length = 169149

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 276    gacccctccaccgccagccca 296
              |||||||||||||||||||||
Sbjct: 156566 gacccctccaccgccagccca 156586
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 331     tcgagcacatccaggcgctct 351
               |||||||||||||||||||||
Sbjct: 2560031 tcgagcacatccaggcgctct 2560011
to top
>gb|AE011793.1| Xanthomonas axonopodis pv. citri str. 306,  section 171 of 469 of the
             complete genome
          Length = 11467

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 331   tcgagcacatccaggcgctct 351
             |||||||||||||||||||||
Sbjct: 10131 tcgagcacatccaggcgctct 10151
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 331     tcgagcacatccaggcgctct 351
               |||||||||||||||||||||
Sbjct: 2581924 tcgagcacatccaggcgctct 2581904
to top
>ref|XM_426508.1| PREDICTED: Gallus gallus similar to WNT8B (LOC428953), mRNA
          Length = 1491

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 280  cctccaccgccagcccacag 299
            ||||||||||||||||||||
Sbjct: 1321 cctccaccgccagcccacag 1302
to top
>ref|XM_953781.1| Neurospora crassa OR74A hypothetical protein (NCU07381.1) partial
           mRNA
          Length = 2631

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 tacttcaagaaggcggcgga 187
           ||||||||||||||||||||
Sbjct: 154 tacttcaagaaggcggcgga 173
to top
>ref|XM_959199.1| Neurospora crassa OR74A hypothetical protein (NCU02134.1) partial
            mRNA
          Length = 2643

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 233  cctcttcctcctcagcggcg 252
            ||||||||||||||||||||
Sbjct: 1882 cctcttcctcctcagcggcg 1863
to top
>ref|XM_327666.1| Neurospora crassa OR74A hypothetical protein (NCU07381.1) partial
           mRNA
          Length = 2631

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 tacttcaagaaggcggcgga 187
           ||||||||||||||||||||
Sbjct: 154 tacttcaagaaggcggcgga 173
to top
>ref|XM_329323.1| Neurospora crassa OR74A hypothetical protein (NCU02134.1) partial
            mRNA
          Length = 2643

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 233  cctcttcctcctcagcggcg 252
            ||||||||||||||||||||
Sbjct: 1882 cctcttcctcctcagcggcg 1863
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 287     cgccagcccacaggcctacg 306
               ||||||||||||||||||||
Sbjct: 4234341 cgccagcccacaggcctacg 4234322
to top
>ref|XM_798386.1| Trypanosoma cruzi strain CL Brener NAD-dependent deacetylase
           (Tc00.1047053447255.20) partial mRNA
          Length = 726

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 cgtcaagatggtcaccacct 327
           ||||||||||||||||||||
Sbjct: 36  cgtcaagatggtcaccacct 17
to top
>ref|XM_505218.1| Yarrowia lipolytica CLIB122, YALI0F09669g predicted mRNA
          Length = 663

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 238 tcctcctcagcggcggcggc 257
           ||||||||||||||||||||
Sbjct: 272 tcctcctcagcggcggcggc 253
to top
>emb|AL034402.9|HS30G7 Human DNA sequence from clone RP1-30G7 on chromosome Xp11.3-11.4
             Contains a novel gene, an actin, beta (ACTB) pseudogene
             and a CpG island, complete sequence
          Length = 123637

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 189   aacatgatctgctacccaagcaaggagg 216
             ||||||||||| | ||||||||||||||
Sbjct: 10151 aacatgatctggtccccaagcaaggagg 10124
to top
>gb|AC108871.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0077M24, complete sequence
          Length = 128920

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 233   cctcttcctcctcagcggcggcggcaac 260
             |||| |||||||| ||||||||||||||
Sbjct: 73940 cctcctcctcctcggcggcggcggcaac 73913
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 233      cctcttcctcctcagcggcggcggcaac 260
                |||| |||||||| ||||||||||||||
Sbjct: 20638932 cctcctcctcctcggcggcggcggcaac 20638905
to top
>gb|AC084568.1|CBRG37K11 Caenorhabditis briggsae cosmid G37K11, complete sequence
          Length = 38194

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  gcaacgacttctccgccttc 275
            ||||||||||||||||||||
Sbjct: 3298 gcaacgacttctccgccttc 3317
to top
>gb|AY753292.1| Gallus gallus wingless-type MMTV integration site family member 8b
           (WNT8b) mRNA, partial cds
          Length = 834

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 280 cctccaccgccagcccacag 299
           ||||||||||||||||||||
Sbjct: 796 cctccaccgccagcccacag 777
to top
>dbj|AK068220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145N15, full
           insert sequence
          Length = 1889

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 233 cctcttcctcctcagcggcggcggcaac 260
           |||| |||||||| ||||||||||||||
Sbjct: 306 cctcctcctcctcggcggcggcggcaac 333
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 233      cctcttcctcctcagcggcggcggcaac 260
                |||| |||||||| ||||||||||||||
Sbjct: 20949167 cctcctcctcctcggcggcggcggcaac 20949140
to top
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 238     tcctcctcagcggcggcggc 257
               ||||||||||||||||||||
Sbjct: 1322413 tcctcctcagcggcggcggc 1322394
to top
>emb|AL590389.8| Mouse DNA sequence from clone RP23-393F23 on chromosome 2, complete
              sequence
          Length = 207901

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 9      ctgggtttcgagatgagccccaag 32
              |||||||||||||| |||||||||
Sbjct: 173276 ctgggtttcgagatcagccccaag 173253


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,100,350
Number of Sequences: 3902068
Number of extensions: 3100350
Number of successful extensions: 62960
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62368
Number of HSP's gapped (non-prelim): 592
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top