ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast71a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BCAT2_ARATH (Q9M439) Branched-chain-amino-acid aminotransferase ... 60 2e-09
2BCAT3_ARATH (Q9M401) Branched-chain-amino-acid aminotransferase ... 53 2e-07
3BCAT5_ARATH (Q9FYA6) Branched-chain-amino-acid aminotransferase ... 52 3e-07
4BCAT7_ARATH (Q9LPM8) Putative branched-chain-amino-acid aminotra... 47 1e-05
5BCAT1_ARATH (Q93Y32) Branched-chain-amino-acid aminotransferase ... 44 1e-04
6BCAT6_ARATH (Q9LPM9) Branched-chain-amino-acid aminotransferase ... 43 3e-04
7BCAT4_ARATH (Q9LE06) Probable branched-chain-amino-acid aminotra... 37 0.019
8ILVE_HELPJ (Q9ZJF1) Branched-chain-amino-acid aminotransferase (... 32 0.46
9ILVE_HAEIN (P54689) Branched-chain-amino-acid aminotransferase (... 32 0.46
10ILVE_HELPY (O26004) Branched-chain-amino-acid aminotransferase (... 29 3.0
11BCA1_SCHPO (O14370) Branched-chain-amino-acid aminotransferase, ... 29 3.9
12AATF_HUMAN (Q9NY61) Protein AATF (Apoptosis-antagonizing transcr... 28 8.6

>BCAT2_ARATH (Q9M439) Branched-chain-amino-acid aminotransferase 2, chloroplast|
           precursor (EC 2.6.1.42) (Atbcat-2)
          Length = 388

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 25/45 (55%), Positives = 36/45 (80%)
 Frame = +1

Query: 61  PVDRSDEESGGDIDWDNLGFGLTPTDYMYVMRCSREEGGFSRGEL 195
           P+ ++ ++   D+DWDNLGFGL P DYMYVM+CS+ +G F++GEL
Sbjct: 44  PLYQNGDDVYADLDWDNLGFGLNPADYMYVMKCSK-DGEFTQGEL 87



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>BCAT3_ARATH (Q9M401) Branched-chain-amino-acid aminotransferase 3, chloroplast|
           precursor (EC 2.6.1.42) (Atbcat-3)
          Length = 413

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 23/34 (67%), Positives = 28/34 (82%)
 Frame = +1

Query: 94  DIDWDNLGFGLTPTDYMYVMRCSREEGGFSRGEL 195
           DIDWD +GFGL P DYMYVM+C+  +G FS+GEL
Sbjct: 78  DIDWDTVGFGLKPADYMYVMKCN-IDGEFSKGEL 110



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>BCAT5_ARATH (Q9FYA6) Branched-chain-amino-acid aminotransferase 5, chloroplast|
           precursor (EC 2.6.1.42) (Atbcat-5)
          Length = 415

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 22/34 (64%), Positives = 28/34 (82%)
 Frame = +1

Query: 94  DIDWDNLGFGLTPTDYMYVMRCSREEGGFSRGEL 195
           +IDWD + FGL PTDYMY M+CSR +G FS+G+L
Sbjct: 81  EIDWDKIDFGLKPTDYMYAMKCSR-DGEFSQGQL 113



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>BCAT7_ARATH (Q9LPM8) Putative branched-chain-amino-acid aminotransferase 7|
           (Atbcat-7)
          Length = 367

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 26/59 (44%), Positives = 35/59 (59%)
 Frame = +1

Query: 19  LLPSRWKSSLPQLDPVDRSDEESGGDIDWDNLGFGLTPTDYMYVMRCSREEGGFSRGEL 195
           + PS   SS P      ++DE+   ++ WD LGF L PTDYMYV +C + E  FS GE+
Sbjct: 1   MAPSVHPSSSPLF--TSKADEKYA-NVKWDELGFALVPTDYMYVAKCKQGE-SFSTGEI 55



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>BCAT1_ARATH (Q93Y32) Branched-chain-amino-acid aminotransferase 1,|
           mitochondrial precursor (EC 2.6.1.42) (Atbcat-1)
          Length = 384

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 21/43 (48%), Positives = 28/43 (65%)
 Frame = +1

Query: 67  DRSDEESGGDIDWDNLGFGLTPTDYMYVMRCSREEGGFSRGEL 195
           +R DEE   D+DWDNLGF L  TD+M+  +  R +G F +G L
Sbjct: 43  EREDEEYA-DVDWDNLGFSLVRTDFMFATKSCR-DGNFEQGYL 83



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>BCAT6_ARATH (Q9LPM9) Branched-chain-amino-acid aminotransferase 6 (EC 2.6.1.42)|
           (Atbcat-6)
          Length = 356

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
 Frame = +1

Query: 49  PQLDPVDRSDE--ESGGDIDWDNLGFGLTPTDYMYVMRCSREEGGFSRGEL 195
           P   P+  + E  E   ++ W+ LGF LTP DYMYV +C R+   F++G++
Sbjct: 3   PSSSPLRTTSETDEKYANVKWEELGFALTPIDYMYVAKC-RQGESFTQGKI 52



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>BCAT4_ARATH (Q9LE06) Probable branched-chain-amino-acid aminotransferase 4|
           (Atbcat-4)
          Length = 354

 Score = 36.6 bits (83), Expect = 0.019
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = +1

Query: 61  PVDRSDEESGGDIDWDNLGFGLTPTDYMYVMRCSREEGGFSRGEL 195
           PV  SDE+   ++ W+ L F    TDYMYV +C+  E  F  G++
Sbjct: 9   PVSVSDEKYA-NVKWEELAFKFVRTDYMYVAKCNHGE-SFQEGKI 51



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>ILVE_HELPJ (Q9ZJF1) Branched-chain-amino-acid aminotransferase (EC 2.6.1.42)|
           (BCAT)
          Length = 340

 Score = 32.0 bits (71), Expect = 0.46
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +1

Query: 94  DIDWDNLGFGLTPTDYMYVMRCSREEGGFSRGEL 195
           ++DW NLGF    TD+ ++   + + G +S+GEL
Sbjct: 6   NLDWKNLGFSYIKTDFRFI--ATYKNGSWSQGEL 37



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>ILVE_HAEIN (P54689) Branched-chain-amino-acid aminotransferase (EC 2.6.1.42)|
           (BCAT)
          Length = 343

 Score = 32.0 bits (71), Expect = 0.46
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 94  DIDWDNLGFGLTPTDYMYVMRCSREEGGFSRGEL 195
           D+DW+NLGF    TDY ++     ++G +  G+L
Sbjct: 3   DLDWNNLGFSYIKTDYRFIAHW--KDGKWDEGKL 34



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>ILVE_HELPY (O26004) Branched-chain-amino-acid aminotransferase (EC 2.6.1.42)|
           (BCAT)
          Length = 340

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 94  DIDWDNLGFGLTPTDYMYVMRCSREEGGFSRGEL 195
           ++DW NLGF    TD+ ++   + + G +S+G L
Sbjct: 6   NLDWKNLGFSYIKTDFRFI--ATYKNGSWSQGGL 37



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>BCA1_SCHPO (O14370) Branched-chain-amino-acid aminotransferase, mitochondrial|
           precursor (EC 2.6.1.42) (BCAT)
          Length = 380

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +1

Query: 100 DWDNLGFGLTPTDYMYVMRCSREEG 174
           +W +L FG   TD+M +M+ +RE+G
Sbjct: 31  EWKSLKFGENFTDHMLIMKWNREKG 55



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>AATF_HUMAN (Q9NY61) Protein AATF (Apoptosis-antagonizing transcription factor)|
           (Rb-binding protein Che-1)
          Length = 560

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 34  WKSSLPQLDPVDRSDEESGGDIDWDNLG 117
           W+ +LP     + SDEE  GD D + LG
Sbjct: 86  WEQTLPGSSDEEISDEEGSGDEDSEGLG 113


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.141    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,801,264
Number of Sequences: 219361
Number of extensions: 241033
Number of successful extensions: 519
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 80,573,946
effective HSP length: 41
effective length of database: 71,580,145
effective search space used: 1717923480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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