ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast71a09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ574850.2|HVU574850 Hordeum vulgare bcat-1 gene for branched-chain amino acid aminotransferase, exons 1-7 Length = 4318 Score = 248 bits (125), Expect = 5e-63 Identities = 128/129 (99%) Strand = Plus / Plus Query: 69 caggtccgacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcac 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2576 caggtccgacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcac 2635 Query: 129 cccgacggactacatgtatgtcatgcggtgctcgcgggaggagggcggcttctcccgcgg 188 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2636 cccgacggactacatgtacgtcatgcggtgctcgcgggaggagggcggcttctcccgcgg 2695 Query: 189 cgagctcgc 197 ||||||||| Sbjct: 2696 cgagctcgc 2704 Score = 145 bits (73), Expect = 6e-32 Identities = 73/73 (100%) Strand = Plus / Plus Query: 1 gacggaggcggccgctctcttctcccgtcccggtggaagtcgtcgctgccgcagctggac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2345 gacggaggcggccgctctcttctcccgtcccggtggaagtcgtcgctgccgcagctggac 2404 Query: 61 cccgtcgacaggt 73 ||||||||||||| Sbjct: 2405 cccgtcgacaggt 2417
>ref|XM_470612.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1248 Score = 206 bits (104), Expect = 2e-50 Identities = 161/180 (89%) Strand = Plus / Plus Query: 16 tctcttctcccgtcccggtggaagtcgtcgctgccgcagctggaccccgtcgacaggtcc 75 ||||| |||| || |||||||| |||||||||||||||||| ||| ||| |||||||||| Sbjct: 157 tctctgctccagtgccggtggaggtcgtcgctgccgcagctcgactccgccgacaggtcc 216 Query: 76 gacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcaccccgacg 135 || ||||| ||||||||||| ||||||||||||||||| || |||||||| || ||||| Sbjct: 217 gatgaggaaagcggcggcgaaatcgactgggacaacctggggttcgggctgacgccgacc 276 Query: 136 gactacatgtatgtcatgcggtgctcgcgggaggagggcggcttctcccgcggcgagctc 195 ||||||||||| |||||||||||||||| |||||| |||| ||||||||||||||||||| Sbjct: 277 gactacatgtacgtcatgcggtgctcgctggaggacggcgtcttctcccgcggcgagctc 336
>dbj|AK120579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135J09, full insert sequence Length = 1738 Score = 206 bits (104), Expect = 2e-50 Identities = 161/180 (89%) Strand = Plus / Plus Query: 16 tctcttctcccgtcccggtggaagtcgtcgctgccgcagctggaccccgtcgacaggtcc 75 ||||| |||| || |||||||| |||||||||||||||||| ||| ||| |||||||||| Sbjct: 277 tctctgctccagtgccggtggaggtcgtcgctgccgcagctcgactccgccgacaggtcc 336 Query: 76 gacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcaccccgacg 135 || ||||| ||||||||||| ||||||||||||||||| || |||||||| || ||||| Sbjct: 337 gatgaggaaagcggcggcgaaatcgactgggacaacctggggttcgggctgacgccgacc 396 Query: 136 gactacatgtatgtcatgcggtgctcgcgggaggagggcggcttctcccgcggcgagctc 195 ||||||||||| |||||||||||||||| |||||| |||| ||||||||||||||||||| Sbjct: 397 gactacatgtacgtcatgcggtgctcgctggaggacggcgtcttctcccgcggcgagctc 456
>dbj|AK105963.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E04, full insert sequence Length = 1577 Score = 206 bits (104), Expect = 2e-50 Identities = 161/180 (89%) Strand = Plus / Plus Query: 16 tctcttctcccgtcccggtggaagtcgtcgctgccgcagctggaccccgtcgacaggtcc 75 ||||| |||| || |||||||| |||||||||||||||||| ||| ||| |||||||||| Sbjct: 272 tctctgctccagtgccggtggaggtcgtcgctgccgcagctcgactccgccgacaggtcc 331 Query: 76 gacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcaccccgacg 135 || ||||| ||||||||||| ||||||||||||||||| || |||||||| || ||||| Sbjct: 332 gatgaggaaagcggcggcgaaatcgactgggacaacctggggttcgggctgacgccgacc 391 Query: 136 gactacatgtatgtcatgcggtgctcgcgggaggagggcggcttctcccgcggcgagctc 195 ||||||||||| |||||||||||||||| |||||| |||| ||||||||||||||||||| Sbjct: 392 gactacatgtacgtcatgcggtgctcgctggaggacggcgtcttctcccgcggcgagctc 451
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 157 bits (79), Expect = 2e-35 Identities = 115/127 (90%) Strand = Plus / Plus Query: 69 caggtccgacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcac 128 ||||||||| ||||| ||||||||||| ||||||||||||||||| || |||||||| || Sbjct: 6918259 caggtccgatgaggaaagcggcggcgaaatcgactgggacaacctggggttcgggctgac 6918318 Query: 129 cccgacggactacatgtatgtcatgcggtgctcgcgggaggagggcggcttctcccgcgg 188 ||||| ||||||||||| |||||||||||||||| |||||| |||| |||||||||||| Sbjct: 6918319 gccgaccgactacatgtacgtcatgcggtgctcgctggaggacggcgtcttctcccgcgg 6918378 Query: 189 cgagctc 195 ||||||| Sbjct: 6918379 cgagctc 6918385 Score = 60.0 bits (30), Expect = 3e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 16 tctcttctcccgtcccggtggaagtcgtcgctgccgcagctggaccccgtcgacaggt 73 ||||| |||| || |||||||| |||||||||||||||||| ||| ||| |||||||| Sbjct: 6918070 tctctgctccagtgccggtggaggtcgtcgctgccgcagctcgactccgccgacaggt 6918127
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 157 bits (79), Expect = 2e-35 Identities = 115/127 (90%) Strand = Plus / Plus Query: 69 caggtccgacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcac 128 ||||||||| ||||| ||||||||||| ||||||||||||||||| || |||||||| || Sbjct: 6916154 caggtccgatgaggaaagcggcggcgaaatcgactgggacaacctggggttcgggctgac 6916213 Query: 129 cccgacggactacatgtatgtcatgcggtgctcgcgggaggagggcggcttctcccgcgg 188 ||||| ||||||||||| |||||||||||||||| |||||| |||| |||||||||||| Sbjct: 6916214 gccgaccgactacatgtacgtcatgcggtgctcgctggaggacggcgtcttctcccgcgg 6916273 Query: 189 cgagctc 195 ||||||| Sbjct: 6916274 cgagctc 6916280 Score = 60.0 bits (30), Expect = 3e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 16 tctcttctcccgtcccggtggaagtcgtcgctgccgcagctggaccccgtcgacaggt 73 ||||| |||| || |||||||| |||||||||||||||||| ||| ||| |||||||| Sbjct: 6915965 tctctgctccagtgccggtggaggtcgtcgctgccgcagctcgactccgccgacaggt 6916022
>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12, complete sequence Length = 120392 Score = 157 bits (79), Expect = 2e-35 Identities = 115/127 (90%) Strand = Plus / Plus Query: 69 caggtccgacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcac 128 ||||||||| ||||| ||||||||||| ||||||||||||||||| || |||||||| || Sbjct: 114192 caggtccgatgaggaaagcggcggcgaaatcgactgggacaacctggggttcgggctgac 114251 Query: 129 cccgacggactacatgtatgtcatgcggtgctcgcgggaggagggcggcttctcccgcgg 188 ||||| ||||||||||| |||||||||||||||| |||||| |||| |||||||||||| Sbjct: 114252 gccgaccgactacatgtacgtcatgcggtgctcgctggaggacggcgtcttctcccgcgg 114311 Query: 189 cgagctc 195 ||||||| Sbjct: 114312 cgagctc 114318 Score = 60.0 bits (30), Expect = 3e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 16 tctcttctcccgtcccggtggaagtcgtcgctgccgcagctggaccccgtcgacaggt 73 ||||| |||| || |||||||| |||||||||||||||||| ||| ||| |||||||| Sbjct: 114003 tctctgctccagtgccggtggaggtcgtcgctgccgcagctcgactccgccgacaggt 114060
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11, complete sequence Length = 166072 Score = 157 bits (79), Expect = 2e-35 Identities = 115/127 (90%) Strand = Plus / Plus Query: 69 caggtccgacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcac 128 ||||||||| ||||| ||||||||||| ||||||||||||||||| || |||||||| || Sbjct: 84856 caggtccgatgaggaaagcggcggcgaaatcgactgggacaacctggggttcgggctgac 84915 Query: 129 cccgacggactacatgtatgtcatgcggtgctcgcgggaggagggcggcttctcccgcgg 188 ||||| ||||||||||| |||||||||||||||| |||||| |||| |||||||||||| Sbjct: 84916 gccgaccgactacatgtacgtcatgcggtgctcgctggaggacggcgtcttctcccgcgg 84975 Query: 189 cgagctc 195 ||||||| Sbjct: 84976 cgagctc 84982 Score = 60.0 bits (30), Expect = 3e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 16 tctcttctcccgtcccggtggaagtcgtcgctgccgcagctggaccccgtcgacaggt 73 ||||| |||| || |||||||| |||||||||||||||||| ||| ||| |||||||| Sbjct: 84667 tctctgctccagtgccggtggaggtcgtcgctgccgcagctcgactccgccgacaggt 84724
>ref|XM_550246.1| Oryza sativa (japonica cultivar-group), mRNA Length = 375 Score = 42.1 bits (21), Expect = 0.63 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 gacgaggagagcggcggcgacatcg 100 ||||||||||||||||||| ||||| Sbjct: 57 gacgaggagagcggcggcggcatcg 33
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 0.63 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 cgacatcgactgggacaacctcggc 117 |||||||||||||||||||| |||| Sbjct: 3850596 cgacatcgactgggacaaccccggc 3850572
>gb|DQ356948.1| Crocodilepox virus, complete genome Length = 190054 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cgctgccgcagctggaccccg 64 ||||||||||||||||||||| Sbjct: 34500 cgctgccgcagctggaccccg 34480
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 0.63 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 gacgaggagagcggcggcgacatcg 100 ||||||||||||||||||| ||||| Sbjct: 3371817 gacgaggagagcggcggcggcatcg 3371841
>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0701D05 Length = 172161 Score = 42.1 bits (21), Expect = 0.63 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 gacgaggagagcggcggcgacatcg 100 ||||||||||||||||||| ||||| Sbjct: 50187 gacgaggagagcggcggcggcatcg 50211
>gb|AE005046.1| Halobacterium sp. NRC-1 section 77 of 170 of the complete genome Length = 10159 Score = 42.1 bits (21), Expect = 0.63 Identities = 27/29 (93%) Strand = Plus / Plus Query: 89 gcggcgacatcgactgggacaacctcggc 117 |||||| ||||||||||| |||||||||| Sbjct: 5025 gcggcggcatcgactggggcaacctcggc 5053
>ref|XM_467388.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1822 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 ggcggcttctcccgcggcgagctc 195 ||||||| |||||||||||||||| Sbjct: 255 ggcggctactcccgcggcgagctc 278
>gb|AC093554.1| Leishmania donovani clone XX-BNI_Clos13.12, complete sequence Length = 33494 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ccgacgaggagagcggcggc 93 |||||||||||||||||||| Sbjct: 5007 ccgacgaggagagcggcggc 5026
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 ggcggcttctcccgcggcgagctc 195 ||||||| |||||||||||||||| Sbjct: 110195 ggcggctactcccgcggcgagctc 110218
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 ggcggcttctcccgcggcgagctc 195 ||||||| |||||||||||||||| Sbjct: 29252436 ggcggctactcccgcggcgagctc 29252413
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 ggcggcttctcccgcggcgagctc 195 ||||||| |||||||||||||||| Sbjct: 49781 ggcggctactcccgcggcgagctc 49758
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 ggcggcttctcccgcggcgagctc 195 ||||||| |||||||||||||||| Sbjct: 142404 ggcggctactcccgcggcgagctc 142381
>dbj|AK065585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M23, full insert sequence Length = 1821 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 ggcggcttctcccgcggcgagctc 195 ||||||| |||||||||||||||| Sbjct: 254 ggcggctactcccgcggcgagctc 277
>gb|AY632421.1| Streptomyces viridochromogenes PTT biosynthetic gene Length = 40241 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 79 gaggagagcggcggcgaca 97 ||||||||||||||||||| Sbjct: 2169 gaggagagcggcggcgaca 2187
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 171 gggcggcttctcccgcggc 189 ||||||||||||||||||| Sbjct: 2960580 gggcggcttctcccgcggc 2960598
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0056I11, complete sequence Length = 145796 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 79 gaggagagcggcggcgaca 97 ||||||||||||||||||| Sbjct: 60033 gaggagagcggcggcgaca 60015
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 107 acaacctcggcttcgggctcacc 129 ||||| ||||||||||||||||| Sbjct: 1752393 acaacatcggcttcgggctcacc 1752371
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 75 cgacgaggagagcggcggcgaca 97 ||||||||||| ||||||||||| Sbjct: 3439842 cgacgaggagatcggcggcgaca 3439820
>ref|XM_753837.1| Ustilago maydis 521 hypothetical protein (UM02783.1) partial mRNA Length = 1197 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 98 tcgactgggacaacctcggcttc 120 ||||||||||||| ||||||||| Sbjct: 50 tcgactgggacaagctcggcttc 72
>emb|X65195.2|SVPTT Streptomyces viridochromogenes strain Tue494 phosphinothricin tripeptide biosynthetic gene cluster: ORFB1, ORFB2, ORF1, phsB gene, ORFM, phsC gene, pmi gene, adhP gene, ORF3, pgdP gene, ppm gene, ppd gene, ORFx, pgmP gene, cpps gene, cppm gene, aldP gene, pmet gene, pms gene, phsA gene, pat gene, dea gene, the1 gene, the2 gene, trs gene, prpA gene, ORFE1, ORFE2 and ORFE3 (partial) Length = 37823 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 79 gaggagagcggcggcgaca 97 ||||||||||||||||||| Sbjct: 3785 gaggagagcggcggcgaca 3803
>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13 Length = 347496 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 107 acaacctcggcttcgggctcacc 129 ||||| ||||||||||||||||| Sbjct: 20983 acaacatcggcttcgggctcacc 20961
>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14 Length = 300050 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 107 acaacctcggcttcgggctcacc 129 ||||| ||||||||||||||||| Sbjct: 122253 acaacatcggcttcgggctcacc 122231
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 165 ggaggagggcggcttctcc 183 ||||||||||||||||||| Sbjct: 241088 ggaggagggcggcttctcc 241106 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 165 ggaggagggcggcttctcc 183 ||||||||||||||||||| Sbjct: 239768 ggaggagggcggcttctcc 239786
>gb|AE005722.1| Caulobacter crescentus CB15 section 48 of 359 of the complete genome Length = 12112 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 tccgacgaggagagcggcg 91 ||||||||||||||||||| Sbjct: 7874 tccgacgaggagagcggcg 7892
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0061K21 From Chromosome 10, complete sequence Length = 112721 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ggcggcttctcccgcggcg 190 ||||||||||||||||||| Sbjct: 16886 ggcggcttctcccgcggcg 16868
>gb|AC105001.3| Homo sapiens chromosome 8, clone CTD-2135J3, complete sequence Length = 157442 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 164 gggaggagggcggcttctc 182 ||||||||||||||||||| Sbjct: 58199 gggaggagggcggcttctc 58181
>gb|AF193846.1|AF193846 Solanum tuberosum branched-chain amino acid aminotransferase (BCAT2) mRNA, complete cds Length = 1700 Score = 38.2 bits (19), Expect = 9.8 Identities = 25/27 (92%) Strand = Plus / Plus Query: 93 cgacatcgactgggacaacctcggctt 119 ||||||||| ||||||||||| ||||| Sbjct: 465 cgacatcgattgggacaaccttggctt 491
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ggcggcttctcccgcggcg 190 ||||||||||||||||||| Sbjct: 14077248 ggcggcttctcccgcggcg 14077230
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 79 gaggagagcggcggcgaca 97 ||||||||||||||||||| Sbjct: 1607873 gaggagagcggcggcgaca 1607855
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 gagcggcggcgacatcgac 102 ||||||||||||||||||| Sbjct: 4685407 gagcggcggcgacatcgac 4685425
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 78 cgaggagagcggcggcgacatcg 100 ||||||||||||||||| ||||| Sbjct: 3745421 cgaggagagcggcggcggcatcg 3745399
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 94 gacatcgactgggacaacc 112 ||||||||||||||||||| Sbjct: 1583549 gacatcgactgggacaacc 1583567
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ggcggcttctcccgcggcg 190 ||||||||||||||||||| Sbjct: 93377 ggcggcttctcccgcggcg 93359
>dbj|AK108683.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-B10, full insert sequence Length = 1528 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 79 gaggagagcggcggcgaca 97 ||||||||||||||||||| Sbjct: 643 gaggagagcggcggcgaca 661
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 90 cggcgacatcgactgggac 108 ||||||||||||||||||| Sbjct: 1593400 cggcgacatcgactgggac 1593382
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 catcgactgggacaacctc 114 ||||||||||||||||||| Sbjct: 1166188 catcgactgggacaacctc 1166170
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 121 gggctcaccccgacggact 139 ||||||||||||||||||| Sbjct: 1970395 gggctcaccccgacggact 1970413
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 cggcgacatcgactgggac 108 ||||||||||||||||||| Sbjct: 602207 cggcgacatcgactgggac 602225
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 ggcggcttctcccgcggcg 190 ||||||||||||||||||| Sbjct: 14085490 ggcggcttctcccgcggcg 14085472 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,106,777 Number of Sequences: 3902068 Number of extensions: 1106777 Number of successful extensions: 82211 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80076 Number of HSP's gapped (non-prelim): 2135 length of query: 197 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 175 effective length of database: 17,147,199,772 effective search space: 3000759960100 effective search space used: 3000759960100 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
