ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast71a06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK063483.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 4e-35
2gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome... 133 6e-28
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 133 6e-28
5emb|AL672232.23| Mouse DNA sequence from clone RP23-367M14 on ch... 46 0.10
6gb|BT020476.1| Arabidopsis thaliana At5g49800 gene, complete cds 44 0.41
7ref|NM_124358.2| Arabidopsis thaliana unknown protein AT5G49800 ... 44 0.41
8ref|XM_462986.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.41
9ref|XM_477378.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.41
10gb|AE008926.1| Agrobacterium tumefaciens str. C58 AT plasmid sec... 44 0.41
11gb|AE007873.1| Agrobacterium tumefaciens str. C58 plasmid AT, se... 44 0.41
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.41
13gb|AC093312.7| Oryza sativa chromosome 3 BAC OSJNBa0095N06 genom... 44 0.41
14dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
16gb|AF151698.2| Agrobacterium tumefaciens cryptic plasmid pAtC58 ... 44 0.41
17dbj|AP005201.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
18dbj|AB025612.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.41
19ref|NM_104384.3| Arabidopsis thaliana nucleic acid binding / tra... 42 1.6
20ref|XM_481472.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
21ref|XM_470282.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
22gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
23gb|AY360389.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
24gb|AY150421.1| Arabidopsis thaliana putative zinc finger protein... 42 1.6
25gb|AY090998.1| Arabidopsis thaliana putative zinc finger protein... 42 1.6
26gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 geno... 42 1.6
27ref|NM_058025.3| Drosophila melanogaster uninitiated CG4008-RA (... 42 1.6
28gb|AY047525.1| Drosophila melanogaster GH03119 full length cDNA 42 1.6
29dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
30dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
31dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
32gb|AC007291.24|AC007291 Drosophila melanogaster, chromosome 2L, ... 42 1.6
33gb|AC073944.6|AC073944 Arabidopsis thaliana chromosome 1 BAC T7N... 42 1.6
34gb|AY162276.1| Chromobacterium violaceum chitinase gene, complet... 42 1.6
35dbj|AP005852.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
36dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
37dbj|AP005693.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
38dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
39dbj|AK121575.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
40gb|AF049912.1|AF049912 Drosophila melanogaster methionine aminop... 42 1.6
41gb|AE003626.4| Drosophila melanogaster chromosome 2L, section 35... 42 1.6
42dbj|AP001582.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.6
43gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
44emb|CR450261.1| Oryza sativa chromosome 12, . Partial sequence f... 42 1.6
45gb|AC149347.2| Phakopsora pachyrhizi clone JGIAFNA-33E15, comple... 40 6.3
46ref|XM_465827.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
47ref|NM_189191.1| Oryza sativa (japonica cultivar-group), predic... 40 6.3
48gb|AC137110.11| Mus musculus chromosome 7, clone RP23-399P8, com... 40 6.3
49gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC cl... 40 6.3
50gb|AF247675.1| Gallus gallus bHLH transcription factor neuroAB m... 40 6.3
51ref|XM_422446.1| PREDICTED: Gallus gallus similar to putative re... 40 6.3
52ref|XM_611147.2| PREDICTED: Bos taurus similar to protein phosph... 40 6.3
53ref|NM_204504.2| Gallus gallus basic helix-loop-helix domain con... 40 6.3
54gb|BC046601.1| Mus musculus myristoylated alanine rich protein k... 40 6.3
55ref|NM_008538.1| Mus musculus myristoylated alanine rich protein... 40 6.3
56gb|AC158215.3| Mus musculus chromosome 7, clone RP24-180E12, com... 40 6.3
57gb|AC115940.11| Mus musculus chromosome 5, clone RP24-553D12, co... 40 6.3
58emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 6.3
59gb|AC022616.9| Homo sapiens chromosome 8, clone RP11-726G23, com... 40 6.3
60gb|AC127275.4| Mus musculus BAC clone RP24-207I8 from chromosome... 40 6.3
61gb|AC007035.3| Homo sapiens BAC clone RP11-104I19 from 7, comple... 40 6.3
62emb|AL159171.15| Human DNA sequence from clone RP11-280G19 on ch... 40 6.3
63emb|AL109615.42|HS1120P11 Human DNA sequence from clone RP5-1120... 40 6.3
64emb|AL021453.1|HS821D11 Human DNA sequence from clone RP5-821D11... 40 6.3
65gb|AF525024.1| Hordeum vulgare subsp. vulgare HGA6 (HGA6) gene, ... 40 6.3
66gb|AC156039.4| Mus musculus BAC clone RP23-24C2 from chromosome ... 40 6.3
67emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 40 6.3
68emb|AJ720847.1| Gallus gallus mRNA for hypothetical protein, clo... 40 6.3
69dbj|AK124515.1| Homo sapiens cDNA FLJ42524 fis, clone BRACE3001384 40 6.3
70dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
71dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
72emb|BX833837.1|CNS0A0DT Arabidopsis thaliana Full-length cDNA Co... 40 6.3
73dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
74dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
75dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
76dbj|AP005630.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
77emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.3
78gb|AC133944.4| Mus musculus BAC clone RP24-113L10 from 10, compl... 40 6.3
79gb|U92461.1|GGU92461 Gallus gallus putative recombination factor... 40 6.3
80gb|AY830526.1| Threnetes leucurus NADH dehydrogenase subunit 2 (... 40 6.3
81gb|M60474.1|MUSMARCKS Mouse myristoylated alanine-rich C-kinase ... 40 6.3
82dbj|AB015999.1| Ipomoea nil Pkn1 (knotted-like gene) mRNA, compl... 40 6.3 
>dbj|AK063483.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-B12, full
           insert sequence
          Length = 1269

 Score =  157 bits (79), Expect = 4e-35
 Identities = 118/131 (90%)
 Strand = Plus / Plus

                                                                       
Query: 173 tccccttcggtctgctcgaggtcatggtccataagtgaggattctttgaggaggtacgtg 232
           |||||||| |||||||| || |||||||| |||||||||||||| |||| ||||||||||
Sbjct: 245 tccccttctgtctgctccagatcatggtctataagtgaggattcgttgaagaggtacgtg 304

                                                                       
Query: 233 agctacgctagcgagagctgcatccaggagctgctcgcggcgtcggactcgggcggcgcc 292
           |||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||| |
Sbjct: 305 agctacgcgagcgagagctgcatccaggagctcctcgccgcgtcggactccggcggcggc 364

                      
Query: 293 ggacgcggcgg 303
           ||  |||||||
Sbjct: 365 ggcggcggcgg 375



 Score =  133 bits (67), Expect = 6e-28
 Identities = 111/125 (88%), Gaps = 1/125 (0%)
 Strand = Plus / Plus

                                                                       
Query: 347 gcgtactgcaacggcgtggagatagcgaagcggcggtcggngacggngcagatgttccgg 406
           |||||||||||||||||||||||| ||||||||||| | | | ||| |||  | ||||||
Sbjct: 398 gcgtactgcaacggcgtggagatatcgaagcggcgggccggggcggcgcacgtcttccgg 457

                                                                       
Query: 407 agccggtggctgctctacgccgtctcgccggagcagttcatggccgtcgcc-acgccgtc 465
           ||||||||||||||  ||||||||||||||| | ||||||||||||||||| ||||||||
Sbjct: 458 agccggtggctgctgcacgccgtctcgccggggaagttcatggccgtcgccaacgccgtc 517

                
Query: 466 gacgc 470
           |||||
Sbjct: 518 gacgc 522
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>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0004P24, complete sequence
          Length = 137721

 Score =  133 bits (67), Expect = 6e-28
 Identities = 111/125 (88%), Gaps = 1/125 (0%)
 Strand = Plus / Plus

                                                                         
Query: 347   gcgtactgcaacggcgtggagatagcgaagcggcggtcggngacggngcagatgttccgg 406
             |||||||||||||||||||||||| ||||||||||| | | | ||| |||  | ||||||
Sbjct: 74337 gcgtactgcaacggcgtggagatatcgaagcggcgggccggggcggcgcacgtcttccgg 74396

                                                                         
Query: 407   agccggtggctgctctacgccgtctcgccggagcagttcatggccgtcgcc-acgccgtc 465
             ||||||||||||||  ||||||||||||||| | ||||||||||||||||| ||||||||
Sbjct: 74397 agccggtggctgctgcacgccgtctcgccggggaagttcatggccgtcgccaacgccgtc 74456

                  
Query: 466   gacgc 470
             |||||
Sbjct: 74457 gacgc 74461



 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                         
Query: 198   ggtccataagtgaggattctttgaggaggtacgtgagctacgctagcgagagctgcatcc 257
             |||| |||||||||||||| |||| |||||||||||||||||| ||||||||||||||||
Sbjct: 74209 ggtctataagtgaggattcgttgaagaggtacgtgagctacgcgagcgagagctgcatcc 74268

                                                           
Query: 258   aggagctgctcgcggcgtcggactcgggcggcgccggacgcggcgg 303
             ||||||| ||||| ||||||||||| ||||||| |||  |||||||
Sbjct: 74269 aggagctcctcgccgcgtcggactccggcggcggcggcggcggcgg 74314
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  133 bits (67), Expect = 6e-28
 Identities = 111/125 (88%), Gaps = 1/125 (0%)
 Strand = Plus / Minus

                                                                           
Query: 347     gcgtactgcaacggcgtggagatagcgaagcggcggtcggngacggngcagatgttccgg 406
               |||||||||||||||||||||||| ||||||||||| | | | ||| |||  | ||||||
Sbjct: 7742618 gcgtactgcaacggcgtggagatatcgaagcggcgggccggggcggcgcacgtcttccgg 7742559

                                                                           
Query: 407     agccggtggctgctctacgccgtctcgccggagcagttcatggccgtcgcc-acgccgtc 465
               ||||||||||||||  ||||||||||||||| | ||||||||||||||||| ||||||||
Sbjct: 7742558 agccggtggctgctgcacgccgtctcgccggggaagttcatggccgtcgccaacgccgtc 7742499

                    
Query: 466     gacgc 470
               |||||
Sbjct: 7742498 gacgc 7742494



 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                           
Query: 198     ggtccataagtgaggattctttgaggaggtacgtgagctacgctagcgagagctgcatcc 257
               |||| |||||||||||||| |||| |||||||||||||||||| ||||||||||||||||
Sbjct: 7742746 ggtctataagtgaggattcgttgaagaggtacgtgagctacgcgagcgagagctgcatcc 7742687

                                                             
Query: 258     aggagctgctcgcggcgtcggactcgggcggcgccggacgcggcgg 303
               ||||||| ||||| ||||||||||| ||||||| |||  |||||||
Sbjct: 7742686 aggagctcctcgccgcgtcggactccggcggcggcggcggcggcgg 7742641
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  133 bits (67), Expect = 6e-28
 Identities = 111/125 (88%), Gaps = 1/125 (0%)
 Strand = Plus / Minus

                                                                           
Query: 347     gcgtactgcaacggcgtggagatagcgaagcggcggtcggngacggngcagatgttccgg 406
               |||||||||||||||||||||||| ||||||||||| | | | ||| |||  | ||||||
Sbjct: 7812705 gcgtactgcaacggcgtggagatatcgaagcggcgggccggggcggcgcacgtcttccgg 7812646

                                                                           
Query: 407     agccggtggctgctctacgccgtctcgccggagcagttcatggccgtcgcc-acgccgtc 465
               ||||||||||||||  ||||||||||||||| | ||||||||||||||||| ||||||||
Sbjct: 7812645 agccggtggctgctgcacgccgtctcgccggggaagttcatggccgtcgccaacgccgtc 7812586

                    
Query: 466     gacgc 470
               |||||
Sbjct: 7812585 gacgc 7812581



 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                           
Query: 198     ggtccataagtgaggattctttgaggaggtacgtgagctacgctagcgagagctgcatcc 257
               |||| |||||||||||||| |||| |||||||||||||||||| ||||||||||||||||
Sbjct: 7812833 ggtctataagtgaggattcgttgaagaggtacgtgagctacgcgagcgagagctgcatcc 7812774

                                                             
Query: 258     aggagctgctcgcggcgtcggactcgggcggcgccggacgcggcgg 303
               ||||||| ||||| ||||||||||| ||||||| |||  |||||||
Sbjct: 7812773 aggagctcctcgccgcgtcggactccggcggcggcggcggcggcgg 7812728
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>emb|AL672232.23| Mouse DNA sequence from clone RP23-367M14 on chromosome X, complete
              sequence
          Length = 202689

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 158    tcccccacatcttcctccccttc 180
              |||||||||||||||||||||||
Sbjct: 120747 tcccccacatcttcctccccttc 120769
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>gb|BT020476.1| Arabidopsis thaliana At5g49800 gene, complete cds
          Length = 829

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 219 tgaggaggtacgtgagctacgctagcgagagctgcatccaggagct 264
           |||| ||||||||||| | ||| || |||||||||||||| |||||
Sbjct: 55  tgagaaggtacgtgaggttcgcgagtgagagctgcatccaagagct 100
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>ref|NM_124358.2| Arabidopsis thaliana unknown protein AT5G49800 mRNA, complete cds
          Length = 907

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 219 tgaggaggtacgtgagctacgctagcgagagctgcatccaggagct 264
           |||| ||||||||||| | ||| || |||||||||||||| |||||
Sbjct: 102 tgagaaggtacgtgaggttcgcgagtgagagctgcatccaagagct 147
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>ref|XM_462986.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 363

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 297 gcggcgggggagaaggcggcgacgaggaggacgg 330
           ||||||| ||||| ||||||| ||||||||||||
Sbjct: 244 gcggcggtggagagggcggcggcgaggaggacgg 277
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>ref|XM_477378.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 555

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 297 gcggcgggggagaaggcggcgacgaggaggacgg 330
           ||||||| ||||| ||||||| ||||||||||||
Sbjct: 206 gcggcggtggagagggcggcggcgaggaggacgg 173
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>gb|AE008926.1| Agrobacterium tumefaciens str. C58 AT plasmid section 1 of 49 of the
            complete sequence
          Length = 10385

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 293  ggacgcggcgggggagaaggcggcga 318
            ||||||||||| ||||||||||||||
Sbjct: 9303 ggacgcggcggcggagaaggcggcga 9328
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>gb|AE007873.1| Agrobacterium tumefaciens str. C58 plasmid AT, section 1 of 50 of the
            complete sequence
          Length = 10692

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 293  ggacgcggcgggggagaaggcggcga 318
            ||||||||||| ||||||||||||||
Sbjct: 9610 ggacgcggcggcggagaaggcggcga 9635
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 297      gcggcgggggagaaggcggcgacgaggaggacgg 330
                ||||||| ||||| ||||||| ||||||||||||
Sbjct: 20669812 gcggcggtggagagggcggcggcgaggaggacgg 20669779



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 283     gggcggcgccggacgcggcgggggagaaggcgg 315
               ||||||||  |||||||||| ||||||||||||
Sbjct: 3660553 gggcggcgaaggacgcggcgcgggagaaggcgg 3660521
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>gb|AC093312.7| Oryza sativa chromosome 3 BAC OSJNBa0095N06 genomic sequence, complete
             sequence
          Length = 152417

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 297   gcggcgggggagaaggcggcgacgaggaggacgg 330
             ||||||| ||||| ||||||| ||||||||||||
Sbjct: 83569 gcggcggtggagagggcggcggcgaggaggacgg 83536
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 297     gcggcgggggagaaggcggcgacgaggaggacgg 330
               ||||||| ||||| ||||||| ||||||||||||
Sbjct: 9964808 gcggcggtggagagggcggcggcgaggaggacgg 9964841



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 313     cggcgacgaggaggacggcgg 333
               |||||||||||||||||||||
Sbjct: 9584820 cggcgacgaggaggacggcgg 9584840



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 423      acgccgtctcgccggagcag 442
                ||||||||||||||||||||
Sbjct: 25220369 acgccgtctcgccggagcag 25220350
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 297      gcggcgggggagaaggcggcgacgaggaggacgg 330
                ||||||| ||||| ||||||| ||||||||||||
Sbjct: 20662841 gcggcggtggagagggcggcggcgaggaggacgg 20662808



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 283     gggcggcgccggacgcggcgggggagaaggcgg 315
               ||||||||  |||||||||| ||||||||||||
Sbjct: 3660664 gggcggcgaaggacgcggcgcgggagaaggcgg 3660632
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>gb|AF151698.2| Agrobacterium tumefaciens cryptic plasmid pAtC58 transcriptional
            repressor, GlnH-like protein, GlnP/GlnQ-like protein,
            putative oxidoreductase, and AgaE-like protein genes,
            complete cds
          Length = 6178

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 293  ggacgcggcgggggagaaggcggcga 318
            ||||||||||| ||||||||||||||
Sbjct: 1010 ggacgcggcggcggagaaggcggcga 985
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>dbj|AP005201.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0685B06
          Length = 140293

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 297   gcggcgggggagaaggcggcgacgaggaggacgg 330
             ||||||| ||||| ||||||| ||||||||||||
Sbjct: 94340 gcggcggtggagagggcggcggcgaggaggacgg 94373
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>dbj|AB025612.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21G20
          Length = 35238

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 219  tgaggaggtacgtgagctacgctagcgagagctgcatccaggagct 264
            |||| ||||||||||| | ||| || |||||||||||||| |||||
Sbjct: 1208 tgagaaggtacgtgaggttcgcgagtgagagctgcatccaagagct 1163
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>ref|NM_104384.3| Arabidopsis thaliana nucleic acid binding / transcription factor/
           zinc ion binding AT1G55110 mRNA, complete cds
          Length = 1580

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 63  tttctcttcctcatctcaaaacatcatca 91
           ||||||||| ||||| |||||||||||||
Sbjct: 846 tttctcttcgtcatcccaaaacatcatca 874
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>ref|XM_481472.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3024

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 305 ggagaaggcggcgacgaggaggacg 329
           ||||||||||| |||||||||||||
Sbjct: 108 ggagaaggcggagacgaggaggacg 84
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>ref|XM_470282.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1203

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 283 gggcggcgccggacgcggcgggggagaaggcgg 315
           ||||||||  |||||||||| ||||||||||||
Sbjct: 866 gggcggcgaaggacgcggcgcgggagaaggcgg 898
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>gb|AY360390.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0074N12,
              complete sequence
          Length = 187972

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 305    ggagaaggcggcgacgaggaggacg 329
              ||||||||||| |||||||||||||
Sbjct: 172717 ggagaaggcggagacgaggaggacg 172693
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>gb|AY360389.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0024A05,
             complete sequence
          Length = 82985

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 305   ggagaaggcggcgacgaggaggacg 329
             ||||||||||| |||||||||||||
Sbjct: 78152 ggagaaggcggagacgaggaggacg 78176
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>gb|AY150421.1| Arabidopsis thaliana putative zinc finger protein (At1g55110) mRNA,
           complete cds
          Length = 1399

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 63  tttctcttcctcatctcaaaacatcatca 91
           ||||||||| ||||| |||||||||||||
Sbjct: 756 tttctcttcgtcatcccaaaacatcatca 784
to top
>gb|AY090998.1| Arabidopsis thaliana putative zinc finger protein (At1g55110) mRNA,
           complete cds
          Length = 1596

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 63  tttctcttcctcatctcaaaacatcatca 91
           ||||||||| ||||| |||||||||||||
Sbjct: 846 tttctcttcgtcatcccaaaacatcatca 874
to top
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete
              sequence
          Length = 160738

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 283    gggcggcgccggacgcggcgggggagaaggcgg 315
              ||||||||  |||||||||| ||||||||||||
Sbjct: 120824 gggcggcgaaggacgcggcgcgggagaaggcgg 120856
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>ref|NM_058025.3| Drosophila melanogaster uninitiated CG4008-RA (und), mRNA
          Length = 1792

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 305 ggagaaggcggcgacgaggag 325
           |||||||||||||||||||||
Sbjct: 414 ggagaaggcggcgacgaggag 434
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>gb|AY047525.1| Drosophila melanogaster GH03119 full length cDNA
          Length = 1643

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 305 ggagaaggcggcgacgaggag 325
           |||||||||||||||||||||
Sbjct: 267 ggagaaggcggcgacgaggag 287
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 313      cggcgacgaggaggacggcgg 333
                |||||||||||||||||||||
Sbjct: 11538900 cggcgacgaggaggacggcgg 11538880



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 311      ggcggcgacgaggaggacgg 330
                ||||||||||||||||||||
Sbjct: 25267602 ggcggcgacgaggaggacgg 25267621
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 305      ggagaaggcggcgacgaggaggacg 329
                ||||||||||| |||||||||||||
Sbjct: 12835538 ggagaaggcggagacgaggaggacg 12835514
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 313      cggcgacgaggaggacggcgg 333
                |||||||||||||||||||||
Sbjct: 11642633 cggcgacgaggaggacggcgg 11642653
to top
>gb|AC007291.24|AC007291 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone
             BACR02I05, complete sequence
          Length = 176075

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 305   ggagaaggcggcgacgaggag 325
             |||||||||||||||||||||
Sbjct: 56405 ggagaaggcggcgacgaggag 56385
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>gb|AC073944.6|AC073944 Arabidopsis thaliana chromosome 1 BAC T7N22 genomic sequence, complete
             sequence
          Length = 44540

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 63    tttctcttcctcatctcaaaacatcatca 91
             ||||||||| ||||| |||||||||||||
Sbjct: 20956 tttctcttcgtcatcccaaaacatcatca 20928
to top
>gb|AY162276.1| Chromobacterium violaceum chitinase gene, complete cds
          Length = 3458

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 283 gggcggcgccggacgcggcgg 303
           |||||||||||||||||||||
Sbjct: 480 gggcggcgccggacgcggcgg 500
to top
>dbj|AP005852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0414E10
          Length = 141760

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 313    cggcgacgaggaggacggcgg 333
              |||||||||||||||||||||
Sbjct: 120519 cggcgacgaggaggacggcgg 120539
to top
>dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1059D01
          Length = 158792

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 313   cggcgacgaggaggacggcgg 333
             |||||||||||||||||||||
Sbjct: 92550 cggcgacgaggaggacggcgg 92570
to top
>dbj|AP005693.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0061E21
          Length = 155085

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 305   ggagaaggcggcgacgaggaggacg 329
             ||||||||||| |||||||||||||
Sbjct: 36056 ggagaaggcggagacgaggaggacg 36032
to top
>dbj|AP005166.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0058D03
          Length = 184235

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 305    ggagaaggcggcgacgaggaggacg 329
              ||||||||||| |||||||||||||
Sbjct: 179533 ggagaaggcggagacgaggaggacg 179509
to top
>dbj|AK121575.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033036H02, full
           insert sequence
          Length = 1540

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 283 gggcggcgccggacgcggcgggggagaaggcgg 315
           ||||||||  |||||||||| ||||||||||||
Sbjct: 955 gggcggcgaaggacgcggcgcgggagaaggcgg 987
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>gb|AF049912.1|AF049912 Drosophila melanogaster methionine aminopeptidase (DMAP2) mRNA,
           complete cds
          Length = 1562

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 305 ggagaaggcggcgacgaggag 325
           |||||||||||||||||||||
Sbjct: 184 ggagaaggcggcgacgaggag 204
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>gb|AE003626.4| Drosophila melanogaster chromosome 2L, section 35 of 83 of the complete
             sequence
          Length = 264919

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 305   ggagaaggcggcgacgaggag 325
             |||||||||||||||||||||
Sbjct: 54998 ggagaaggcggcgacgaggag 55018
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>dbj|AP001582.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-215H18, complete
             sequence
          Length = 90256

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    tccatttctcttcctcatctc 79
             |||||||||||||||||||||
Sbjct: 16412 tccatttctcttcctcatctc 16432
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 313      cggcgacgaggaggacggcgg 333
                |||||||||||||||||||||
Sbjct: 11538571 cggcgacgaggaggacggcgg 11538551



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 311      ggcggcgacgaggaggacgg 330
                ||||||||||||||||||||
Sbjct: 25195778 ggcggcgacgaggaggacgg 25195797
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>emb|CR450261.1| Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0013J10
            of library OSJNBa from chromosome 12 of cultivar
            Nipponbare of ssp. japonica of Oryza sativa (rice),
            complete sequence
          Length = 16142

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 313  cggcgacgaggaggacggcgg 333
            |||||||||||||||||||||
Sbjct: 2781 cggcgacgaggaggacggcgg 2761
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>gb|AC149347.2| Phakopsora pachyrhizi clone JGIAFNA-33E15, complete sequence
          Length = 44825

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    ccatttctcttcctcatctc 79
             ||||||||||||||||||||
Sbjct: 38945 ccatttctcttcctcatctc 38964



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    ccatttctcttcctcatctc 79
             ||||||||||||||||||||
Sbjct: 37405 ccatttctcttcctcatctc 37424
to top
>ref|XM_465827.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 375

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 299 ggcgggggagaaggcggcga 318
           ||||||||||||||||||||
Sbjct: 347 ggcgggggagaaggcggcga 366
to top
>ref|NM_189191.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3582

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 295 acgcggcgggggagaaggcggcga 318
           ||||||||| ||||||||||||||
Sbjct: 58  acgcggcggcggagaaggcggcga 35
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>gb|AC137110.11| Mus musculus chromosome 7, clone RP23-399P8, complete sequence
          Length = 199827

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   cccacatcttcctccccttc 180
             ||||||||||||||||||||
Sbjct: 81605 cccacatcttcctccccttc 81624
to top
>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete
             sequence
          Length = 113510

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   gcggcgacgaggaggacggc 331
             ||||||||||||||||||||
Sbjct: 76755 gcggcgacgaggaggacggc 76736
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>gb|AF247675.1| Gallus gallus bHLH transcription factor neuroAB mRNA, complete cds
          Length = 1575

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 gcggcgacgaggaggacggc 331
           ||||||||||||||||||||
Sbjct: 245 gcggcgacgaggaggacggc 264
to top
>ref|XM_422446.1| PREDICTED: Gallus gallus similar to putative recombination factor
           GdRad54 (LOC424610), mRNA
          Length = 1572

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 311 ggcggcgacgaggaggacggcgggtggc 338
           |||||||| ||||||||||||| |||||
Sbjct: 232 ggcggcgaggaggaggacggcgagtggc 259
to top
>ref|XM_611147.2| PREDICTED: Bos taurus similar to protein phosphatase 1, regulatory
           subunit 15B (LOC538754), mRNA
          Length = 5181

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 248 agctgcatccaggagctgct 267
           ||||||||||||||||||||
Sbjct: 602 agctgcatccaggagctgct 583
to top
>ref|NM_204504.2| Gallus gallus basic helix-loop-helix domain containing, class B, 4
           (BHLHB4), mRNA
          Length = 4093

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 gcggcgacgaggaggacggc 331
           ||||||||||||||||||||
Sbjct: 255 gcggcgacgaggaggacggc 274
to top
>gb|BC046601.1| Mus musculus myristoylated alanine rich protein kinase C substrate,
            mRNA (cDNA clone MGC:54746 IMAGE:6311439), complete cds
          Length = 2591

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 292  cggacgcggcgggggagaaggcgg 315
            |||| |||||||||||||||||||
Sbjct: 1089 cggaggcggcgggggagaaggcgg 1112
to top
>ref|NM_008538.1| Mus musculus myristoylated alanine rich protein kinase C substrate
            (Marcks), mRNA
          Length = 2597

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 292  cggacgcggcgggggagaaggcgg 315
            |||| |||||||||||||||||||
Sbjct: 1117 cggaggcggcgggggagaaggcgg 1140
to top
>gb|AC158215.3| Mus musculus chromosome 7, clone RP24-180E12, complete sequence
          Length = 156342

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    cccacatcttcctccccttc 180
              ||||||||||||||||||||
Sbjct: 129918 cccacatcttcctccccttc 129937
to top
>gb|AC115940.11| Mus musculus chromosome 5, clone RP24-553D12, complete sequence
          Length = 189685

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 87    catcatcctaggcacaagcacaaa 110
             |||||||||||| |||||||||||
Sbjct: 36283 catcatcctaggtacaagcacaaa 36260
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    gcggcgggggagaaggcggc 316
              ||||||||||||||||||||
Sbjct: 510144 gcggcgggggagaaggcggc 510163
to top
>gb|AC022616.9| Homo sapiens chromosome 8, clone RP11-726G23, complete sequence
          Length = 191821

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   gaggaggacggcgggtggca 339
             ||||||||||||||||||||
Sbjct: 55336 gaggaggacggcgggtggca 55355
to top
>gb|AC127275.4| Mus musculus BAC clone RP24-207I8 from chromosome 5, complete sequence
          Length = 180919

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 87     catcatcctaggcacaagcacaaa 110
              |||||||||||| |||||||||||
Sbjct: 111217 catcatcctaggtacaagcacaaa 111194
to top
>gb|AC007035.3| Homo sapiens BAC clone RP11-104I19 from 7, complete sequence
          Length = 180397

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    atacctgcccatccatttct 67
             ||||||||||||||||||||
Sbjct: 64684 atacctgcccatccatttct 64665
to top
>emb|AL159171.15| Human DNA sequence from clone RP11-280G19 on chromosome 10 Contains a
             novel pseudogene (HSPC031) and a thyroid autoantigen 70kDa
             (Ku antigen)(G22P1) pseudogene, complete sequence
          Length = 168145

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    catctcaaaacatcatcatc 93
             ||||||||||||||||||||
Sbjct: 20861 catctcaaaacatcatcatc 20842
to top
>emb|AL109615.42|HS1120P11 Human DNA sequence from clone RP5-1120P11 on chromosome 6p12.3-21.2,
             complete sequence
          Length = 146655

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   gcggcgggggagaaggcggc 316
             ||||||||||||||||||||
Sbjct: 27203 gcggcgggggagaaggcggc 27184
to top
>emb|AL021453.1|HS821D11 Human DNA sequence from clone RP5-821D11 on chromosome 22q12.3-13.1,
             complete sequence
          Length = 76727

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   cccacatcttcctccccttc 180
             ||||||||||||||||||||
Sbjct: 49063 cccacatcttcctccccttc 49082
to top
>gb|AF525024.1| Hordeum vulgare subsp. vulgare HGA6 (HGA6) gene, complete cds
          Length = 2692

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 310  aggcggcgacgaggaggacg 329
            ||||||||||||||||||||
Sbjct: 1777 aggcggcgacgaggaggacg 1758
to top
>gb|AC156039.4| Mus musculus BAC clone RP23-24C2 from chromosome 10, complete sequence
          Length = 206634

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 292    cggacgcggcgggggagaaggcgg 315
              |||| |||||||||||||||||||
Sbjct: 159469 cggaggcggcgggggagaaggcgg 159446
to top
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 297    gcggcgggggagaaggcggcgacg 320
              |||||||||| |||||||||||||
Sbjct: 249658 gcggcgggggcgaaggcggcgacg 249681
to top
>emb|AJ720847.1| Gallus gallus mRNA for hypothetical protein, clone 27k23
          Length = 4093

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 gcggcgacgaggaggacggc 331
           ||||||||||||||||||||
Sbjct: 255 gcggcgacgaggaggacggc 274
to top
>dbj|AK124515.1| Homo sapiens cDNA FLJ42524 fis, clone BRACE3001384
          Length = 4587

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  cccacatcttcctccccttc 180
            ||||||||||||||||||||
Sbjct: 1626 cccacatcttcctccccttc 1645
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 299      ggcgggggagaaggcggcga 318
                ||||||||||||||||||||
Sbjct: 17714017 ggcgggggagaaggcggcga 17713998
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 295      acgcggcgggggagaaggcggcga 318
                ||||||||| ||||||||||||||
Sbjct: 11036851 acgcggcggcggagaaggcggcga 11036874
to top
>emb|BX833837.1|CNS0A0DT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZG12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 823

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 219 tgaggaggtacgtgagctacgctagcgagagctgcatcca 258
           |||| ||||||||||| | ||| || ||||||||||||||
Sbjct: 94  tgagaaggtacgtgaggttcgcgagtgagagctgcatcca 133
to top
>dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0682B08
          Length = 138376

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 295   acgcggcgggggagaaggcggcga 318
             ||||||||| ||||||||||||||
Sbjct: 65733 acgcggcggcggagaaggcggcga 65756
to top
>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0487H02
          Length = 145491

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 295    acgcggcgggggagaaggcggcga 318
              ||||||||| ||||||||||||||
Sbjct: 139693 acgcggcggcggagaaggcggcga 139716
to top
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0616D06
          Length = 153800

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 423   acgccgtctcgccggagcag 442
             ||||||||||||||||||||
Sbjct: 37040 acgccgtctcgccggagcag 37021
to top
>dbj|AP005630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0021C10
          Length = 119527

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   ggcgggggagaaggcggcga 318
             ||||||||||||||||||||
Sbjct: 70031 ggcgggggagaaggcggcga 70012
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>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 158927

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   ggcggcgacgaggaggacgg 330
             ||||||||||||||||||||
Sbjct: 69588 ggcggcgacgaggaggacgg 69569
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>gb|AC133944.4| Mus musculus BAC clone RP24-113L10 from 10, complete sequence
          Length = 167418

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 292   cggacgcggcgggggagaaggcgg 315
             |||| |||||||||||||||||||
Sbjct: 89606 cggaggcggcgggggagaaggcgg 89629
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>gb|U92461.1|GGU92461 Gallus gallus putative recombination factor (GdRAD54) mRNA, partial
           cds
          Length = 2203

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 311 ggcggcgacgaggaggacggcgggtggc 338
           |||||||| ||||||||||||| |||||
Sbjct: 20  ggcggcgaggaggaggacggcgagtggc 47
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>gb|AY830526.1| Threnetes leucurus NADH dehydrogenase subunit 2 (ND2) gene,
           complete cds; mitochondrial
          Length = 1040

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 71  cctcatctcaaaacatcatcatcc 94
           |||||||||||||||||| |||||
Sbjct: 126 cctcatctcaaaacatcaccatcc 149
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>gb|M60474.1|MUSMARCKS Mouse myristoylated alanine-rich C-kinase substrate (MARCKS) mRNA,
            complete cds
          Length = 2597

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 292  cggacgcggcgggggagaaggcgg 315
            |||| |||||||||||||||||||
Sbjct: 1117 cggaggcggcgggggagaaggcgg 1140
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>dbj|AB015999.1| Ipomoea nil Pkn1 (knotted-like gene) mRNA, complete cds
          Length = 1348

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 ggacgcggcgggggagaagg 312
           ||||||||||||||||||||
Sbjct: 453 ggacgcggcgggggagaagg 472


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,288,587
Number of Sequences: 3902068
Number of extensions: 3288587
Number of successful extensions: 81317
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80177
Number of HSP's gapped (non-prelim): 1136
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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