ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast71a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1WRK17_ARATH (Q9SJA8) Probable WRKY transcription factor 17 (WRKY... 90 3e-18
2WRK11_ARATH (Q9SV15) Probable WRKY transcription factor 11 (WRKY... 86 4e-17
3WRK15_ARATH (O22176) Probable WRKY transcription factor 15 (WRKY... 68 1e-11
4WRKY7_ARATH (Q9STX0) Probable WRKY transcription factor 7 (WRKY ... 65 7e-11
5Y319_THET8 (Q5SLH4) UPF0042 protein TTHA0319 32 0.52
6Y1664_THET2 (Q72H31) UPF0042 protein TT_C1664 32 0.52
7SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1 32 0.89
8SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1... 32 0.89
9TREF1_HUMAN (Q96PN7) Transcriptional-regulating factor 1 (Transc... 31 1.2
10SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1... 31 1.2
11YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C 30 2.0
12SPEG_BRARE (Q696W0) Striated muscle preferentially expressed pro... 30 2.0
13TRPE_METTM (P26940) Anthranilate synthase component 1 (EC 4.1.3.... 30 2.0
14SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1 30 2.0
15WRK21_ARATH (O04336) Probable WRKY transcription factor 21 (WRKY... 30 2.6
16CLPX_RHOBA (Q7UKU7) ATP-dependent Clp protease ATP-binding subun... 30 3.4
17CLPX_FRATT (Q5NH46) ATP-dependent Clp protease ATP-binding subun... 30 3.4
18WRK39_ARATH (Q9SR07) Probable WRKY transcription factor 39 (WRKY... 30 3.4
19VE2_HPV27 (P36789) Regulatory protein E2 30 3.4
20CLPX_RICCN (Q92GQ4) ATP-dependent Clp protease ATP-binding subun... 29 4.4
21LRCH1_MOUSE (P62046) Leucine-rich repeats and calponin homology ... 29 4.4
22CLPX_NOCFA (Q5Z061) ATP-dependent Clp protease ATP-binding subun... 29 5.8
23SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1 29 5.8
24HELS_AERPE (Q9YFQ8) Putative ski2-type helicase (EC 3.6.1.-) 29 5.8
25CLPX_LEPIN (Q8F353) ATP-dependent Clp protease ATP-binding subun... 28 7.6
26CLPX_LEPIC (Q72SG5) ATP-dependent Clp protease ATP-binding subun... 28 7.6
27CLPX_DEIRA (Q9RSZ6) ATP-dependent Clp protease ATP-binding subun... 28 7.6
28TRPE_METTH (O27692) Anthranilate synthase component 1 (EC 4.1.3.... 28 7.6
29CS024_HUMAN (Q9BVV8) Protein C19orf24 28 7.6
30Y4FR_RHISN (P55456) Hypothetical 60.5 kDa protein y4fR 28 9.9
31ODO1_PONPY (Q5RCB8) 2-oxoglutarate dehydrogenase E1 component, m... 28 9.9
32ODO1_MACFA (Q60HE2) 2-oxoglutarate dehydrogenase E1 component, m... 28 9.9
33CLPX_STRR6 (P63792) ATP-dependent Clp protease ATP-binding subun... 28 9.9
34CLPX_STRPN (P63791) ATP-dependent Clp protease ATP-binding subun... 28 9.9
35ODO1_HUMAN (Q02218) 2-oxoglutarate dehydrogenase E1 component, m... 28 9.9
36CLPX_AZOSE (Q5P160) ATP-dependent Clp protease ATP-binding subun... 28 9.9
37B4GT3_MOUSE (Q91YY2) Beta-1,4-galactosyltransferase 3 (EC 2.4.1.... 28 9.9
38ODP2_RALEU (Q59098) Dihydrolipoyllysine-residue acetyltransferas... 28 9.9

>WRK17_ARATH (Q9SJA8) Probable WRKY transcription factor 17 (WRKY DNA-binding|
           protein 17)
          Length = 321

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 57/116 (49%), Positives = 73/116 (62%)
 Frame = +2

Query: 89  MTMDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGKQQV 268
           MT+D++    + ++Q AIQEAA+ GL+ MEHLI  LS               PE+  + V
Sbjct: 1   MTVDIMR-LPKMEDQTAIQEAASQGLKSMEHLIRVLSNR-------------PEE--RNV 44

Query: 269 DCREITDMTVSKFKKVISILNHRTGHARFRRGPVVAQSQGPAVSEPAPVRASSSRP 436
           DC EITD TVSKFKKVIS+LN R+GHARFRRGPV      P+ S P PV+ ++  P
Sbjct: 45  DCSEITDFTVSKFKKVISLLN-RSGHARFRRGPV---HSPPSSSVPPPVKVTTPAP 96



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>WRK11_ARATH (Q9SV15) Probable WRKY transcription factor 11 (WRKY DNA-binding|
           protein 11)
          Length = 325

 Score = 85.9 bits (211), Expect = 4e-17
 Identities = 54/98 (55%), Positives = 64/98 (65%)
 Frame = +2

Query: 89  MTMDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGKQQV 268
           M +DL+  + + D+Q AIQEAA+ GL+ MEHLI  LS               PEQ +  V
Sbjct: 1   MAVDLMR-FPKIDDQTAIQEAASQGLQSMEHLIRVLSNR-------------PEQ-QHNV 45

Query: 269 DCREITDMTVSKFKKVISILNHRTGHARFRRGPVVAQS 382
           DC EITD TVSKFK VIS+LN RTGHARFRRGPV + S
Sbjct: 46  DCSEITDFTVSKFKTVISLLN-RTGHARFRRGPVHSTS 82



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>WRK15_ARATH (O22176) Probable WRKY transcription factor 15 (WRKY DNA-binding|
           protein 15)
          Length = 317

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 49/124 (39%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
 Frame = +2

Query: 80  VAMMTMDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGK 259
           V +MT + I G G   +  A+QEAAA+GL+ +E+ I  +SR   +   P  SS A     
Sbjct: 3   VELMTRNYISGVGA--DSFAVQEAAASGLKSIENFIGLMSRDSFNSDQP-SSSSASASAS 59

Query: 260 QQVDCRE----ITDMTVSKFKKVISILNH-RTGHARFRRGPVVAQSQGPAVSEPAPVRAS 424
              D         D  VSKFK+VIS+L+  RTGHARFRR PV   S      EP      
Sbjct: 60  AAADLESARNTTADAAVSKFKRVISLLDRTRTGHARFRRAPVHVISPVLLQEEPKTTPFQ 119

Query: 425 SSRP 436
           S  P
Sbjct: 120 SPLP 123



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>WRKY7_ARATH (Q9STX0) Probable WRKY transcription factor 7 (WRKY DNA-binding|
           protein 7)
          Length = 353

 Score = 65.1 bits (157), Expect = 7e-11
 Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 15/127 (11%)
 Frame = +2

Query: 80  VAMMTMDLIGGYGRAD-----------EQVAIQEAAAAGLRGMEHLILQLSRTGTSESSP 226
           V +M     GG G  D           E  A++EAA+AG+ G+E  +             
Sbjct: 3   VELMMSSYSGGGGGGDGFPAIAAAAKMEDTALREAASAGIHGVEEFL-----------KL 51

Query: 227 VGSSEAPEQGKQQVDCREITDMTVSKFKKVISILNH-RTGHARFRRGPVVAQS---QGPA 394
           +G S+ P + K Q +   +TD+ V+ FKKVIS+L   RTGHARFRR P   Q+   Q P 
Sbjct: 52  IGQSQQPTE-KSQTEITAVTDVAVNSFKKVISLLGRSRTGHARFRRAPASTQTPFKQTPV 110

Query: 395 VSEPAPV 415
           V E   V
Sbjct: 111 VEEEVEV 117



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>Y319_THET8 (Q5SLH4) UPF0042 protein TTHA0319|
          Length = 273

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 19/45 (42%), Positives = 24/45 (53%)
 Frame = +2

Query: 110 GYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEA 244
           G G    ++A +  A AGLRG  HL++      TSE SP G  EA
Sbjct: 102 GAGNLMREIAEERRALAGLRGRAHLVVD-----TSELSPRGLKEA 141



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>Y1664_THET2 (Q72H31) UPF0042 protein TT_C1664|
          Length = 273

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 19/45 (42%), Positives = 24/45 (53%)
 Frame = +2

Query: 110 GYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEA 244
           G G    ++A +  A AGLRG  HL++      TSE SP G  EA
Sbjct: 102 GAGNLMREIAEERRALAGLRGRAHLVVD-----TSELSPRGLKEA 141



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>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 425 KTPSPAPARTRRGPGTAPPQARAGT 351
           ++PSP P R RR P  APP  R  T
Sbjct: 562 RSPSPPPTRRRRSPSPAPPPRRRRT 586



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>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 425 KTPSPAPARTRRGPGTAPPQARAGT 351
           ++PSP P R RR P  APP  R  T
Sbjct: 548 RSPSPPPTRRRRSPSPAPPPRRRRT 572



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>TREF1_HUMAN (Q96PN7) Transcriptional-regulating factor 1|
           (Transcriptional-regulating protein 132) (Zinc finger
           transcription factor TReP-132) (Zinc finger protein
           rapa)
          Length = 1200

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
 Frame = +2

Query: 143 QEAAAAGLRGMEHLILQLSRTGTSESS--PVGSSEAPEQGKQQVDCREITDMTVSKFKKV 316
           Q+ + + +    HL    ++ G+ ESS  P G+       K ++ C     + + +FK +
Sbjct: 469 QQLSPSAMWPQMHLPDGRAQPGSPESSGQPKGAFGEQFDAKNKLTC----SICLKEFKNL 524

Query: 317 ISILNHRTGHARFRRGPVVAQSQGPAVSEPAP 412
            ++  H   H   R  P + Q +G  V  P P
Sbjct: 525 PALNGHMRSHGGMRASPNLKQEEGEKVLPPQP 556



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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 425 KTPSPAPARTRRGPGTAPP 369
           ++PSP PAR RR P  APP
Sbjct: 560 RSPSPPPARRRRSPSPAPP 578



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>YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C|
          Length = 515

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 417 LTGAGSDTAGPWDCATTGPRRNLA*PVRWL 328
           +TGAG +TA  WDC T  P   L     W+
Sbjct: 160 VTGAGDNTARIWDCDTQTPMHTLKGHYNWV 189



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>SPEG_BRARE (Q696W0) Striated muscle preferentially expressed protein kinase (EC|
            2.7.11.1)
          Length = 2995

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = -2

Query: 255  PCSGASEDPTGELSLVPVRESCKMRCSIPRSPAAAASWIATCSSALPYPPIRSMVIIATA 76
            P S  S+  + +  + P  +  KM+   P S  A  + +AT + +L  P + S  I  T 
Sbjct: 2498 PYSNESDGVSIDTKVTPQHQPAKMKTHSPASFPAMTAAVATSAFSLSLPSVFSQSISPTP 2557

Query: 75   SASASQDKT 49
            + SA    T
Sbjct: 2558 AQSADVSNT 2566



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>TRPE_METTM (P26940) Anthranilate synthase component 1 (EC 4.1.3.27)|
           (Anthranilate synthase component I)
          Length = 462

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +2

Query: 176 EHLIL-QLSRTGTSESSPVGSSEAPEQGKQQVDCREITDMTVSKFKKVISILNHRTGHAR 352
           EHL+L  L+R      S  GS E PE             MT+ +F  V  IL+H TG  R
Sbjct: 301 EHLMLVDLARNDIGRVSEFGSVEVPEY------------MTIKRFSHVQHILSHVTGKLR 348



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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 425 KTPSPAPARTRRGPGTAPPQAR 360
           ++PSP PAR RR P   PP  R
Sbjct: 542 RSPSPPPARRRRSPSPPPPPRR 563



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>WRK21_ARATH (O04336) Probable WRKY transcription factor 21 (WRKY DNA-binding|
           protein 21)
          Length = 380

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +2

Query: 284 TDMTVSKFKKVISILNHRTGHARFRR 361
           T   V +FK+V S+L+   GHARFRR
Sbjct: 41  TREAVIRFKRVGSLLSSSVGHARFRR 66



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>CLPX_RHOBA (Q7UKU7) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 466

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
 Frame = +2

Query: 86  MMTMDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGKQQ 265
           ++ +D +   G  +  V+I    +    G++  +L++     +   P G  + PEQ   Q
Sbjct: 230 ILYIDEVDKIGSTNGNVSITRDVSG--EGVQQSLLKMLEGTVANVPPQGGRKHPEQQYIQ 287

Query: 266 VDCREITDMTVSKFKKVISILNHRTGHAR--FRRGPVVAQSQGP 391
           +D   I  +    F  +  I+  R GH    F  G  V   Q P
Sbjct: 288 LDTSNILFICGGTFVGIEEIIRRRLGHRTLGFGEGANVRNEQTP 331



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>CLPX_FRATT (Q5NH46) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 417

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 20/81 (24%), Positives = 33/81 (40%)
 Frame = +2

Query: 95  MDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGKQQVDC 274
           +D I    R  E  +I    +    G++  +L+L     S   P G  + P Q   QVD 
Sbjct: 176 IDEIDKIARKSESTSITRDVSG--EGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDT 233

Query: 275 REITDMTVSKFKKVISILNHR 337
            +I  +    F  +  ++ HR
Sbjct: 234 SDILFICGGAFAGIEKVIKHR 254



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>WRK39_ARATH (Q9SR07) Probable WRKY transcription factor 39 (WRKY DNA-binding|
           protein 39)
          Length = 330

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 284 TDMTVSKFKKVISILNHRTGHARFR 358
           T   VSKFK+V S+L    GH +FR
Sbjct: 36  TGEVVSKFKRVASLLTRGLGHGKFR 60



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>VE2_HPV27 (P36789) Regulatory protein E2|
          Length = 388

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = -2

Query: 174 IPRSPAAAASWIATCSSALPYPPIRSMVIIATASASASQDKTGCSP 37
           I  + A+ +S  AT S   P  PIR  V    A ASA+  +TG +P
Sbjct: 195 IHHTSASVSSTQATASDDEPLSPIRLAVSPVPAPASAASARTGTAP 240



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>CLPX_RICCN (Q92GQ4) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 425

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 15/60 (25%), Positives = 28/60 (46%)
 Frame = +2

Query: 170 GMEHLILQLSRTGTSESSPVGSSEAPEQGKQQVDCREITDMTVSKFKKVISILNHRTGHA 349
           G++  +L++     +   P G  + P+Q   Q+D   I  +    F  + SI+  RT H+
Sbjct: 203 GVQQALLKIMEGTVASVPPQGGRKHPQQDFVQLDTSNILFICGGAFMGIDSIITSRTNHS 262



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>LRCH1_MOUSE (P62046) Leucine-rich repeats and calponin homology|
           domain-containing protein 1 (Calponin homology
           domain-containing protein 1)
          Length = 709

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 205 CPGELQDEVLHPAQPRRRRLLDCHLLVRP 119
           CP E+Q  +   + PRR +LL  H+ +RP
Sbjct: 541 CPEEVQGSLQAESSPRRPQLLSRHVFLRP 569



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>CLPX_NOCFA (Q5Z061) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 426

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 14/59 (23%), Positives = 27/59 (45%)
 Frame = +2

Query: 170 GMEHLILQLSRTGTSESSPVGSSEAPEQGKQQVDCREITDMTVSKFKKVISILNHRTGH 346
           G++  +L++     +   P G  + P Q   Q+D   +  +    F  +  I++ RTGH
Sbjct: 208 GVQQALLKILEGTQASVPPQGGRKHPHQEFIQIDTTNVLFIVAGAFAGLEKIISDRTGH 266



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>SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1|
          Length = 881

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 18/75 (24%), Positives = 32/75 (42%)
 Frame = -2

Query: 231 PTGELSLVPVRESCKMRCSIPRSPAAAASWIATCSSALPYPPIRSMVIIATASASASQDK 52
           PT  L+  P R++ ++R   P  P+A     AT  S +  P      +++     A+   
Sbjct: 753 PTQSLASPPARDALQLRSQDPTPPSAPQE--ATEGSKVTEPSAPCQALVSIGDLQATFHG 810

Query: 51  TGCSPDNENGARRSP 7
              +P + + A R P
Sbjct: 811 IRSAPSSSDSATRDP 825



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>HELS_AERPE (Q9YFQ8) Putative ski2-type helicase (EC 3.6.1.-)|
          Length = 702

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = +2

Query: 98  DLIGGYGRADEQVAIQEAAAAGLRGMEHLIL 190
           DLI GY RA  +    E+  AGLRG+ H IL
Sbjct: 370 DLISGYIRAPPERV--ESRLAGLRGLRHFIL 398



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>CLPX_LEPIN (Q8F353) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 420

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 19/88 (21%), Positives = 38/88 (43%)
 Frame = +2

Query: 80  VAMMTMDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGK 259
           V ++ +D +    R  +  +I    +    G++  +L++     +   P G  + P Q  
Sbjct: 180 VGIIYIDEVDKIARKSDSASITRDVSG--EGVQQALLKIIEGTVANVPPQGGRKHPHQEY 237

Query: 260 QQVDCREITDMTVSKFKKVISILNHRTG 343
            QVD + I  +    F  + +I+  RTG
Sbjct: 238 LQVDTKNILFILGGAFVDLPNIIKSRTG 265



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>CLPX_LEPIC (Q72SG5) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 420

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 19/88 (21%), Positives = 38/88 (43%)
 Frame = +2

Query: 80  VAMMTMDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGK 259
           V ++ +D +    R  +  +I    +    G++  +L++     +   P G  + P Q  
Sbjct: 180 VGIIYIDEVDKIARKSDSASITRDVSG--EGVQQALLKIIEGTVANVPPQGGRKHPHQEY 237

Query: 260 QQVDCREITDMTVSKFKKVISILNHRTG 343
            QVD + I  +    F  + +I+  RTG
Sbjct: 238 LQVDTKNILFILGGAFVDLPNIIKSRTG 265



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>CLPX_DEIRA (Q9RSZ6) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 403

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 20/82 (24%), Positives = 35/82 (42%)
 Frame = +2

Query: 95  MDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGKQQVDC 274
           +D I    R  E  +I    +    G++  +L++     ++  P G  + P+Q   QVD 
Sbjct: 175 VDEIDKIARKSEGTSITRDVSG--EGVQQALLKIIEGTVAQVPPQGGRKHPQQELVQVDT 232

Query: 275 REITDMTVSKFKKVISILNHRT 340
           R I  +    F+ +  I   RT
Sbjct: 233 RNILFIVGGAFESMSEIARART 254



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>TRPE_METTH (O27692) Anthranilate synthase component 1 (EC 4.1.3.27)|
           (Anthranilate synthase component I)
          Length = 464

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +2

Query: 176 EHLIL-QLSRTGTSESSPVGSSEAPEQGKQQVDCREITDMTVSKFKKVISILNHRTGHAR 352
           EHL+L  L+R      S  G+ + PE             MT+ +F  V  IL+H TG  R
Sbjct: 298 EHLMLVDLARNDLGRISEFGTVQVPEY------------MTIRRFSHVQHILSHVTG--R 343

Query: 353 FRRG 364
            R+G
Sbjct: 344 LRKG 347



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>CS024_HUMAN (Q9BVV8) Protein C19orf24|
          Length = 132

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 23/87 (26%), Positives = 35/87 (40%)
 Frame = -2

Query: 261 CFPCSGASEDPTGELSLVPVRESCKMRCSIPRSPAAAASWIATCSSALPYPPIRSMVIIA 82
           C+P   +   PT EL L P + +  +  +    P + ASW+      L  P   S V   
Sbjct: 24  CWPRGWSHPVPTRELLLEPAQPADLLPPAPTAGPCSLASWM------LSQPGRGSQVKTG 77

Query: 81  TASASASQDKTGCSPDNENGARRSPVG 1
               + +QD     PD +     +PVG
Sbjct: 78  GTPTATAQDAEAPLPDCDLCLSPAPVG 104



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>Y4FR_RHISN (P55456) Hypothetical 60.5 kDa protein y4fR|
          Length = 546

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = -2

Query: 219 LSLVPVRESCKMRCSIPRSPAAAASWIATCSSALPYPPIRSMVIIATASASASQDKTGCS 40
           L++ P+ E+ +   S P SPAAAA W+   + A              ++AS+SQ +   +
Sbjct: 8   LAVGPLFENPESESSEPGSPAAAARWVEASTEA------------EASAASSSQGQIVAA 55

Query: 39  PDNE 28
           P  E
Sbjct: 56  PTAE 59



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>ODO1_PONPY (Q5RCB8) 2-oxoglutarate dehydrogenase E1 component, mitochondrial|
           precursor (EC 1.2.4.2) (Alpha-ketoglutarate
           dehydrogenase)
          Length = 1023

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 169 AQPRRRRLLDCHLLVRPPVSSNQIHGHH 86
           AQP   +L++ HL V+  + + QI GHH
Sbjct: 116 AQPNVDKLVEDHLAVQSLIRAYQIRGHH 143



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>ODO1_MACFA (Q60HE2) 2-oxoglutarate dehydrogenase E1 component, mitochondrial|
           precursor (EC 1.2.4.2) (Alpha-ketoglutarate
           dehydrogenase)
          Length = 1023

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 169 AQPRRRRLLDCHLLVRPPVSSNQIHGHH 86
           AQP   +L++ HL V+  + + QI GHH
Sbjct: 116 AQPNVDKLVEDHLAVQSLIRAYQIRGHH 143



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>CLPX_STRR6 (P63792) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 410

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 19/83 (22%), Positives = 35/83 (42%)
 Frame = +2

Query: 95  MDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGKQQVDC 274
           +D I    +  E V+I    +    G++  +L++     +   P G  + P+Q   QVD 
Sbjct: 183 VDEIDKIAKKSENVSITRDVSG--EGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT 240

Query: 275 REITDMTVSKFKKVISILNHRTG 343
           + I  +    F  +  I+  R G
Sbjct: 241 KNILFIVGGAFDGIEEIVKQRLG 263



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>CLPX_STRPN (P63791) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 410

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 19/83 (22%), Positives = 35/83 (42%)
 Frame = +2

Query: 95  MDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGKQQVDC 274
           +D I    +  E V+I    +    G++  +L++     +   P G  + P+Q   QVD 
Sbjct: 183 VDEIDKIAKKSENVSITRDVSG--EGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT 240

Query: 275 REITDMTVSKFKKVISILNHRTG 343
           + I  +    F  +  I+  R G
Sbjct: 241 KNILFIVGGAFDGIEEIVKQRLG 263



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>ODO1_HUMAN (Q02218) 2-oxoglutarate dehydrogenase E1 component, mitochondrial|
           precursor (EC 1.2.4.2) (Alpha-ketoglutarate
           dehydrogenase)
          Length = 1002

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 169 AQPRRRRLLDCHLLVRPPVSSNQIHGHH 86
           AQP   +L++ HL V+  + + QI GHH
Sbjct: 116 AQPNVDKLVEDHLAVQSLIRAYQIRGHH 143



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>CLPX_AZOSE (Q5P160) ATP-dependent Clp protease ATP-binding subunit clpX|
          Length = 422

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 18/78 (23%), Positives = 32/78 (41%)
 Frame = +2

Query: 170 GMEHLILQLSRTGTSESSPVGSSEAPEQGKQQVDCREITDMTVSKFKKVISILNHRTGHA 349
           G++  +L+L     +   P G  + P Q   Q+D   I  +    F  +  ++ +RT   
Sbjct: 207 GVQQALLKLIEGTVASIPPQGGRKHPNQDFIQIDTTNILFICGGAFDGLEKVIRNRTEKI 266

Query: 350 RFRRGPVVAQSQGPAVSE 403
               G  +   +G  VSE
Sbjct: 267 GIGFGAEIKSREGKNVSE 284



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>B4GT3_MOUSE (Q91YY2) Beta-1,4-galactosyltransferase 3 (EC 2.4.1.-)|
           (Beta-1,4-GalTase 3) (Beta4Gal-T3) (b4Gal-T3)
           (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 3) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 3) [Includes: N
          Length = 395

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = -2

Query: 174 IPRSPAAAASWIATCSSALPYPPIRSMVIIATASASAS-----QDKTGCSPDNENGARRS 10
           +P +P AA    A  + ALPY P RS  ++   S S S      +    +P  E+G R  
Sbjct: 61  LPAAPGAAG---APPAQALPYCPERSPFLVGPVSVSFSPVPSLAEIVERNPRVESGGRYR 117

Query: 9   PVG 1
           P G
Sbjct: 118 PAG 120



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>ODP2_RALEU (Q59098) Dihydrolipoyllysine-residue acetyltransferase component of|
           pyruvate dehydrogenase complex (EC 2.3.1.12) (E2)
           (Dihydrolipoamide acetyltransferase component of
           pyruvate dehydrogenase complex)
          Length = 553

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 416 SPAPARTRRGPGTAPPQARAGTWRDRC 336
           +PAPA +   P  AP  A +GT R  C
Sbjct: 210 APAPAASAPAPAPAPAAAASGTGRSTC 236


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,893,437
Number of Sequences: 219361
Number of extensions: 944129
Number of successful extensions: 4850
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 4445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4829
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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