| Clone Name | bast71a05 |
|---|---|
| Clone Library Name | barley_pub |
>WRK17_ARATH (Q9SJA8) Probable WRKY transcription factor 17 (WRKY DNA-binding| protein 17) Length = 321 Score = 89.7 bits (221), Expect = 3e-18 Identities = 57/116 (49%), Positives = 73/116 (62%) Frame = +2 Query: 89 MTMDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGKQQV 268 MT+D++ + ++Q AIQEAA+ GL+ MEHLI LS PE+ + V Sbjct: 1 MTVDIMR-LPKMEDQTAIQEAASQGLKSMEHLIRVLSNR-------------PEE--RNV 44 Query: 269 DCREITDMTVSKFKKVISILNHRTGHARFRRGPVVAQSQGPAVSEPAPVRASSSRP 436 DC EITD TVSKFKKVIS+LN R+GHARFRRGPV P+ S P PV+ ++ P Sbjct: 45 DCSEITDFTVSKFKKVISLLN-RSGHARFRRGPV---HSPPSSSVPPPVKVTTPAP 96
>WRK11_ARATH (Q9SV15) Probable WRKY transcription factor 11 (WRKY DNA-binding| protein 11) Length = 325 Score = 85.9 bits (211), Expect = 4e-17 Identities = 54/98 (55%), Positives = 64/98 (65%) Frame = +2 Query: 89 MTMDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGKQQV 268 M +DL+ + + D+Q AIQEAA+ GL+ MEHLI LS PEQ + V Sbjct: 1 MAVDLMR-FPKIDDQTAIQEAASQGLQSMEHLIRVLSNR-------------PEQ-QHNV 45 Query: 269 DCREITDMTVSKFKKVISILNHRTGHARFRRGPVVAQS 382 DC EITD TVSKFK VIS+LN RTGHARFRRGPV + S Sbjct: 46 DCSEITDFTVSKFKTVISLLN-RTGHARFRRGPVHSTS 82
>WRK15_ARATH (O22176) Probable WRKY transcription factor 15 (WRKY DNA-binding| protein 15) Length = 317 Score = 67.8 bits (164), Expect = 1e-11 Identities = 49/124 (39%), Positives = 62/124 (50%), Gaps = 5/124 (4%) Frame = +2 Query: 80 VAMMTMDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGK 259 V +MT + I G G + A+QEAAA+GL+ +E+ I +SR + P SS A Sbjct: 3 VELMTRNYISGVGA--DSFAVQEAAASGLKSIENFIGLMSRDSFNSDQP-SSSSASASAS 59 Query: 260 QQVDCRE----ITDMTVSKFKKVISILNH-RTGHARFRRGPVVAQSQGPAVSEPAPVRAS 424 D D VSKFK+VIS+L+ RTGHARFRR PV S EP Sbjct: 60 AAADLESARNTTADAAVSKFKRVISLLDRTRTGHARFRRAPVHVISPVLLQEEPKTTPFQ 119 Query: 425 SSRP 436 S P Sbjct: 120 SPLP 123
>WRKY7_ARATH (Q9STX0) Probable WRKY transcription factor 7 (WRKY DNA-binding| protein 7) Length = 353 Score = 65.1 bits (157), Expect = 7e-11 Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 15/127 (11%) Frame = +2 Query: 80 VAMMTMDLIGGYGRAD-----------EQVAIQEAAAAGLRGMEHLILQLSRTGTSESSP 226 V +M GG G D E A++EAA+AG+ G+E + Sbjct: 3 VELMMSSYSGGGGGGDGFPAIAAAAKMEDTALREAASAGIHGVEEFL-----------KL 51 Query: 227 VGSSEAPEQGKQQVDCREITDMTVSKFKKVISILNH-RTGHARFRRGPVVAQS---QGPA 394 +G S+ P + K Q + +TD+ V+ FKKVIS+L RTGHARFRR P Q+ Q P Sbjct: 52 IGQSQQPTE-KSQTEITAVTDVAVNSFKKVISLLGRSRTGHARFRRAPASTQTPFKQTPV 110 Query: 395 VSEPAPV 415 V E V Sbjct: 111 VEEEVEV 117
>Y319_THET8 (Q5SLH4) UPF0042 protein TTHA0319| Length = 273 Score = 32.3 bits (72), Expect = 0.52 Identities = 19/45 (42%), Positives = 24/45 (53%) Frame = +2 Query: 110 GYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEA 244 G G ++A + A AGLRG HL++ TSE SP G EA Sbjct: 102 GAGNLMREIAEERRALAGLRGRAHLVVD-----TSELSPRGLKEA 141
>Y1664_THET2 (Q72H31) UPF0042 protein TT_C1664| Length = 273 Score = 32.3 bits (72), Expect = 0.52 Identities = 19/45 (42%), Positives = 24/45 (53%) Frame = +2 Query: 110 GYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEA 244 G G ++A + A AGLRG HL++ TSE SP G EA Sbjct: 102 GAGNLMREIAEERRALAGLRGRAHLVVD-----TSELSPRGLKEA 141
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 31.6 bits (70), Expect = 0.89 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -3 Query: 425 KTPSPAPARTRRGPGTAPPQARAGT 351 ++PSP P R RR P APP R T Sbjct: 562 RSPSPPPTRRRRSPSPAPPPRRRRT 586
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 31.6 bits (70), Expect = 0.89 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -3 Query: 425 KTPSPAPARTRRGPGTAPPQARAGT 351 ++PSP P R RR P APP R T Sbjct: 548 RSPSPPPTRRRRSPSPAPPPRRRRT 572
>TREF1_HUMAN (Q96PN7) Transcriptional-regulating factor 1| (Transcriptional-regulating protein 132) (Zinc finger transcription factor TReP-132) (Zinc finger protein rapa) Length = 1200 Score = 31.2 bits (69), Expect = 1.2 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 2/92 (2%) Frame = +2 Query: 143 QEAAAAGLRGMEHLILQLSRTGTSESS--PVGSSEAPEQGKQQVDCREITDMTVSKFKKV 316 Q+ + + + HL ++ G+ ESS P G+ K ++ C + + +FK + Sbjct: 469 QQLSPSAMWPQMHLPDGRAQPGSPESSGQPKGAFGEQFDAKNKLTC----SICLKEFKNL 524 Query: 317 ISILNHRTGHARFRRGPVVAQSQGPAVSEPAP 412 ++ H H R P + Q +G V P P Sbjct: 525 PALNGHMRSHGGMRASPNLKQEEGEKVLPPQP 556
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 31.2 bits (69), Expect = 1.2 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 425 KTPSPAPARTRRGPGTAPP 369 ++PSP PAR RR P APP Sbjct: 560 RSPSPPPARRRRSPSPAPP 578
>YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C| Length = 515 Score = 30.4 bits (67), Expect = 2.0 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -2 Query: 417 LTGAGSDTAGPWDCATTGPRRNLA*PVRWL 328 +TGAG +TA WDC T P L W+ Sbjct: 160 VTGAGDNTARIWDCDTQTPMHTLKGHYNWV 189
>SPEG_BRARE (Q696W0) Striated muscle preferentially expressed protein kinase (EC| 2.7.11.1) Length = 2995 Score = 30.4 bits (67), Expect = 2.0 Identities = 19/69 (27%), Positives = 31/69 (44%) Frame = -2 Query: 255 PCSGASEDPTGELSLVPVRESCKMRCSIPRSPAAAASWIATCSSALPYPPIRSMVIIATA 76 P S S+ + + + P + KM+ P S A + +AT + +L P + S I T Sbjct: 2498 PYSNESDGVSIDTKVTPQHQPAKMKTHSPASFPAMTAAVATSAFSLSLPSVFSQSISPTP 2557 Query: 75 SASASQDKT 49 + SA T Sbjct: 2558 AQSADVSNT 2566
>TRPE_METTM (P26940) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 462 Score = 30.4 bits (67), Expect = 2.0 Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = +2 Query: 176 EHLIL-QLSRTGTSESSPVGSSEAPEQGKQQVDCREITDMTVSKFKKVISILNHRTGHAR 352 EHL+L L+R S GS E PE MT+ +F V IL+H TG R Sbjct: 301 EHLMLVDLARNDIGRVSEFGSVEVPEY------------MTIKRFSHVQHILSHVTGKLR 348
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 30.4 bits (67), Expect = 2.0 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -3 Query: 425 KTPSPAPARTRRGPGTAPPQAR 360 ++PSP PAR RR P PP R Sbjct: 542 RSPSPPPARRRRSPSPPPPPRR 563
>WRK21_ARATH (O04336) Probable WRKY transcription factor 21 (WRKY DNA-binding| protein 21) Length = 380 Score = 30.0 bits (66), Expect = 2.6 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +2 Query: 284 TDMTVSKFKKVISILNHRTGHARFRR 361 T V +FK+V S+L+ GHARFRR Sbjct: 41 TREAVIRFKRVGSLLSSSVGHARFRR 66
>CLPX_RHOBA (Q7UKU7) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 466 Score = 29.6 bits (65), Expect = 3.4 Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 2/104 (1%) Frame = +2 Query: 86 MMTMDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGKQQ 265 ++ +D + G + V+I + G++ +L++ + P G + PEQ Q Sbjct: 230 ILYIDEVDKIGSTNGNVSITRDVSG--EGVQQSLLKMLEGTVANVPPQGGRKHPEQQYIQ 287 Query: 266 VDCREITDMTVSKFKKVISILNHRTGHAR--FRRGPVVAQSQGP 391 +D I + F + I+ R GH F G V Q P Sbjct: 288 LDTSNILFICGGTFVGIEEIIRRRLGHRTLGFGEGANVRNEQTP 331
>CLPX_FRATT (Q5NH46) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 417 Score = 29.6 bits (65), Expect = 3.4 Identities = 20/81 (24%), Positives = 33/81 (40%) Frame = +2 Query: 95 MDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGKQQVDC 274 +D I R E +I + G++ +L+L S P G + P Q QVD Sbjct: 176 IDEIDKIARKSESTSITRDVSG--EGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDT 233 Query: 275 REITDMTVSKFKKVISILNHR 337 +I + F + ++ HR Sbjct: 234 SDILFICGGAFAGIEKVIKHR 254
>WRK39_ARATH (Q9SR07) Probable WRKY transcription factor 39 (WRKY DNA-binding| protein 39) Length = 330 Score = 29.6 bits (65), Expect = 3.4 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +2 Query: 284 TDMTVSKFKKVISILNHRTGHARFR 358 T VSKFK+V S+L GH +FR Sbjct: 36 TGEVVSKFKRVASLLTRGLGHGKFR 60
>VE2_HPV27 (P36789) Regulatory protein E2| Length = 388 Score = 29.6 bits (65), Expect = 3.4 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = -2 Query: 174 IPRSPAAAASWIATCSSALPYPPIRSMVIIATASASASQDKTGCSP 37 I + A+ +S AT S P PIR V A ASA+ +TG +P Sbjct: 195 IHHTSASVSSTQATASDDEPLSPIRLAVSPVPAPASAASARTGTAP 240
>CLPX_RICCN (Q92GQ4) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 425 Score = 29.3 bits (64), Expect = 4.4 Identities = 15/60 (25%), Positives = 28/60 (46%) Frame = +2 Query: 170 GMEHLILQLSRTGTSESSPVGSSEAPEQGKQQVDCREITDMTVSKFKKVISILNHRTGHA 349 G++ +L++ + P G + P+Q Q+D I + F + SI+ RT H+ Sbjct: 203 GVQQALLKIMEGTVASVPPQGGRKHPQQDFVQLDTSNILFICGGAFMGIDSIITSRTNHS 262
>LRCH1_MOUSE (P62046) Leucine-rich repeats and calponin homology| domain-containing protein 1 (Calponin homology domain-containing protein 1) Length = 709 Score = 29.3 bits (64), Expect = 4.4 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -1 Query: 205 CPGELQDEVLHPAQPRRRRLLDCHLLVRP 119 CP E+Q + + PRR +LL H+ +RP Sbjct: 541 CPEEVQGSLQAESSPRRPQLLSRHVFLRP 569
>CLPX_NOCFA (Q5Z061) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 426 Score = 28.9 bits (63), Expect = 5.8 Identities = 14/59 (23%), Positives = 27/59 (45%) Frame = +2 Query: 170 GMEHLILQLSRTGTSESSPVGSSEAPEQGKQQVDCREITDMTVSKFKKVISILNHRTGH 346 G++ +L++ + P G + P Q Q+D + + F + I++ RTGH Sbjct: 208 GVQQALLKILEGTQASVPPQGGRKHPHQEFIQIDTTNVLFIVAGAFAGLEKIISDRTGH 266
>SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1| Length = 881 Score = 28.9 bits (63), Expect = 5.8 Identities = 18/75 (24%), Positives = 32/75 (42%) Frame = -2 Query: 231 PTGELSLVPVRESCKMRCSIPRSPAAAASWIATCSSALPYPPIRSMVIIATASASASQDK 52 PT L+ P R++ ++R P P+A AT S + P +++ A+ Sbjct: 753 PTQSLASPPARDALQLRSQDPTPPSAPQE--ATEGSKVTEPSAPCQALVSIGDLQATFHG 810 Query: 51 TGCSPDNENGARRSP 7 +P + + A R P Sbjct: 811 IRSAPSSSDSATRDP 825
>HELS_AERPE (Q9YFQ8) Putative ski2-type helicase (EC 3.6.1.-)| Length = 702 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +2 Query: 98 DLIGGYGRADEQVAIQEAAAAGLRGMEHLIL 190 DLI GY RA + E+ AGLRG+ H IL Sbjct: 370 DLISGYIRAPPERV--ESRLAGLRGLRHFIL 398
>CLPX_LEPIN (Q8F353) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 420 Score = 28.5 bits (62), Expect = 7.6 Identities = 19/88 (21%), Positives = 38/88 (43%) Frame = +2 Query: 80 VAMMTMDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGK 259 V ++ +D + R + +I + G++ +L++ + P G + P Q Sbjct: 180 VGIIYIDEVDKIARKSDSASITRDVSG--EGVQQALLKIIEGTVANVPPQGGRKHPHQEY 237 Query: 260 QQVDCREITDMTVSKFKKVISILNHRTG 343 QVD + I + F + +I+ RTG Sbjct: 238 LQVDTKNILFILGGAFVDLPNIIKSRTG 265
>CLPX_LEPIC (Q72SG5) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 420 Score = 28.5 bits (62), Expect = 7.6 Identities = 19/88 (21%), Positives = 38/88 (43%) Frame = +2 Query: 80 VAMMTMDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGK 259 V ++ +D + R + +I + G++ +L++ + P G + P Q Sbjct: 180 VGIIYIDEVDKIARKSDSASITRDVSG--EGVQQALLKIIEGTVANVPPQGGRKHPHQEY 237 Query: 260 QQVDCREITDMTVSKFKKVISILNHRTG 343 QVD + I + F + +I+ RTG Sbjct: 238 LQVDTKNILFILGGAFVDLPNIIKSRTG 265
>CLPX_DEIRA (Q9RSZ6) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 403 Score = 28.5 bits (62), Expect = 7.6 Identities = 20/82 (24%), Positives = 35/82 (42%) Frame = +2 Query: 95 MDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGKQQVDC 274 +D I R E +I + G++ +L++ ++ P G + P+Q QVD Sbjct: 175 VDEIDKIARKSEGTSITRDVSG--EGVQQALLKIIEGTVAQVPPQGGRKHPQQELVQVDT 232 Query: 275 REITDMTVSKFKKVISILNHRT 340 R I + F+ + I RT Sbjct: 233 RNILFIVGGAFESMSEIARART 254
>TRPE_METTH (O27692) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 464 Score = 28.5 bits (62), Expect = 7.6 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = +2 Query: 176 EHLIL-QLSRTGTSESSPVGSSEAPEQGKQQVDCREITDMTVSKFKKVISILNHRTGHAR 352 EHL+L L+R S G+ + PE MT+ +F V IL+H TG R Sbjct: 298 EHLMLVDLARNDLGRISEFGTVQVPEY------------MTIRRFSHVQHILSHVTG--R 343 Query: 353 FRRG 364 R+G Sbjct: 344 LRKG 347
>CS024_HUMAN (Q9BVV8) Protein C19orf24| Length = 132 Score = 28.5 bits (62), Expect = 7.6 Identities = 23/87 (26%), Positives = 35/87 (40%) Frame = -2 Query: 261 CFPCSGASEDPTGELSLVPVRESCKMRCSIPRSPAAAASWIATCSSALPYPPIRSMVIIA 82 C+P + PT EL L P + + + + P + ASW+ L P S V Sbjct: 24 CWPRGWSHPVPTRELLLEPAQPADLLPPAPTAGPCSLASWM------LSQPGRGSQVKTG 77 Query: 81 TASASASQDKTGCSPDNENGARRSPVG 1 + +QD PD + +PVG Sbjct: 78 GTPTATAQDAEAPLPDCDLCLSPAPVG 104
>Y4FR_RHISN (P55456) Hypothetical 60.5 kDa protein y4fR| Length = 546 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/64 (29%), Positives = 31/64 (48%) Frame = -2 Query: 219 LSLVPVRESCKMRCSIPRSPAAAASWIATCSSALPYPPIRSMVIIATASASASQDKTGCS 40 L++ P+ E+ + S P SPAAAA W+ + A ++AS+SQ + + Sbjct: 8 LAVGPLFENPESESSEPGSPAAAARWVEASTEA------------EASAASSSQGQIVAA 55 Query: 39 PDNE 28 P E Sbjct: 56 PTAE 59
>ODO1_PONPY (Q5RCB8) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1023 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -1 Query: 169 AQPRRRRLLDCHLLVRPPVSSNQIHGHH 86 AQP +L++ HL V+ + + QI GHH Sbjct: 116 AQPNVDKLVEDHLAVQSLIRAYQIRGHH 143
>ODO1_MACFA (Q60HE2) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1023 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -1 Query: 169 AQPRRRRLLDCHLLVRPPVSSNQIHGHH 86 AQP +L++ HL V+ + + QI GHH Sbjct: 116 AQPNVDKLVEDHLAVQSLIRAYQIRGHH 143
>CLPX_STRR6 (P63792) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 410 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/83 (22%), Positives = 35/83 (42%) Frame = +2 Query: 95 MDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGKQQVDC 274 +D I + E V+I + G++ +L++ + P G + P+Q QVD Sbjct: 183 VDEIDKIAKKSENVSITRDVSG--EGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT 240 Query: 275 REITDMTVSKFKKVISILNHRTG 343 + I + F + I+ R G Sbjct: 241 KNILFIVGGAFDGIEEIVKQRLG 263
>CLPX_STRPN (P63791) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 410 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/83 (22%), Positives = 35/83 (42%) Frame = +2 Query: 95 MDLIGGYGRADEQVAIQEAAAAGLRGMEHLILQLSRTGTSESSPVGSSEAPEQGKQQVDC 274 +D I + E V+I + G++ +L++ + P G + P+Q QVD Sbjct: 183 VDEIDKIAKKSENVSITRDVSG--EGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT 240 Query: 275 REITDMTVSKFKKVISILNHRTG 343 + I + F + I+ R G Sbjct: 241 KNILFIVGGAFDGIEEIVKQRLG 263
>ODO1_HUMAN (Q02218) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1002 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -1 Query: 169 AQPRRRRLLDCHLLVRPPVSSNQIHGHH 86 AQP +L++ HL V+ + + QI GHH Sbjct: 116 AQPNVDKLVEDHLAVQSLIRAYQIRGHH 143
>CLPX_AZOSE (Q5P160) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 422 Score = 28.1 bits (61), Expect = 9.9 Identities = 18/78 (23%), Positives = 32/78 (41%) Frame = +2 Query: 170 GMEHLILQLSRTGTSESSPVGSSEAPEQGKQQVDCREITDMTVSKFKKVISILNHRTGHA 349 G++ +L+L + P G + P Q Q+D I + F + ++ +RT Sbjct: 207 GVQQALLKLIEGTVASIPPQGGRKHPNQDFIQIDTTNILFICGGAFDGLEKVIRNRTEKI 266 Query: 350 RFRRGPVVAQSQGPAVSE 403 G + +G VSE Sbjct: 267 GIGFGAEIKSREGKNVSE 284
>B4GT3_MOUSE (Q91YY2) Beta-1,4-galactosyltransferase 3 (EC 2.4.1.-)| (Beta-1,4-GalTase 3) (Beta4Gal-T3) (b4Gal-T3) (UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 3) (UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 3) [Includes: N Length = 395 Score = 28.1 bits (61), Expect = 9.9 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Frame = -2 Query: 174 IPRSPAAAASWIATCSSALPYPPIRSMVIIATASASAS-----QDKTGCSPDNENGARRS 10 +P +P AA A + ALPY P RS ++ S S S + +P E+G R Sbjct: 61 LPAAPGAAG---APPAQALPYCPERSPFLVGPVSVSFSPVPSLAEIVERNPRVESGGRYR 117 Query: 9 PVG 1 P G Sbjct: 118 PAG 120
>ODP2_RALEU (Q59098) Dihydrolipoyllysine-residue acetyltransferase component of| pyruvate dehydrogenase complex (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) Length = 553 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 Query: 416 SPAPARTRRGPGTAPPQARAGTWRDRC 336 +PAPA + P AP A +GT R C Sbjct: 210 APAPAASAPAPAPAPAAAASGTGRSTC 236 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,893,437 Number of Sequences: 219361 Number of extensions: 944129 Number of successful extensions: 4850 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 4445 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4829 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)