Clone Information

BLAST Search Result

Clone Name	bast70h09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LOX5_RAT (P12527) Arachidonate 5-lipoxygenase (EC 1.13.11.34) (5...	35	0.057
2	LOX5_MOUSE (P48999) Arachidonate 5-lipoxygenase (EC 1.13.11.34) ...	33	0.13
3	LOX5_MESAU (P51399) Arachidonate 5-lipoxygenase (EC 1.13.11.34) ...	33	0.13
4	LOX5_HUMAN (P09917) Arachidonate 5-lipoxygenase (EC 1.13.11.34) ...	33	0.16
5	AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding f...	32	0.28
6	IF2_DESVH (Q72ER1) Translation initiation factor IF-2	32	0.28
7	KPC2_APLCA (Q16975) Calcium-independent protein kinase C (EC 2.7...	31	0.82
8	PKDRE_MOUSE (Q9Z0T6) Polycystic kidney disease and receptor for ...	31	0.82
9	ANTR1_MOUSE (Q9CZ52) Anthrax toxin receptor 1 precursor (Tumor e...	30	1.1
10	FMN1B_MOUSE (Q05859) Formin-1 isoform IV (Limb deformity protein)	30	1.1
11	FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity ...	30	1.1
12	PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein	30	1.1
13	YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I	30	1.8
14	ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor e...	30	1.8
15	RD23C_ARATH (Q84L31) Putative DNA repair protein RAD23-3 (RAD23-...	30	1.8
16	EXTN_DAUCA (P06599) Extensin precursor	30	1.8
17	SC24A_HUMAN (O95486) Protein transport protein Sec24A (SEC24-rel...	30	1.8
18	FTSKL_DEIRA (Q9RXB5) Hypothetical ftsK-like protein DR0400	29	2.4
19	RTN4_RAT (Q9JK11) Reticulon-4 (Neurite outgrowth inhibitor) (Nog...	29	2.4
20	CYTSA_XENTR (Q2KN96) Cytospin-A	29	2.4
21	POLR_TYMV (P10358) RNA replicase polyprotein (EC 2.7.7.48)	29	2.4
22	FMN_CHICK (Q05858) Formin (Limb deformity protein)	29	2.4
23	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	29	3.1
24	ENV_FRSFB (P31793) Env polyprotein precursor [Contains: Coat pro...	29	3.1
25	GAG_FSVST (P03338) Gag polyprotein [Contains: Core protein p15; ...	29	3.1
26	GAG_FLV (P10262) Gag polyprotein [Contains: Core protein p15; Co...	29	3.1
27	INO80_ASPFU (Q4WTV7) Putative DNA helicase ino80 (EC 3.6.1.-)	29	3.1
28	GAG_FSVHZ (P04322) Gag polyprotein [Contains: Core protein p15; ...	29	3.1
29	APG_ARATH (P40602) Anter-specific proline-rich protein APG precu...	29	3.1
30	Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 in...	29	3.1
31	LAS17_YEAST (Q12446) Proline-rich protein LAS17	28	4.1
32	104K_THEAN (Q4U9M9) 104 kDa microneme-rhoptry antigen precursor ...	28	4.1
33	POLR_TYMVC (P28477) RNA replicase polyprotein (EC 2.7.7.48)	28	4.1
34	GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H...	28	4.1
35	ADH5_YEAST (P38113) Alcohol dehydrogenase 5 (EC 1.1.1.1) (Alcoho...	28	5.3
36	ADH5_SACPS (Q6XQ67) Alcohol dehydrogenase 5 (EC 1.1.1.1) (Alcoho...	28	5.3
37	ISPE_SYNJB (Q2JLP6) 4-diphosphocytidyl-2-C-methyl-D-erythritol k...	28	5.3
38	ISPE_BACCR (Q81JA2) 4-diphosphocytidyl-2-C-methyl-D-erythritol k...	28	5.3
39	RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif pro...	28	5.3
40	RADC_ACIAD (Q6F7Z8) DNA repair protein radC homolog	28	5.3
41	ENV1_MOUSE (P10404) Retrovirus-related Env polyprotein precursor...	28	5.3
42	GAG_FSVGA (P03337) Gag polyprotein [Contains: Core protein p15; ...	28	5.3
43	MURD_DESVH (Q728U6) UDP-N-acetylmuramoylalanine--D-glutamate lig...	28	5.3
44	ENV_RMCFV (P06445) Env polyprotein precursor (Coat polyprotein) ...	28	5.3
45	CCPA_ACEXY (P37697) Cellulose-complementing protein	28	5.3
46	SECA_RHOCA (P52966) Preprotein translocase secA subunit	28	6.9
47	NO75_LUPLU (Q06841) Early nodulin 75 protein (N-75) (NGM-75) (Fr...	28	6.9
48	WBS14_HUMAN (Q9NP71) Williams-Beuren syndrome chromosome region ...	28	6.9
49	SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calciu...	28	6.9
50	RAB33_CAEEL (Q20365) Ras-related protein Rab-33	28	6.9
51	M4K1_MOUSE (P70218) Mitogen-activated protein kinase kinase kina...	28	6.9
52	RIN3_HUMAN (Q8TB24) Ras and Rab interactor 3 (Ras interaction/in...	28	6.9
53	EPS8_HUMAN (Q12929) Epidermal growth factor receptor kinase subs...	28	6.9
54	VGLL2_MOUSE (Q8BGW8) Transcription cofactor vestigial-like prote...	28	6.9
55	VP61_NPVAC (Q03209) 61 kDa protein	27	9.0
56	PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakar...	27	9.0
57	GLIS1_HUMAN (Q8NBF1) Zinc finger protein GLIS1 (GLI-similar 1)	27	9.0
58	PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS5...	27	9.0
59	PALA_CRYNE (Q5KEK0) pH-response regulator protein palA/RIM20	27	9.0
60	FIP1_PONPY (Q5RAA7) Pre-mRNA 3'-end-processing factor FIP1 (FIP1...	27	9.0
61	FIP1_MOUSE (Q9D824) Pre-mRNA 3'-end-processing factor FIP1 (FIP1...	27	9.0
62	RTN4_MOUSE (Q99P72) Reticulon-4 (Neurite outgrowth inhibitor) (N...	27	9.0
63	RPC1_TRYBB (P08968) DNA-directed RNA polymerase III largest subu...	27	9.0
64	PKDRE_HUMAN (Q9NTG1) Polycystic kidney disease and receptor for ...	27	9.0
65	AFAD_RAT (O35889) Afadin (Af-6 protein)	27	9.0
66	ISPE_BACHK (Q6HPX2) 4-diphosphocytidyl-2-C-methyl-D-erythritol k...	27	9.0
67	ISPE_BACCZ (Q63HI8) 4-diphosphocytidyl-2-C-methyl-D-erythritol k...	27	9.0
68	ISPE_BACC1 (Q73FG3) 4-diphosphocytidyl-2-C-methyl-D-erythritol k...	27	9.0
69	ISPE_BACAN (Q81VZ6) 4-diphosphocytidyl-2-C-methyl-D-erythritol k...	27	9.0
70	EFR1_MACFA (P61556) ERV-FRD provirus ancestral Env polyprotein p...	27	9.0
71	EFR1_HYLML (P61555) ERV-FRD provirus ancestral Env polyprotein p...	27	9.0
72	IF2_RALEJ (Q46ZP1) Translation initiation factor IF-2	27	9.0
73	RCOR2_BRARE (Q6P116) REST corepressor 2	27	9.0
74	ISPE_SYNJA (Q2JQU4) 4-diphosphocytidyl-2-C-methyl-D-erythritol k...	27	9.0
75	GAG_MLVRD (P11269) Gag polyprotein [Contains: Core protein p15; ...	27	9.0
76	WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family mem...	27	9.0
77	ENV_RSFFV (P03389) Env polyprotein precursor (Coat polyprotein) ...	27	9.0
78	ENAH_HUMAN (Q8N8S7) Protein enabled homolog	27	9.0
79	CIC_MOUSE (Q924A2) Protein capicua homolog	27	9.0
80	ADH3_YEAST (P07246) Alcohol dehydrogenase III, mitochondrial pre...	27	9.0
81	YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear pro...	27	9.0
82	TAOK2_MOUSE (Q6ZQ29) Serine/threonine-protein kinase TAO2 (EC 2....	27	9.0
83	ENV_MCFF3 (P03388) Env polyprotein precursor (Coat polyprotein) ...	27	9.0

>LOX5_RAT (P12527) Arachidonate 5-lipoxygenase (EC 1.13.11.34)|
           (5-lipoxygenase) (5-LO)
          Length = 672

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +2

Query: 155 YTVYVRTGSIWKGGTDSAIGVTLLGSDGKGIR-IGDLAKWGGMMGAGHDYYE 307
           YTV V TGS W  GTD  I ++L+GS G   + + D A +      G D Y+
Sbjct: 3   YTVTVATGSQWFAGTDDYIYLSLIGSAGCSEKHLLDKAFYNDFERGGRDSYD 54

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>LOX5_MOUSE (P48999) Arachidonate 5-lipoxygenase (EC 1.13.11.34)|
           (5-lipoxygenase) (5-LO)
          Length = 673

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +2

Query: 155 YTVYVRTGSIWKGGTDSAIGVTLLGSDG 238
           YTV V TGS W  GTD  I ++L+GS G
Sbjct: 3   YTVTVATGSQWFAGTDDYIYLSLIGSAG 30

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>LOX5_MESAU (P51399) Arachidonate 5-lipoxygenase (EC 1.13.11.34)|
           (5-lipoxygenase) (5-LO)
          Length = 672

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +2

Query: 155 YTVYVRTGSIWKGGTDSAIGVTLLGSDG 238
           YTV V TGS W  GTD  I ++L+GS G
Sbjct: 3   YTVTVATGSQWFAGTDDYIYLSLIGSAG 30

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>LOX5_HUMAN (P09917) Arachidonate 5-lipoxygenase (EC 1.13.11.34)|
           (5-lipoxygenase) (5-LO)
          Length = 673

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +2

Query: 155 YTVYVRTGSIWKGGTDSAIGVTLLGSDG 238
           YTV V TGS W  GTD  I ++L+GS G
Sbjct: 3   YTVTVATGSQWFAGTDDYIYLSLVGSAG 30

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>AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding family B member|
           1-interacting protein (APBB1-interacting protein 1)
          Length = 646

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 21/63 (33%), Positives = 26/63 (41%)
 Frame = -3

Query: 291 PAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSDKRLPRP 112
           P P  PP  A  P     P  PS V+   ES+PP   DPV +        + +    P P
Sbjct: 529 PPPPPPPEIADLPPDFLPPPPPSFVSHGGESLPPPPPDPVASLPPPPPAFTSAGGAPPPP 588

Query: 111 PAP 103
           P P
Sbjct: 589 PPP 591

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>IF2_DESVH (Q72ER1) Translation initiation factor IF-2|
          Length = 1079

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 23/64 (35%), Positives = 32/64 (50%)
 Frame = -2

Query: 367 PARRVLHARPATAEDVEVAALVIVVAGAHHAAPFRQVTDPDALAVRAQQRHTDRRVRPAL 188
           P  +V+ A PA     E  A+   V     AAP + V +P++   +A +  T R VRPA 
Sbjct: 151 PVAKVVEAAPAETPAPEAPAVKATVTA--EAAPAKTV-EPESERPQADKPATARVVRPAT 207

Query: 187 PDRS 176
           PD S
Sbjct: 208 PDAS 211

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>KPC2_APLCA (Q16975) Calcium-independent protein kinase C (EC 2.7.11.13) (APL|
           II)
          Length = 743

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
 Frame = -2

Query: 391 GTVGCDVRPARRVL-----HARPATAEDVEVAAL---VIVVAGAHHAAPFRQVTDPDALA 236
           G  G  +RP  + L     H  P  +  +   +L   + V+  +  A P       D+L 
Sbjct: 312 GISGDKLRPKTKKLSISESHESPNKSSPMHERSLSSPIPVIQDSDEAQPGEMGLPSDSLP 371

Query: 235 VRAQQRHTDRRVRPALPDRSRPHVHRV 155
           V A   H   R R    DRSR H  R+
Sbjct: 372 VNASNEHQGSRTRSPSSDRSRSHHSRI 398

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>PKDRE_MOUSE (Q9Z0T6) Polycystic kidney disease and receptor for egg jelly-related|
            protein precursor (PKD and REJ homolog)
          Length = 2126

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 131  SDPEQQCVYTVYVRTGSIWKGGTDSAIGVTLLGSDG 238
            +DP     Y V + TGS W  GT + + + L+G++G
Sbjct: 1108 NDPFDTLCYLVTIFTGSRWGSGTRANVFIQLMGTEG 1143

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>ANTR1_MOUSE (Q9CZ52) Anthrax toxin receptor 1 precursor (Tumor endothelial|
           marker 8)
          Length = 562

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 291 PAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDP 175
           PAP  PP    +P   P+PS PS++ P  ++ PP +  P
Sbjct: 515 PAPHCPPPAPSAPTP-PIPSPPSTLPPPPQAPPPNRAPP 552

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>FMN1B_MOUSE (Q05859) Formin-1 isoform IV (Limb deformity protein)|
          Length = 1206

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 26/79 (32%), Positives = 31/79 (39%)
 Frame = -3

Query: 339 PRPLKMSRLPRS**SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTYT 160
           P P  +  LP      PAP +PP    SP   P P  P+ V P ++  PP    P     
Sbjct: 663 PLPPGLGPLP------PAPPIPPVCPVSPPPPPPPPPPTPVPP-SDGPPPPPPPPPPLPN 715

Query: 159 VYTHCCSGSDKRLPRPPAP 103
           V     SG     P PP P
Sbjct: 716 VLALPNSGGPPPPPPPPPP 734

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>FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity protein)|
          Length = 1468

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 26/79 (32%), Positives = 31/79 (39%)
 Frame = -3

Query: 339  PRPLKMSRLPRS**SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTYT 160
            P P  +  LP      PAP +PP    SP   P P  P+ V P ++  PP    P     
Sbjct: 889  PLPPGLGPLP------PAPPIPPVCPVSPPPPPPPPPPTPVPP-SDGPPPPPPPPPPLPN 941

Query: 159  VYTHCCSGSDKRLPRPPAP 103
            V     SG     P PP P
Sbjct: 942  VLALPNSGGPPPPPPPPPP 960

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>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein|
          Length = 346

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
 Frame = -3

Query: 351 SMHGPRPLKMSRLPRS**SWPAPIM-PPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDP 175
           S HGP+P               PI+ PPH  R PI  P P      TP     PPF   P
Sbjct: 96  SHHGPKP---------------PIVKPPHVPRPPIVHPPPIVSPPSTPKPPKTPPFTPKP 140

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>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I|
          Length = 1794

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 29/96 (30%), Positives = 42/96 (43%)
 Frame = -3

Query: 390  APSDVTFAQHGACSMHGPRPLKMSRLPRS**SWPAPIMPPHFARSPIRMPLPSEPSSVTP 211
            AP  VT A   + +   P P+  S+LP +  + P P M P  A+ P     PS  +  T 
Sbjct: 1462 APGMVTNAPAPSSAPAPPAPV--SQLPPAVPNVPVPSMIPSVAQQP-----PSSVAPATA 1514

Query: 210  IAESVPPFQIDPVRTYTVYTHCCSGSDKRLPRPPAP 103
             + ++PP Q       + + H  S      P PPAP
Sbjct: 1515 PSSTLPPSQ-------SSFAHVPS------PAPPAP 1537

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>ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor endothelial|
           marker 8)
          Length = 564

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 291 PAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDP 175
           PAP  PP    +P   P+PS PS++ P  ++ PP +  P
Sbjct: 517 PAPHCPPPPPSAPTP-PIPSPPSTLPPPPQAPPPNRAPP 554

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>RD23C_ARATH (Q84L31) Putative DNA repair protein RAD23-3 (RAD23-like protein 3)|
           (AtRAD23-3)
          Length = 419

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 291 PAPIMPPHFARSPIRMPLPSEPSSVTPIAESVP 193
           PAP  PP  A +P   P+ +  +  TPI E VP
Sbjct: 120 PAPTRPPPPAPTPTPAPVAATETVTTPIPEPVP 152



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 291 PAPIMPPHFARSPIRMPLPSEPSSVTPIAESVP 193
           PAP+       +PI  P+P+  SS TP  +S P
Sbjct: 134 PAPVAATETVTTPIPEPVPATISSSTPAPDSAP 166

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>EXTN_DAUCA (P06599) Extensin precursor|
          Length = 306

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/58 (27%), Positives = 23/58 (39%)
 Frame = -3

Query: 276 PPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSDKRLPRPPAP 103
           PP  + +P+       P   TP+ +S PP +  P     VY +         P PP P
Sbjct: 210 PPKHSPAPVHHYKYKSPPPPTPVYKSPPPPEHSPPPPTPVYKYKSPPPPMHSPPPPTP 267

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>SC24A_HUMAN (O95486) Protein transport protein Sec24A (SEC24-related protein A)|
           (Fragment)
          Length = 1078

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -3

Query: 297 SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPP--FQIDPVRTYTVYTHCCSGSDK 127
           S PAP MP   +++P   P+PS  SS  P A   PP  +Q +   T +   HC   S +
Sbjct: 87  SGPAPRMPLPASQNPATTPMPS--SSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQ 143

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>FTSKL_DEIRA (Q9RXB5) Hypothetical ftsK-like protein DR0400|
          Length = 980

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
 Frame = -2

Query: 376 DVRPARRVLHARPATAEDVEVAALVIVVAGAHHAAPFRQVTD----PDALAVRAQQRHTD 209
           D+ P   V  ARPA +  V  AA V  +     AAP R  T     PD  A  A+ R   
Sbjct: 296 DLTPVSPVAPARPAPSPPVYDAAAVPALDIDFSAAPRRSRTPAEQMPDPFARAARVRSAR 355

Query: 208 RRVRPALP 185
           R   P +P
Sbjct: 356 RTTTPLVP 363

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>RTN4_RAT (Q9JK11) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)|
           (Foocen) (Glut4 vesicle 20 kDa protein)
          Length = 1163

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 15/66 (22%)
 Frame = -3

Query: 342 GPRPLKMSRLPRS**SW------PAPIMPPHFARSPIRM---------PLPSEPSSVTPI 208
           GP P      P    SW      PAP +PP  A  P ++         P P  P+  +P+
Sbjct: 92  GPLPAAPPAAPERQPSWERSPAAPAPSLPPAAAVLPSKLPEDDEPPARPPPPPPAGASPL 151

Query: 207 AESVPP 190
           AE   P
Sbjct: 152 AEPAAP 157



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 291 PAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTY 163
           P+P++P     +P+   LPS  +SV  +  SV P +  P  +Y
Sbjct: 584 PSPVLPDIVMEAPLNSLLPSAGASV--VQPSVSPLEAPPPVSY 624

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>CYTSA_XENTR (Q2KN96) Cytospin-A|
          Length = 1101

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
 Frame = -3

Query: 324  MSRLPRS**SWPAPIM-PPHFARSPIRMPLPSEPSSVTP----IAESVPPFQIDPVRTYT 160
            +SR P S    P+P+  PP  A SP++    S P SV      ++E  P +   PV+ + 
Sbjct: 844  ISRTPLS----PSPMKTPPAAAVSPMQRHSISGPISVAKSLPGLSEKRPSYAEIPVQEHM 899

Query: 159  VYTHCCSGSDKRLPRPPA 106
            + +   S S   LPR PA
Sbjct: 900  LRSSSSSRSAASLPRVPA 917

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>POLR_TYMV (P10358) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1844

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = -3

Query: 279 MPPHFARSPIRMPLP--SEPSSVTPIAESVPPFQIDPV-RTYTVYTHCCSGSDKRLPRPP 109
           +PP FA + +  P P  S P +  P   + PP  I+P  RT+         S    P PP
Sbjct: 592 LPPAFASTFVPRPPPAASSPGAQPPTTTAAPPTPIEPTQRTHQNSDLALESSTSTEPPPP 651

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>FMN_CHICK (Q05858) Formin (Limb deformity protein)|
          Length = 1213

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
 Frame = -3

Query: 291 PAPIMPPHFARS------PIRMPLPSEPSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSD 130
           P P  PP F+ S      P   PLP+ P+SVT      P F   P     +   C    D
Sbjct: 664 PPPPPPPPFSDSSLPGLVPPPPPLPTGPTSVT------PHFAFGPPLPPQLSEGC---RD 714

Query: 129 KRLPRPPAP 103
            + P PPAP
Sbjct: 715 FQAPAPPAP 723

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -3

Query: 291 PAPIM-PPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTY 163
           P+PI  PP  A SP   P P+   S  P A S PP    P  TY
Sbjct: 294 PSPIYSPPPPAYSPSPPPTPTPTFSPPPPAYSPPPTYSPPPPTY 337

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>ENV_FRSFB (P31793) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E]
          Length = 356

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = -3

Query: 342 GPRPLKMSRLPRS**SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQ 184
           GP P+   +LP S    PA IM P       R P P  P + + + E+ PP Q
Sbjct: 234 GPNPVISDQLPPS---RPAQIMLP-------RPPQPPPPGTASIVPETAPPSQ 276

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>GAG_FSVST (P03338) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30]
          Length = 371

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 297 SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPP 190
           SW  P +PP    +P+  PL  +PS+  P+  S+ P
Sbjct: 169 SWVRPFLPPPKPPTPLPQPLSPQPSA--PLTSSLYP 202

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>GAG_FLV (P10262) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30; Core protein p10]
          Length = 580

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 297 SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPP 190
           SW  P +PP    +P+  PL  +PS+  P+  S+ P
Sbjct: 169 SWVRPFLPPPKPPTPLPQPLSPQPSA--PLTSSLYP 202

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>INO80_ASPFU (Q4WTV7) Putative DNA helicase ino80 (EC 3.6.1.-)|
          Length = 1708

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
 Frame = -3

Query: 288 APIMPPHFA------RSPIRMPLPSE-PSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSD 130
           AP  PP FA      RSP     PS  P+++ P+    PP    P  +    TH  +G+ 
Sbjct: 41  APQTPPAFAPQPSLSRSPHYSHAPSPLPATLPPLNGGAPPPGHHPEPSSQYQTHSSAGTP 100

Query: 129 K-RLPRP 112
           +  LPRP
Sbjct: 101 QFSLPRP 107

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>GAG_FSVHZ (P04322) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30] (Fragment)
          Length = 414

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 297 SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPP 190
           SW  P +PP    +P+  PL  +PS+  P+  S+ P
Sbjct: 169 SWVRPFLPPPKPPTPLPQPLSPQPSA--PLTSSLYP 202

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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 25/85 (29%), Positives = 30/85 (35%)
 Frame = -3

Query: 357 ACSMHGPRPLKMSRLPRS**SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQID 178
           AC    P+P      P      P P  PP    +P  +P PS P    P  + VPP    
Sbjct: 124 ACPPTPPKPQPKPAPPPE----PKPAPPP----APKPVPCPSPPKPPAPTPKPVPPHGPP 175

Query: 177 PVRTYTVYTHCCSGSDKRLPRPPAP 103
           P           + S K  P PP P
Sbjct: 176 P---KPAPAPTPAPSPKPAPSPPKP 197



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/63 (30%), Positives = 25/63 (39%)
 Frame = -3

Query: 291 PAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSDKRLPRP 112
           P P+ PP  +  P+  P PS   S  P  +  PP    P       + C S   K  P+P
Sbjct: 67  PKPVAPPGPSSKPVAPPGPSPCPSPPPKPQPKPPPAPSP-------SPCPSPPPKPQPKP 119

Query: 111 PAP 103
             P
Sbjct: 120 VPP 122

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>Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 intergenic|
           region
          Length = 224

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -3

Query: 285 PIMPPHFARSPIRMPLPSEPSSVTPIAESV--PPFQIDPVRTYT 160
           PI+PP    SP  +PLP+ P + TP   S   PP  I P  T T
Sbjct: 38  PIVPP--PTSPPIVPLPTPPPTPTPSPPSPTPPPTPIPPTPTPT 79

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>LAS17_YEAST (Q12446) Proline-rich protein LAS17|
          Length = 633

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -3

Query: 294 WPAPIMPPHFARSP-IRMPLPSEPSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSDKRLP 118
           +P P+    F ++P + +P  + P    P   + P     P+RT T       GS  RLP
Sbjct: 289 FPFPVPQQQFNQAPSMGIPQQNRPLPQLPNRNNRPVPPPPPMRTTT------EGSGVRLP 342

Query: 117 RPPAP 103
            PP P
Sbjct: 343 APPPP 347

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>104K_THEAN (Q4U9M9) 104 kDa microneme-rhoptry antigen precursor (p104)|
          Length = 893

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
 Frame = -3

Query: 285 PIMPPH--FARSPIRMPLPSEPSSVTPIAESV----PPFQIDPVRTYTVYTHCCSGSDKR 124
           P++P    F  +PI  P   +P  + PI ESV         + V+T  +  H  +G  + 
Sbjct: 690 PVLPTDESFTHTPIGEPTAEQPDDIEPIEESVFIKETGILTEEVKTEDI--HSETGEPEE 747

Query: 123 LPRPPAPXXXXXXXXXXXXXAKKETRR 43
             RP +P               K+ RR
Sbjct: 748 PKRPDSPTKHSPKPTGTHPSMPKKRRR 774

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>POLR_TYMVC (P28477) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1844

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = -3

Query: 279 MPPHFARSPIRMPLP--SEPSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSDKRLPRPPA 106
           +PP FA + +  P P  S P +  P   + PP  I+P +     +     S      PP 
Sbjct: 592 LPPAFASTFVPRPPPAASSPGAQPPTTTAAPPTPIEPTQRAHQNSDLALESSTSTEPPPP 651

Query: 105 P 103
           P
Sbjct: 652 P 652

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>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 24/60 (40%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
 Frame = -3

Query: 339 PRPLKMSRLPRS**SWPAPIMPPHFAR---SPIRMPLPSEPSSVTPIAES-VPPFQIDPV 172
           P P   S  P S    PAP  PP  A    SP   P PS PS   P+  S  PP    PV
Sbjct: 104 PSPAPPSPAPPS----PAPPSPPSPAPPSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPPV 159



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 22/63 (34%), Positives = 25/63 (39%)
 Frame = -3

Query: 291 PAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSDKRLPRP 112
           PAP +PP  A      P P  P S  P + S PP    PV            S    P+P
Sbjct: 207 PAPPVPPSPAPPSPPSPAPPSPPSPAPPSPS-PPAPPSPVPPSPAPPSPAPPS----PKP 261

Query: 111 PAP 103
           PAP
Sbjct: 262 PAP 264



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
 Frame = -3

Query: 339 PRPLKMSRLPRS**SWPAPIMPPHFARSPI--RMPLPSEPSSVTPIAESVPPFQIDP 175
           PRP   +  P      P+P  PP     P     P PS PS V P    VPP    P
Sbjct: 276 PRPPFPANTPMP----PSPPSPPPSPAPPTPPTPPSPSPPSPVPPSPAPVPPSPAPP 328

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>ADH5_YEAST (P38113) Alcohol dehydrogenase 5 (EC 1.1.1.1) (Alcohol|
           dehydrogenase V)
          Length = 351

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 191 GGTDSAIGVTLLGSDGKGIRIGDLA--KWGGMMGAGHDYYERGN 316
           GG + A  V  LGS+ KG ++GD A  KW        +Y E GN
Sbjct: 68  GGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGN 111

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>ADH5_SACPS (Q6XQ67) Alcohol dehydrogenase 5 (EC 1.1.1.1) (Alcohol|
           dehydrogenase V)
          Length = 351

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 191 GGTDSAIGVTLLGSDGKGIRIGDLA--KWGGMMGAGHDYYERGN 316
           GG + A  V  LGS+ KG ++GD A  KW        +Y E GN
Sbjct: 68  GGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGN 111

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>ISPE_SYNJB (Q2JLP6) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 311

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +2

Query: 191 GGTDSAIGVTLLGSD---GKGIRIGDLAKWGGMMGAGHDYYERGNLDIFSGRGPCMEHAP 361
           GG+  A  V L+G +   G G+ +G+L      +G+   +  +G   + +GRG  +E   
Sbjct: 101 GGSADAAAV-LVGLNQLWGLGLTVGELQSLAARLGSDIPFCIQGGTQLATGRGEVLEPLA 159

Query: 362 CWANV 376
            W  +
Sbjct: 160 DWEGI 164

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>ISPE_BACCR (Q81JA2) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 289

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
 Frame = +2

Query: 194 GTDSAIGVTLLGSD---GKGIRIGDLAKWGGMMGAGHDYYERGNLDIFSGRGPCMEH--- 355
           G  S    TL G +     G+ I +LA+ G  +G+   +   G   I +GRG  +EH   
Sbjct: 101 GGSSDAAATLRGLNKLWNLGLTIDELAELGAEIGSDVSFCVYGGTAIATGRGEKIEHIKT 160

Query: 356 -APCW 367
              CW
Sbjct: 161 PPSCW 165

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>RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif protein 4)|
          Length = 419

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = -3

Query: 261 RSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSDKRLPRPPAP 103
           R  ++ P+P  P+S   + E +P   +DP   +             LP PPAP
Sbjct: 323 RRAVQPPVPPPPTSTPVVRERLPSNLVDPYERHP------------LPPPPAP 363

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>RADC_ACIAD (Q6F7Z8) DNA repair protein radC homolog|
          Length = 271

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 370 RPARRVLHARPATAEDVEVAALVIVVAGAHHAA 272
           RP  R+LH+ P +  D E+ A+ +      H+A
Sbjct: 28  RPRERLLHSGPESLSDAELLAIFLRTGSKQHSA 60

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>ENV1_MOUSE (P10404) Retrovirus-related Env polyprotein precursor [Contains:|
           Coat protein GP70] (Fragment)
          Length = 313

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = -3

Query: 342 GPRPLKMSRLPRS**SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQ 184
           GP P+   +LP S    P  IM P       R P P  P + + + E+ PP Q
Sbjct: 235 GPNPVITDQLPPS---RPVQIMLP-------RPPQPPPPGAASTVPETAPPSQ 277

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>GAG_FSVGA (P03337) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30]
          Length = 425

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 297 SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPP 190
           SW  P +PP   + P  +P P  P    P+  S+ P
Sbjct: 172 SWVRPFLPP--PKPPTSLPQPLSPQPSAPLTSSLYP 205

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>MURD_DESVH (Q728U6) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 433

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 25/73 (34%), Positives = 28/73 (38%)
 Frame = -2

Query: 382 GCDVRPARRVLHARPATAEDVEVAALVIVVAGAHHAAPFRQVTDPDALAVRAQQRHTDRR 203
           G  VR   R     PAT  +    A V +V GAH AA F      DA  V          
Sbjct: 37  GARVRVLERDAANVPATFAEWAAGAGVEIVCGAHDAAHF-----ADAAVVVPSPGVAVAT 91

Query: 202 VRPALPDRSRPHV 164
           +RP LP    P V
Sbjct: 92  LRPYLPATGGPEV 104

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>ENV_RMCFV (P06445) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Coat protein GP70; Coat protein p12E; Spike protein
           p15E]
          Length = 640

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = -3

Query: 342 GPRPLKMSRLPRS**SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQ 184
           GP P+ + +LP S    P  IM P       R P P  P + + + E+ PP Q
Sbjct: 238 GPNPVIIDQLPPS---RPVQIMLP-------RPPQPPPPGAASIVPETAPPSQ 280

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>CCPA_ACEXY (P37697) Cellulose-complementing protein|
          Length = 353

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
 Frame = -3

Query: 291 PAPIMP--PHFARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSDKRLP 118
           PA  +P  P    +P++   P  P+ V PIAE  PP   DP                  P
Sbjct: 114 PAAAVPAEPPVQEAPVQAA-PVPPAPVPPIAEQAPPAAPDPASVPYANVAAAPVPPDPAP 172

Query: 117 RPPAP 103
             PAP
Sbjct: 173 VTPAP 177

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>SECA_RHOCA (P52966) Preprotein translocase secA subunit|
          Length = 904

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -2

Query: 286 AHHAAPFRQVTDPDALAVRAQQRHTDRRVRPALPDRS 176
           A HAA  ++V +   L V A +RH  RR+   L  RS
Sbjct: 534 AEHAAEKQKVIEAGGLFVLATERHESRRIDNQLRGRS 570

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>NO75_LUPLU (Q06841) Early nodulin 75 protein (N-75) (NGM-75) (Fragment)|
          Length = 434

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = -3

Query: 291 PAPIMPPHFARSPIRMPLPSE-PSSVTPIAESVPPFQIDP 175
           P P+ PP   + PI  P P E P    P  E  PP Q  P
Sbjct: 200 PPPVHPPPDEKPPIEYPPPLEKPPVHEPPYEKPPPAQPPP 239



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/42 (30%), Positives = 15/42 (35%)
 Frame = -3

Query: 291 PAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRT 166
           P P   P     P   P P+ P  V P     PP +  P  T
Sbjct: 17  PPPHEKPPLFEPPFEKPPPAHPPPVHPPPHEKPPIEYPPPHT 58

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>WBS14_HUMAN (Q9NP71) Williams-Beuren syndrome chromosome region 14 protein (WS|
           basic-helix-loop-helix leucine zipper protein) (WS-bHLH)
           (Mlx interactor) (MLX-interacting protein-like)
          Length = 852

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
 Frame = -3

Query: 294 WPAPIMPPHFARSPIRMP--LPSEPSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSDKRL 121
           +P P +PP    SP+  P   P  P SV   A +  P ++ P+     Y+    G    +
Sbjct: 435 FPFPTVPPAPGVSPLPAPAAFPPTPQSVPSPAPTPFPIELLPLG----YSEPAFGPCFSM 490

Query: 120 PR--PPAP 103
           PR  PPAP
Sbjct: 491 PRGKPPAP 498

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>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding|
           protein precursor
          Length = 852

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +1

Query: 178 IDLEGRDGLGDRCDAAGLGRQGHPDR*PGE 267
           I+  G  G      AAGLG  GH  R PGE
Sbjct: 41  INNAGAPGPSGEAAAAGLGHHGHSHRSPGE 70

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>RAB33_CAEEL (Q20365) Ras-related protein Rab-33|
          Length = 307

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = -3

Query: 387 PSDVTFAQHGACSMHGPRPLKMSRLPRS**SWPAPIMPPHFARSPIRMPLPSEPSSVTPI 208
           P ++T A H       P+P   S  P+     P+P +P     +P+R+P P+ P  + P 
Sbjct: 31  PDELTTASH-------PQPTHPSA-PQD----PSPAVPS----TPVRVPYPTAPPPIPPA 74

Query: 207 AESV 196
            E+V
Sbjct: 75  PEAV 78

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>M4K1_MOUSE (P70218) Mitogen-activated protein kinase kinase kinase kinase 1|
           (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 1) (MEK
           kinase kinase 1) (MEKKK 1) (Hematopoietic progenitor
           kinase) (HPK)
          Length = 827

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -3

Query: 243 PLPSEPSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSDKRLPRPPAP 103
           PLP +P   +P  +     + D   +  V   C SG   R PRP  P
Sbjct: 394 PLPPKPKFRSPSDDGSGGIRDDGQLSPGVLVRCASGPPPRTPRPGPP 440

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>RIN3_HUMAN (Q8TB24) Ras and Rab interactor 3 (Ras interaction/interference|
           protein 3)
          Length = 984

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = -3

Query: 291 PAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSDKRLPRP 112
           PAP + PH    P     P++P  +T      P   + P+R   +     S   +++P P
Sbjct: 318 PAPHVTPHAPGPPDH---PNQPPMMTCERLPCPTAGLGPLREEAMKPGAASSPLQQVPAP 374

Query: 111 PAP 103
           P P
Sbjct: 375 PLP 377

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>EPS8_HUMAN (Q12929) Epidermal growth factor receptor kinase substrate 8|
          Length = 822

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = -3

Query: 345 HGPRPLKMSRLPRS**SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQI 181
           +GPRP             PAP  PP    +P  +P+P  PS+  P+  S  P  I
Sbjct: 613 YGPRPADTP---------PAPSPPP----TPAPVPVPLPPSTPAPVPVSKVPANI 654

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>VGLL2_MOUSE (Q8BGW8) Transcription cofactor vestigial-like protein 2 (Vgl-2)|
           (VITO1 protein)
          Length = 322

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -3

Query: 276 PPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTYTVYTHCCSGS 133
           P  F  S  + P+P+   S    A S  PF  DP    T++ H   G+
Sbjct: 142 PASFWNSAYQAPVPAPLGSPLAAAHSELPFATDPYSPATLHGHLHQGA 189

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>VP61_NPVAC (Q03209) 61 kDa protein|
          Length = 543

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -3

Query: 339 PRPLKMSRLPRS**SWPAPIMPPHFARSPIRMPLPSEPSSVTPI 208
           P P  +  +P      P P  PP  +  P   P+P+EP    P+
Sbjct: 186 PPPSPVPNIPA-----PPPPPPPSMSELPPAPPMPTEPQPAAPL 224

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>PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte|
           stimulating factor) (Superficial zone proteoglycan)
           [Contains: Proteoglycan-4 C-terminal part]
          Length = 1404

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = -3

Query: 291 PAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTYT 160
           PAP  P   A +  + P P+ P    P     PP     V T T
Sbjct: 818 PAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPT 861

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>GLIS1_HUMAN (Q8NBF1) Zinc finger protein GLIS1 (GLI-similar 1)|
          Length = 620

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 291 PAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDP 175
           P P+ P   + SP   P P+ PS       S PPFQ  P
Sbjct: 471 PPPLPPSSQSHSPGGQPFPTLPSK-----PSYPPFQSPP 504

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>PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS54 precursor|
          Length = 1901

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +2

Query: 176 GSIWKGGTDSAIGVTLLGSDGKGIRIGDLAKWGGMMGAGHD 298
           G IW GG    +G    G+ G G R   L   GG  GAG D
Sbjct: 209 GLIWGGGGAGGVGGAGGGTGGAGGRAELLFGAGGAGGAGTD 249

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>PALA_CRYNE (Q5KEK0) pH-response regulator protein palA/RIM20|
          Length = 902

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 5/66 (7%)
 Frame = -3

Query: 285 PIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTYTVYTHCCS-----GSDKRL 121
           P  P  F+ SP+R P PS P+            +  P +T +   H  S      S   L
Sbjct: 780 PSAPSSFSSSPVRSPAPSAPAR-----------RESPPKTLSFLPHPSSSAWQPASVDFL 828

Query: 120 PRPPAP 103
           P PP P
Sbjct: 829 PPPPPP 834

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>FIP1_PONPY (Q5RAA7) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
          Length = 588

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = -3

Query: 291 PAPIMPPH--FARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSDKRLP 118
           P P +PP    + +P  +P P  P +V P     PP    P    T+ +   SG D R  
Sbjct: 356 PPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSA 415

Query: 117 R 115
           R
Sbjct: 416 R 416

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>FIP1_MOUSE (Q9D824) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
          Length = 581

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = -3

Query: 291 PAPIMPPH--FARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSDKRLP 118
           P P +PP    + +P  +P P  P +V P     PP    P    T+ +   SG D R  
Sbjct: 347 PPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSA 406

Query: 117 R 115
           R
Sbjct: 407 R 407

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>RTN4_MOUSE (Q99P72) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)|
          Length = 1162

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 13/64 (20%)
 Frame = -3

Query: 342 GPRPLKMSRLPRS**SWP------APIMPPHFARSPIRMP-------LPSEPSSVTPIAE 202
           GP P      P    SW       AP +PP  A  P ++P        P  P+  +P+AE
Sbjct: 90  GPLPAAPPTAPERQPSWERSPAASAPSLPPAAAVLPSKLPEDDEPPARPPAPAGASPLAE 149

Query: 201 SVPP 190
              P
Sbjct: 150 PAAP 153

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>RPC1_TRYBB (P08968) DNA-directed RNA polymerase III largest subunit (EC|
           2.7.7.6)
          Length = 1530

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -2

Query: 307 LVIVVAGAHHAAPFRQVTDPDALAVRAQQRHTDRRVRPALPDRSRPHVHR 158
           L++V +G+  +A    +     +A   QQ  + +R+  A  DRS PH HR
Sbjct: 780 LIMVQSGSKGSA----LNIAQMMACVGQQTVSGKRILDAFQDRSLPHFHR 825

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>PKDRE_HUMAN (Q9NTG1) Polycystic kidney disease and receptor for egg jelly-related|
            protein precursor (PKD and REJ homolog)
          Length = 2253

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 131  SDPEQQCVYTVYVRTGSIWKGGTDSAIGVTLLGS 232
            +DP     Y V + TGS W  GT + + V L G+
Sbjct: 1224 NDPYDNLCYLVTIFTGSRWGSGTRANVFVQLRGT 1257

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>AFAD_RAT (O35889) Afadin (Af-6 protein)|
          Length = 1829

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 24/87 (27%), Positives = 30/87 (34%), Gaps = 1/87 (1%)
 Frame = -3

Query: 291  PAPIMPPHFARS-PIRMPLPSEPSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSDKRLPR 115
            PA ++P   A S PIR  LP  P          PP           YT    G    LP 
Sbjct: 1353 PAAVLPTPVAVSQPIRTDLPPPPPP--------PPAH---------YTSDFDGISMDLPL 1395

Query: 114  PPAPXXXXXXXXXXXXXAKKETRRRHE 34
            PP P             A+++ R  H+
Sbjct: 1396 PPPPANQAAPQSAQVAAAERKKREEHQ 1422

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>ISPE_BACHK (Q6HPX2) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 292

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
 Frame = +2

Query: 194 GTDSAIGVTLLGSD---GKGIRIGDLAKWGGMMGAGHDYYERGNLDIFSGRGPCMEH--- 355
           G  S    TL G +     G+ I  LA+ G  +G+   +   G   I +GRG  +EH   
Sbjct: 104 GGSSDAAATLRGLNKLWNLGLTIDQLAELGAEIGSDVSFCVYGGTAIATGRGEQIEHIKT 163

Query: 356 -APCW 367
              CW
Sbjct: 164 PPSCW 168

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>ISPE_BACCZ (Q63HI8) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 292

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
 Frame = +2

Query: 194 GTDSAIGVTLLGSD---GKGIRIGDLAKWGGMMGAGHDYYERGNLDIFSGRGPCMEH--- 355
           G  S    TL G +     G+ I  LA+ G  +G+   +   G   I +GRG  +EH   
Sbjct: 104 GGSSDAAATLRGLNKLWNLGLTIDQLAELGAEIGSDVSFCVYGGTAIATGRGEQIEHIKT 163

Query: 356 -APCW 367
              CW
Sbjct: 164 PPSCW 168

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>ISPE_BACC1 (Q73FG3) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 289

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
 Frame = +2

Query: 194 GTDSAIGVTLLGSD---GKGIRIGDLAKWGGMMGAGHDYYERGNLDIFSGRGPCMEH--- 355
           G  S    TL G +     G+ I  LA+ G  +G+   +   G   I +GRG  +EH   
Sbjct: 101 GGSSDAAATLRGLNKLWNLGLTIDQLAELGAEIGSDVSFCVYGGTAIATGRGEQIEHIKT 160

Query: 356 -APCW 367
              CW
Sbjct: 161 PPSCW 165

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>ISPE_BACAN (Q81VZ6) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 289

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
 Frame = +2

Query: 194 GTDSAIGVTLLGSD---GKGIRIGDLAKWGGMMGAGHDYYERGNLDIFSGRGPCMEH--- 355
           G  S    TL G +     G+ I  LA+ G  +G+   +   G   I +GRG  +EH   
Sbjct: 101 GGSSDAAATLRGLNKLWNLGLTIDQLAELGAEIGSDVSFCVYGGTAIATGRGEQIEHIKT 160

Query: 356 -APCW 367
              CW
Sbjct: 161 PPSCW 165

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>EFR1_MACFA (P61556) ERV-FRD provirus ancestral Env polyprotein precursor|
           (Envelope polyprotein) (Syncytin-2) [Contains: Surface
           protein (SU); Transmembrane protein (TM)]
          Length = 537

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 228 PSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSDKRLPRPP 109
           PS+V  +  +V P Q    +TY  YTH       R P+PP
Sbjct: 141 PSTVCNVTFTVDPNQ----QTYQTYTHNQFRHQPRFPKPP 176

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>EFR1_HYLML (P61555) ERV-FRD provirus ancestral Env polyprotein precursor|
           (Envelope polyprotein) (Syncytin-2) [Contains: Surface
           protein (SU); Transmembrane protein (TM)]
          Length = 538

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 228 PSSVTPIAESVPPFQIDPVRTYTVYTHCCSGSDKRLPRPP 109
           PS+V  +  +V P Q    +TY  YTH       R P+PP
Sbjct: 141 PSTVCNVTFTVDPNQ----QTYQTYTHNQFRHQPRFPKPP 176

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>IF2_RALEJ (Q46ZP1) Translation initiation factor IF-2|
          Length = 966

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -2

Query: 325 DVEVAALVIVVAGAHHAAPFRQVTDPDALAVRAQQRHTDRRVRPALP 185
           D E A +V+   G  H A   ++ DP+AL V   + HTD    P  P
Sbjct: 425 DQETAMIVVEEMG--HKAFAAKLDDPEALLVVDGEEHTDAEQLPRPP 469

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>RCOR2_BRARE (Q6P116) REST corepressor 2|
          Length = 536

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/71 (28%), Positives = 26/71 (36%)
 Frame = -3

Query: 360 GACSMHGPRPLKMSRLPRS**SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQI 181
           G    H   PL  S    S     A   PP     P+  P P  PS+   +    PP Q 
Sbjct: 420 GISPPHSDSPLPSSEGSASGNHSSAQSSPPLTQPPPLLRPAP--PSAPPSLLRQPPPLQT 477

Query: 180 DPVRTYTVYTH 148
            P++  T + H
Sbjct: 478 RPLQNRTPHNH 488

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>ISPE_SYNJA (Q2JQU4) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 309

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +2

Query: 191 GGTDSAIGVTLLGSD---GKGIRIGDLAKWGGMMGAGHDYYERGNLDIFSGRGPCMEHAP 361
           GG+  A  V L+G +   G G+ +G+L      +G+   +  +G   + +GRG  ++   
Sbjct: 101 GGSADAAAV-LVGLNQLWGLGLTVGELQSLAARLGSDIPFCVQGGTQLATGRGEVLQPLA 159

Query: 362 CWANV 376
            W  +
Sbjct: 160 DWEGI 164

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>GAG_MLVRD (P11269) Gag polyprotein [Contains: Core protein p15; Inner coat|
           protein p12; Core shell protein p30; Nucleoprotein p10]
          Length = 536

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 297 SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPP 190
           SW  P + P  + SP    LPS PS+  P   ++ P
Sbjct: 94  SWVKPFVSPKLSLSPTAPILPSGPSTQPPPRSALYP 129

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>WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family member 2|
           (WASP-family protein member 2) (WAVE-2 protein)
          Length = 497

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 24/79 (30%), Positives = 30/79 (37%)
 Frame = -3

Query: 339 PRPLKMSRLPRS**SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQIDPVRTYT 160
           P P   S  P    + P P  PP  A  P+  P  S+PS   P     PP    P   + 
Sbjct: 346 PPPSPPSFPPHPDFAAPPPPPPPPAADYPMPPPPLSQPSGGAPPPPPPPPPPGPPPLPF- 404

Query: 159 VYTHCCSGSDKRLPRPPAP 103
                 SG+D +   PP P
Sbjct: 405 ------SGADGQPAAPPPP 417

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>ENV_RSFFV (P03389) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Coat protein GP70; Spike protein p15E]
          Length = 408

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = -3

Query: 342 GPRPLKMSRLPRS**SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQ 184
           GP P+   +LP S    P  IM P       R P P  P + + + E+ PP Q
Sbjct: 235 GPNPVITDQLPPS---RPVQIMLP-------RPPQPPPPGAASIVPETAPPSQ 277

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>ENAH_HUMAN (Q8N8S7) Protein enabled homolog|
          Length = 591

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 291 PAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPP 190
           P P +PP  A++ + +P P  P    P+  + PP
Sbjct: 315 PPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPP 348

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>CIC_MOUSE (Q924A2) Protein capicua homolog|
          Length = 1606

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = -3

Query: 291  PAPIMPPHFARSPIRMPLPSEPSSVTPIAESV-PPFQIDPVRTYTVYTHCCSGSDKRLPR 115
            P+P +PP    S   +     P S  P +  + PP Q  P   YTV T     +   LP+
Sbjct: 1074 PSPQLPPACTASGGPVITAFYPGSPAPTSAPLGPPSQAPPSLVYTVATSTTPPAATILPK 1133

Query: 114  -PPA 106
             PPA
Sbjct: 1134 GPPA 1137

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>ADH3_YEAST (P07246) Alcohol dehydrogenase III, mitochondrial precursor (EC|
           1.1.1.1) (YADH-3)
          Length = 375

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = +2

Query: 191 GGTDSAIGVTLLGSDGKGIRIGDLA--KW 271
           GG + A  V  LGS+ KG ++GDLA  KW
Sbjct: 92  GGHEGAGVVVKLGSNVKGWKVGDLAGIKW 120

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>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)|
           (ZAP113)
          Length = 1951

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 9/72 (12%)
 Frame = -3

Query: 291 PAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPF---------QIDPVRTYTVYTHCCS 139
           P P+ PP     P   P P   SS TP A S   F         Q+  ++        C 
Sbjct: 16  PPPVPPPPPVALPEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQMHQKQMQCV 75

Query: 138 GSDKRLPRPPAP 103
                LP PP P
Sbjct: 76  LQPHHLPPPPLP 87

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>TAOK2_MOUSE (Q6ZQ29) Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand|
            and one amino acid protein 2)
          Length = 1055

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
 Frame = -3

Query: 339  PRPLKMSR-LPRS**SW----PAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPP 190
            P P   SR +PRS   W    P P MPP   R P  +  P  P+ + P  +S  P
Sbjct: 944  PAPAWPSRPVPRSGAHWSHGPPPPGMPPPAWRQPALLAPPGPPNWLGPPTQSGTP 998

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>ENV_MCFF3 (P03388) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Coat protein GP70; Spike protein p15E; R protein]
          Length = 640

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = -3

Query: 342 GPRPLKMSRLPRS**SWPAPIMPPHFARSPIRMPLPSEPSSVTPIAESVPPFQ 184
           GP P+   +LP S    P  IM P       R P P  P + + + E+ PP Q
Sbjct: 235 GPNPVITDQLPPS---RPVQIMLP-------RPPQPPPPGAASIVPETAPPSQ 277


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,821,760
Number of Sequences: 219361
Number of extensions: 853369
Number of successful extensions: 3841
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 3441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3801
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result