ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast70h09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472724.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 582 Score = 192 bits (97), Expect = 6e-46 Identities = 217/257 (84%) Strand = Plus / Plus Query: 131 tcggacccggagcaacagtgtgtgtacacggtgtacgtgcggacgggatcgatctggaag 190 |||||||||||| | |||| ||||||||| | |||||||||||||| ||||||||||| Sbjct: 115 tcggacccggagaacaagtgcgtgtacacgatatacgtgcggacggggacgatctggaag 174 Query: 191 ggcgggacggactcggcgatcggtgtgacgctgctgggctcggacggcaagggcatccgg 250 |||||||||||||||| |||||| ||||||||||||||| | |||||| || | ||| Sbjct: 175 ggcgggacggactcggtgatcggcgtgacgctgctgggcgccgacggctccggggtgcgg 234 Query: 251 atcggtgacctggcgaaatggggcggcatgatgggcgccggccacgactattacgagcgc 310 ||| | ||||||| | ||||||||| | ||||||| |||||||||||| ||||||||| Sbjct: 235 atccgcgacctggagcggtggggcggcctcatgggcgacggccacgactactacgagcgc 294 Query: 311 ggcaacctcgacatcttcagcggtcgcgggccgtgcatggagcacgcgccgtgctgggcg 370 ||||||||||||||||||||||| ||||| || |||||| || ||||||||| || | Sbjct: 295 ggcaacctcgacatcttcagcggccgcggcccctgcatgcgccaggcgccgtgccggatg 354 Query: 371 aacgtcacatccgacgg 387 ||| |||| |||||||| Sbjct: 355 aacctcacctccgacgg 371
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15, complete sequence Length = 143109 Score = 192 bits (97), Expect = 6e-46 Identities = 217/257 (84%) Strand = Plus / Plus Query: 131 tcggacccggagcaacagtgtgtgtacacggtgtacgtgcggacgggatcgatctggaag 190 |||||||||||| | |||| ||||||||| | |||||||||||||| ||||||||||| Sbjct: 141466 tcggacccggagaacaagtgcgtgtacacgatatacgtgcggacggggacgatctggaag 141525 Query: 191 ggcgggacggactcggcgatcggtgtgacgctgctgggctcggacggcaagggcatccgg 250 |||||||||||||||| |||||| ||||||||||||||| | |||||| || | ||| Sbjct: 141526 ggcgggacggactcggtgatcggcgtgacgctgctgggcgccgacggctccggggtgcgg 141585 Query: 251 atcggtgacctggcgaaatggggcggcatgatgggcgccggccacgactattacgagcgc 310 ||| | ||||||| | ||||||||| | ||||||| |||||||||||| ||||||||| Sbjct: 141586 atccgcgacctggagcggtggggcggcctcatgggcgacggccacgactactacgagcgc 141645 Query: 311 ggcaacctcgacatcttcagcggtcgcgggccgtgcatggagcacgcgccgtgctgggcg 370 ||||||||||||||||||||||| ||||| || |||||| || ||||||||| || | Sbjct: 141646 ggcaacctcgacatcttcagcggccgcggcccctgcatgcgccaggcgccgtgccggatg 141705 Query: 371 aacgtcacatccgacgg 387 ||| |||| |||||||| Sbjct: 141706 aacctcacctccgacgg 141722 Score = 75.8 bits (38), Expect = 9e-11 Identities = 59/66 (89%) Strand = Plus / Plus Query: 281 atgggcgccggccacgactattacgagcgcggcaacctcgacatcttcagcggtcgcggg 340 ||||||||||| |||||||| ||||||||||||||| ||||| | |||||||| |||| | Sbjct: 134480 atgggcgccgggcacgactactacgagcgcggcaacgtcgacgtgttcagcgggcgcgcg 134539 Query: 341 ccgtgc 346 |||||| Sbjct: 134540 ccgtgc 134545 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 269 tggggcggcatgatgggcgccggccacgactattacgagcgcggcaacctcgacatcttc 328 ||||||||| | |||| |||||||||||||| | |||||| ||||| ||||||||||| Sbjct: 133251 tggggcggcctcatggcggccggccacgactacttcgagcggagcaacgtcgacatcttc 133310 Query: 329 agcggtcgcgggcc 342 ||||| |||||||| Sbjct: 133311 agcggccgcgggcc 133324 Score = 56.0 bits (28), Expect = 9e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 146 cagtgtgtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggactcg 205 ||||| ||||||||| | |||||| |||||| ||||||||||||| ||| || ||| || Sbjct: 133128 cagtgcgtgtacacgctctacgtggagacgggctcgatctggaaggccggcaccgacgcg 133187 Query: 206 gcgatcgg 213 |||||||| Sbjct: 133188 gcgatcgg 133195 Score = 54.0 bits (27), Expect = 3e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 147 agtgtgtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggactcgg 206 |||| ||||||||| |||||||| ||| || | ||||||||||| ||| |||||| ||| Sbjct: 134346 agtgcgtgtacacgctgtacgtggagaccgggtggatctggaaggccggcacggacgcgg 134405 Query: 207 cgatcgg 213 ||||||| Sbjct: 134406 cgatcgg 134412
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 192 bits (97), Expect = 6e-46 Identities = 217/257 (84%) Strand = Plus / Plus Query: 131 tcggacccggagcaacagtgtgtgtacacggtgtacgtgcggacgggatcgatctggaag 190 |||||||||||| | |||| ||||||||| | |||||||||||||| ||||||||||| Sbjct: 13045 tcggacccggagaacaagtgcgtgtacacgatatacgtgcggacggggacgatctggaag 13104 Query: 191 ggcgggacggactcggcgatcggtgtgacgctgctgggctcggacggcaagggcatccgg 250 |||||||||||||||| |||||| ||||||||||||||| | |||||| || | ||| Sbjct: 13105 ggcgggacggactcggtgatcggcgtgacgctgctgggcgccgacggctccggggtgcgg 13164 Query: 251 atcggtgacctggcgaaatggggcggcatgatgggcgccggccacgactattacgagcgc 310 ||| | ||||||| | ||||||||| | ||||||| |||||||||||| ||||||||| Sbjct: 13165 atccgcgacctggagcggtggggcggcctcatgggcgacggccacgactactacgagcgc 13224 Query: 311 ggcaacctcgacatcttcagcggtcgcgggccgtgcatggagcacgcgccgtgctgggcg 370 ||||||||||||||||||||||| ||||| || |||||| || ||||||||| || | Sbjct: 13225 ggcaacctcgacatcttcagcggccgcggcccctgcatgcgccaggcgccgtgccggatg 13284 Query: 371 aacgtcacatccgacgg 387 ||| |||| |||||||| Sbjct: 13285 aacctcacctccgacgg 13301 Score = 75.8 bits (38), Expect = 9e-11 Identities = 59/66 (89%) Strand = Plus / Plus Query: 281 atgggcgccggccacgactattacgagcgcggcaacctcgacatcttcagcggtcgcggg 340 ||||||||||| |||||||| ||||||||||||||| ||||| | |||||||| |||| | Sbjct: 6059 atgggcgccgggcacgactactacgagcgcggcaacgtcgacgtgttcagcgggcgcgcg 6118 Query: 341 ccgtgc 346 |||||| Sbjct: 6119 ccgtgc 6124 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 269 tggggcggcatgatgggcgccggccacgactattacgagcgcggcaacctcgacatcttc 328 ||||||||| | |||| |||||||||||||| | |||||| ||||| ||||||||||| Sbjct: 4830 tggggcggcctcatggcggccggccacgactacttcgagcggagcaacgtcgacatcttc 4889 Query: 329 agcggtcgcgggcc 342 ||||| |||||||| Sbjct: 4890 agcggccgcgggcc 4903 Score = 56.0 bits (28), Expect = 9e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 146 cagtgtgtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggactcg 205 ||||| ||||||||| | |||||| |||||| ||||||||||||| ||| || ||| || Sbjct: 4707 cagtgcgtgtacacgctctacgtggagacgggctcgatctggaaggccggcaccgacgcg 4766 Query: 206 gcgatcgg 213 |||||||| Sbjct: 4767 gcgatcgg 4774 Score = 54.0 bits (27), Expect = 3e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 147 agtgtgtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggactcgg 206 |||| ||||||||| |||||||| ||| || | ||||||||||| ||| |||||| ||| Sbjct: 5925 agtgcgtgtacacgctgtacgtggagaccgggtggatctggaaggccggcacggacgcgg 5984 Query: 207 cgatcgg 213 ||||||| Sbjct: 5985 cgatcgg 5991
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 192 bits (97), Expect = 6e-46 Identities = 217/257 (84%) Strand = Plus / Plus Query: 131 tcggacccggagcaacagtgtgtgtacacggtgtacgtgcggacgggatcgatctggaag 190 |||||||||||| | |||| ||||||||| | |||||||||||||| ||||||||||| Sbjct: 22804270 tcggacccggagaacaagtgcgtgtacacgatatacgtgcggacggggacgatctggaag 22804329 Query: 191 ggcgggacggactcggcgatcggtgtgacgctgctgggctcggacggcaagggcatccgg 250 |||||||||||||||| |||||| ||||||||||||||| | |||||| || | ||| Sbjct: 22804330 ggcgggacggactcggtgatcggcgtgacgctgctgggcgccgacggctccggggtgcgg 22804389 Query: 251 atcggtgacctggcgaaatggggcggcatgatgggcgccggccacgactattacgagcgc 310 ||| | ||||||| | ||||||||| | ||||||| |||||||||||| ||||||||| Sbjct: 22804390 atccgcgacctggagcggtggggcggcctcatgggcgacggccacgactactacgagcgc 22804449 Query: 311 ggcaacctcgacatcttcagcggtcgcgggccgtgcatggagcacgcgccgtgctgggcg 370 ||||||||||||||||||||||| ||||| || |||||| || ||||||||| || | Sbjct: 22804450 ggcaacctcgacatcttcagcggccgcggcccctgcatgcgccaggcgccgtgccggatg 22804509 Query: 371 aacgtcacatccgacgg 387 ||| |||| |||||||| Sbjct: 22804510 aacctcacctccgacgg 22804526 Score = 75.8 bits (38), Expect = 9e-11 Identities = 59/66 (89%) Strand = Plus / Plus Query: 281 atgggcgccggccacgactattacgagcgcggcaacctcgacatcttcagcggtcgcggg 340 ||||||||||| |||||||| ||||||||||||||| ||||| | |||||||| |||| | Sbjct: 22797284 atgggcgccgggcacgactactacgagcgcggcaacgtcgacgtgttcagcgggcgcgcg 22797343 Query: 341 ccgtgc 346 |||||| Sbjct: 22797344 ccgtgc 22797349 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 269 tggggcggcatgatgggcgccggccacgactattacgagcgcggcaacctcgacatcttc 328 ||||||||| | |||| |||||||||||||| | |||||| ||||| ||||||||||| Sbjct: 22796055 tggggcggcctcatggcggccggccacgactacttcgagcggagcaacgtcgacatcttc 22796114 Query: 329 agcggtcgcgggcc 342 ||||| |||||||| Sbjct: 22796115 agcggccgcgggcc 22796128 Score = 56.0 bits (28), Expect = 9e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 146 cagtgtgtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggactcg 205 ||||| ||||||||| | |||||| |||||| ||||||||||||| ||| || ||| || Sbjct: 22795932 cagtgcgtgtacacgctctacgtggagacgggctcgatctggaaggccggcaccgacgcg 22795991 Query: 206 gcgatcgg 213 |||||||| Sbjct: 22795992 gcgatcgg 22795999 Score = 54.0 bits (27), Expect = 3e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 147 agtgtgtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggactcgg 206 |||| ||||||||| |||||||| ||| || | ||||||||||| ||| |||||| ||| Sbjct: 22797150 agtgcgtgtacacgctgtacgtggagaccgggtggatctggaaggccggcacggacgcgg 22797209 Query: 207 cgatcgg 213 ||||||| Sbjct: 22797210 cgatcgg 22797216
>dbj|AK065178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D12, full insert sequence Length = 895 Score = 192 bits (97), Expect = 6e-46 Identities = 217/257 (84%) Strand = Plus / Plus Query: 131 tcggacccggagcaacagtgtgtgtacacggtgtacgtgcggacgggatcgatctggaag 190 |||||||||||| | |||| ||||||||| | |||||||||||||| ||||||||||| Sbjct: 213 tcggacccggagaacaagtgcgtgtacacgatatacgtgcggacggggacgatctggaag 272 Query: 191 ggcgggacggactcggcgatcggtgtgacgctgctgggctcggacggcaagggcatccgg 250 |||||||||||||||| |||||| ||||||||||||||| | |||||| || | ||| Sbjct: 273 ggcgggacggactcggtgatcggcgtgacgctgctgggcgccgacggctccggggtgcgg 332 Query: 251 atcggtgacctggcgaaatggggcggcatgatgggcgccggccacgactattacgagcgc 310 ||| | ||||||| | ||||||||| | ||||||| |||||||||||| ||||||||| Sbjct: 333 atccgcgacctggagcggtggggcggcctcatgggcgacggccacgactactacgagcgc 392 Query: 311 ggcaacctcgacatcttcagcggtcgcgggccgtgcatggagcacgcgccgtgctgggcg 370 ||||||||||||||||||||||| ||||| || |||||| || ||||||||| || | Sbjct: 393 ggcaacctcgacatcttcagcggccgcggcccctgcatgcgccaggcgccgtgccggatg 452 Query: 371 aacgtcacatccgacgg 387 ||| |||| |||||||| Sbjct: 453 aacctcacctccgacgg 469
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 269 tggggcggcatgatgggcgccggccacgactattacgagcgcggcaacctcgacatcttc 328 ||||||||| |||||||||||||||||||||| |||||||| |||||||| ||| | ||| Sbjct: 6265064 tggggcggcctgatgggcgccggccacgactactacgagcggggcaacctggacgtgttc 6265005 Query: 329 agcggtcgcgggccgtgc 346 ||||| ||||| |||||| Sbjct: 6265004 agcggccgcggcccgtgc 6264987 Score = 44.1 bits (22), Expect = 0.34 Identities = 52/62 (83%) Strand = Plus / Minus Query: 152 gtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggactcggcgatc 211 |||||||| |||| |||| ||||||| || ||||||||||| ||||||||| ||||| Sbjct: 6265181 gtgtacaccgtgttcgtgaggacggggtccgcgtggaagggcggcacggactcgacgatc 6265122 Query: 212 gg 213 || Sbjct: 6265121 gg 6265120 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 181 gatctggaagggcgggacggactcggcgatcgg 213 ||||||||||| ||| |||||| |||||||||| Sbjct: 5386414 gatctggaaggccggcacggacgcggcgatcgg 5386446
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 269 tggggcggcatgatgggcgccggccacgactattacgagcgcggcaacctcgacatcttc 328 ||||||||| |||||||||||||||||||||| |||||||| |||||||| ||| | ||| Sbjct: 59140 tggggcggcctgatgggcgccggccacgactactacgagcggggcaacctggacgtgttc 59081 Query: 329 agcggtcgcgggccgtgc 346 ||||| ||||| |||||| Sbjct: 59080 agcggccgcggcccgtgc 59063 Score = 44.1 bits (22), Expect = 0.34 Identities = 52/62 (83%) Strand = Plus / Minus Query: 152 gtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggactcggcgatc 211 |||||||| |||| |||| ||||||| || ||||||||||| ||||||||| ||||| Sbjct: 59257 gtgtacaccgtgttcgtgaggacggggtccgcgtggaagggcggcacggactcgacgatc 59198 Query: 212 gg 213 || Sbjct: 59197 gg 59196
>dbj|AK108233.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-G05, full insert sequence Length = 788 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 269 tggggcggcatgatgggcgccggccacgactattacgagcgcggcaacctcgacatcttc 328 ||||||||| |||||||||||||||||||||| |||||||| |||||||| ||| | ||| Sbjct: 248 tggggcggcctgatgggcgccggccacgactactacgagcggggcaacctggacgtgttc 307 Query: 329 agcggtcgcgggccgtgc 346 ||||| ||||| |||||| Sbjct: 308 agcggccgcggcccgtgc 325 Score = 44.1 bits (22), Expect = 0.34 Identities = 52/62 (83%) Strand = Plus / Plus Query: 152 gtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggactcggcgatc 211 |||||||| |||| |||| ||||||| || ||||||||||| ||||||||| ||||| Sbjct: 131 gtgtacaccgtgttcgtgaggacggggtccgcgtggaagggcggcacggactcgacgatc 190 Query: 212 gg 213 || Sbjct: 191 gg 192
>ref|XM_467841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 801 Score = 83.8 bits (42), Expect = 4e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 269 tggggcggcatgatgggcgccggccacgactattacgagcgcggcaacctcgacatcttc 328 ||||||||| ||||||| | |||||| ||| | ||||||||||||||||||||||||| Sbjct: 345 tggggcggcctgatgggggagggccactcctacttcgagcgcggcaacctcgacatcttc 404 Query: 329 agcggtcgcgggccgtgcatgg 350 ||||| ||||| |||||||||| Sbjct: 405 agcggccgcggcccgtgcatgg 426 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 147 agtgtgtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggac 202 |||| ||||||||||||||| | |||||||| ||||||||||||| |||||||||| Sbjct: 223 agtgcgtgtacacggtgtacatccggacggggtcgatctggaaggccgggacggac 278
>ref|XM_506976.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1288_G09.19 mRNA Length = 898 Score = 83.8 bits (42), Expect = 4e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 269 tggggcggcatgatgggcgccggccacgactattacgagcgcggcaacctcgacatcttc 328 ||||||||| ||||||| | |||||| ||| | ||||||||||||||||||||||||| Sbjct: 350 tggggcggcctgatgggggagggccactcctacttcgagcgcggcaacctcgacatcttc 409 Query: 329 agcggtcgcgggccgtgcatgg 350 ||||| ||||| |||||||||| Sbjct: 410 agcggccgcggcccgtgcatgg 431 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 147 agtgtgtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggac 202 |||| ||||||||||||||| | |||||||| ||||||||||||| |||||||||| Sbjct: 228 agtgcgtgtacacggtgtacatccggacggggtcgatctggaaggccgggacggac 283
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 4e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 269 tggggcggcatgatgggcgccggccacgactattacgagcgcggcaacctcgacatcttc 328 ||||||||| ||||||| | |||||| ||| | ||||||||||||||||||||||||| Sbjct: 31695381 tggggcggcctgatgggggagggccactcctacttcgagcgcggcaacctcgacatcttc 31695440 Query: 329 agcggtcgcgggccgtgcatgg 350 ||||| ||||| |||||||||| Sbjct: 31695441 agcggccgcggcccgtgcatgg 31695462 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 147 agtgtgtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggac 202 |||| ||||||||||||||| | |||||||| ||||||||||||| |||||||||| Sbjct: 31695259 agtgcgtgtacacggtgtacatccggacggggtcgatctggaaggccgggacggac 31695314
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_G09 Length = 109672 Score = 83.8 bits (42), Expect = 4e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 269 tggggcggcatgatgggcgccggccacgactattacgagcgcggcaacctcgacatcttc 328 ||||||||| ||||||| | |||||| ||| | ||||||||||||||||||||||||| Sbjct: 75168 tggggcggcctgatgggggagggccactcctacttcgagcgcggcaacctcgacatcttc 75227 Query: 329 agcggtcgcgggccgtgcatgg 350 ||||| ||||| |||||||||| Sbjct: 75228 agcggccgcggcccgtgcatgg 75249 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 147 agtgtgtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggac 202 |||| ||||||||||||||| | |||||||| ||||||||||||| |||||||||| Sbjct: 75046 agtgcgtgtacacggtgtacatccggacggggtcgatctggaaggccgggacggac 75101
>dbj|AK104930.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F02, full insert sequence Length = 801 Score = 83.8 bits (42), Expect = 4e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 269 tggggcggcatgatgggcgccggccacgactattacgagcgcggcaacctcgacatcttc 328 ||||||||| ||||||| | |||||| ||| | ||||||||||||||||||||||||| Sbjct: 345 tggggcggcctgatgggggagggccactcctacttcgagcgcggcaacctcgacatcttc 404 Query: 329 agcggtcgcgggccgtgcatgg 350 ||||| ||||| |||||||||| Sbjct: 405 agcggccgcggcccgtgcatgg 426 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 147 agtgtgtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggac 202 |||| ||||||||||||||| | |||||||| ||||||||||||| |||||||||| Sbjct: 223 agtgcgtgtacacggtgtacatccggacggggtcgatctggaaggccgggacggac 278
>dbj|AK065736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038J04, full insert sequence Length = 898 Score = 83.8 bits (42), Expect = 4e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 269 tggggcggcatgatgggcgccggccacgactattacgagcgcggcaacctcgacatcttc 328 ||||||||| ||||||| | |||||| ||| | ||||||||||||||||||||||||| Sbjct: 350 tggggcggcctgatgggggagggccactcctacttcgagcgcggcaacctcgacatcttc 409 Query: 329 agcggtcgcgggccgtgcatgg 350 ||||| ||||| |||||||||| Sbjct: 410 agcggccgcggcccgtgcatgg 431 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 147 agtgtgtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggac 202 |||| ||||||||||||||| | |||||||| ||||||||||||| |||||||||| Sbjct: 228 agtgcgtgtacacggtgtacatccggacggggtcgatctggaaggccgggacggac 283
>ref|XM_472723.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 573 Score = 75.8 bits (38), Expect = 9e-11 Identities = 59/66 (89%) Strand = Plus / Plus Query: 281 atgggcgccggccacgactattacgagcgcggcaacctcgacatcttcagcggtcgcggg 340 ||||||||||| |||||||| ||||||||||||||| ||||| | |||||||| |||| | Sbjct: 280 atgggcgccgggcacgactactacgagcgcggcaacgtcgacgtgttcagcgggcgcgcg 339 Query: 341 ccgtgc 346 |||||| Sbjct: 340 ccgtgc 345 Score = 54.0 bits (27), Expect = 3e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 147 agtgtgtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggactcgg 206 |||| ||||||||| |||||||| ||| || | ||||||||||| ||| |||||| ||| Sbjct: 146 agtgcgtgtacacgctgtacgtggagaccgggtggatctggaaggccggcacggacgcgg 205 Query: 207 cgatcgg 213 ||||||| Sbjct: 206 cgatcgg 212
>gb|AY109817.1| Zea mays CL10832_1 mRNA sequence Length = 843 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 304 cgagcgcggcaacctcgacatcttcagcggtcgcgggccgtgcatggagcacgcgccgtg 363 ||||||| ||||||| |||||||||||||| |||||||| ||||||| | | |||||||| Sbjct: 566 cgagcgcagcaacctggacatcttcagcggccgcgggccctgcatggcgaaggcgccgtg 507 Query: 364 ctgg 367 |||| Sbjct: 506 ctgg 503 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Minus Query: 147 agtgtgtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggac 202 |||| ||||||||||||| | | |||||||| |||||| ||||| |||||||||| Sbjct: 723 agtgcgtgtacacggtgttcatccggacggggtcgatcctgaaggccgggacggac 668
>ref|XM_472722.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 555 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 269 tggggcggcatgatgggcgccggccacgactattacgagcgcggcaacctcgacatcttc 328 ||||||||| | |||| |||||||||||||| | |||||| ||||| ||||||||||| Sbjct: 241 tggggcggcctcatggcggccggccacgactacttcgagcggagcaacgtcgacatcttc 300 Query: 329 agcggtcgcgggcc 342 ||||| |||||||| Sbjct: 301 agcggccgcgggcc 314 Score = 56.0 bits (28), Expect = 9e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 146 cagtgtgtgtacacggtgtacgtgcggacgggatcgatctggaagggcgggacggactcg 205 ||||| ||||||||| | |||||| |||||| ||||||||||||| ||| || ||| || Sbjct: 118 cagtgcgtgtacacgctctacgtggagacgggctcgatctggaaggccggcaccgacgcg 177 Query: 206 gcgatcgg 213 |||||||| Sbjct: 178 gcgatcgg 185
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Minus Query: 90 cgatcgcggtcgcgggcgccggcg 113 |||||||||||||||||||||||| Sbjct: 1299878 cgatcgcggtcgcgggcgccggcg 1299855
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 90 cgatcgcggtcgcgggcgccggcg 113 |||||||||||||||||||||||| Sbjct: 2159012 cgatcgcggtcgcgggcgccggcg 2159035
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Minus Query: 90 cgatcgcggtcgcgggcgccggcg 113 |||||||||||||||||||||||| Sbjct: 2215679 cgatcgcggtcgcgggcgccggcg 2215656
>gb|AC137113.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0006N14, complete sequence Length = 155730 Score = 46.1 bits (23), Expect = 0.085 Identities = 29/31 (93%) Strand = Plus / Minus Query: 281 atgggcgccggccacgactattacgagcgcg 311 ||||||||||| |||||||| |||||||||| Sbjct: 28839 atgggcgccgggcacgactagtacgagcgcg 28809
>gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0070D14, complete sequence Length = 174780 Score = 46.1 bits (23), Expect = 0.085 Identities = 29/31 (93%) Strand = Plus / Minus Query: 281 atgggcgccggccacgactattacgagcgcg 311 ||||||||||| |||||||| |||||||||| Sbjct: 166170 atgggcgccgggcacgactagtacgagcgcg 166140
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.085 Identities = 23/23 (100%) Strand = Plus / Minus Query: 105 gcgccggcggccgcggcagcctc 127 ||||||||||||||||||||||| Sbjct: 10775827 gcgccggcggccgcggcagcctc 10775805
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.085 Identities = 29/31 (93%) Strand = Plus / Minus Query: 281 atgggcgccggccacgactattacgagcgcg 311 ||||||||||| |||||||| |||||||||| Sbjct: 15173206 atgggcgccgggcacgactagtacgagcgcg 15173176
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.085 Identities = 29/31 (93%) Strand = Plus / Minus Query: 281 atgggcgccggccacgactattacgagcgcg 311 ||||||||||| |||||||| |||||||||| Sbjct: 15254705 atgggcgccgggcacgactagtacgagcgcg 15254675
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.085 Identities = 23/23 (100%) Strand = Plus / Minus Query: 105 gcgccggcggccgcggcagcctc 127 ||||||||||||||||||||||| Sbjct: 10775526 gcgccggcggccgcggcagcctc 10775504
>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 119388 Score = 46.1 bits (23), Expect = 0.085 Identities = 23/23 (100%) Strand = Plus / Minus Query: 105 gcgccggcggccgcggcagcctc 127 ||||||||||||||||||||||| Sbjct: 42176 gcgccggcggccgcggcagcctc 42154
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 gcgatcgcggtcgcgggcgccg 110 |||||||||||||||||||||| Sbjct: 1513589 gcgatcgcggtcgcgggcgccg 1513568
>ref|XM_370302.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06799.4) partial mRNA Length = 2388 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 199 ggactcggcgatcggtgtgacgctgctgg 227 |||||||||||||||| || ||||||||| Sbjct: 1662 ggactcggcgatcggtctgtcgctgctgg 1690
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 ggtcgcgggcgccggcggccgcggc 121 |||||||||||||| |||||||||| Sbjct: 3721613 ggtcgcgggcgccgccggccgcggc 3721637 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 cgccggcggccgcggcagcc 125 |||||||||||||||||||| Sbjct: 5142444 cgccggcggccgcggcagcc 5142425
>dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529B09 Length = 138188 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 181 gatctggaagggcgggacggactcggcgatcgg 213 ||||||||||| ||| |||||| |||||||||| Sbjct: 17348 gatctggaaggccggcacggacgcggcgatcgg 17380
>gb|AC016368.3| Drosophila melanogaster clone BACR36A03, complete sequence Length = 165876 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcggcatgatgggcgccggc 292 |||||||||||||||||||| Sbjct: 5548 gcggcatgatgggcgccggc 5529
>ref|NM_192856.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1209 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 cgccggcggccgcggcagcc 125 |||||||||||||||||||| Sbjct: 189 cgccggcggccgcggcagcc 170
>ref|NM_020655.2| Homo sapiens junctophilin 3 (JPH3), mRNA Length = 3997 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 cgcggtcgcgggcgccggcggccgcggc 121 ||||||| ||||||| |||||||||||| Sbjct: 124 cgcggtctcgggcgcgggcggccgcggc 97
>gb|AC008257.6| Drosophila melanogaster clone BACR08A11, complete sequence Length = 170478 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcggcatgatgggcgccggc 292 |||||||||||||||||||| Sbjct: 103704 gcggcatgatgggcgccggc 103685
>ref|XM_876981.1| PREDICTED: Bos taurus similar to serine/threonine-protein kinase PRP4K, transcript variant 9 (LOC512236), mRNA Length = 3558 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gctgctgggctcggacggca 239 |||||||||||||||||||| Sbjct: 1745 gctgctgggctcggacggca 1726
>ref|XM_876932.1| PREDICTED: Bos taurus similar to serine/threonine-protein kinase PRP4K, transcript variant 8 (LOC512236), mRNA Length = 3521 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gctgctgggctcggacggca 239 |||||||||||||||||||| Sbjct: 1745 gctgctgggctcggacggca 1726
>ref|XM_876862.1| PREDICTED: Bos taurus similar to serine/threonine-protein kinase PRP4K, transcript variant 7 (LOC512236), mRNA Length = 4116 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gctgctgggctcggacggca 239 |||||||||||||||||||| Sbjct: 1745 gctgctgggctcggacggca 1726
>ref|XM_611432.2| PREDICTED: Bos taurus similar to serine/threonine-protein kinase PRP4K, transcript variant 1 (LOC512236), mRNA Length = 5126 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gctgctgggctcggacggca 239 |||||||||||||||||||| Sbjct: 1745 gctgctgggctcggacggca 1726
>ref|XM_876743.1| PREDICTED: Bos taurus similar to serine/threonine-protein kinase PRP4K, transcript variant 6 (LOC512236), mRNA Length = 4048 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gctgctgggctcggacggca 239 |||||||||||||||||||| Sbjct: 1745 gctgctgggctcggacggca 1726
>ref|XM_876689.1| PREDICTED: Bos taurus similar to serine/threonine-protein kinase PRP4K, transcript variant 5 (LOC512236), mRNA Length = 3897 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gctgctgggctcggacggca 239 |||||||||||||||||||| Sbjct: 1745 gctgctgggctcggacggca 1726
>ref|XM_876628.1| PREDICTED: Bos taurus similar to serine/threonine-protein kinase PRP4K, transcript variant 4 (LOC512236), mRNA Length = 4355 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gctgctgggctcggacggca 239 |||||||||||||||||||| Sbjct: 1745 gctgctgggctcggacggca 1726
>ref|XM_865636.1| PREDICTED: Bos taurus similar to serine/threonine-protein kinase PRP4K, transcript variant 3 (LOC512236), mRNA Length = 3555 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gctgctgggctcggacggca 239 |||||||||||||||||||| Sbjct: 1745 gctgctgggctcggacggca 1726
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gcgccggcggccgcggcagc 124 |||||||||||||||||||| Sbjct: 2730941 gcgccggcggccgcggcagc 2730960
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgcgggcgccggcggccgcg 119 |||||||||||||||||||| Sbjct: 68444 cgcgggcgccggcggccgcg 68463
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgcgggcgccggcggccgcg 119 |||||||||||||||||||| Sbjct: 67311 cgcgggcgccggcggccgcg 67330
>gb|AC092720.4| Homo sapiens chromosome 16 clone RP11-482M8, complete sequence Length = 169214 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 cgcggtcgcgggcgccggcggccgcggc 121 ||||||| ||||||| |||||||||||| Sbjct: 133438 cgcggtctcgggcgcgggcggccgcggc 133411
>emb|CR940309.6| M.truncatula DNA sequence from clone MTH2-10C20 on chromosome 3, complete sequence Length = 114380 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 tgtgtgtacacggtgtacgt 168 |||||||||||||||||||| Sbjct: 11843 tgtgtgtacacggtgtacgt 11824 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 tgtgtgtacacggtgtacgt 168 |||||||||||||||||||| Sbjct: 7664 tgtgtgtacacggtgtacgt 7645
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 cgccggcggccgcggcagcc 125 |||||||||||||||||||| Sbjct: 23486 cgccggcggccgcggcagcc 23505
>gb|AC125389.33| Medicago truncatula clone mth2-12a18, complete sequence Length = 143015 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 tgtgtgtacacggtgtacgt 168 |||||||||||||||||||| Sbjct: 50949 tgtgtgtacacggtgtacgt 50968 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 tgtgtgtacacggtgtacgt 168 |||||||||||||||||||| Sbjct: 46770 tgtgtgtacacggtgtacgt 46789
>gb|BT009023.1| Triticum aestivum clone wdk3c.pk012.h14:fis, full insert mRNA sequence Length = 817 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 98 gtcgcgggcgccggcggccgcggcagcc 125 ||||| |||||||||||| ||||||||| Sbjct: 384 gtcgccggcgccggcggcggcggcagcc 411
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 cgggacggactcggcgatcg 212 |||||||||||||||||||| Sbjct: 276950 cgggacggactcggcgatcg 276931
>gb|BC036533.2| Homo sapiens junctophilin 3, mRNA (cDNA clone MGC:33713 IMAGE:5264853), complete cds Length = 3987 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 cgcggtcgcgggcgccggcggccgcggc 121 ||||||| ||||||| |||||||||||| Sbjct: 112 cgcggtctcgggcgcgggcggccgcggc 85
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 gcggtcgcgggcgccggcggccgcggca 122 ||||||||||||| |||||| ||||||| Sbjct: 287423 gcggtcgcgggcggcggcgggcgcggca 287396
>ref|NM_165468.1| Drosophila melanogaster bicoid-interacting protein 3 CG8276-RA, transcript variant A (bin3), mRNA Length = 4821 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcggcatgatgggcgccggc 292 |||||||||||||||||||| Sbjct: 1175 gcggcatgatgggcgccggc 1156
>gb|AC010536.8| Homo sapiens chromosome 16 clone RP11-278A23, complete sequence Length = 208236 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 94 cgcggtcgcgggcgccggcggccgcggc 121 ||||||| ||||||| |||||||||||| Sbjct: 170045 cgcggtctcgggcgcgggcggccgcggc 170072
>ref|NM_078902.2| Drosophila melanogaster bicoid-interacting protein 3 CG8276-RB, transcript variant B (bin3), mRNA Length = 4762 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcggcatgatgggcgccggc 292 |||||||||||||||||||| Sbjct: 1116 gcggcatgatgggcgccggc 1097
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgcgggcgccggcggccgcg 119 |||||||||||||||||||| Sbjct: 67683 cgcgggcgccggcggccgcg 67702
>gb|AY052142.1| Drosophila melanogaster SD09926 full length cDNA Length = 4797 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcggcatgatgggcgccggc 292 |||||||||||||||||||| Sbjct: 1151 gcggcatgatgggcgccggc 1132
>gb|AF249196.1|AF249196 Armina lovenii 18S ribosomal RNA gene, complete sequence Length = 2094 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 tcgcggtcgcgggcgccggc 112 |||||||||||||||||||| Sbjct: 814 tcgcggtcgcgggcgccggc 833
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 cgccggcggccgcggcagcc 125 |||||||||||||||||||| Sbjct: 24823901 cgccggcggccgcggcagcc 24823920
>gb|BT004890.1| Drosophila melanogaster RE52324 full insert cDNA Length = 4768 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcggcatgatgggcgccggc 292 |||||||||||||||||||| Sbjct: 1114 gcggcatgatgggcgccggc 1095
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 gcggtcgcgggcgccggcggccgcggca 122 |||| |||||||| |||||||||||||| Sbjct: 4776227 gcggccgcgggcggcggcggccgcggca 4776200 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 gcgggcgccggcggccgcgg 120 |||||||||||||||||||| Sbjct: 1862958 gcgggcgccggcggccgcgg 1862939 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gcgggcgccggcggccgcggcagc 124 |||||||||| ||||||||||||| Sbjct: 1223667 gcgggcgccgtcggccgcggcagc 1223690
>gb|AF097636.1|AF097636 Drosophila melanogaster bicoid-interacting protein BIN3 (bin3) mRNA, complete cds Length = 4588 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcggcatgatgggcgccggc 292 |||||||||||||||||||| Sbjct: 937 gcggcatgatgggcgccggc 918
>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0501G01 Length = 154561 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 cgccggcggccgcggcagcc 125 |||||||||||||||||||| Sbjct: 47021 cgccggcggccgcggcagcc 47040
>dbj|AK106203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-F10, full insert sequence Length = 1541 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 cgccggcggccgcggcagcc 125 |||||||||||||||||||| Sbjct: 251 cgccggcggccgcggcagcc 232
>dbj|AK099135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047E18, full insert sequence Length = 1523 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 cgccggcggccgcggcagcc 125 |||||||||||||||||||| Sbjct: 250 cgccggcggccgcggcagcc 231
>dbj|AK072290.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018J01, full insert sequence Length = 1525 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 cgccggcggccgcggcagcc 125 |||||||||||||||||||| Sbjct: 252 cgccggcggccgcggcagcc 233
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 cgactattacgagcgcggcaacct 318 ||||||| |||||||||||||||| Sbjct: 5588862 cgactatgacgagcgcggcaacct 5588839
>gb|AE003784.5| Drosophila melanogaster chromosome 2R, section 5 of 73 of the complete sequence Length = 305162 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gcggcatgatgggcgccggc 292 |||||||||||||||||||| Sbjct: 280317 gcggcatgatgggcgccggc 280298
>gb|AC152972.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0048I04, complete sequence Length = 35440 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 gtcgcgggcgccggcggccgcggc 121 |||||||||||||||||| ||||| Sbjct: 22683 gtcgcgggcgccggcggcggcggc 22660
>dbj|AB042636.1| Homo sapiens JP3 mRNA for junctophilin type3, complete cds Length = 2507 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 cgcggtcgcgggcgccggcggccgcggc 121 ||||||| ||||||| |||||||||||| Sbjct: 39 cgcggtctcgggcgcgggcggccgcggc 12
>dbj|AB023626.1| Streptomyces chartreusis gene for alpha-arabinofuranosidase II, complete cds Length = 987 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gggcgccggcggccgcggca 122 |||||||||||||||||||| Sbjct: 100 gggcgccggcggccgcggca 81 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,980,425 Number of Sequences: 3902068 Number of extensions: 1980425 Number of successful extensions: 42757 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41403 Number of HSP's gapped (non-prelim): 1354 length of query: 392 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 370 effective length of database: 17,147,199,772 effective search space: 6344463915640 effective search space used: 6344463915640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
