ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast70h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF112966.1| Triticum aestivum chitinase IV precursor (Cht4) m... 121 2e-24
2gb|AF112963.1| Triticum aestivum chitinase II precursor (Cht2) m... 62 1e-06
3ref|XM_473009.1| Oryza sativa (japonica cultivar-group), predic... 58 2e-05
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
5dbj|AK099973.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
6dbj|AK060363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
7emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 58 2e-05
8emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4,... 58 2e-05
9dbj|AB054811.1| Oryza sativa (indica cultivar-group) gene for PR... 58 2e-05
10dbj|AB054687.1| Oryza sativa (japonica cultivar-group) Cht4 gene... 58 2e-05
11dbj|AB003194.1| Oryza sativa (japonica cultivar-group) mRNA for ... 58 2e-05
12gb|AY532721.1| Tripsacum dactyloides chitinase (chiB) gene, comp... 56 8e-05
13gb|BT016363.1| Zea mays clone Contig196 mRNA sequence 50 0.005
14gb|AY532780.1| Zea mays subsp. parviglumis isolate p14 chitinase... 50 0.005
15gb|AY532777.1| Zea mays subsp. parviglumis isolate p12 chitinase... 50 0.005
16gb|AY532775.1| Zea mays subsp. parviglumis isolate p9 chitinase ... 50 0.005
17gb|AY532774.1| Zea mays subsp. parviglumis isolate p8 chitinase ... 50 0.005
18gb|AY532773.1| Zea mays subsp. parviglumis isolate p6 chitinase ... 50 0.005
19gb|AY532772.1| Zea mays subsp. parviglumis isolate p5 chitinase ... 50 0.005
20gb|AY532771.1| Zea mays subsp. parviglumis isolate p4 chitinase ... 50 0.005
21gb|AY532770.1| Zea mays subsp. parviglumis isolate p3 chitinase ... 50 0.005
22gb|AY532768.1| Zea mays subsp. parviglumis isolate p1 chitinase ... 50 0.005
23gb|AY532731.1| Zea mays subsp. parviglumis isolate p11b chitinas... 50 0.005
24gb|AY532730.1| Zea mays subsp. parviglumis isolate p8 chitinase ... 50 0.005
25gb|AY532728.1| Zea mays subsp. parviglumis isolate p5b chitinase... 50 0.005
26gb|AY532726.1| Zea mays subsp. parviglumis isolate p4 chitinase ... 50 0.005
27gb|AY532722.1| Zea mays subsp. parviglumis isolate p1 chitinase ... 50 0.005
28gb|AF402937.1|AF402937 Saccharum officinarum chitinase-B gene, p... 50 0.005
29gb|AY103546.1| Zea mays PCO155066 mRNA sequence 50 0.005
30gb|M84165.1|MZECHITB Zea mays chitinase B (seed chitinase) gene,... 50 0.005
31gb|M84164.1|MZECHITA Zea mays chitinase A (seed chitinase) gene,... 50 0.005
32ref|XM_473013.1| Oryza sativa (japonica cultivar-group), predic... 46 0.073
33dbj|AK104426.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.073
34dbj|AK104242.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.073
35dbj|AK071013.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.073
36dbj|AB096140.1| Oryza sativa (japonica cultivar-group) chia4a mR... 46 0.073
37gb|BT016338.1| Zea mays clone Contig171 mRNA sequence 44 0.29
38gb|AY532742.1| Zea diploperennis isolate d8 chitinase (chiB) gen... 44 0.29
39gb|AY532741.1| Zea diploperennis isolate d7 chitinase (chiB) gen... 44 0.29
40gb|AY532740.1| Zea diploperennis isolate d6 chitinase (chiB) gen... 44 0.29
41gb|AY532739.1| Zea diploperennis isolate d5 chitinase (chiB) gen... 44 0.29
42gb|AY532738.1| Zea diploperennis isolate d4 chitinase (chiB) gen... 44 0.29
43gb|AY532737.1| Zea diploperennis isolate d2 chitinase (chiB) gen... 44 0.29
44gb|AY532734.1| Zea mays subsp. parviglumis isolate p13 chitinase... 44 0.29
45gb|AY532733.1| Zea mays subsp. parviglumis isolate p12 chitinase... 44 0.29
46gb|AY532732.1| Zea mays subsp. parviglumis isolate p11 chitinase... 44 0.29
47gb|AY532729.1| Zea mays subsp. parviglumis isolate p6 chitinase ... 44 0.29
48gb|AY532727.1| Zea mays subsp. parviglumis isolate p5 chitinase ... 44 0.29
49gb|AY532725.1| Zea mays subsp. parviglumis isolate p3b chitinase... 44 0.29
50gb|AY532724.1| Zea mays subsp. parviglumis isolate p3 chitinase ... 44 0.29
51gb|AY532779.1| Zea mays subsp. parviglumis isolate p13b chitinas... 42 1.1
52gb|AY532778.1| Zea mays subsp. parviglumis isolate p13 chitinase... 42 1.1
53gb|AY532769.1| Zea mays subsp. parviglumis isolate p2 chitinase ... 42 1.1
54gb|AF322013.1|AF322012S2 Bradyrhizobium japonicum symbiotic gene... 40 4.5
55dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 4.5 
>gb|AF112966.1| Triticum aestivum chitinase IV precursor (Cht4) mRNA, complete cds
          Length = 1088

 Score =  121 bits (61), Expect = 2e-24
 Identities = 97/109 (88%)
 Strand = Plus / Plus

                                                                       
Query: 84  tcttggcgctcggggtagcagcactagtcctgtctgccgcgggaatggtggccgcgcaga 143
           ||||||| |||||| |||||||||||||||| |||| ||| ||| ||||||| |||||||
Sbjct: 84  tcttggctctcgggctagcagcactagtcctatctggcgccggactggtggcggcgcaga 143

                                                            
Query: 144 agtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcgg 192
           | |||||||||| | |||||||||||||||||  |||||||||||||||
Sbjct: 144 actgcggctgccagccgaacgagtgctgcagcaagtacggttattgcgg 192



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 282 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaagtccc 326
           ||||| ||||||||||| | ||||||||| |||||||||||||||
Sbjct: 270 tggagagcgtcgtcaccgatgcgttcttcgacgggatcaagtccc 314
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>gb|AF112963.1| Triticum aestivum chitinase II precursor (Cht2) mRNA, complete cds
          Length = 956

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 282 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaagtcccgggccg 332
           ||||| ||||||||||| | ||||||||| ||||||||||||||| |||||
Sbjct: 152 tggagagcgtcgtcaccgacgcgttcttcgacgggatcaagtcccaggccg 202
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>ref|XM_473009.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 858

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 282 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 322
           ||||| |||| |||||| |||||||||||||||||||||||
Sbjct: 251 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 291
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                         
Query: 282      tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 322
                ||||| |||| |||||| |||||||||||||||||||||||
Sbjct: 24664379 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 24664339



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                      
Query: 133      ggccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggtta 186
                |||||||||||| |||||||||  |||||||  ||||||||||| ||| |||||
Sbjct: 24648256 ggccgcgcagaactgcggctgcgcggcgaacttgtgctgcagccagtatggtta 24648203



 Score = 46.1 bits (23), Expect = 0.073
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 288      gcgtcgtcaccaaggcgttcttcaacgggatcaag 322
                |||| |||||| ||||||||||||| |||||||||
Sbjct: 24684848 gcgtggtcaccgaggcgttcttcaatgggatcaag 24684814
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>dbj|AK099973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128C09, full
           insert sequence
          Length = 1059

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 282 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 322
           ||||| |||| |||||| |||||||||||||||||||||||
Sbjct: 158 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 198
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>dbj|AK060363.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-H09, full
           insert sequence
          Length = 1078

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 282 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 322
           ||||| |||| |||||| |||||||||||||||||||||||
Sbjct: 157 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 197
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>emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0522A01, complete
             sequence
          Length = 97077

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 282   tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 322
             ||||| |||| |||||| |||||||||||||||||||||||
Sbjct: 92430 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 92390



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                   
Query: 133   ggccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggtta 186
             |||||||||||| |||||||||  |||||||  ||||||||||| ||| |||||
Sbjct: 87207 ggccgcgcagaactgcggctgcgcggcgaacttgtgctgcagccagtatggtta 87154
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>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11,
             complete sequence
          Length = 133856

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 282   tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 322
             ||||| |||| |||||| |||||||||||||||||||||||
Sbjct: 53902 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 53862



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                   
Query: 133   ggccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggtta 186
             |||||||||||| |||||||||  |||||||  ||||||||||| ||| |||||
Sbjct: 37779 ggccgcgcagaactgcggctgcgcggcgaacttgtgctgcagccagtatggtta 37726



 Score = 46.1 bits (23), Expect = 0.073
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 288   gcgtcgtcaccaaggcgttcttcaacgggatcaag 322
             |||| |||||| ||||||||||||| |||||||||
Sbjct: 74371 gcgtggtcaccgaggcgttcttcaatgggatcaag 74337
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>dbj|AB054811.1| Oryza sativa (indica cultivar-group) gene for PR-3 class IV
           chitinase, complete cds
          Length = 2187

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 282 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 322
           ||||| |||| |||||| |||||||||||||||||||||||
Sbjct: 694 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 734
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>dbj|AB054687.1| Oryza sativa (japonica cultivar-group) Cht4 gene for PR-3 class IV
           chitinase, complete cds
          Length = 2172

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 282 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 322
           ||||| |||| |||||| |||||||||||||||||||||||
Sbjct: 920 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 960
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>dbj|AB003194.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase IIb,
           complete cds
          Length = 1036

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 282 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 322
           ||||| |||| |||||| |||||||||||||||||||||||
Sbjct: 147 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 187
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>gb|AY532721.1| Tripsacum dactyloides chitinase (chiB) gene, complete cds
          Length = 985

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | |||||  ||||||||||  || ||| || ||||||
Sbjct: 102 gccgcgcagaactgcggctgccagccgaacatgtgctgcagcaagttcggctactgcggc 161

                               
Query: 194 actaccgacgcctactgtgg 213
           || |||||||  ||||||||
Sbjct: 162 acgaccgacgagtactgtgg 181
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>gb|BT016363.1| Zea mays clone Contig196 mRNA sequence
          Length = 1079

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 85/105 (80%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 120 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcgggtactgcggc 179

                                                        
Query: 194 actaccgacgcctactgtggagatggatgtaagtctggcccgtgc 238
           || |||||||  |||||||| || || ||  |||| |||||||||
Sbjct: 180 acgaccgacgagtactgtggcgacgggtgccagtcgggcccgtgc 224
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>gb|AY532780.1| Zea mays subsp. parviglumis isolate p14 chitinase (chiA) gene,
           complete cds
          Length = 1131

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | |||   |||||||||  || ||| || ||||||
Sbjct: 93  gccgcgcagaactgcggctgccagccaaacttctgctgcagcaagttcggctactgcggc 152

                            
Query: 194 actaccgacgcctactg 210
           || ||||||||||||||
Sbjct: 153 acgaccgacgcctactg 169
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>gb|AY532777.1| Zea mays subsp. parviglumis isolate p12 chitinase (chiA) gene,
           complete cds
          Length = 1128

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | |||   |||||||||  || ||| || ||||||
Sbjct: 93  gccgcgcagaactgcggctgccagccaaacttctgctgcagcaagttcggctactgcggc 152

                            
Query: 194 actaccgacgcctactg 210
           || ||||||||||||||
Sbjct: 153 acgaccgacgcctactg 169
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>gb|AY532775.1| Zea mays subsp. parviglumis isolate p9 chitinase (chiA) gene,
           complete cds
          Length = 1094

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | |||   |||||||||  || ||| || ||||||
Sbjct: 93  gccgcgcagaactgcggctgccagcctaacttctgctgcagcaagttcggctactgcggc 152

                            
Query: 194 actaccgacgcctactg 210
           || ||||||||||||||
Sbjct: 153 acgaccgacgcctactg 169
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>gb|AY532774.1| Zea mays subsp. parviglumis isolate p8 chitinase (chiA) gene,
           complete cds
          Length = 1132

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | |||   |||||||||  || ||| || ||||||
Sbjct: 99  gccgcgcagaactgcggctgccagccaaacttctgctgcagcaagttcggctactgcggc 158

                            
Query: 194 actaccgacgcctactg 210
           || ||||||||||||||
Sbjct: 159 acgaccgacgcctactg 175
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>gb|AY532773.1| Zea mays subsp. parviglumis isolate p6 chitinase (chiA) gene,
           complete cds
          Length = 1118

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | |||   |||||||||  || ||| || ||||||
Sbjct: 99  gccgcgcagaactgcggctgccagccaaacttctgctgcagcaagttcggctactgcggc 158

                            
Query: 194 actaccgacgcctactg 210
           || ||||||||||||||
Sbjct: 159 acgaccgacgcctactg 175
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>gb|AY532772.1| Zea mays subsp. parviglumis isolate p5 chitinase (chiA) gene,
           complete cds
          Length = 1104

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | |||   |||||||||  || ||| || ||||||
Sbjct: 99  gccgcgcagaactgcggctgccagcctaacttctgctgcagcaagttcggctactgcggc 158

                            
Query: 194 actaccgacgcctactg 210
           || ||||||||||||||
Sbjct: 159 acgaccgacgcctactg 175
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>gb|AY532771.1| Zea mays subsp. parviglumis isolate p4 chitinase (chiA) gene,
           complete cds
          Length = 1122

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | |||   |||||||||  || ||| || ||||||
Sbjct: 93  gccgcgcagaactgcggctgccagcctaacttctgctgcagcaagttcggctactgcggc 152

                            
Query: 194 actaccgacgcctactg 210
           || ||||||||||||||
Sbjct: 153 acgaccgacgcctactg 169
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>gb|AY532770.1| Zea mays subsp. parviglumis isolate p3 chitinase (chiA) gene,
           complete cds
          Length = 1101

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | |||   |||||||||  || ||| || ||||||
Sbjct: 93  gccgcgcagaactgcggctgccagccaaacttctgctgcagcaagttcggctactgcggc 152

                            
Query: 194 actaccgacgcctactg 210
           || ||||||||||||||
Sbjct: 153 acgaccgacgcctactg 169
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>gb|AY532768.1| Zea mays subsp. parviglumis isolate p1 chitinase (chiA) gene,
           complete cds
          Length = 1115

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | |||   |||||||||  || ||| || ||||||
Sbjct: 93  gccgcgcagaactgcggctgccagccaaacttctgctgcagcaagttcggctactgcggc 152

                            
Query: 194 actaccgacgcctactg 210
           || ||||||||||||||
Sbjct: 153 acgaccgacgcctactg 169
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>gb|AY532731.1| Zea mays subsp. parviglumis isolate p11b chitinase (chiB) gene,
           complete cds
          Length = 1140

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 85/105 (80%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160

                                                        
Query: 194 actaccgacgcctactgtggagatggatgtaagtctggcccgtgc 238
           || |||||||  |||||||| || || ||  |||| |||||||||
Sbjct: 161 acgaccgacgagtactgtggcgacgggtgccagtcgggcccgtgc 205
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>gb|AY532730.1| Zea mays subsp. parviglumis isolate p8 chitinase (chiB) gene,
           complete cds
          Length = 1127

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 85/105 (80%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 107 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 166

                                                        
Query: 194 actaccgacgcctactgtggagatggatgtaagtctggcccgtgc 238
           || |||||||  |||||||| || || ||  |||| |||||||||
Sbjct: 167 acgaccgacgagtactgtggcgacgggtgccagtcgggcccgtgc 211
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>gb|AY532728.1| Zea mays subsp. parviglumis isolate p5b chitinase (chiB) gene,
           complete cds
          Length = 1138

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 85/105 (80%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 107 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 166

                                                        
Query: 194 actaccgacgcctactgtggagatggatgtaagtctggcccgtgc 238
           || |||||||  |||||||| || || ||  |||| |||||||||
Sbjct: 167 acgaccgacgagtactgtggcgacgggtgccagtcgggcccgtgc 211
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>gb|AY532726.1| Zea mays subsp. parviglumis isolate p4 chitinase (chiB) gene,
           complete cds
          Length = 1123

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 85/105 (80%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160

                                                        
Query: 194 actaccgacgcctactgtggagatggatgtaagtctggcccgtgc 238
           || |||||||  |||||||| || || ||  |||| |||||||||
Sbjct: 161 acgaccgacgagtactgtggcgacgggtgccagtcgggcccgtgc 205
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>gb|AY532722.1| Zea mays subsp. parviglumis isolate p1 chitinase (chiB) gene,
           complete cds
          Length = 1130

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 85/105 (80%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160

                                                        
Query: 194 actaccgacgcctactgtggagatggatgtaagtctggcccgtgc 238
           || |||||||  |||||||| || || ||  |||| |||||||||
Sbjct: 161 acgaccgacgagtactgtggcgacgggtgccagtcgggcccgtgc 205
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>gb|AF402937.1|AF402937 Saccharum officinarum chitinase-B gene, partial cds
          Length = 914

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||| | |||||||||  || ||| || ||||||
Sbjct: 46  gccgcgcagaactgcggctgccagccaaactactgctgcagcaagttcgggtactgcggc 105

                            
Query: 194 actaccgacgcctactg 210
           || ||||||| ||||||
Sbjct: 106 acgaccgacgactactg 122
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>gb|AY103546.1| Zea mays PCO155066 mRNA sequence
          Length = 1179

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | |||   |||||||||  || ||| || ||||||
Sbjct: 143 gccgcgcagaactgcggctgccagccaaacttctgctgcagcaagttcggctactgcggc 202

                            
Query: 194 actaccgacgcctactg 210
           || ||||||||||||||
Sbjct: 203 acgaccgacgcctactg 219
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>gb|M84165.1|MZECHITB Zea mays chitinase B (seed chitinase) gene, 3'end
          Length = 810

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 85/105 (80%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 55  gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 114

                                                        
Query: 194 actaccgacgcctactgtggagatggatgtaagtctggcccgtgc 238
           || |||||||  |||||||| || || ||  |||| |||||||||
Sbjct: 115 acgaccgacgagtactgtggcgacgggtgccagtcgggcccgtgc 159
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>gb|M84164.1|MZECHITA Zea mays chitinase A (seed chitinase) gene, complete cds
          Length = 843

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | |||   |||||||||  || ||| || ||||||
Sbjct: 70  gccgcgcagaactgcggctgccagccaaacttctgctgcagcaagttcggctactgcggc 129

                            
Query: 194 actaccgacgcctactg 210
           || ||||||||||||||
Sbjct: 130 acgaccgacgcctactg 146
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>ref|XM_473013.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 867

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 288 gcgtcgtcaccaaggcgttcttcaacgggatcaag 322
           |||| |||||| ||||||||||||| |||||||||
Sbjct: 266 gcgtggtcaccgaggcgttcttcaatgggatcaag 300
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>dbj|AK104426.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-G08, full
           insert sequence
          Length = 984

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 288 gcgtcgtcaccaaggcgttcttcaacgggatcaag 322
           |||| |||||| ||||||||||||| |||||||||
Sbjct: 301 gcgtggtcaccgaggcgttcttcaatgggatcaag 335
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>dbj|AK104242.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C08, full
           insert sequence
          Length = 1022

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 288 gcgtcgtcaccaaggcgttcttcaacgggatcaag 322
           |||| |||||| ||||||||||||| |||||||||
Sbjct: 301 gcgtggtcaccgaggcgttcttcaatgggatcaag 335
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>dbj|AK071013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080F19, full
           insert sequence
          Length = 1083

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 288 gcgtcgtcaccaaggcgttcttcaacgggatcaag 322
           |||| |||||| ||||||||||||| |||||||||
Sbjct: 302 gcgtggtcaccgaggcgttcttcaatgggatcaag 336
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>dbj|AB096140.1| Oryza sativa (japonica cultivar-group) chia4a mRNA for chitinase,
           complete cds
          Length = 1067

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 288 gcgtcgtcaccaaggcgttcttcaacgggatcaag 322
           |||| |||||| ||||||||||||| |||||||||
Sbjct: 286 gcgtggtcaccgaggcgttcttcaatgggatcaag 320
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>gb|BT016338.1| Zea mays clone Contig171 mRNA sequence
          Length = 1186

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 127 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 186

                     
Query: 194 actaccgacg 203
           || |||||||
Sbjct: 187 acgaccgacg 196
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>gb|AY532742.1| Zea diploperennis isolate d8 chitinase (chiB) gene, complete cds
          Length = 1081

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160

                     
Query: 194 actaccgacg 203
           || |||||||
Sbjct: 161 acgaccgacg 170
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>gb|AY532741.1| Zea diploperennis isolate d7 chitinase (chiB) gene, complete cds
          Length = 1111

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160

                     
Query: 194 actaccgacg 203
           || |||||||
Sbjct: 161 acgaccgacg 170
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>gb|AY532740.1| Zea diploperennis isolate d6 chitinase (chiB) gene, complete cds
          Length = 1128

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160

                     
Query: 194 actaccgacg 203
           || |||||||
Sbjct: 161 acgaccgacg 170
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>gb|AY532739.1| Zea diploperennis isolate d5 chitinase (chiB) gene, complete cds
          Length = 1080

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160

                     
Query: 194 actaccgacg 203
           || |||||||
Sbjct: 161 acgaccgacg 170
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>gb|AY532738.1| Zea diploperennis isolate d4 chitinase (chiB) gene, complete cds
          Length = 1081

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160

                     
Query: 194 actaccgacg 203
           || |||||||
Sbjct: 161 acgaccgacg 170
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>gb|AY532737.1| Zea diploperennis isolate d2 chitinase (chiB) gene, complete cds
          Length = 1081

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160

                     
Query: 194 actaccgacg 203
           || |||||||
Sbjct: 161 acgaccgacg 170
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>gb|AY532734.1| Zea mays subsp. parviglumis isolate p13 chitinase (chiB) gene,
           complete cds
          Length = 1134

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 113 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 172

                     
Query: 194 actaccgacg 203
           || |||||||
Sbjct: 173 acgaccgacg 182
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>gb|AY532733.1| Zea mays subsp. parviglumis isolate p12 chitinase (chiB) gene,
           complete cds
          Length = 1127

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160

                     
Query: 194 actaccgacg 203
           || |||||||
Sbjct: 161 acgaccgacg 170
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>gb|AY532732.1| Zea mays subsp. parviglumis isolate p11 chitinase (chiB) gene,
           complete cds
          Length = 1126

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160

                     
Query: 194 actaccgacg 203
           || |||||||
Sbjct: 161 acgaccgacg 170
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>gb|AY532729.1| Zea mays subsp. parviglumis isolate p6 chitinase (chiB) gene,
           complete cds
          Length = 1123

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 104 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 163

                     
Query: 194 actaccgacg 203
           || |||||||
Sbjct: 164 acgaccgacg 173
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>gb|AY532727.1| Zea mays subsp. parviglumis isolate p5 chitinase (chiB) gene,
           complete cds
          Length = 1133

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 107 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 166

                     
Query: 194 actaccgacg 203
           || |||||||
Sbjct: 167 acgaccgacg 176
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>gb|AY532725.1| Zea mays subsp. parviglumis isolate p3b chitinase (chiB) gene,
           complete cds
          Length = 1114

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160

                     
Query: 194 actaccgacg 203
           || |||||||
Sbjct: 161 acgaccgacg 170
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>gb|AY532724.1| Zea mays subsp. parviglumis isolate p3 chitinase (chiB) gene,
           complete cds
          Length = 1138

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | ||||  |||||||||  || ||| || ||||||
Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160

                     
Query: 194 actaccgacg 203
           || |||||||
Sbjct: 161 acgaccgacg 170
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>gb|AY532779.1| Zea mays subsp. parviglumis isolate p13b chitinase (chiA) gene,
           complete cds
          Length = 1094

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | |||   |||||||||  || ||| || ||||||
Sbjct: 96  gccgcgcagaactgcggctgccagcctaacttctgctgcagcaagttcggctactgcggc 155

                            
Query: 194 actaccgacgcctactg 210
           || ||||||| ||||||
Sbjct: 156 acgaccgacgactactg 172
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>gb|AY532778.1| Zea mays subsp. parviglumis isolate p13 chitinase (chiA) gene,
           complete cds
          Length = 1094

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | |||   |||||||||  || ||| || ||||||
Sbjct: 96  gccgcgcagaactgcggctgccagcctaacttctgctgcagcaagttcggctactgcggc 155

                            
Query: 194 actaccgacgcctactg 210
           || ||||||| ||||||
Sbjct: 156 acgaccgacgactactg 172
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>gb|AY532769.1| Zea mays subsp. parviglumis isolate p2 chitinase (chiA) gene,
           complete cds
          Length = 1120

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 134 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 193
           ||||||||||| |||||||||| | | |||   |||||||||  || ||| || ||||||
Sbjct: 93  gccgcgcagaactgcggctgccagcctaacttctgctgcagcaagttcggctactgcggc 152

                            
Query: 194 actaccgacgcctactg 210
           || ||||||| ||||||
Sbjct: 153 acgaccgacgactactg 169
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>gb|AF322013.1|AF322012S2 Bradyrhizobium japonicum symbiotic gene region, part 2 of 2
          Length = 230573

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 117  ctgccgcgggaatggtggccgcgcagaa 144
            ||||||||||||||| ||||||| ||||
Sbjct: 5825 ctgccgcgggaatggaggccgcgaagaa 5852
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 117     ctgccgcgggaatggtggccgcgcagaa 144
               ||||||||||||||| ||||||| ||||
Sbjct: 2064310 ctgccgcgggaatggaggccgcgaagaa 2064337


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,458,609
Number of Sequences: 3902068
Number of extensions: 1458609
Number of successful extensions: 32702
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 32549
Number of HSP's gapped (non-prelim): 147
length of query: 342
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 320
effective length of database: 17,147,199,772
effective search space: 5487103927040
effective search space used: 5487103927040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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