>dbj|AK073583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051P18, full
           insert sequence
          Length = 1147

 Score =  109 bits (55), Expect = 5e-21
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                       
Query: 245 gggttcaggctgctcggcgaggacacctccgtgcacaaggtgcttggtggcggtaaaact 304
           ||||||||||||||||| ||||||||||||||||||||||  ||||| ||||||||||||
Sbjct: 238 gggttcaggctgctcggggaggacacctccgtgcacaaggctcttgggggcggtaaaact 297

                      
Query: 305 gctgatgtact 315
           |||||||||||
Sbjct: 298 gctgatgtact 308

>gb|DQ244055.1| Hordeum vulgare reticulon mRNA, complete cds
          Length = 615

 Score =  107 bits (54), Expect = 2e-20
 Identities = 54/54 (100%)
 Strand = Plus / Plus

                                                                 
Query: 262 cgaggacacctccgtgcacaaggtgcttggtggcggtaaaactgctgatgtact 315
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15  cgaggacacctccgtgcacaaggtgcttggtggcggtaaaactgctgatgtact 68



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 80 atggccgatccagccgagga 99
          ||||||||||||||||||||
Sbjct: 1  atggccgatccagccgagga 20

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                          
Query: 245      gggttcaggctgctcggcgaggacacctccgtgcacaaggtgcttggtggcggtaaaa 302
                ||||||||||||||||| ||||||||||||||||||||||  ||||| ||||||||||
Sbjct: 17619068 gggttcaggctgctcggggaggacacctccgtgcacaaggctcttgggggcggtaaaa 17619125

>dbj|AP003527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0564B04
          Length = 64684

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                       
Query: 245   gggttcaggctgctcggcgaggacacctccgtgcacaaggtgcttggtggcggtaaaa 302
             ||||||||||||||||| ||||||||||||||||||||||  ||||| ||||||||||
Sbjct: 45416 gggttcaggctgctcggggaggacacctccgtgcacaaggctcttgggggcggtaaaa 45473

>gb|AY104742.1| Zea mays PCO152525 mRNA sequence
          Length = 1163

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 236 aggtcccgtgggttcaggctgctcggcgaggacacctccgtgcacaaggtgcttggtggc 295
           |||||||| || |||||||| || || |||||||| |||||||||||    ||||| |||
Sbjct: 236 aggtcccggggattcaggcttcttggagaggacacttccgtgcacaaatcccttgggggc 295

                         
Query: 296 ggtaaaactgctga 309
           ||||||||||||||
Sbjct: 296 ggtaaaactgctga 309

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 208     gcccgcgtctgcgccggacaccacggtcaggtc 240
               ||||||||| ||| ||||||| |||||||||||
Sbjct: 2094902 gcccgcgtccgcgtcggacacgacggtcaggtc 2094934

>gb|AC004877.1| Homo sapiens PAC clone RP4-751H13 from 7, complete sequence
          Length = 128361

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   aggcggccccgcccgcgtct 217
             ||||||||||||||||||||
Sbjct: 28377 aggcggccccgcccgcgtct 28358

>ref|NM_064862.3| Caenorhabditis elegans Ribosomal Protein, Small subunit family
           member (rps-29) (rps-29) mRNA, complete cds
          Length = 321

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 210 ccgcgtctgcgccggacaccacgg 233
           |||||||||||| |||||||||||
Sbjct: 77  ccgcgtctgcgctggacaccacgg 100

>gb|AC087415.1|AC087415 Caenorhabditis briggsae cosmid CB005O21, complete sequence
          Length = 68731

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 210   ccgcgtctgcgccggacaccacgg 233
             |||||||||||| |||||||||||
Sbjct: 63580 ccgcgtctgcgctggacaccacgg 63603

>gb|U80953.1| Caenorhabditis elegans cosmid B0412, complete sequence
          Length = 33975

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 210  ccgcgtctgcgccggacaccacgg 233
            |||||||||||| |||||||||||
Sbjct: 5647 ccgcgtctgcgctggacaccacgg 5670

>gb|AY105560.1| Zea mays PCO120447 mRNA sequence
          Length = 1191

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 296 ggtaaaactgctgatgtact 315
           ||||||||||||||||||||
Sbjct: 258 ggtaaaactgctgatgtact 277


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,183,255
Number of Sequences: 3902068
Number of extensions: 1183255
Number of successful extensions: 21060
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20967
Number of HSP's gapped (non-prelim): 92
length of query: 315
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 293
effective length of database: 17,147,199,772
effective search space: 5024129533196
effective search space used: 5024129533196
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)