>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2160

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = +1

Query: 7    PHHRRRNPPSL-TFIQIHRARASEGDRPSNRPTKKTS-AGRISVTMVVALGPGRFYGGGL 180
            P  +   PP   T  Q+  A    G  PS  P + T+  GR+     V    GR  GGG 
Sbjct: 1122 PSDKEAPPPKEGTLTQVPLAPPPPGAPPSPAPARFTARGGRVFTPRGVPSRRGR--GGGR 1179

Query: 181  PRPRVFPGDRVDPPA 225
            P P+V PG    PPA
Sbjct: 1180 PPPQVCPG--WSPPA 1192

>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2157

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +1

Query: 28   PPSLTFIQIHRARASEGDRPSNRPTKKTS-AGRISVTMVVALGPGRFYGGGLPRPRVFPG 204
            P   T  Q+  A    G  PS  P + T+  GR+     V    GR  GGG P P+V PG
Sbjct: 1127 PKEGTLTQVPLAPPPPGAPPSPAPARFTARGGRVFTPRGVPSRRGR--GGGRPPPQVCPG 1184

Query: 205  DRVDPPA 225
                PPA
Sbjct: 1185 --WSPPA 1189

>RNG2A_XENLA (Q66J69) Ubiquitin ligase protein RING2-A (EC 6.3.2.-) (RING finger|
           protein 2-A) (RING finger protein 1B-A) (RING1b-A)
          Length = 344

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 45  HPDPQSESERGRSPEQ-QADEEDFSRPDLSHHGG 143
           +P   S  E G S ++ +A E+  + PDLSH GG
Sbjct: 183 NPSVHSNQEAGPSRKRSRASEDSGAEPDLSHEGG 216

>HYPF_AZOVI (P40596) Carbamoyltransferase hypF (EC 2.1.3.-) (Carbamoyl|
           phosphate-converting enzyme hypF) ([NiFe]-hydrogenase
           maturation factor hypF) (Hydrogenase maturation protein
           hypF)
          Length = 776

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 226 PVTDALLCWARDAHWSMGGLGAKRLRLQGRIEGNLVKLRRTARRDAR 366
           P+  AL   AR    ++ G+G   L    R  G + +LRR  RR A+
Sbjct: 206 PIERALAALARGEILALRGVGGFHLACDARNAGAVAELRRRKRRPAK 252

>RNG2B_XENLA (Q7ZWM8) Ubiquitin ligase protein RING2-B (EC 6.3.2.-) (RING finger|
           protein 2-B) (RING finger protein 1B-B) (RING1b-B)
          Length = 343

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 45  HPDPQSESERGRSPEQ-QADEEDFSRPDLSHHGG 143
           +P   S  E G S ++ +A E+  + PDLSH GG
Sbjct: 182 NPSVHSNQEAGPSRKRSRASEDSGAEPDLSHEGG 215

>CH10_THETN (Q8R5T8) 10 kDa chaperonin (Protein Cpn10) (groES protein)|
          Length = 94

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 139 VVALGPGRFYGGGLPRPRVFPGDRV 213
           VVA+GPG++  G    P V  GDRV
Sbjct: 40  VVAVGPGQYIDGKRVEPEVKVGDRV 64

>PCBG_PROMT (Q46JW4) Divinyl chlorophyll a/b light-harvesting protein pcbG|
          Length = 354

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +1

Query: 109 TSAGRISVTMVVALGPGRFYGGGLPRPRVFPGDRVDPPAPVT 234
           T A   SV +V  +    + GG L    +F GD  D P P T
Sbjct: 84  TGANVASVAIVHIIASLVYAGGALSHSLLFDGDLADGPGPTT 125

>RED1_YEAST (P14291) Protein RED1|
          Length = 827

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
 Frame = +3

Query: 33  LTHLHPDPQSESER----GRSPEQQADEEDFSRPDLS 131
           L ++  +P++E E     GR+ EQ+ DEE+ S  +LS
Sbjct: 358 LDYIEEEPENEGEEEEQIGRADEQKEDEEEESLDELS 394

>JHD1A_HUMAN (Q9Y2K7) JmjC domain-containing histone demethylation protein 1A|
           (EC 1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and
           leucine-rich repeat protein 11) (F-box protein FBL7)
           (F-box protein Lilina)
          Length = 1162

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 54  PQSESERGRSPEQQADEEDFSRPDLSHHGGRAR 152
           PQ   E G   E++ +EE+    D +  GG AR
Sbjct: 845 PQRGDEEGLGGEEEEEEEEEEEDDSAEEGGAAR 877

>IF2_THEFY (Q47RV1) Translation initiation factor IF-2|
          Length = 955

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/45 (40%), Positives = 20/45 (44%)
 Frame = +1

Query: 76  GDRPSNRPTKKTSAGRISVTMVVALGPGRFYGGGLPRPRVFPGDR 210
           G RP  RP  +  AG+       A GP R   G  PRP   PG R
Sbjct: 115 GPRPGPRP--EGGAGKAGQQPSGAQGPARPESGKTPRPVPKPGPR 157

>SCG1_MOUSE (P16014) Secretogranin-1 precursor (Secretogranin I) (SgI)|
           (Chromogranin B) (CgB)
          Length = 677

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 45  HPDPQSESERGRSPEQQADEEDFSRPDLSHHGGRAR 152
           HPD + ES   R  E+  +E  +   +   H GR R
Sbjct: 387 HPDSELESTANRHGEETEEERSYEGANGRQHRGRGR 422


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,581,193
Number of Sequences: 219361
Number of extensions: 596404
Number of successful extensions: 2394
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2381
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)