ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast70f02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete sequence Length = 150155 Score = 113 bits (57), Expect = 5e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 70 tcaaggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcacca 129 ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 13655 tcaaggccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccg 13714 Query: 130 ctgtcccgtccatcttccaccaccc 154 | |||||| ||||||||||||||| Sbjct: 13715 ccgtcccgcgcatcttccaccaccc 13739 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 270 gcggagacggtgggcttcttccagctggtgaaccacggcgtgccgg 315 |||||| ||||||||||||||||| |||| |||||||||||||||| Sbjct: 13861 gcggagtcggtgggcttcttccaggtggtcaaccacggcgtgccgg 13906
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 113 bits (57), Expect = 5e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 70 tcaaggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcacca 129 ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 27290740 tcaaggccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccg 27290681 Query: 130 ctgtcccgtccatcttccaccaccc 154 | |||||| ||||||||||||||| Sbjct: 27290680 ccgtcccgcgcatcttccaccaccc 27290656 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 73 aggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcaccactg 132 |||| ||||||||||| ||||||||||| || ||||||||||| || |||||||| || Sbjct: 36014570 aggccttcgacgacacaaaggccggcgtgaagggcctcgtcgatgccggcgtcacaacca 36014629 Query: 133 tcccgtccatcttccaccacc 153 |||| ||||||||||||||| Sbjct: 36014630 tccccgccatcttccaccacc 36014650 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 270 gcggagacggtgggcttcttccagctggtgaaccacggcgtgccgg 315 |||||| ||||||||||||||||| |||| |||||||||||||||| Sbjct: 27290534 gcggagtcggtgggcttcttccaggtggtcaaccacggcgtgccgg 27290489 Score = 48.1 bits (24), Expect = 0.024 Identities = 69/84 (82%) Strand = Plus / Plus Query: 279 gtgggcttcttccagctggtgaaccacggcgtgccggacgacctccttgccgagatgctc 338 ||||| ||||||||| |||||||||||||| | || | ||| ||||| | |||||||| Sbjct: 36014767 gtggggttcttccaggtggtgaaccacggcatccccggcgagctcctggaggagatgctg 36014826 Query: 339 gcgtcggtgcgccgcttccacgag 362 ||| ||||||| || ||| ||||| Sbjct: 36014827 gcggcggtgcggcggttcaacgag 36014850 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 285 ttcttccagctggtgaaccacggcgtgc 312 ||||||||| ||||||||||||||||| Sbjct: 10015798 ttcttccaggcggtgaaccacggcgtgc 10015771
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 113 bits (57), Expect = 5e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 70 tcaaggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcacca 129 ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 27382063 tcaaggccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccg 27382004 Query: 130 ctgtcccgtccatcttccaccaccc 154 | |||||| ||||||||||||||| Sbjct: 27382003 ccgtcccgcgcatcttccaccaccc 27381979 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 73 aggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcaccactg 132 |||| ||||||||||| ||||||||||| || ||||||||||| || |||||||| || Sbjct: 36104644 aggccttcgacgacacaaaggccggcgtgaagggcctcgtcgatgccggcgtcacaacca 36104703 Query: 133 tcccgtccatcttccaccacc 153 |||| ||||||||||||||| Sbjct: 36104704 tccccgccatcttccaccacc 36104724 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 270 gcggagacggtgggcttcttccagctggtgaaccacggcgtgccgg 315 |||||| ||||||||||||||||| |||| |||||||||||||||| Sbjct: 27381857 gcggagtcggtgggcttcttccaggtggtcaaccacggcgtgccgg 27381812 Score = 48.1 bits (24), Expect = 0.024 Identities = 69/84 (82%) Strand = Plus / Plus Query: 279 gtgggcttcttccagctggtgaaccacggcgtgccggacgacctccttgccgagatgctc 338 ||||| ||||||||| |||||||||||||| | || | ||| ||||| | |||||||| Sbjct: 36104841 gtggggttcttccaggtggtgaaccacggcatccccggcgagctcctggaggagatgctg 36104900 Query: 339 gcgtcggtgcgccgcttccacgag 362 ||| ||||||| || ||| ||||| Sbjct: 36104901 gcggcggtgcggcggttcaacgag 36104924 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 285 ttcttccagctggtgaaccacggcgtgc 312 ||||||||| ||||||||||||||||| Sbjct: 10013919 ttcttccaggcggtgaaccacggcgtgc 10013892
>ref|XM_482200.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1131 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 57 cgcctccgtgccatcaaggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgac 116 |||||||||| | || | || |||||||||||||||||||||||||| |||||||||||| Sbjct: 25 cgcctccgtgacctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgac 84 Query: 117 gcgggcgtcaccactgtcccgtccatcttccaccacc 153 || ||||||||||| ||||| | | |||||| ||||| Sbjct: 85 gccggcgtcaccaccgtcccctacttcttccgccacc 121 Score = 60.0 bits (30), Expect = 6e-06 Identities = 83/98 (84%), Gaps = 2/98 (2%) Strand = Plus / Plus Query: 266 ggccgcggagacggtgggcttcttccagctggtgaaccacggcgt-gccggacgacctcc 324 |||||| |||||||| |||||||||||| |||| ||||| ||||| ||||| || ||| Sbjct: 234 ggccgccgagacggtcggcttcttccaggtggtcaaccatggcgtcgccgg-ggagctca 292 Query: 325 ttgccgagatgctcgcgtcggtgcgccgcttccacgag 362 | | ||||||||||||| ||||||| |||||| ||||| Sbjct: 293 tggacgagatgctcgcggcggtgcggcgcttcaacgag 330
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Minus Query: 57 cgcctccgtgccatcaaggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgac 116 |||||||||| | || | || |||||||||||||||||||||||||| |||||||||||| Sbjct: 18563018 cgcctccgtgacctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgac 18562959 Query: 117 gcgggcgtcaccactgtcccgtccatcttccaccacc 153 || ||||||||||| ||||| | | |||||| ||||| Sbjct: 18562958 gccggcgtcaccaccgtcccctacttcttccgccacc 18562922 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Minus Query: 57 cgcctccgtgccatcaaggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgac 116 |||||||||| | || | || |||||||||||||||||||||||||| |||||||||||| Sbjct: 18536321 cgcctccgtgacctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgac 18536262 Query: 117 gcgggcgtcaccactgtcccgtccatcttccaccacc 153 || ||||||||||| ||||| | | |||||| ||||| Sbjct: 18536261 gccggcgtcaccaccgtcccctacttcttccgccacc 18536225 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 78 ttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcaccactgtcccg 137 |||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 18502843 ttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccatcccc 18502784 Query: 138 tccatcttccaccacccgcc 157 | | |||||| ||||||||| Sbjct: 18502783 tacttcttccgccacccgcc 18502764 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 78 ttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcaccactgtcccg 137 |||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 18485906 ttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtcccc 18485847 Query: 138 tccatcttccaccacc 153 | | |||||| ||||| Sbjct: 18485846 tacttcttccgccacc 18485831 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 73 aggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcaccactg 132 |||| |||||||||||||||||||||||||| | |||||||| || ||||||||||| | Sbjct: 18574445 aggccttcgacgacaccaaggccggcgtcaagagactcgtcgatgctggcgtcaccaccg 18574504 Query: 133 tcccgtccatcttccaccacc 153 |||| | |||||||||||| Sbjct: 18574505 tccccgacttcttccaccacc 18574525 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 73 aggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcacc 128 |||| |||||| ||||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 18540550 aggccttcgacaacaccaaggccggtgtcaagggcctcgtcgacgccggcgtcacc 18540495 Score = 60.0 bits (30), Expect = 6e-06 Identities = 83/98 (84%), Gaps = 2/98 (2%) Strand = Plus / Minus Query: 266 ggccgcggagacggtgggcttcttccagctggtgaaccacggcgt-gccggacgacctcc 324 |||||| |||||||| |||||||||||| |||| ||||| ||||| ||||| || ||| Sbjct: 18562809 ggccgccgagacggtcggcttcttccaggtggtcaaccatggcgtcgccgg-ggagctca 18562751 Query: 325 ttgccgagatgctcgcgtcggtgcgccgcttccacgag 362 | | ||||||||||||| ||||||| |||||| ||||| Sbjct: 18562750 tggacgagatgctcgcggcggtgcggcgcttcaacgag 18562713 Score = 60.0 bits (30), Expect = 6e-06 Identities = 83/98 (84%), Gaps = 2/98 (2%) Strand = Plus / Minus Query: 266 ggccgcggagacggtgggcttcttccagctggtgaaccacggcgt-gccggacgacctcc 324 ||||||||||||||| |||||||||||| |||| ||||| ||||| ||||| || || Sbjct: 18536131 ggccgcggagacggtcggcttcttccaggtggtcaaccatggcgtcgccgg-ggagctga 18536073 Query: 325 ttgccgagatgctcgcgtcggtgcgccgcttccacgag 362 | | |||||||||||| ||||||| |||||||||||| Sbjct: 18536072 tggaggagatgctcgcggcggtgcggcgcttccacgag 18536035 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Plus Query: 263 ggtggccgcggagacggtgggcttcttccagctggtgaaccacg 306 ||||||| | |||||||| |||||||||||| |||| ||||||| Sbjct: 18575744 ggtggccaccgagacggtcggcttcttccaggtggtcaaccacg 18575787 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggcgtg 311 ||||||||| ||||||||||||||||| Sbjct: 28036452 ttcttccaggtggtgaaccacggcgtg 28036478
>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0671F11 Length = 159409 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Minus Query: 57 cgcctccgtgccatcaaggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgac 116 |||||||||| | || | || |||||||||||||||||||||||||| |||||||||||| Sbjct: 145041 cgcctccgtgacctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgac 144982 Query: 117 gcgggcgtcaccactgtcccgtccatcttccaccacc 153 || ||||||||||| ||||| | | |||||| ||||| Sbjct: 144981 gccggcgtcaccaccgtcccctacttcttccgccacc 144945 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Minus Query: 57 cgcctccgtgccatcaaggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgac 116 |||||||||| | || | || |||||||||||||||||||||||||| |||||||||||| Sbjct: 118344 cgcctccgtgacctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgac 118285 Query: 117 gcgggcgtcaccactgtcccgtccatcttccaccacc 153 || ||||||||||| ||||| | | |||||| ||||| Sbjct: 118284 gccggcgtcaccaccgtcccctacttcttccgccacc 118248 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 78 ttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcaccactgtcccg 137 |||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 84866 ttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccatcccc 84807 Query: 138 tccatcttccaccacccgcc 157 | | |||||| ||||||||| Sbjct: 84806 tacttcttccgccacccgcc 84787 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 78 ttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcaccactgtcccg 137 |||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 67929 ttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtcccc 67870 Query: 138 tccatcttccaccacc 153 | | |||||| ||||| Sbjct: 67869 tacttcttccgccacc 67854 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 73 aggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcaccactg 132 |||| |||||||||||||||||||||||||| | |||||||| || ||||||||||| | Sbjct: 156468 aggccttcgacgacaccaaggccggcgtcaagagactcgtcgatgctggcgtcaccaccg 156527 Query: 133 tcccgtccatcttccaccacc 153 |||| | |||||||||||| Sbjct: 156528 tccccgacttcttccaccacc 156548 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 73 aggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcacc 128 |||| |||||| ||||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 122573 aggccttcgacaacaccaaggccggtgtcaagggcctcgtcgacgccggcgtcacc 122518 Score = 60.0 bits (30), Expect = 6e-06 Identities = 83/98 (84%), Gaps = 2/98 (2%) Strand = Plus / Minus Query: 266 ggccgcggagacggtgggcttcttccagctggtgaaccacggcgt-gccggacgacctcc 324 |||||| |||||||| |||||||||||| |||| ||||| ||||| ||||| || ||| Sbjct: 144832 ggccgccgagacggtcggcttcttccaggtggtcaaccatggcgtcgccgg-ggagctca 144774 Query: 325 ttgccgagatgctcgcgtcggtgcgccgcttccacgag 362 | | ||||||||||||| ||||||| |||||| ||||| Sbjct: 144773 tggacgagatgctcgcggcggtgcggcgcttcaacgag 144736 Score = 60.0 bits (30), Expect = 6e-06 Identities = 83/98 (84%), Gaps = 2/98 (2%) Strand = Plus / Minus Query: 266 ggccgcggagacggtgggcttcttccagctggtgaaccacggcgt-gccggacgacctcc 324 ||||||||||||||| |||||||||||| |||| ||||| ||||| ||||| || || Sbjct: 118154 ggccgcggagacggtcggcttcttccaggtggtcaaccatggcgtcgccgg-ggagctga 118096 Query: 325 ttgccgagatgctcgcgtcggtgcgccgcttccacgag 362 | | |||||||||||| ||||||| |||||||||||| Sbjct: 118095 tggaggagatgctcgcggcggtgcggcgcttccacgag 118058 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Plus Query: 263 ggtggccgcggagacggtgggcttcttccagctggtgaaccacg 306 ||||||| | |||||||| |||||||||||| |||| ||||||| Sbjct: 157767 ggtggccaccgagacggtcggcttcttccaggtggtcaaccacg 157810
>ref|XM_482192.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 78 ttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcaccactgtcccg 137 |||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 46 ttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccatcccc 105 Query: 138 tccatcttccaccacccgcc 157 | | |||||| ||||||||| Sbjct: 106 tacttcttccgccacccgcc 125
>ref|XM_482188.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1478 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 78 ttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcaccactgtcccg 137 |||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 119 ttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtcccc 178 Query: 138 tccatcttccaccacc 153 | | |||||| ||||| Sbjct: 179 tacttcttccgccacc 194
>dbj|AK068286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K15, full insert sequence Length = 1478 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 78 ttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcaccactgtcccg 137 |||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 119 ttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtcccc 178 Query: 138 tccatcttccaccacc 153 | | |||||| ||||| Sbjct: 179 tacttcttccgccacc 194
>ref|XM_482201.1| Oryza sativa (japonica cultivar-group), mRNA Length = 252 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 73 aggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcaccactg 132 |||| |||||||||||||||||||||||||| | |||||||| || ||||||||||| | Sbjct: 65 aggccttcgacgacaccaaggccggcgtcaagagactcgtcgatgctggcgtcaccaccg 124 Query: 133 tcccgtccatcttccaccacc 153 |||| | |||||||||||| Sbjct: 125 tccccgacttcttccaccacc 145
>ref|XM_470509.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1086 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 73 aggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcaccactg 132 |||| ||||||||||| ||||||||||| || ||||||||||| || |||||||| || Sbjct: 41 aggccttcgacgacacaaaggccggcgtgaagggcctcgtcgatgccggcgtcacaacca 100 Query: 133 tcccgtccatcttccaccacc 153 |||| ||||||||||||||| Sbjct: 101 tccccgccatcttccaccacc 121 Score = 48.1 bits (24), Expect = 0.024 Identities = 69/84 (82%) Strand = Plus / Plus Query: 279 gtgggcttcttccagctggtgaaccacggcgtgccggacgacctccttgccgagatgctc 338 ||||| ||||||||| |||||||||||||| | || | ||| ||||| | |||||||| Sbjct: 238 gtggggttcttccaggtggtgaaccacggcatccccggcgagctcctggaggagatgctg 297 Query: 339 gcgtcggtgcgccgcttccacgag 362 ||| ||||||| || ||| ||||| Sbjct: 298 gcggcggtgcggcggttcaacgag 321
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 73 aggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcaccactg 132 |||| ||||||||||| ||||||||||| || ||||||||||| || |||||||| || Sbjct: 76081 aggccttcgacgacacaaaggccggcgtgaagggcctcgtcgatgccggcgtcacaacca 76140 Query: 133 tcccgtccatcttccaccacc 153 |||| ||||||||||||||| Sbjct: 76141 tccccgccatcttccaccacc 76161 Score = 48.1 bits (24), Expect = 0.024 Identities = 69/84 (82%) Strand = Plus / Plus Query: 279 gtgggcttcttccagctggtgaaccacggcgtgccggacgacctccttgccgagatgctc 338 ||||| ||||||||| |||||||||||||| | || | ||| ||||| | |||||||| Sbjct: 76278 gtggggttcttccaggtggtgaaccacggcatccccggcgagctcctggaggagatgctg 76337 Query: 339 gcgtcggtgcgccgcttccacgag 362 ||| ||||||| || ||| ||||| Sbjct: 76338 gcggcggtgcggcggttcaacgag 76361
>dbj|AP004193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1756_G07 Length = 149457 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 73 aggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcaccactg 132 |||| |||||||||||||||||||||||||| | |||||||| || ||||||||||| | Sbjct: 1715 aggccttcgacgacaccaaggccggcgtcaagagactcgtcgatgctggcgtcaccaccg 1774 Query: 133 tcccgtccatcttccaccacc 153 |||| | |||||||||||| Sbjct: 1775 tccccgacttcttccaccacc 1795 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Plus Query: 263 ggtggccgcggagacggtgggcttcttccagctggtgaaccacg 306 ||||||| | |||||||| |||||||||||| |||| ||||||| Sbjct: 3014 ggtggccaccgagacggtcggcttcttccaggtggtcaaccacg 3057
>dbj|AK071828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118E08, full insert sequence Length = 1252 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 73 aggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcaccactg 132 |||| ||||||||||| ||||||||||| || ||||||||||| || |||||||| || Sbjct: 60 aggccttcgacgacacaaaggccggcgtgaagggcctcgtcgatgccggcgtcacaacca 119 Query: 133 tcccgtccatcttccaccacc 153 |||| ||||||||||||||| Sbjct: 120 tccccgccatcttccaccacc 140 Score = 48.1 bits (24), Expect = 0.024 Identities = 69/84 (82%) Strand = Plus / Plus Query: 279 gtgggcttcttccagctggtgaaccacggcgtgccggacgacctccttgccgagatgctc 338 ||||| ||||||||| |||||||||||||| | || | ||| ||||| | |||||||| Sbjct: 257 gtggggttcttccaggtggtgaaccacggcatccccggcgagctcctggaggagatgctg 316 Query: 339 gcgtcggtgcgccgcttccacgag 362 ||| ||||||| || ||| ||||| Sbjct: 317 gcggcggtgcggcggttcaacgag 340
>ref|XM_482196.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1146 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 73 aggcgttcgacgacaccaaggccggcgtcaaaggcctcgtcgacgcgggcgtcacc 128 |||| |||||| ||||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 41 aggccttcgacaacaccaaggccggtgtcaagggcctcgtcgacgccggcgtcacc 96 Score = 50.1 bits (25), Expect = 0.006 Identities = 81/97 (83%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 267 gccgcggagacggtgggcttcttccagctggtgaaccacggcgt-gccggacgacctcct 325 ||||| |||||||| |||||||||||| |||| ||||| ||||| ||||| || || | Sbjct: 235 gccgccgagacggtcggcttcttccaggtggtcaaccatggcgtcgccgg-ggagctgat 293 Query: 326 tgccgagatgctcgcgtcggtgcgccgcttccacgag 362 | |||||||||||| ||||||| |||||||||||| Sbjct: 294 ggaggagatgctcgcggcggtgcggcgcttccacgag 330
>gb|AF540907.1| Zea mays 2-oxoglutarate-dependent oxygenase (bx6) mRNA, complete cds Length = 1365 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 275 gacggtgggcttcttccagctggtgaaccacggcgtgccgga 316 |||||||||||||||| ||||||||||||||||||| |||| Sbjct: 323 gacggtgggcttcttctggctggtgaaccacggcgtggcgga 364 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 133 tcccgtccatcttccaccacccgccggaatccct 166 ||||||||||||||||||||||||||||| |||| Sbjct: 166 tcccgtccatcttccaccacccgccggaagccct 199
>gb|BT024055.1| Zea mays clone EL01N0440A10 mRNA sequence Length = 1384 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 275 gacggtgggcttcttccagctggtgaaccacggcgtgccgga 316 |||||||||||||||| ||||||||||||||| |||||||| Sbjct: 330 gacggtgggcttcttctggctggtgaaccacggagtgccgga 371 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 135 ccgtccatcttccaccacccgccggaatccct 166 ||||||||||||||||||||||||||| |||| Sbjct: 175 ccgtccatcttccaccacccgccggaagccct 206
>gb|AY104457.1| Zea mays PCO086194 mRNA sequence Length = 1459 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 275 gacggtgggcttcttccagctggtgaaccacggcgtgccgga 316 |||||||||||||||| ||||||||||||||||||| |||| Sbjct: 343 gacggtgggcttcttctggctggtgaaccacggcgtggcgga 384 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 133 tcccgtccatcttccaccacccgccggaatccct 166 ||||||||||||||||||||||||||||| |||| Sbjct: 186 tcccgtccatcttccaccacccgccggaagccct 219
>ref|XM_476744.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1298 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 282 ggcttcttccagctggtgaaccacggcgtgccg 314 |||||||||||| |||||||||||||||||||| Sbjct: 253 ggcttcttccaggtggtgaaccacggcgtgccg 285
>dbj|AK121818.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099A15, full insert sequence Length = 1301 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 282 ggcttcttccagctggtgaaccacggcgtgccg 314 |||||||||||| |||||||||||||||||||| Sbjct: 257 ggcttcttccaggtggtgaaccacggcgtgccg 289
>dbj|AK060318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F03, full insert sequence Length = 1298 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 282 ggcttcttccagctggtgaaccacggcgtgccg 314 |||||||||||| |||||||||||||||||||| Sbjct: 253 ggcttcttccaggtggtgaaccacggcgtgccg 285
>gb|AY104706.1| Zea mays PCO076122 mRNA sequence Length = 1382 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 282 ggcttcttccagctggtgaaccacggcgt 310 |||||||||||| |||||||||||||||| Sbjct: 291 ggcttcttccaggtggtgaaccacggcgt 319
>ref|XM_482202.1| Oryza sativa (japonica cultivar-group), mRNA Length = 888 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Plus Query: 263 ggtggccgcggagacggtgggcttcttccagctggtgaaccacg 306 ||||||| | |||||||| |||||||||||| |||| ||||||| Sbjct: 480 ggtggccaccgagacggtcggcttcttccaggtggtcaaccacg 523
>ref|XM_467968.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1222 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 286 tcttccagctggtgaaccacggcgtgcc 313 |||||||| ||||||||||||||||||| Sbjct: 282 tcttccaggtggtgaaccacggcgtgcc 309
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 286 tcttccagctggtgaaccacggcgtgcc 313 |||||||| ||||||||||||||||||| Sbjct: 32330397 tcttccaggtggtgaaccacggcgtgcc 32330370 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 285 ttcttccagctggtgaaccacggcgt 310 ||||||||| |||||||||||||||| Sbjct: 25221862 ttcttccaggtggtgaaccacggcgt 25221837
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 286 tcttccagctggtgaaccacggcgtgcc 313 |||||||| ||||||||||||||||||| Sbjct: 106229 tcttccaggtggtgaaccacggcgtgcc 106202
>dbj|AK072697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136E04, full insert sequence Length = 1222 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 286 tcttccagctggtgaaccacggcgtgcc 313 |||||||| ||||||||||||||||||| Sbjct: 282 tcttccaggtggtgaaccacggcgtgcc 309
>gb|AF079588.1|AF079588 Sorghum bicolor 1-aminocyclopropane-1-carboxylate oxidase (ACO1) mRNA, complete cds Length = 1444 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 281 gggcttcttccagctggtgaaccacggc 308 ||||||||||||||| |||||||||||| Sbjct: 240 gggcttcttccagctcgtgaaccacggc 267
>ref|XM_507337.1| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.31 mRNA Length = 1988 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggcgtg 311 ||||||||| ||||||||||||||||| Sbjct: 482 ttcttccaggtggtgaaccacggcgtg 508
>ref|XM_483774.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1422 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggcgtg 311 ||||||||| ||||||||||||||||| Sbjct: 486 ttcttccaggtggtgaaccacggcgtg 512
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggcgtg 311 ||||||||| ||||||||||||||||| Sbjct: 113944 ttcttccaggtggtgaaccacggcgtg 113970
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggcgtg 311 ||||||||| ||||||||||||||||| Sbjct: 33947 ttcttccaggtggtgaaccacggcgtg 33973
>dbj|AK107230.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-E03, full insert sequence Length = 1988 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggcgtg 311 ||||||||| ||||||||||||||||| Sbjct: 482 ttcttccaggtggtgaaccacggcgtg 508
>dbj|AK107117.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-A12, full insert sequence Length = 1422 Score = 46.1 bits (23), Expect = 0.093 Identities = 26/27 (96%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggcgtg 311 ||||||||| ||||||||||||||||| Sbjct: 486 ttcttccaggtggtgaaccacggcgtg 512
>ref|NM_172878.2| Mus musculus RIKEN cDNA B230396O12 gene (B230396O12Rik), mRNA Length = 3484 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 242 tgacatggtctccgccctgaag 263 |||||||||||||||||||||| Sbjct: 706 tgacatggtctccgccctgaag 727
>ref|XM_476745.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1104 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggcgt 310 ||||||||| |||||||||||||||| Sbjct: 202 ttcttccaggtggtgaaccacggcgt 227
>dbj|AK030055.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932418L02 product:hypothetical Prenyl group binding site (CAAX box)/TPR repeat containing protein, full insert sequence Length = 3172 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 242 tgacatggtctccgccctgaag 263 |||||||||||||||||||||| Sbjct: 828 tgacatggtctccgccctgaag 849
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggcgt 310 ||||||||| |||||||||||||||| Sbjct: 3734699 ttcttccaggtggtgaaccacggcgt 3734724 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 accatgagcgcctccgtgcca 69 ||||||||||||||||||||| Sbjct: 42017 accatgagcgcctccgtgcca 42037 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 tggtgaaccacggcgtgccg 314 |||||||||||||||||||| Sbjct: 3732134 tggtgaaccacggcgtgccg 3732153
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggcgt 310 ||||||||| |||||||||||||||| Sbjct: 79050 ttcttccaggtggtgaaccacggcgt 79075 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 tggtgaaccacggcgtgccg 314 |||||||||||||||||||| Sbjct: 76485 tggtgaaccacggcgtgccg 76504
>gb|BC068299.1| Mus musculus RIKEN cDNA B230396O12 gene, mRNA (cDNA clone MGC:76433 IMAGE:30094917), complete cds Length = 3484 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 242 tgacatggtctccgccctgaag 263 |||||||||||||||||||||| Sbjct: 706 tgacatggtctccgccctgaag 727
>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1469H02 Length = 136602 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 285 ttcttccagctggtgaaccacggcgt 310 ||||||||| |||||||||||||||| Sbjct: 122255 ttcttccaggtggtgaaccacggcgt 122230
>dbj|AK108598.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E04, full insert sequence Length = 1660 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggcgt 310 ||||||||| |||||||||||||||| Sbjct: 374 ttcttccaggtggtgaaccacggcgt 399
>dbj|AK061064.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-B08, full insert sequence Length = 1314 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggcgt 310 |||||||||||||||||||| ||||| Sbjct: 222 ttcttccagctggtgaaccatggcgt 247
>dbj|AK059045.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-D08, full insert sequence Length = 1741 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggcgt 310 ||||||||| |||||||||||||||| Sbjct: 372 ttcttccaggtggtgaaccacggcgt 397
>emb|AL607032.16| Mouse DNA sequence from clone RP23-15L19 on chromosome 4, complete sequence Length = 136416 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 242 tgacatggtctccgccctgaag 263 |||||||||||||||||||||| Sbjct: 77379 tgacatggtctccgccctgaag 77400
>ref|XM_476341.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1823 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 accatgagcgcctccgtgcca 69 ||||||||||||||||||||| Sbjct: 359 accatgagcgcctccgtgcca 379
>ref|XM_506127.1| PREDICTED Oryza sativa (japonica cultivar-group), B1026C12.10 mRNA Length = 1875 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 accatgagcgcctccgtgcca 69 ||||||||||||||||||||| Sbjct: 362 accatgagcgcctccgtgcca 382
>gb|DQ324114.1| Lolium temulentum gibberellin 2-oxidase mRNA, complete cds Length = 1023 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 tggtgaaccacggcgtgccgg 315 ||||||||||||||||||||| Sbjct: 161 tggtgaaccacggcgtgccgg 181
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1026C12 Length = 170240 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 accatgagcgcctccgtgcca 69 ||||||||||||||||||||| Sbjct: 41316 accatgagcgcctccgtgcca 41336
>dbj|AK106932.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-C04, full insert sequence Length = 1823 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 accatgagcgcctccgtgcca 69 ||||||||||||||||||||| Sbjct: 359 accatgagcgcctccgtgcca 379
>dbj|AK100112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006A18, full insert sequence Length = 1875 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 accatgagcgcctccgtgcca 69 ||||||||||||||||||||| Sbjct: 362 accatgagcgcctccgtgcca 382
>dbj|AK072222.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013165K20, full insert sequence Length = 1405 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 gggcttcttccagctggtgaaccac 305 |||||||||||||||||| |||||| Sbjct: 258 gggcttcttccagctggtaaaccac 282
>ref|NM_101073.2| Arabidopsis thaliana unknown protein AT1G12010 mRNA, complete cds Length = 1293 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 gggcttcttccagctggtgaacca 304 |||||||||| ||||||||||||| Sbjct: 169 gggcttcttcgagctggtgaacca 192
>ref|XM_550118.1| Oryza sativa (japonica cultivar-group), mRNA Length = 324 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ggtggccgcggagacggtgg 282 |||||||||||||||||||| Sbjct: 90 ggtggccgcggagacggtgg 71
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 tcgtcgacgcgggcgtcacc 128 |||||||||||||||||||| Sbjct: 444039 tcgtcgacgcgggcgtcacc 444058
>ref|NM_190455.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1158 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 281 gggcttcttccagctggtgaaccacggcgtgc 312 ||||||||||||| |||| |||||||| |||| Sbjct: 234 gggcttcttccaggtggtaaaccacggggtgc 265
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 65 tgccatcaaggcgttcgacgacaccaag 92 |||||||||||| ||||| ||||||||| Sbjct: 1854605 tgccatcaaggcattcgaggacaccaag 1854632
>ref|XM_612220.2| PREDICTED: Bos taurus similar to mastermind-like 3 (LOC540588), mRNA Length = 3941 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ggtggccgcggagacggtgg 282 |||||||||||||||||||| Sbjct: 1423 ggtggccgcggagacggtgg 1404
>gb|AY359573.1| Zea mays B73 acc oxidase (ACO31) mRNA, complete cds Length = 1240 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggc 308 ||||||||||| |||||||||||| Sbjct: 211 ttcttccagctcgtgaaccacggc 234
>gb|AY359572.1| Zea mays B73 acc oxidase (ACO15) gene, complete cds Length = 2960 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggc 308 ||||||||||| |||||||||||| Sbjct: 1494 ttcttccagctcgtgaaccacggc 1517
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 catcaaggcgttcgacgaca 87 |||||||||||||||||||| Sbjct: 697555 catcaaggcgttcgacgaca 697536
>ref|XM_566910.1| Cryptococcus neoformans var. neoformans JEC21 purine nucleotide biosynthesis-related protein (CNA06790) partial mRNA Length = 1918 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 65 tgccatcaaggcgttcgacgacaccaag 92 |||||||||||| ||||| ||||||||| Sbjct: 549 tgccatcaaggcattcgaggacaccaag 576
>gb|AC137075.2| Genomic sequence for Oryza sativa, Nipponbare striain, clone OSJNBb0027B12, from chromosome 3, complete sequence Length = 127426 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 285 ttcttccagctggtgaaccacggcgtgc 312 ||||||||| ||||||||||||||||| Sbjct: 65714 ttcttccaggcggtgaaccacggcgtgc 65687
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 catcaaggcgttcgacgaca 87 |||||||||||||||||||| Sbjct: 840386 catcaaggcgttcgacgaca 840367
>emb|AL356957.27| Human DNA sequence from clone RP11-403I13 on chromosome 1 Contains the 5' end of a novel pseudogene, a profilin 1 (PFN1) pseudogene, six novel genes and a novel pseudogene, complete sequence Length = 204702 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gcggagacggtgggcttctt 289 |||||||||||||||||||| Sbjct: 38643 gcggagacggtgggcttctt 38662
>ref|XM_791341.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7092-PA (LOC591790), partial mRNA Length = 9764 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tgatgaccatgagcgcctcc 63 |||||||||||||||||||| Sbjct: 5653 tgatgaccatgagcgcctcc 5634
>emb|Z99108.2|BSUB0005 Bacillus subtilis complete genome (section 5 of 21): from 813670 to 1011078 Length = 197409 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tccgttgatgaccatgagcg 58 |||||||||||||||||||| Sbjct: 102578 tccgttgatgaccatgagcg 102559
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 gccgggaccaccgccgacgc 413 |||||||||||||||||||| Sbjct: 2749620 gccgggaccaccgccgacgc 2749639
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 Length = 346879 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 74 ggcgttcgacgacaccaaggccggcgtc 101 |||||||| ||||||||||| ||||||| Sbjct: 41427 ggcgttcgccgacaccaaggtcggcgtc 41454
>gb|AF446874.1|AF446874 Arabidopsis thaliana At1g12010/F12F1_12 mRNA, complete cds Length = 963 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 gggcttcttccagctggtgaacca 304 |||||||||| ||||||||||||| Sbjct: 102 gggcttcttcgagctggtgaacca 125
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 gcttcaccatcccgctcatc 218 |||||||||||||||||||| Sbjct: 3317473 gcttcaccatcccgctcatc 3317454
>gb|AY052694.1| Arabidopsis thaliana At1g12010/F12F1_12 mRNA, complete cds Length = 1183 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 gggcttcttccagctggtgaacca 304 |||||||||| ||||||||||||| Sbjct: 169 gggcttcttcgagctggtgaacca 192
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 282 ggcttcttccagctggtgaaccacggcgtgcc 313 |||||||||||||| | |||||||||||||| Sbjct: 22489517 ggcttcttccagcttctcaaccacggcgtgcc 22489548
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 281 gggcttcttccagctggtgaaccacggcgtgc 312 ||||||||||||| |||| |||||||| |||| Sbjct: 35630379 gggcttcttccaggtggtaaaccacggggtgc 35630410 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ggtggccgcggagacggtgg 282 |||||||||||||||||||| Sbjct: 2457073 ggtggccgcggagacggtgg 2457054
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416D03 Length = 157112 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ggtggccgcggagacggtgg 282 |||||||||||||||||||| Sbjct: 11494 ggtggccgcggagacggtgg 11475
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 cctcgtcgacgcgggcgtcaccac 130 |||||||||| ||||||||||||| Sbjct: 4209548 cctcgtcgacccgggcgtcaccac 4209571
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 329 cgagatgctcgcgtcggtgcgccgcttc 356 ||||| ||||||| |||||||||||||| Sbjct: 67743 cgagacgctcgcggcggtgcgccgcttc 67770
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 281 gggcttcttccagctggtgaaccacggcgtgc 312 ||||||||||||| |||| |||||||| |||| Sbjct: 33716 gggcttcttccaggtggtaaaccacggggtgc 33747
>dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1331F11 Length = 132205 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 282 ggcttcttccagctggtgaaccacggcgtgcc 313 |||||||||||||| | |||||||||||||| Sbjct: 4718 ggcttcttccagcttctcaaccacggcgtgcc 4749
>dbj|AK110790.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-C12, full insert sequence Length = 1180 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 285 ttcttccagctggtgaaccacggcgtgc 312 ||||||||| ||||||||||||||||| Sbjct: 584 ttcttccaggcggtgaaccacggcgtgc 557
>dbj|AK106774.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-G04, full insert sequence Length = 1513 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 281 gggcttcttccagctggtgaaccacggcgtgc 312 ||||||||||||| |||| |||||||| |||| Sbjct: 363 gggcttcttccaggtggtaaaccacggggtgc 394
>dbj|AK069008.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003A10, full insert sequence Length = 1880 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggcgtgc 312 ||||||||| ||||||||||||||||| Sbjct: 345 ttcttccaggcggtgaaccacggcgtgc 372
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 tcaaggcgttcgacgacaccaagg 93 |||||||||||||| ||||||||| Sbjct: 2930380 tcaaggcgttcgaccacaccaagg 2930357
>dbj|AK064211.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-E12, full insert sequence Length = 1331 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 282 ggcttcttccagctggtgaaccacggcgtgcc 313 |||||||||||||| | |||||||||||||| Sbjct: 242 ggcttcttccagcttctcaaccacggcgtgcc 273
>dbj|AK060599.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-H01, full insert sequence Length = 1367 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 285 ttcttccagctggtgaaccacggcgtgc 312 ||||||||| ||||||||||||||||| Sbjct: 351 ttcttccaggcggtgaaccacggcgtgc 378
>gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete sequence Length = 232605 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 ctacagccgggaccaccgcc 408 |||||||||||||||||||| Sbjct: 208839 ctacagccgggaccaccgcc 208820
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 ctacagccgggaccaccgcc 408 |||||||||||||||||||| Sbjct: 1788878 ctacagccgggaccaccgcc 1788859 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 ctacagccgggaccaccgcc 408 |||||||||||||||||||| Sbjct: 262394 ctacagccgggaccaccgcc 262375
>dbj|AB071820.1| Cucumis melo CmE8 gene, complete cds Length = 3636 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 aaggccggcgtcaaaggcct 109 |||||||||||||||||||| Sbjct: 1976 aaggccggcgtcaaaggcct 1995
>dbj|D85082.1| Bacillus subtilis DNA, genome sequence, 79 to 81 degree region Length = 27830 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tccgttgatgaccatgagcg 58 |||||||||||||||||||| Sbjct: 6489 tccgttgatgaccatgagcg 6470 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,283,338 Number of Sequences: 3902068 Number of extensions: 2283338 Number of successful extensions: 39721 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 38574 Number of HSP's gapped (non-prelim): 1147 length of query: 428 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 406 effective length of database: 17,147,199,772 effective search space: 6961763107432 effective search space used: 6961763107432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
