ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast70e11 |
|---|---|
| Clone Library Name | barley_pub |
>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase| 2) (Hydroperoxide dehydrase 2) Length = 478 Score = 147 bits (370), Expect = 8e-36 Identities = 69/77 (89%), Positives = 73/77 (94%) Frame = +1 Query: 163 REVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRVV 342 R VPGSYG+PFVSA+RDRLDFYY QGQDKYFESR E+YGSTVVRINVPPGPFMARDPRVV Sbjct: 10 RPVPGSYGVPFVSAVRDRLDFYYLQGQDKYFESRAERYGSTVVRINVPPGPFMARDPRVV 69 Query: 343 AVLDAKSFPVLFDVTKV 393 A+LDAKSFPVLFDV KV Sbjct: 70 ALLDAKSFPVLFDVAKV 86
>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 536 Score = 116 bits (290), Expect = 1e-26 Identities = 51/85 (60%), Positives = 72/85 (84%) Frame = +1 Query: 139 SDEGSLVPREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPF 318 SDE +L R++PG YGLP + I+DRLD++Y QG++++F+SR++KY STV R N+PPGPF Sbjct: 65 SDETTLPIRQIPGDYGLPGIGPIQDRLDYFYNQGREEFFKSRLQKYKSTVYRANMPPGPF 124 Query: 319 MARDPRVVAVLDAKSFPVLFDVTKV 393 +A +PRV+ +LDAKSFPVLFD++KV Sbjct: 125 IASNPRVIVLLDAKSFPVLFDMSKV 149
>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase| 4) (Hydroperoxide dehydrase 4) Length = 510 Score = 114 bits (285), Expect = 6e-26 Identities = 52/90 (57%), Positives = 72/90 (80%), Gaps = 1/90 (1%) Frame = +1 Query: 127 GMARSDEGSLVPREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKY-GSTVVRINV 303 G ++ L+ RE+PG YG+PF+S +RDRLD+YYFQG D++F SRV ++ G+TV+R+N+ Sbjct: 18 GQSKLSPSGLLIREIPGGYGVPFLSPLRDRLDYYYFQGADEFFRSRVARHGGATVLRVNM 77 Query: 304 PPGPFMARDPRVVAVLDAKSFPVLFDVTKV 393 PPGPF+A DPRVVA+LDA+SF VL D + V Sbjct: 78 PPGPFLAGDPRVVALLDARSFRVLLDDSMV 107
>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 518 Score = 109 bits (272), Expect = 2e-24 Identities = 49/86 (56%), Positives = 66/86 (76%) Frame = +1 Query: 136 RSDEGSLVPREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGP 315 R+ L R +PG+YGLP V I+DR D++Y QG +++F+SR+ KY STV R+N+PPG Sbjct: 46 RTGSKDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGA 105 Query: 316 FMARDPRVVAVLDAKSFPVLFDVTKV 393 F+A +P+VVA+LD KSFPVLFDV KV Sbjct: 106 FIAENPQVVALLDGKSFPVLFDVDKV 131
>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)| (Rubber particle protein) (RPP) Length = 473 Score = 108 bits (271), Expect = 2e-24 Identities = 49/85 (57%), Positives = 68/85 (80%), Gaps = 1/85 (1%) Frame = +1 Query: 142 DEGSLVPREVPGSYGLPFVSAIRDRLDFYYFQG-QDKYFESRVEKYGSTVVRINVPPGPF 318 D S RE+PGSYG+PF I+DRL+++Y G +D+YF SR++KY STV R N+PPGPF Sbjct: 2 DPSSKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPF 61 Query: 319 MARDPRVVAVLDAKSFPVLFDVTKV 393 ++ +P+V+ +LDAKSFP+LFDV+KV Sbjct: 62 VSSNPKVIVLLDAKSFPILFDVSKV 86
>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase| 3) (Hydroperoxide dehydrase 3) Length = 500 Score = 105 bits (262), Expect = 3e-23 Identities = 47/78 (60%), Positives = 66/78 (84%), Gaps = 1/78 (1%) Frame = +1 Query: 163 REVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKY-GSTVVRINVPPGPFMARDPRV 339 RE+PG YG+PF S +RDRLD++YFQG ++YF SRV ++ G+TV+R+N+PPGPF++ +PRV Sbjct: 30 REIPGGYGVPFFSPLRDRLDYFYFQGAEEYFRSRVARHGGATVLRVNMPPGPFISGNPRV 89 Query: 340 VAVLDAKSFPVLFDVTKV 393 VA+LDA+SF VL D + V Sbjct: 90 VALLDARSFRVLLDDSMV 107
>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) Length = 512 Score = 101 bits (251), Expect = 5e-22 Identities = 49/78 (62%), Positives = 62/78 (79%), Gaps = 1/78 (1%) Frame = +1 Query: 163 REVPGSYGLPFVSAIRDRLDFYYFQG-QDKYFESRVEKYGSTVVRINVPPGPFMARDPRV 339 R+VPG YG P V AIRDR +++Y G +D +F +RV + STVVR+N+PPGPF+ARDPRV Sbjct: 48 RKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVARDPRV 107 Query: 340 VAVLDAKSFPVLFDVTKV 393 VA+LDA SFPVLFD + V Sbjct: 108 VALLDAASFPVLFDTSLV 125
>TRPC_XANCP (Q8PD70) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 265 Score = 32.3 bits (72), Expect = 0.28 Identities = 17/61 (27%), Positives = 27/61 (44%) Frame = +1 Query: 160 PREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRV 339 P ++ SY S + D Y+FQG D Y + E V+R + P+ + RV Sbjct: 76 PADIAVSYEFGGASCLSVLTDMYFFQGSDAYLQQAREACTLPVLRKDFTVDPYQVYEARV 135 Query: 340 V 342 + Sbjct: 136 L 136
>CP131_DROME (Q9VFJ0) Probable cytochrome P450 313a1 (EC 1.14.-.-)| (CYPCCCXIIIA1) Length = 492 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = +1 Query: 166 EVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRVV 342 ++PG GLP + + + + Y + + + + KYGST++ P + RDP+VV Sbjct: 31 KIPGPIGLPILGSSLENIITY--KRKLSFRTKYLNKYGSTILTWMGPVPFIVTRDPKVV 87
>SPC34_SCHPO (O14285) DASH complex subunit spc34 (Outer kinetochore protein| spc34) Length = 164 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +1 Query: 193 FVSAIRDRLDFYYFQGQDKYFESRVEKY 276 +V+ I + LD Y QG +Y E+ VEKY Sbjct: 75 YVACIEELLDIYPMQGGREYLETLVEKY 102
>C90A1_ARATH (Q42569) Cytochrome P450 90A1 (EC 1.14.-.-)| Length = 472 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/37 (32%), Positives = 19/37 (51%) Frame = +1 Query: 172 PGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGS 282 PGS GLP + + Y + + + + RV +YGS Sbjct: 33 PGSLGLPLIGETFQLIGAYKTENPEPFIDERVARYGS 69
>RRMJ_METMA (Q8PUP4) Ribosomal RNA large subunit methyltransferase J (EC| 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) Length = 268 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 13/51 (25%) Frame = +1 Query: 208 RDRLDFYYFQGQDKYFESR-------------VEKYGSTVVRINVPPGPFM 321 RDR D+YY Q +++ + SR V K G +VV + PG ++ Sbjct: 3 RDRRDYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWL 53
>RRMJ_METAC (Q8TR92) Ribosomal RNA large subunit methyltransferase J (EC| 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) Length = 272 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 13/51 (25%) Frame = +1 Query: 208 RDRLDFYYFQGQDKYFESR-------------VEKYGSTVVRINVPPGPFM 321 RDR D+YY Q +++ + SR V K G +VV + PG ++ Sbjct: 3 RDRRDYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWL 53
>TRPC_XYLFT (Q87EX2) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 264 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/61 (26%), Positives = 27/61 (44%) Frame = +1 Query: 160 PREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRV 339 P E+ SY L S + D ++F+G D Y + V+R + P+ + RV Sbjct: 76 PAEIAISYELGGASCLSVLTDVHFFKGHDDYLSQARDACTLPVLRKDFTIDPYQVYEARV 135 Query: 340 V 342 + Sbjct: 136 L 136
>TRPC_XYLFA (Q9PGT5) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 264 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/61 (26%), Positives = 27/61 (44%) Frame = +1 Query: 160 PREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRV 339 P E+ SY L S + D ++F+G D Y + V+R + P+ + RV Sbjct: 76 PAEIAISYELGGASCLSVLTDVHFFKGHDDYLSQARDACTLPVLRKDFTIDPYQVYEARV 135 Query: 340 V 342 + Sbjct: 136 L 136
>FAS1_SCHPO (Q9UUG0) Fatty acid synthase beta subunit (EC 2.3.1.86) [Includes:| 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2. Length = 2073 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = +1 Query: 187 LPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMAR 327 +PF+ AI D +FY+ + E G V R+ + GP A+ Sbjct: 1017 VPFIPAIDDTFEFYFKKDSLWQSEDLAAVVGEDVGRVAILQGPMAAK 1063
>TRPC_PSEPU (P20578) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 277 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/62 (25%), Positives = 26/62 (41%) Frame = +1 Query: 157 VPREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPR 336 VP E+ SY + + D YFQG D+Y + V+R + P+ + R Sbjct: 77 VPAEIAVSYEKGGATCLSVLTDVDYFQGADEYLQQARAAVSLPVIRKDFMVDPYQIVEAR 136 Query: 337 VV 342 + Sbjct: 137 AL 138
>TRPC_PSEPK (Q88QR6) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 277 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/62 (25%), Positives = 26/62 (41%) Frame = +1 Query: 157 VPREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPR 336 VP E+ SY + + D YFQG D+Y + V+R + P+ + R Sbjct: 77 VPAEIAVSYEKGGATCLSVLTDVDYFQGADEYLQQARAAVSLPVIRKDFMVDPYQIVEAR 136 Query: 337 VV 342 + Sbjct: 137 AL 138
>DBP_RAT (P16443) D site-binding protein (Albumin D box-binding protein)| (Albumin D-element-binding protein) (D site albumin promoter-binding protein 1) Length = 325 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 4/30 (13%) Frame = +2 Query: 314 PSWRATPAWSPCSTPRASP----CSSTSPR 391 P +PA SP TP SP CSS+SPR Sbjct: 134 PPGGLSPAPSPARTPAPSPGPGSCSSSSPR 163
>DBP_MOUSE (Q60925) D site-binding protein (Albumin D box-binding protein)| (Albumin D-element-binding protein) Length = 325 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 4/30 (13%) Frame = +2 Query: 314 PSWRATPAWSPCSTPRASP----CSSTSPR 391 P +PA SP TP SP CSS+SPR Sbjct: 134 PPGGLSPAPSPARTPAPSPGPGSCSSSSPR 163
>CAC1D_RAT (P27732) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 2) (RAT brain class D) (RBD) Length = 2203 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -2 Query: 71 ISRSRCRQDWSEEALCVCVC 12 IS+S+ R + EALCVC C Sbjct: 516 ISKSKLRSHGAREALCVCRC 535 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,282,041 Number of Sequences: 219361 Number of extensions: 565013 Number of successful extensions: 2262 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 2179 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2253 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
