ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast70e09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 188 bits (95), Expect = 1e-44 Identities = 146/163 (89%) Strand = Plus / Minus Query: 228 gtggacgtgcgcggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggc 287 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23490519 gtggacgtgcgtggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggc 23490460 Query: 288 ctggggcgtggcgcagctgggatgggtggccgggccggtgtgcatgctctgcttcgccgt 347 ||| |||||||| ||||||| ||||||| || |||| |||||| ||||||||| | Sbjct: 23490459 gtggagcgtggcgaagctggggtgggtggggggaccggcctgcatggcctgcttcgcgct 23490400 Query: 348 cgtcacctacgtctccgcctccctcctctccgactgctaccgc 390 ||||||||||||||||||| | || |||||||||||||||||| Sbjct: 23490399 cgtcacctacgtctccgccgcgctgctctccgactgctaccgc 23490357 Score = 127 bits (64), Expect = 3e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 24509818 gcgcacatcatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggggcgtcgcg 24509877 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 24509878 cagctggggtgggtggccgg 24509897 Score = 123 bits (62), Expect = 5e-25 Identities = 95/106 (89%) Strand = Plus / Minus Query: 220 gggaccgagtggacgtgcgcggcgcacatcatcacggcggtgatcgggtccggggtgctg 279 ||||| ||||||||| ||||||||| | |||||||||||||||||||||||||||||| Sbjct: 23497995 gggacggagtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggggtgctg 23497936 Query: 280 tcgctggcctggggcgtggcgcagctgggatgggtggccgggccgg 325 |||||||| ||| |||||||||||||||| ||| |||| ||||||| Sbjct: 23497935 tcgctggcgtggagcgtggcgcagctggggtggctggcggggccgg 23497890 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 229 tggacgtgcgcggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcc 288 |||||||||| |||||||| ||||| ||||||||||||| ||| |||||| ||||| | Sbjct: 33695954 tggacgtgcgtagcgcacattatcaccgcggtgatcgggtgcggcgtgctggcgctgtcg 33696013 Query: 289 tggggcgtggcgcagctgggatgggtggccgggccggtgtgcatgctctgcttcgccgtc 348 ||| |||| |||||||| || ||||||||||| || | |||| | ||||||||| || Sbjct: 33696014 tggagcgtcgcgcagctcggctgggtggccggccccatcgccatggtgtgcttcgccttc 33696073 Query: 349 gtcacctacgtctccgcct 367 ||||||||| |||| |||| Sbjct: 33696074 gtcacctacatctcggcct 33696092 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 148 gcaatggcggtgcagcactccctccaggtg 177 |||||||||||||| ||||||||| ||||| Sbjct: 23490739 gcaatggcggtgcaccactccctcgaggtg 23490710
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 188 bits (95), Expect = 1e-44 Identities = 146/163 (89%) Strand = Plus / Minus Query: 228 gtggacgtgcgcggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggc 287 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46422 gtggacgtgcgtggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggc 46363 Query: 288 ctggggcgtggcgcagctgggatgggtggccgggccggtgtgcatgctctgcttcgccgt 347 ||| |||||||| ||||||| ||||||| || |||| |||||| ||||||||| | Sbjct: 46362 gtggagcgtggcgaagctggggtgggtggggggaccggcctgcatggcctgcttcgcgct 46303 Query: 348 cgtcacctacgtctccgcctccctcctctccgactgctaccgc 390 ||||||||||||||||||| | || |||||||||||||||||| Sbjct: 46302 cgtcacctacgtctccgccgcgctgctctccgactgctaccgc 46260 Score = 123 bits (62), Expect = 5e-25 Identities = 95/106 (89%) Strand = Plus / Minus Query: 220 gggaccgagtggacgtgcgcggcgcacatcatcacggcggtgatcgggtccggggtgctg 279 ||||| ||||||||| ||||||||| | |||||||||||||||||||||||||||||| Sbjct: 53898 gggacggagtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggggtgctg 53839 Query: 280 tcgctggcctggggcgtggcgcagctgggatgggtggccgggccgg 325 |||||||| ||| |||||||||||||||| ||| |||| ||||||| Sbjct: 53838 tcgctggcgtggagcgtggcgcagctggggtggctggcggggccgg 53793 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 148 gcaatggcggtgcagcactccctccaggtg 177 |||||||||||||| ||||||||| ||||| Sbjct: 46642 gcaatggcggtgcaccactccctcgaggtg 46613
>ref|XM_472988.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 127 bits (64), Expect = 3e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 121 gcgcacatcatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggggcgtcgcg 180 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 181 cagctggggtgggtggccgg 200
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 127 bits (64), Expect = 3e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 69449 gcgcacatcatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggggcgtcgcg 69508 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 69509 cagctggggtgggtggccgg 69528
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 127 bits (64), Expect = 3e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 103140 gcgcacatcatcacggcggtgatcgggtccggcgtgctgtcgctggcgtggggcgtcgcg 103199 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 103200 cagctggggtgggtggccgg 103219
>ref|XM_472826.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 125 bits (63), Expect = 1e-25 Identities = 96/107 (89%) Strand = Plus / Plus Query: 219 cgggaccgagtggacgtgcgcggcgcacatcatcacggcggtgatcgggtccggggtgct 278 |||||| ||||||||| ||||||||| | ||||||||||||||||||||||||||||| Sbjct: 90 cgggacggagtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggggtgct 149 Query: 279 gtcgctggcctggggcgtggcgcagctgggatgggtggccgggccgg 325 ||||||||| ||| |||||||||||||||| ||| |||| ||||||| Sbjct: 150 gtcgctggcgtggagcgtggcgcagctggggtggctggcggggccgg 196
>dbj|AK071044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081F09, full insert sequence Length = 1809 Score = 125 bits (63), Expect = 1e-25 Identities = 96/107 (89%) Strand = Plus / Plus Query: 219 cgggaccgagtggacgtgcgcggcgcacatcatcacggcggtgatcgggtccggggtgct 278 |||||| ||||||||| ||||||||| | ||||||||||||||||||||||||||||| Sbjct: 198 cgggacggagtggacggcggcggcgcacgtgatcacggcggtgatcgggtccggggtgct 257 Query: 279 gtcgctggcctggggcgtggcgcagctgggatgggtggccgggccgg 325 ||||||||| ||| |||||||||||||||| ||| |||| ||||||| Sbjct: 258 gtcgctggcgtggagcgtggcgcagctggggtggctggcggggccgg 304
>ref|XM_463528.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 109 bits (55), Expect = 7e-21 Identities = 127/151 (84%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||| ||||| ||||||||||||| |||| | | ||| Sbjct: 148 gcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggggtgggccatcgcg 207 Query: 301 cagctgggatgggtggccgggccggtgtgcatgctctgcttcgccgtcgtcacctacgtc 360 ||||| || |||||||||||||||| | |||| | |||| || ||||||||||| | Sbjct: 208 cagctcggctgggtggccgggccggcggtcatggtgctcttctccctcgtcacctactac 267 Query: 361 tccgcctccctcctctccgactgctaccgct 391 || | |||||||||||||| |||||||||| Sbjct: 268 acctcatccctcctctccgattgctaccgct 298
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 109 bits (55), Expect = 7e-21 Identities = 127/151 (84%) Strand = Plus / Minus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||| ||||| ||||||||||||| |||| | | ||| Sbjct: 38305478 gcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggggtgggccatcgcg 38305419 Query: 301 cagctgggatgggtggccgggccggtgtgcatgctctgcttcgccgtcgtcacctacgtc 360 ||||| || |||||||||||||||| | |||| | |||| || ||||||||||| | Sbjct: 38305418 cagctcggctgggtggccgggccggcggtcatggtgctcttctccctcgtcacctactac 38305359 Query: 361 tccgcctccctcctctccgactgctaccgct 391 || | |||||||||||||| |||||||||| Sbjct: 38305358 acctcatccctcctctccgattgctaccgct 38305328 Score = 99.6 bits (50), Expect = 7e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 239 cggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtgg 298 |||||||||| | |||||||||||||| ||||| |||||| ||||||| ||| |||||| Sbjct: 38113351 cggcgcacattgttacggcggtgatcggctccggcgtgctggcgctggcgtggagcgtgg 38113292 Query: 299 cgcagctgggatgggtggccgggccg 324 |||||||||| ||||||||||||||| Sbjct: 38113291 cgcagctgggttgggtggccgggccg 38113266 Score = 46.1 bits (23), Expect = 0.092 Identities = 56/67 (83%) Strand = Plus / Minus Query: 249 catcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctggg 308 |||||| || ||||||||||| || |||||| ||||| | ||| ||||||| ||| |||| Sbjct: 38128507 catcaccgccgtgatcgggtcaggcgtgctggcgctgccgtggagcgtggcccagatggg 38128448 Query: 309 atgggtg 315 |||||| Sbjct: 38128447 gtgggtg 38128441
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 109 bits (55), Expect = 7e-21 Identities = 127/151 (84%) Strand = Plus / Minus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||| ||||| ||||||||||||| |||| | | ||| Sbjct: 66303 gcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggggtgggccatcgcg 66244 Query: 301 cagctgggatgggtggccgggccggtgtgcatgctctgcttcgccgtcgtcacctacgtc 360 ||||| || |||||||||||||||| | |||| | |||| || ||||||||||| | Sbjct: 66243 cagctcggctgggtggccgggccggcggtcatggtgctcttctccctcgtcacctactac 66184 Query: 361 tccgcctccctcctctccgactgctaccgct 391 || | |||||||||||||| |||||||||| Sbjct: 66183 acctcatccctcctctccgattgctaccgct 66153
>dbj|AK059325.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-A01, full insert sequence Length = 1858 Score = 109 bits (55), Expect = 7e-21 Identities = 127/151 (84%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||| ||||| ||||||||||||| |||| | | ||| Sbjct: 308 gcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggggtgggccatcgcg 367 Query: 301 cagctgggatgggtggccgggccggtgtgcatgctctgcttcgccgtcgtcacctacgtc 360 ||||| || |||||||||||||||| | |||| | |||| || ||||||||||| | Sbjct: 368 cagctcggctgggtggccgggccggcggtcatggtgctcttctccctcgtcacctactac 427 Query: 361 tccgcctccctcctctccgactgctaccgct 391 || | |||||||||||||| |||||||||| Sbjct: 428 acctcatccctcctctccgattgctaccgct 458
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 101 bits (51), Expect = 2e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 239 cggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtgg 298 |||||||||| ||||||||||||||||||||||| |||||||||||||| |||| ||| Sbjct: 20864127 cggcgcacataatcacggcggtgatcgggtccggcgtgctgtcgctggcgtgggcgatgg 20864186 Query: 299 cgcagctgggatgggtggc 317 |||||||||| |||||||| Sbjct: 20864187 cgcagctggggtgggtggc 20864205 Score = 69.9 bits (35), Expect = 6e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||| ||||| ||||| || || || |||| |||| Sbjct: 20841862 gcgcacatcatcacggcggtgatcggctccggcgtgctctctctcgcatgggcaacggcg 20841921 Query: 301 cagctgggatgggtggccgggccggtg 327 ||||| || ||||||| |||||||||| Sbjct: 20841922 cagctcggctgggtggtcgggccggtg 20841948 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 ||||||||| ||||||||||| |||| ||||| |||||||||||||| ||| | |||| Sbjct: 6695463 gcgcacatcgtcacggcggtggtcggctccggcgtgctgtcgctggcatggtccacggcg 6695404 Query: 301 cagctgggatgggtggccgggccgg 325 ||||| || ||||| ||||| |||| Sbjct: 6695403 cagctcggctgggtcgccggcccgg 6695379 Score = 46.1 bits (23), Expect = 0.092 Identities = 41/47 (87%) Strand = Plus / Minus Query: 344 ccgtcgtcacctacgtctccgcctccctcctctccgactgctaccgc 390 |||||||||||||| |||| | |||||||| |||||||||||||| Sbjct: 6705574 ccgtcgtcacctactactcctcggccctcctcgccgactgctaccgc 6705528 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 369 cctcctctccgactgctaccgc 390 |||||||||||||||||||||| Sbjct: 20864257 cctcctctccgactgctaccgc 20864278
>dbj|AP003613.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E11 Length = 148798 Score = 101 bits (51), Expect = 2e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 239 cggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtgg 298 |||||||||| ||||||||||||||||||||||| |||||||||||||| |||| ||| Sbjct: 118802 cggcgcacataatcacggcggtgatcgggtccggcgtgctgtcgctggcgtgggcgatgg 118861 Query: 299 cgcagctgggatgggtggc 317 |||||||||| |||||||| Sbjct: 118862 cgcagctggggtgggtggc 118880 Score = 69.9 bits (35), Expect = 6e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||| ||||| ||||| || || || |||| |||| Sbjct: 96537 gcgcacatcatcacggcggtgatcggctccggcgtgctctctctcgcatgggcaacggcg 96596 Query: 301 cagctgggatgggtggccgggccggtg 327 ||||| || ||||||| |||||||||| Sbjct: 96597 cagctcggctgggtggtcgggccggtg 96623 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 369 cctcctctccgactgctaccgc 390 |||||||||||||||||||||| Sbjct: 118932 cctcctctccgactgctaccgc 118953
>ref|NM_190137.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1398 Score = 99.6 bits (50), Expect = 7e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 239 cggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtgg 298 |||||||||| | |||||||||||||| ||||| |||||| ||||||| ||| |||||| Sbjct: 74 cggcgcacattgttacggcggtgatcggctccggcgtgctggcgctggcgtggagcgtgg 133 Query: 299 cgcagctgggatgggtggccgggccg 324 |||||||||| ||||||||||||||| Sbjct: 134 cgcagctgggttgggtggccgggccg 159
>dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0471B04 Length = 138025 Score = 99.6 bits (50), Expect = 7e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 239 cggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtgg 298 |||||||||| | |||||||||||||| ||||| |||||| ||||||| ||| |||||| Sbjct: 81385 cggcgcacattgttacggcggtgatcggctccggcgtgctggcgctggcgtggagcgtgg 81326 Query: 299 cgcagctgggatgggtggccgggccg 324 |||||||||| ||||||||||||||| Sbjct: 81325 cgcagctgggttgggtggccgggccg 81300 Score = 46.1 bits (23), Expect = 0.092 Identities = 56/67 (83%) Strand = Plus / Minus Query: 249 catcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctggg 308 |||||| || ||||||||||| || |||||| ||||| | ||| ||||||| ||| |||| Sbjct: 96541 catcaccgccgtgatcgggtcaggcgtgctggcgctgccgtggagcgtggcccagatggg 96482 Query: 309 atgggtg 315 |||||| Sbjct: 96481 gtgggtg 96475
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 99.6 bits (50), Expect = 7e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 239 cggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtgg 298 |||||||||| | |||||||||||||| ||||| |||||| ||||||| ||| |||||| Sbjct: 32585 cggcgcacattgttacggcggtgatcggctccggcgtgctggcgctggcgtggagcgtgg 32526 Query: 299 cgcagctgggatgggtggccgggccg 324 |||||||||| ||||||||||||||| Sbjct: 32525 cgcagctgggttgggtggccgggccg 32500 Score = 46.1 bits (23), Expect = 0.092 Identities = 56/67 (83%) Strand = Plus / Minus Query: 249 catcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctggg 308 |||||| || ||||||||||| || |||||| ||||| | ||| ||||||| ||| |||| Sbjct: 47741 catcaccgccgtgatcgggtcaggcgtgctggcgctgccgtggagcgtggcccagatggg 47682 Query: 309 atgggtg 315 |||||| Sbjct: 47681 gtgggtg 47675
>dbj|AK073884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073B17, full insert sequence Length = 1762 Score = 99.6 bits (50), Expect = 7e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 239 cggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtgg 298 |||||||||| | |||||||||||||| ||||| |||||| ||||||| ||| |||||| Sbjct: 150 cggcgcacattgttacggcggtgatcggctccggcgtgctggcgctggcgtggagcgtgg 209 Query: 299 cgcagctgggatgggtggccgggccg 324 |||||||||| ||||||||||||||| Sbjct: 210 cgcagctgggttgggtggccgggccg 235
>ref|XM_467533.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 239 cggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtgg 298 ||||||||||||| |||||||||||||| ||||| |||||||||||||| ||| |||||| Sbjct: 61 cggcgcacatcataacggcggtgatcggctccggcgtgctgtcgctggcgtggagcgtgg 120 Query: 299 cgcagctgggatgggt 314 ||||||| || ||||| Sbjct: 121 cgcagctcggctgggt 136
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 239 cggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtgg 298 ||||||||||||| |||||||||||||| ||||| |||||||||||||| ||| |||||| Sbjct: 30011931 cggcgcacatcataacggcggtgatcggctccggcgtgctgtcgctggcgtggagcgtgg 30011990 Query: 299 cgcagctgggatgggt 314 ||||||| || ||||| Sbjct: 30011991 cgcagctcggctgggt 30012006 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 242 cgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgc 301 |||||||||||||||||||||||||||| || |||||||||||||| |||| | |||| Sbjct: 120026 cgcacatcatcacggcggtgatcgggtcaggtgtgctgtcgctggcgtgggcgatcgcgc 120085 Query: 302 agctgggatgggtgg 316 ||||||| ||||||| Sbjct: 120086 agctgggctgggtgg 120100
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654B04 Length = 156907 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 239 cggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtgg 298 ||||||||||||| |||||||||||||| ||||| |||||||||||||| ||| |||||| Sbjct: 112207 cggcgcacatcataacggcggtgatcggctccggcgtgctgtcgctggcgtggagcgtgg 112266 Query: 299 cgcagctgggatgggt 314 ||||||| || ||||| Sbjct: 112267 cgcagctcggctgggt 112282
>dbj|AK070030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N07, full insert sequence Length = 1506 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 239 cggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtgg 298 ||||||||||||| |||||||||||||| ||||| |||||||||||||| ||| |||||| Sbjct: 61 cggcgcacatcataacggcggtgatcggctccggcgtgctgtcgctggcgtggagcgtgg 120 Query: 299 cgcagctgggatgggt 314 ||||||| || ||||| Sbjct: 121 cgcagctcggctgggt 136
>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02, complete sequence Length = 125650 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||| ||||| ||||||||||||| |||| | ||| Sbjct: 57208 gcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggggtgggcgatcgcg 57267 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 57268 cagctgggttgggtggccgg 57287
>gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0096N19, complete sequence Length = 178671 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||| ||||| |||||||||||||| |||| | ||| Sbjct: 61815 gcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 61756 Query: 301 cagctgggatgggtggccgg 320 ||||| || ||||||||||| Sbjct: 61755 cagctcggctgggtggccgg 61736
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||| ||||| |||||||||||||| |||| | ||| Sbjct: 4769859 gcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 4769918 Query: 301 cagctgggatgggtggccgg 320 ||||| || ||||||||||| Sbjct: 4769919 cagctcggctgggtggccgg 4769938
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||| ||||| ||||||||||||| |||| | ||| Sbjct: 20635168 gcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggggtgggcgatcgcg 20635227 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 20635228 cagctgggttgggtggccgg 20635247 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/72 (87%), Gaps = 2/72 (2%) Strand = Plus / Plus Query: 253 acggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctgggatgg 312 |||||||||||||| ||||| |||||| | ||||| ||| ||||| ||||||||| ||| Sbjct: 744560 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtg--gcagctgggttgg 744617 Query: 313 gtggccgggccg 324 |||||||||||| Sbjct: 744618 gtggccgggccg 744629
>dbj|AK104370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E06, full insert sequence Length = 1707 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||| ||||| |||||||||||||| |||| | ||| Sbjct: 245 gcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 304 Query: 301 cagctgggatgggtggccgg 320 ||||| || ||||||||||| Sbjct: 305 cagctcggctgggtggccgg 324
>dbj|AK068003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129H02, full insert sequence Length = 1781 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||| ||||| |||||||||||||| |||| | ||| Sbjct: 232 gcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 291 Query: 301 cagctgggatgggtggccgg 320 ||||| || ||||||||||| Sbjct: 292 cagctcggctgggtggccgg 311
>dbj|AK065891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044D15, full insert sequence Length = 1975 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||| ||||| ||||||||||||| |||| | ||| Sbjct: 265 gcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggggtgggcgatcgcg 324 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 325 cagctgggttgggtggccgg 344
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||| ||||| |||||||||||||| |||| | ||| Sbjct: 4788643 gcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 4788702 Query: 301 cagctgggatgggtggccgg 320 ||||| || ||||||||||| Sbjct: 4788703 cagctcggctgggtggccgg 4788722
>ref|XM_474206.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1410 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 229 tggacgtgcgcggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcc 288 |||||||||| |||||||| ||||| ||||||||||||| ||| |||||| ||||| | Sbjct: 82 tggacgtgcgtagcgcacattatcaccgcggtgatcgggtgcggcgtgctggcgctgtcg 141 Query: 289 tggggcgtggcgcagctgggatgggtggccgggccggtgtgcatgctctgcttcgccgtc 348 ||| |||| |||||||| || ||||||||||| || | |||| | ||||||||| || Sbjct: 142 tggagcgtcgcgcagctcggctgggtggccggccccatcgccatggtgtgcttcgccttc 201 Query: 349 gtcacctacgtctccgcct 367 ||||||||| |||| |||| Sbjct: 202 gtcacctacatctcggcct 220
>ref|XM_463785.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1814 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 242 cgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgc 301 |||||||||||||||||||||||||||| || |||||||||||||| |||| | |||| Sbjct: 341 cgcacatcatcacggcggtgatcgggtcaggtgtgctgtcgctggcgtgggcgatcgcgc 400 Query: 302 agctgggatgggtgg 316 ||||||| ||||||| Sbjct: 401 agctgggctgggtgg 415
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 229 tggacgtgcgcggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcc 288 |||||||||| |||||||| ||||| ||||||||||||| ||| |||||| ||||| | Sbjct: 127014 tggacgtgcgtagcgcacattatcaccgcggtgatcgggtgcggcgtgctggcgctgtcg 127073 Query: 289 tggggcgtggcgcagctgggatgggtggccgggccggtgtgcatgctctgcttcgccgtc 348 ||| |||| |||||||| || ||||||||||| || | |||| | ||||||||| || Sbjct: 127074 tggagcgtcgcgcagctcggctgggtggccggccccatcgccatggtgtgcttcgccttc 127133 Query: 349 gtcacctacgtctccgcct 367 ||||||||| |||| |||| Sbjct: 127134 gtcacctacatctcggcct 127152
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 229 tggacgtgcgcggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcc 288 |||||||||| |||||||| ||||| ||||||||||||| ||| |||||| ||||| | Sbjct: 46397 tggacgtgcgtagcgcacattatcaccgcggtgatcgggtgcggcgtgctggcgctgtcg 46456 Query: 289 tggggcgtggcgcagctgggatgggtggccgggccggtgtgcatgctctgcttcgccgtc 348 ||| |||| |||||||| || ||||||||||| || | |||| | ||||||||| || Sbjct: 46457 tggagcgtcgcgcagctcggctgggtggccggccccatcgccatggtgtgcttcgccttc 46516 Query: 349 gtcacctacgtctccgcct 367 ||||||||| |||| |||| Sbjct: 46517 gtcacctacatctcggcct 46535
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 85.7 bits (43), Expect = 1e-13 Identities = 115/139 (82%) Strand = Plus / Plus Query: 229 tggacgtgcgcggcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcc 288 |||||||||| |||||||| ||||| ||||||||||||| ||| |||||| ||||| | Sbjct: 127132 tggacgtgcgtagcgcacattatcaccgcggtgatcgggtgcggcgtgctggcgctgtcg 127191 Query: 289 tggggcgtggcgcagctgggatgggtggccgggccggtgtgcatgctctgcttcgccgtc 348 ||| |||| |||||||| || ||||||||||| || | |||| | ||||||||| || Sbjct: 127192 tggagcgtcgcgcagctcggctgggtggccggccccatcgccatggtgtgcttcgccttc 127251 Query: 349 gtcacctacgtctccgcct 367 ||||||||| |||| |||| Sbjct: 127252 gtcacctacatctcggcct 127270
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 242 cgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgc 301 |||||||||||||||||||||||||||| || |||||||||||||| |||| | |||| Sbjct: 114635 cgcacatcatcacggcggtgatcgggtcaggtgtgctgtcgctggcgtgggcgatcgcgc 114694 Query: 302 agctgggatgggtgg 316 ||||||| ||||||| Sbjct: 114695 agctgggctgggtgg 114709
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 242 cgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgc 301 |||||||||||||||||||||||||||| || |||||||||||||| |||| | |||| Sbjct: 69053 cgcacatcatcacggcggtgatcgggtcaggtgtgctgtcgctggcgtgggcgatcgcgc 69112 Query: 302 agctgggatgggtgg 316 ||||||| ||||||| Sbjct: 69113 agctgggctgggtgg 69127
>dbj|AK060685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G03, full insert sequence Length = 1835 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 242 cgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgc 301 |||||||||||||||||||||||||||| || |||||||||||||| |||| | |||| Sbjct: 362 cgcacatcatcacggcggtgatcgggtcaggtgtgctgtcgctggcgtgggcgatcgcgc 421 Query: 302 agctgggatgggtgg 316 ||||||| ||||||| Sbjct: 422 agctgggctgggtgg 436
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 79.8 bits (40), Expect = 7e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 253 acggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctgggatgg 312 |||||||||||||| ||||| |||||| | ||||| ||| |||||||||||||||| ||| Sbjct: 5410933 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtggcgcagctgggttgg 5410874 Query: 313 gtggccgggccg 324 ||||| |||||| Sbjct: 5410873 gtggctgggccg 5410862 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctg 285 |||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 4893438 gcgcacatcatcaccgccgtgatcgggtccggggtgctgtcgctg 4893394 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||| || || ||||| ||||| |||||||||||||| |||| | ||| Sbjct: 4145425 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 4145366 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 4145365 cagctgggctgggtggccgg 4145346 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||| || || ||||| ||||| |||||||||||||| |||| | ||| Sbjct: 4120156 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 4120215 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 4120216 cagctgggctgggtggccgg 4120235 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 254 cggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctgggatggg 313 |||||||| |||| ||||| |||||| ||||||| ||| |||||||||||||| |||| Sbjct: 4880794 cggcggtggtcggctccggcgtgctggcgctggcgtggacggtggcgcagctggggtggg 4880853 Query: 314 tgg 316 ||| Sbjct: 4880854 tgg 4880856
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 79.8 bits (40), Expect = 7e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 253 acggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctgggatgg 312 |||||||||||||| ||||| |||||| | ||||| ||| |||||||||||||||| ||| Sbjct: 5410922 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtggcgcagctgggttgg 5410863 Query: 313 gtggccgggccg 324 ||||| |||||| Sbjct: 5410862 gtggctgggccg 5410851 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctg 285 |||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 4893420 gcgcacatcatcaccgccgtgatcgggtccggggtgctgtcgctg 4893376 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||| || || ||||| ||||| |||||||||||||| |||| | ||| Sbjct: 4145412 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 4145353 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 4145352 cagctgggctgggtggccgg 4145333 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||| || || ||||| ||||| |||||||||||||| |||| | ||| Sbjct: 4120143 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 4120202 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 4120203 cagctgggctgggtggccgg 4120222 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 254 cggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctgggatggg 313 |||||||| |||| ||||| |||||| ||||||| ||| |||||||||||||| |||| Sbjct: 4880776 cggcggtggtcggctccggcgtgctggcgctggcgtggacggtggcgcagctggggtggg 4880835 Query: 314 tgg 316 ||| Sbjct: 4880836 tgg 4880838
>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141841 Score = 79.8 bits (40), Expect = 7e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 253 acggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctgggatgg 312 |||||||||||||| ||||| |||||| | ||||| ||| |||||||||||||||| ||| Sbjct: 54875 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtggcgcagctgggttgg 54934 Query: 313 gtggccgggccg 324 ||||| |||||| Sbjct: 54935 gtggctgggccg 54946
>ref|XM_476538.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1708 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||| || |||||||||||||| ||||| |||||||||||||| |||| | ||| Sbjct: 234 gcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcg 293 Query: 301 cagctgggatgggtggccgggccgg 325 |||||||| |||||| |||||||| Sbjct: 294 cagctggggtgggtgatcgggccgg 318
>ref|XM_476539.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1775 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||| || |||||||||||||| ||||| |||||||||||||| |||| | ||| Sbjct: 109 gcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcg 168 Query: 301 cagctgggatgggtggccgggccgg 325 |||||||| |||||| |||||||| Sbjct: 169 cagctggggtgggtgatcgggccgg 193
>gb|AY224447.1| Oryza sativa (japonica cultivar-group) isolate 23048 amino acid permease-like protein mRNA, partial cds Length = 915 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||| || |||||||||||||| ||||| |||||||||||||| |||| | ||| Sbjct: 40 gcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcg 99 Query: 301 cagctgggatgggtggccgggccgg 325 |||||||| |||||| |||||||| Sbjct: 100 cagctggggtgggtgatcgggccgg 124
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||| || |||||||||||||| ||||| |||||||||||||| |||| | ||| Sbjct: 1826365 gcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcg 1826306 Query: 301 cagctgggatgggtggccgggccgg 325 |||||||| |||||| |||||||| Sbjct: 1826305 cagctggggtgggtgatcgggccgg 1826281
>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 105645 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 253 acggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctgggatgg 312 |||||||||||||| ||||| |||||| | ||||| ||| |||||||||||||||| ||| Sbjct: 82950 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtggcgcagctgggttgg 82891 Query: 313 gtggc 317 ||||| Sbjct: 82890 gtggc 82886
>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0507H12 Length = 143030 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||| || |||||||||||||| ||||| |||||||||||||| |||| | ||| Sbjct: 30944 gcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcg 30885 Query: 301 cagctgggatgggtggccgggccgg 325 |||||||| |||||| |||||||| Sbjct: 30884 cagctggggtgggtgatcgggccgg 30860
>dbj|AP003742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_D07 Length = 131449 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||| || |||||||||||||| ||||| |||||||||||||| |||| | ||| Sbjct: 78584 gcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcg 78525 Query: 301 cagctgggatgggtggccgggccgg 325 |||||||| |||||| |||||||| Sbjct: 78524 cagctggggtgggtgatcgggccgg 78500
>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120825 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctg 285 |||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 44984 gcgcacatcatcaccgccgtgatcgggtccggggtgctgtcgctg 45028 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 254 cggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctgggatggg 313 |||||||| |||| ||||| |||||| ||||||| ||| |||||||||||||| |||| Sbjct: 57628 cggcggtggtcggctccggcgtgctggcgctggcgtggacggtggcgcagctggggtggg 57569 Query: 314 tgg 316 ||| Sbjct: 57568 tgg 57566
>dbj|AK120257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046A03, full insert sequence Length = 1870 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||| || |||||||||||||| ||||| |||||||||||||| |||| | ||| Sbjct: 236 gcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcg 295 Query: 301 cagctgggatgggtggccgggccgg 325 |||||||| |||||| |||||||| Sbjct: 296 cagctggggtgggtgatcgggccgg 320
>dbj|AK106110.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D09, full insert sequence Length = 1708 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||| || |||||||||||||| ||||| |||||||||||||| |||| | ||| Sbjct: 234 gcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcg 293 Query: 301 cagctgggatgggtggccgggccgg 325 |||||||| |||||| |||||||| Sbjct: 294 cagctggggtgggtgatcgggccgg 318
>dbj|AK103862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149D13, full insert sequence Length = 1774 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||| || |||||||||||||| ||||| |||||||||||||| |||| | ||| Sbjct: 108 gcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcg 167 Query: 301 cagctgggatgggtggccgggccgg 325 |||||||| |||||| |||||||| Sbjct: 168 cagctggggtgggtgatcgggccgg 192
>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 73.8 bits (37), Expect = 4e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctg 285 |||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 66521 gcgcacatcatcaccgccgtgatcgggtccggggtgctgtcgctg 66565 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 254 cggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctgggatggg 313 |||||||| |||| ||||| |||||| ||||||| ||| |||||||||||||| |||| Sbjct: 79165 cggcggtggtcggctccggcgtgctggcgctggcgtggacggtggcgcagctggggtggg 79106 Query: 314 tgg 316 ||| Sbjct: 79105 tgg 79103
>dbj|AK106090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B07, full insert sequence Length = 1715 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||| || || ||||| ||||| |||||||||||||| |||| | ||| Sbjct: 222 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 281 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 282 cagctgggctgggtggccgg 301
>dbj|AK105784.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G09, full insert sequence Length = 1773 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||| || || ||||| ||||| |||||||||||||| |||| | ||| Sbjct: 200 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 259 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 260 cagctgggctgggtggccgg 279
>dbj|AK099164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O03, full insert sequence Length = 1709 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||| || || ||||| ||||| |||||||||||||| |||| | ||| Sbjct: 225 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 284 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 285 cagctgggctgggtggccgg 304
>dbj|AK061470.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D07, full insert sequence Length = 1797 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||| || || ||||| ||||| |||||||||||||| |||| | ||| Sbjct: 202 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 261 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 262 cagctgggctgggtggccgg 281
>dbj|AK061448.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-E03, full insert sequence Length = 1725 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||| || || ||||| ||||| |||||||||||||| |||| | ||| Sbjct: 223 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 282 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 283 cagctgggctgggtggccgg 302
>dbj|AK061444.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-C11, full insert sequence Length = 1662 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||| || || ||||| ||||| |||||||||||||| |||| | ||| Sbjct: 200 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 259 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 260 cagctgggctgggtggccgg 279
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123469 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||| || || ||||| ||||| |||||||||||||| |||| | ||| Sbjct: 87821 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 87762 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 87761 cagctgggctgggtggccgg 87742 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||| || || ||||| ||||| |||||||||||||| |||| | ||| Sbjct: 62552 gcgcacatcatcaccgccgtcatcggctccggcgtgctgtcgctggcgtgggcgatcgcg 62611 Query: 301 cagctgggatgggtggccgg 320 |||||||| ||||||||||| Sbjct: 62612 cagctgggctgggtggccgg 62631
>dbj|AK102763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D14, full insert sequence Length = 1890 Score = 69.9 bits (35), Expect = 6e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||| ||||| ||||| || || || |||| |||| Sbjct: 241 gcgcacatcatcacggcggtgatcggctccggcgtgctctctctcgcatgggcaacggcg 300 Query: 301 cagctgggatgggtggccgggccggtg 327 ||||| || ||||||| |||||||||| Sbjct: 301 cagctcggctgggtggtcgggccggtg 327
>dbj|AK058304.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H01, full insert sequence Length = 1823 Score = 69.9 bits (35), Expect = 6e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 |||||||||||||||||||||||||| ||||| ||||| || || || |||| |||| Sbjct: 238 gcgcacatcatcacggcggtgatcggctccggcgtgctctctctcgcatgggcaacggcg 297 Query: 301 cagctgggatgggtggccgggccggtg 327 ||||| || ||||||| |||||||||| Sbjct: 298 cagctcggctgggtggtcgggccggtg 324
>gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10, complete sequence Length = 140282 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/72 (87%), Gaps = 2/72 (2%) Strand = Plus / Plus Query: 253 acggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctgggatgg 312 |||||||||||||| ||||| |||||| | ||||| ||| ||||| ||||||||| ||| Sbjct: 17002 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtg--gcagctgggttgg 17059 Query: 313 gtggccgggccg 324 |||||||||||| Sbjct: 17060 gtggccgggccg 17071
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0425F05 Length = 162858 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 ||||||||| ||||||||||| |||| ||||| |||||||||||||| ||| | |||| Sbjct: 129589 gcgcacatcgtcacggcggtggtcggctccggcgtgctgtcgctggcatggtccacggcg 129530 Query: 301 cagctgggatgggtggccgggccgg 325 ||||| || ||||| ||||| |||| Sbjct: 129529 cagctcggctgggtcgccggcccgg 129505 Score = 46.1 bits (23), Expect = 0.092 Identities = 41/47 (87%) Strand = Plus / Minus Query: 344 ccgtcgtcacctacgtctccgcctccctcctctccgactgctaccgc 390 |||||||||||||| |||| | |||||||| |||||||||||||| Sbjct: 139700 ccgtcgtcacctactactcctcggccctcctcgccgactgctaccgc 139654
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 ||||||||| ||||||||||| |||| ||||| |||||||||||||| ||| | |||| Sbjct: 25142 gcgcacatcgtcacggcggtggtcggctccggcgtgctgtcgctggcatggtccacggcg 25083 Query: 301 cagctgggatgggtggccgggccgg 325 ||||| || ||||| ||||| |||| Sbjct: 25082 cagctcggctgggtcgccggcccgg 25058 Score = 46.1 bits (23), Expect = 0.092 Identities = 41/47 (87%) Strand = Plus / Minus Query: 344 ccgtcgtcacctacgtctccgcctccctcctctccgactgctaccgc 390 |||||||||||||| |||| | |||||||| |||||||||||||| Sbjct: 35253 ccgtcgtcacctactactcctcggccctcctcgccgactgctaccgc 35207
>dbj|AK106762.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-E07, full insert sequence Length = 1726 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcg 300 ||||||||| ||||||||||| |||| ||||| |||||||||||||| ||| | |||| Sbjct: 273 gcgcacatcgtcacggcggtggtcggctccggcgtgctgtcgctggcatggtccacggcg 332 Query: 301 cagctgggatgggtggccgggccgg 325 ||||| || ||||| ||||| |||| Sbjct: 333 cagctcggctgggtcgccggcccgg 357
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/72 (87%), Gaps = 2/72 (2%) Strand = Plus / Plus Query: 253 acggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctgggatgg 312 |||||||||||||| ||||| |||||| | ||||| ||| ||||| ||||||||| ||| Sbjct: 89741 acggcggtgatcggctccggcgtgctggcactggcgtggagcgtg--gcagctgggttgg 89798 Query: 313 gtggccgggccg 324 |||||||||||| Sbjct: 89799 gtggccgggccg 89810
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 258 ggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctgggatgggtggc 317 |||||| || ||||| |||||| | || || ||| |||||||||||||||| |||||||| Sbjct: 2456155 ggtgattggctccggcgtgctggcactagcgtggagcgtggcgcagctgggttgggtggc 2456214 Query: 318 cgggccg 324 ||||||| Sbjct: 2456215 cgggccg 2456221
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 258 ggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctgggatgggtggc 317 |||||| || ||||| |||||| | || || ||| |||||||||||||||| |||||||| Sbjct: 2456265 ggtgattggctccggcgtgctggcactagcgtggagcgtggcgcagctgggttgggtggc 2456324 Query: 318 cgggccg 324 ||||||| Sbjct: 2456325 cgggccg 2456331
>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09, complete sequence Length = 106057 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 258 ggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctgggatgggtggc 317 |||||| || ||||| |||||| | || || ||| |||||||||||||||| |||||||| Sbjct: 28651 ggtgattggctccggcgtgctggcactagcgtggagcgtggcgcagctgggttgggtggc 28710 Query: 318 cgggccg 324 ||||||| Sbjct: 28711 cgggccg 28717
>dbj|AK069508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020L23, full insert sequence Length = 1819 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 254 cggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctgggatggg 313 |||||||| |||| ||||| |||||| ||||||| ||| |||||||||||||| |||| Sbjct: 181 cggcggtggtcggctccggcgtgctggcgctggcgtggacggtggcgcagctggggtggg 240 Query: 314 tgg 316 ||| Sbjct: 241 tgg 243
>gb|AY109232.1| Zea mays PCO115240 mRNA sequence Length = 1756 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 249 catcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctggg 308 |||||| || ||||| || ||||| |||||| ||||| ||||| ||||||||||| |||| Sbjct: 145 catcaccgccgtgataggctccggcgtgctggcgctgccctggagcgtggcgcagatggg 204 Query: 309 atgggt 314 ||||| Sbjct: 205 ctgggt 210 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 350 tcacctacgtctccgcctccctcctctccgactgctaccgc 390 |||||||| || ||||| |||||| ||||||||||||||| Sbjct: 246 tcacctacttcaccgccgtcctcctgtccgactgctaccgc 286
>ref|NM_100875.1| Arabidopsis thaliana AAP8; amino acid permease AT1G10010 (AAP8) mRNA, complete cds Length = 1428 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggg 292 |||||||| ||||||||||| || || || |||||||||||| |||| |||| Sbjct: 109 gcgcacataatcacggcggtcataggctcaggggtgctgtcgttggcttggg 160
>gb|AC004122.1| Arabidopsis thaliana chromosome I BAC T27I1 genomic sequence, complete sequence Length = 67878 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggg 292 |||||||| ||||||||||| || || || |||||||||||| |||| |||| Sbjct: 11398 gcgcacataatcacggcggtcataggctcaggggtgctgtcgttggcttggg 11449
>gb|DQ446241.1| Arabidopsis thaliana clone pENTR221-At1g10010 amino acid permease (At1g10010) mRNA, complete cds Length = 591 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 241 gcgcacatcatcacggcggtgatcgggtccggggtgctgtcgctggcctggg 292 |||||||| ||||||||||| || || || |||||||||||| |||| |||| Sbjct: 109 gcgcacataatcacggcggtcataggctcaggggtgctgtcgttggcttggg 160
>ref|NM_190140.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1596 Score = 46.1 bits (23), Expect = 0.092 Identities = 56/67 (83%) Strand = Plus / Plus Query: 249 catcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctggg 308 |||||| || ||||||||||| || |||||| ||||| | ||| ||||||| ||| |||| Sbjct: 288 catcaccgccgtgatcgggtcaggcgtgctggcgctgccgtggagcgtggcccagatggg 347 Query: 309 atgggtg 315 |||||| Sbjct: 348 gtgggtg 354
>dbj|AK121636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051N12, full insert sequence Length = 1756 Score = 46.1 bits (23), Expect = 0.092 Identities = 56/67 (83%) Strand = Plus / Plus Query: 249 catcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctggg 308 |||||| || ||||||||||| || |||||| ||||| | ||| ||||||| ||| |||| Sbjct: 167 catcaccgccgtgatcgggtcaggcgtgctggcgctgccgtggagcgtggcccagatggg 226 Query: 309 atgggtg 315 |||||| Sbjct: 227 gtgggtg 233
>dbj|AK119529.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C05, full insert sequence Length = 1598 Score = 46.1 bits (23), Expect = 0.092 Identities = 56/67 (83%) Strand = Plus / Plus Query: 249 catcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctggg 308 |||||| || ||||||||||| || |||||| ||||| | ||| ||||||| ||| |||| Sbjct: 106 catcaccgccgtgatcgggtcaggcgtgctggcgctgccgtggagcgtggcccagatggg 165 Query: 309 atgggtg 315 |||||| Sbjct: 166 gtgggtg 172
>dbj|AK106814.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-D01, full insert sequence Length = 1749 Score = 46.1 bits (23), Expect = 0.092 Identities = 41/47 (87%) Strand = Plus / Plus Query: 344 ccgtcgtcacctacgtctccgcctccctcctctccgactgctaccgc 390 |||||||||||||| |||| | |||||||| |||||||||||||| Sbjct: 307 ccgtcgtcacctactactcctcggccctcctcgccgactgctaccgc 353
>dbj|AK065286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M14, full insert sequence Length = 1618 Score = 46.1 bits (23), Expect = 0.092 Identities = 56/67 (83%) Strand = Plus / Plus Query: 249 catcacggcggtgatcgggtccggggtgctgtcgctggcctggggcgtggcgcagctggg 308 |||||| || ||||||||||| || |||||| ||||| | ||| ||||||| ||| |||| Sbjct: 167 catcaccgccgtgatcgggtcaggcgtgctggcgctgccgtggagcgtggcccagatggg 226 Query: 309 atgggtg 315 |||||| Sbjct: 227 gtgggtg 233
>ref|XM_361374.1| Magnaporthe grisea 70-15 hypothetical protein (MG03848.4) partial mRNA Length = 2463 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 329 gcatgctctgcttcgccgtcgtcacc 354 |||| ||||||||||||||||||||| Sbjct: 4 gcatcctctgcttcgccgtcgtcacc 29
>gb|AE004886.1| Pseudomonas aeruginosa PAO1, section 447 of 529 of the complete genome Length = 10929 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 281 cgctggcctggggcgtggcgca 302 |||||||||||||||||||||| Sbjct: 1446 cgctggcctggggcgtggcgca 1467
>dbj|AK071510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095G15, full insert sequence Length = 1150 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 369 cctcctctccgactgctaccgc 390 |||||||||||||||||||||| Sbjct: 91 cctcctctccgactgctaccgc 112
>dbj|AB045630.1| Pseudomonas aeruginosa genes for glutamate-tRNA synthetase, CbrA, CbrB, complete cds Length = 6979 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 281 cgctggcctggggcgtggcgca 302 |||||||||||||||||||||| Sbjct: 1089 cgctggcctggggcgtggcgca 1110
>ref|XM_589710.2| PREDICTED: Bos taurus similar to period 2 isoform 1 (LOC512237), mRNA Length = 3867 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 tgtcgctggcctggggcgtgg 298 ||||||||||||||||||||| Sbjct: 1876 tgtcgctggcctggggcgtgg 1856
>ref|XM_676034.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7857.2), mRNA Length = 936 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 365 cctccctcctctccgactgct 385 ||||||||||||||||||||| Sbjct: 77 cctccctcctctccgactgct 97
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 tgaaccccccattaattctcc 84 ||||||||||||||||||||| Sbjct: 1706000 tgaaccccccattaattctcc 1706020
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 gtccggggtgctgtcgctggc 287 ||||||||||||||||||||| Sbjct: 3124406 gtccggggtgctgtcgctggc 3124426
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 274 gtgctgtcgctggcctggggcgtgg 298 ||||||||||||||||| ||||||| Sbjct: 1743689 gtgctgtcgctggcctgcggcgtgg 1743713
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 gcccgccccggaccgggaccg 226 ||||||||||||||||||||| Sbjct: 2058345 gcccgccccggaccgggaccg 2058365
>dbj|AB024602.1| Pseudomonas putida dapD gene for tetrahydrodipicolinate N-succinyltransferase, complete cds, strain KT2440 Length = 12537 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 274 gtgctgtcgctggcctggggcgtgg 298 ||||||||||||||||| ||||||| Sbjct: 9048 gtgctgtcgctggcctgcggcgtgg 9072
>gb|AY596296.1| Haloarcula marismortui ATCC 43049 plasmid pNG700, complete sequence Length = 410554 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gccggtgcgacgacgacggg 204 |||||||||||||||||||| Sbjct: 329667 gccggtgcgacgacgacggg 329648
>gb|AC113444.9| Mus musculus chromosome 15, clone RP23-268C9, complete sequence Length = 189539 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tctccgcctccctcctctcc 378 |||||||||||||||||||| Sbjct: 42233 tctccgcctccctcctctcc 42214
>gb|AF496428.1| Lactobacillus delbrueckii subsp. lactis cell division protein FTSh gene, partial cds Length = 318 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 gatgggtggccgggccggtg 327 |||||||||||||||||||| Sbjct: 95 gatgggtggccgggccggtg 114
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgctggcctggggcgtggcg 300 |||||||||||||||||||| Sbjct: 2507932 cgctggcctggggcgtggcg 2507913
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgctggcctggggcgtggcg 300 |||||||||||||||||||| Sbjct: 564571 cgctggcctggggcgtggcg 564552
>gb|AE005091.1| Halobacterium sp. NRC-1 section 122 of 170 of the complete genome Length = 12431 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gatcgggtccggggtgctgt 280 |||||||||||||||||||| Sbjct: 4286 gatcgggtccggggtgctgt 4267
>gb|AF080542.1|AF080542 Nepenthes alata amino acid transporter (AAP1) mRNA, partial cds Length = 1136 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 298 gcgcagctgggatgggtggccgggccgg 325 ||||||||||| |||||||| ||||||| Sbjct: 43 gcgcagctgggttgggtggcggggccgg 70
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gcccgccccggaccgggacc 225 |||||||||||||||||||| Sbjct: 60837 gcccgccccggaccgggacc 60818 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,663,412 Number of Sequences: 3902068 Number of extensions: 2663412 Number of successful extensions: 52784 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51460 Number of HSP's gapped (non-prelim): 1313 length of query: 424 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 402 effective length of database: 17,147,199,772 effective search space: 6893174308344 effective search space used: 6893174308344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
