ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast70d05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479148.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1468 Score = 180 bits (91), Expect = 3e-42 Identities = 191/221 (86%), Gaps = 5/221 (2%) Strand = Plus / Plus Query: 239 aacctcctccaggggctggagaagctgggggaagggcggctaagcgcgccggaggacgtg 298 |||||||||||| ||||||||||| ||||||||| ||| |||||||||||||||||| Sbjct: 183 aacctcctccagaatctggagaagcttggggaagggatgctgagcgcgccggaggacgtg 242 Query: 299 tacgtggacg-cggcggcgggcggggcgctgtacacggcgacgagggacgggtggctgca 357 |||||||||| || |||||| || || ||| |||||||||||||||||||||| ||| Sbjct: 243 tacgtggacgacgccggcgg-cgagg---tgttcacggcgacgagggacgggtgggtgcg 298 Query: 358 gaggatgcaccccaacgggacgtgggagcgctggcggttcgtcggcggcacgggcctgct 417 ||||||||| | |||||| |||||||||| ||| || |||||||||||||||| || || Sbjct: 299 gaggatgcaggcgaacgggtcgtgggagcggtgggggctcgtcggcggcacggggctcct 358 Query: 418 cggcatcgcgccctccgccgacggcaccatgctcgtctgcg 458 |||| |||| || |||||||||||| ||||||||||||||| Sbjct: 359 cggcgtcgccccgtccgccgacggcgccatgctcgtctgcg 399 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 167 cacgtcgcgctcaactgccccatccagccg 196 |||||||||||| ||||||||||||||||| Sbjct: 102 cacgtcgcgctccactgccccatccagccg 131
>dbj|AK109489.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A10, full insert sequence Length = 1468 Score = 180 bits (91), Expect = 3e-42 Identities = 191/221 (86%), Gaps = 5/221 (2%) Strand = Plus / Plus Query: 239 aacctcctccaggggctggagaagctgggggaagggcggctaagcgcgccggaggacgtg 298 |||||||||||| ||||||||||| ||||||||| ||| |||||||||||||||||| Sbjct: 183 aacctcctccagaatctggagaagcttggggaagggatgctgagcgcgccggaggacgtg 242 Query: 299 tacgtggacg-cggcggcgggcggggcgctgtacacggcgacgagggacgggtggctgca 357 |||||||||| || |||||| || || ||| |||||||||||||||||||||| ||| Sbjct: 243 tacgtggacgacgccggcgg-cgagg---tgttcacggcgacgagggacgggtgggtgcg 298 Query: 358 gaggatgcaccccaacgggacgtgggagcgctggcggttcgtcggcggcacgggcctgct 417 ||||||||| | |||||| |||||||||| ||| || |||||||||||||||| || || Sbjct: 299 gaggatgcaggcgaacgggtcgtgggagcggtgggggctcgtcggcggcacggggctcct 358 Query: 418 cggcatcgcgccctccgccgacggcaccatgctcgtctgcg 458 |||| |||| || |||||||||||| ||||||||||||||| Sbjct: 359 cggcgtcgccccgtccgccgacggcgccatgctcgtctgcg 399 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 167 cacgtcgcgctcaactgccccatccagccg 196 |||||||||||| ||||||||||||||||| Sbjct: 102 cacgtcgcgctccactgccccatccagccg 131
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 174 bits (88), Expect = 2e-40 Identities = 179/206 (86%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 254 ctggagaagctgggggaagggcggctaagcgcgccggaggacgtgtacgtggacg-cggc 312 ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| || | Sbjct: 25234302 ctggagaagcttggggaagggatgctgagcgcgccggaggacgtgtacgtggacgacgcc 25234361 Query: 313 ggcgggcggggcgctgtacacggcgacgagggacgggtggctgcagaggatgcaccccaa 372 ||||| || || ||| |||||||||||||||||||||| ||| ||||||||| | || Sbjct: 25234362 ggcgg-cgagg---tgttcacggcgacgagggacgggtgggtgcggaggatgcaggcgaa 25234417 Query: 373 cgggacgtgggagcgctggcggttcgtcggcggcacgggcctgctcggcatcgcgccctc 432 |||| |||||||||| ||| || |||||||||||||||| || |||||| |||| || || Sbjct: 25234418 cgggtcgtgggagcggtgggggctcgtcggcggcacggggctcctcggcgtcgccccgtc 25234477 Query: 433 cgccgacggcaccatgctcgtctgcg 458 |||||||||| ||||||||||||||| Sbjct: 25234478 cgccgacggcgccatgctcgtctgcg 25234503 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 167 cacgtcgcgctcaactgccccatccagccg 196 |||||||||||| ||||||||||||||||| Sbjct: 25234123 cacgtcgcgctccactgccccatccagccg 25234152 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 360 ggatgcaccccaacgggacgtgggagcgctggcggttcgtcggcggcacgggcctgc 416 ||||||||||||| ||| ||||||| || ||||| ||| ||||||||| ||||||| Sbjct: 15957518 ggatgcaccccaaagggtcgtgggaacggtggcgcttcatcggcggcaacggcctgc 15957574 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 ggctggagaagctgggggaagggc 275 ||||||||||||| |||||||||| Sbjct: 15957440 ggctggagaagctcggggaagggc 15957463 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 3160213 ccgtcgccgccgccgcccgc 3160232
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 174 bits (88), Expect = 2e-40 Identities = 179/206 (86%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 254 ctggagaagctgggggaagggcggctaagcgcgccggaggacgtgtacgtggacg-cggc 312 ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| || | Sbjct: 50973 ctggagaagcttggggaagggatgctgagcgcgccggaggacgtgtacgtggacgacgcc 51032 Query: 313 ggcgggcggggcgctgtacacggcgacgagggacgggtggctgcagaggatgcaccccaa 372 ||||| || || ||| |||||||||||||||||||||| ||| ||||||||| | || Sbjct: 51033 ggcgg-cgagg---tgttcacggcgacgagggacgggtgggtgcggaggatgcaggcgaa 51088 Query: 373 cgggacgtgggagcgctggcggttcgtcggcggcacgggcctgctcggcatcgcgccctc 432 |||| |||||||||| ||| || |||||||||||||||| || |||||| |||| || || Sbjct: 51089 cgggtcgtgggagcggtgggggctcgtcggcggcacggggctcctcggcgtcgccccgtc 51148 Query: 433 cgccgacggcaccatgctcgtctgcg 458 |||||||||| ||||||||||||||| Sbjct: 51149 cgccgacggcgccatgctcgtctgcg 51174 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 167 cacgtcgcgctcaactgccccatccagccg 196 |||||||||||| ||||||||||||||||| Sbjct: 50794 cacgtcgcgctccactgccccatccagccg 50823
>dbj|AK069163.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006C12, full insert sequence Length = 1431 Score = 172 bits (87), Expect = 6e-40 Identities = 190/221 (85%), Gaps = 5/221 (2%) Strand = Plus / Plus Query: 239 aacctcctccaggggctggagaagctgggggaagggcggctaagcgcgccggaggacgtg 298 |||||||||||| ||||||||||| ||||||||| ||| |||||||||||||||||| Sbjct: 245 aacctcctccagaatctggagaagcttggggaagggatgctgagcgcgccggaggacgtg 304 Query: 299 tacgtggacg-cggcggcgggcggggcgctgtacacggcgacgagggacgggtggctgca 357 |||||||||| || |||||| || || ||| |||||||||||||||||||||| ||| Sbjct: 305 tacgtggacgacgccggcgg-cgagg---tgttcacggcgacgagggacgggtgggtgcg 360 Query: 358 gaggatgcaccccaacgggacgtgggagcgctggcggttcgtcggcggcacgggcctgct 417 ||||||||| | |||||| |||||||||| ||| || |||||||||||||||| || || Sbjct: 361 gaggatgcaggcgaacgggtcgtgggagcggtgggggctcgtcggcggcacggggctcct 420 Query: 418 cggcatcgcgccctccgccgacggcaccatgctcgtctgcg 458 |||| |||| || ||||||||||| ||||||||||||||| Sbjct: 421 cggcgtcgccccgtccgccgacgggcccatgctcgtctgcg 461 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 167 cacgtcgcgctcaactgccccatccagccg 196 |||||||||||| ||||||||||||||||| Sbjct: 164 cacgtcgcgctccactgccccatccagccg 193
>ref|NM_187187.1| Oryza sativa (japonica cultivar-group), mRNA Length = 213 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 360 ggatgcaccccaacgggacgtgggagcgctggcggttcgtcggcggcacgggcctgc 416 ||||||||||||| ||| ||||||| || ||||| ||| ||||||||| ||||||| Sbjct: 86 ggatgcaccccaaagggtcgtgggaacggtggcgcttcatcggcggcaacggcctgc 142 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 ggctggagaagctgggggaagggc 275 ||||||||||||| |||||||||| Sbjct: 8 ggctggagaagctcggggaagggc 31
>gb|AE004142.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 50 of 251 of the complete chromosome Length = 10566 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 133 ggcggcggtggccgtggtcgtttcggtggcggt 165 |||||||||||||||||| ||||||| |||||| Sbjct: 2417 ggcggcggtggccgtggtggtttcggcggcggt 2449
>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0040K22 Length = 155832 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 360 ggatgcaccccaacgggacgtgggagcgctggcggttcgtcggcggcacgggcctgc 416 ||||||||||||| ||| ||||||| || ||||| ||| ||||||||| ||||||| Sbjct: 38920 ggatgcaccccaaagggtcgtgggaacggtggcgcttcatcggcggcaacggcctgc 38976 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 ggctggagaagctgggggaagggc 275 ||||||||||||| |||||||||| Sbjct: 38842 ggctggagaagctcggggaagggc 38865
>gb|AC162614.2| Mus musculus chromosome 7, clone RP23-421O10, complete sequence Length = 219414 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 190 ccagccggtcccgtcgccgccgccgccc 217 ||||||||||||| |||||||||||||| Sbjct: 86740 ccagccggtcccgccgccgccgccgccc 86713
>gb|AY340221.1| Mus musculus strain Tsk transforming growth factor-beta 1 (Tgfb1) gene, promoters 1 and 2 and partial cds Length = 2717 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 190 ccagccggtcccgtcgccgccgccgccc 217 ||||||||||||| |||||||||||||| Sbjct: 1837 ccagccggtcccgccgccgccgccgccc 1864
>gb|AY342403.1| Mus musculus strain C57BL/6 transforming growth factor-beta 1 (Tgfb1) gene, promoter 1 and 2 and partial cds Length = 2717 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 190 ccagccggtcccgtcgccgccgccgccc 217 ||||||||||||| |||||||||||||| Sbjct: 1837 ccagccggtcccgccgccgccgccgccc 1864
>gb|M57902.1|MUSTGFB1 Mus musculus transforming growth factor-beta 1 (TGF-beta-1) gene, promoters 1 and 2 and partial cds Length = 2716 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 190 ccagccggtcccgtcgccgccgccgccc 217 ||||||||||||| |||||||||||||| Sbjct: 1837 ccagccggtcccgccgccgccgccgccc 1864
>gb|L42456.1|MUSTGF1G01 Mus musculus TGF-1 gene, promoter region and exon 1 Length = 5531 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 190 ccagccggtcccgtcgccgccgccgccc 217 ||||||||||||| |||||||||||||| Sbjct: 4015 ccagccggtcccgccgccgccgccgccc 4042
>ref|XM_958769.1| Neurospora crassa OR74A hypothetical protein (NCU03092.1) partial mRNA Length = 1287 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 ggcggtggccgtggtcgtttcggtggc 162 ||||||||||||||| ||||||||||| Sbjct: 1141 ggcggtggccgtggtggtttcggtggc 1167
>ref|XM_330527.1| Neurospora crassa OR74A hypothetical protein (NCU03092.1) partial mRNA Length = 1287 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 136 ggcggtggccgtggtcgtttcggtggc 162 ||||||||||||||| ||||||||||| Sbjct: 1141 ggcggtggccgtggtggtttcggtggc 1167
>ref|XM_493741.2| Oryza sativa (japonica cultivar-group), mRNA Length = 887 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 200 ccgtcgccgccgccgcccgcca 221 |||||||||||||||||||||| Sbjct: 53 ccgtcgccgccgccgcccgcca 74
>ref|XM_710424.1| Candida albicans SC5314 hypothetical protein (CaO19_10650), mRNA Length = 951 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 139 ggtggccgtggtcgtttcggtggcgg 164 |||||||||||| ||||||||||||| Sbjct: 43 ggtggccgtggtggtttcggtggcgg 68
>ref|XM_710423.1| Candida albicans SC5314 hypothetical protein (CaO19_10649), mRNA Length = 321 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 139 ggtggccgtggtcgtttcggtggcgg 164 |||||||||||| ||||||||||||| Sbjct: 257 ggtggccgtggtggtttcggtggcgg 232
>ref|XM_710354.1| Candida albicans SC5314 hypothetical protein (CaO19_3138), mRNA Length = 951 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 139 ggtggccgtggtcgtttcggtggcgg 164 |||||||||||| ||||||||||||| Sbjct: 43 ggtggccgtggtggtttcggtggcgg 68
>ref|XM_710353.1| Candida albicans SC5314 hypothetical protein (CaO19_3137), mRNA Length = 321 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 139 ggtggccgtggtcgtttcggtggcgg 164 |||||||||||| ||||||||||||| Sbjct: 257 ggtggccgtggtggtttcggtggcgg 232
>gb|DQ020495.1| Homo sapiens neuroblastoma apoptosis-related protease mRNA, complete cds Length = 11823 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 192 agccggtcccgtcgccgccgccgccc 217 ||||||||||| |||||||||||||| Sbjct: 651 agccggtcccgccgccgccgccgccc 676
>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12 Length = 294800 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 tgggcacggcggcggtggccgt 147 |||||||||||||||||||||| Sbjct: 179744 tgggcacggcggcggtggccgt 179723 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 ttcgtcggcggcacgggcct 414 |||||||||||||||||||| Sbjct: 192987 ttcgtcggcggcacgggcct 192968
>emb|AJ439398.1|AGA439398 Anopheles gambiae BAC clone 22J3 Length = 95527 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 196 ggtcccgtcgccgccgccgccc 217 |||||||||||||||||||||| Sbjct: 80676 ggtcccgtcgccgccgccgccc 80697
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 200 ccgtcgccgccgccgcccgcca 221 |||||||||||||||||||||| Sbjct: 2245633 ccgtcgccgccgccgcccgcca 2245612
>gb|AC012493.9| Homo sapiens BAC clone RP11-292K15 from 2, complete sequence Length = 170404 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 192 agccggtcccgtcgccgccgccgccc 217 ||||||||||| |||||||||||||| Sbjct: 31170 agccggtcccgccgccgccgccgccc 31145
>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0535G04 Length = 154180 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 200 ccgtcgccgccgccgcccgcca 221 |||||||||||||||||||||| Sbjct: 105090 ccgtcgccgccgccgcccgcca 105069
>dbj|AK071423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098B10, full insert sequence Length = 887 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 200 ccgtcgccgccgccgcccgcca 221 |||||||||||||||||||||| Sbjct: 53 ccgtcgccgccgccgcccgcca 74
>ref|XM_510462.1| PREDICTED: Pan troglodytes similar to sarcomeric tropomyosin kappa; TPM1-kappa (LOC453495), mRNA Length = 3009 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 ggctaagcgcgccggaggacg 296 ||||||||||||||||||||| Sbjct: 1949 ggctaagcgcgccggaggacg 1969
>ref|XM_482827.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1176 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 303 tggacgcggcggcgggcggggcgct 327 ||||||||||||||| ||||||||| Sbjct: 313 tggacgcggcggcggccggggcgct 289
>ref|XM_468134.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1302 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 cgtggacgcggcggcgggcgg 321 ||||||||||||||||||||| Sbjct: 654 cgtggacgcggcggcgggcgg 634
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 acgtggacgcggcggcgggcg 320 ||||||||||||||||||||| Sbjct: 633609 acgtggacgcggcggcgggcg 633589 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 gtggacgcggcggcgggcggggcg 325 |||||||||||||||||| ||||| Sbjct: 537199 gtggacgcggcggcgggccgggcg 537176
>gb|AC073054.2| Homo sapiens BAC clone RP11-106F1 from 7, complete sequence Length = 154419 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 aggggctggagaagctggggg 269 ||||||||||||||||||||| Sbjct: 109707 aggggctggagaagctggggg 109687
>gb|BC087716.1| Rattus norvegicus acyl-CoA thioesterase 7, mRNA (cDNA clone MGC:105261 IMAGE:7316866), complete cds Length = 1460 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 ccgtcgccgccgccgcccgcc 220 ||||||||||||||||||||| Sbjct: 32 ccgtcgccgccgccgcccgcc 52
>emb|BX511006.10| Zebrafish DNA sequence from clone DKEY-106F13 in linkage group 7, complete sequence Length = 220514 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 251 gggctggagaagctgggggaagggc 275 |||||||||||| |||||||||||| Sbjct: 152600 gggctggagaagatgggggaagggc 152576
>ref|NM_013214.3| Rattus norvegicus acyl-CoA thioesterase 7 (Acot7), mRNA Length = 1494 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 ccgtcgccgccgccgcccgcc 220 ||||||||||||||||||||| Sbjct: 66 ccgtcgccgccgccgcccgcc 86
>gb|AC133000.5| Rattus Norvegicus Strain CH230-62B6 BAC, BN/SsNHsd/MCW, complete sequence Length = 245581 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 ctgcagaggatgcaccccaac 373 ||||||||||||||||||||| Sbjct: 115640 ctgcagaggatgcaccccaac 115660
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 ctccgccgacggcaccatgct 450 ||||||||||||||||||||| Sbjct: 1976263 ctccgccgacggcaccatgct 1976283
>gb|AC055120.5| Homo sapiens BAC clone RP11-336N6 from 4, complete sequence Length = 178524 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 gccggtcccgtcgccgccgcc 213 ||||||||||||||||||||| Sbjct: 107749 gccggtcccgtcgccgccgcc 107769
>gb|DP000004.1| Lemur catta target 1 genomic scaffold Length = 1399362 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 cgcggcggcgggcggggcgct 327 ||||||||||||||||||||| Sbjct: 421882 cgcggcggcgggcggggcgct 421902
>gb|L26042.1|TORCCMLE Trichosporon cutaneum cis,cis-muconate lactonizing enzyme precursor, mRNA, complete cds Length = 1160 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 238 taacctcctccaggggctggagaag 262 ||||||||||||||||| ||||||| Sbjct: 393 taacctcctccaggggcaggagaag 417
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 303 tggacgcggcggcgggcggggcgct 327 ||||||||||||||| ||||||||| Sbjct: 22802000 tggacgcggcggcggccggggcgct 22801976
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 cgtggacgcggcggcgggcgg 321 ||||||||||||||||||||| Sbjct: 33268947 cgtggacgcggcggcgggcgg 33268927 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 cggcggcggtggccgtggtcg 152 ||||||||||||||||||||| Sbjct: 22453012 cggcggcggtggccgtggtcg 22453032 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 26118083 ccgtcgccgccgccgcccgc 26118102 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 tcccgtcgccgccgccgccc 217 |||||||||||||||||||| Sbjct: 4150460 tcccgtcgccgccgccgccc 4150441
>gb|AC106886.3| Homo sapiens chromosome 16 clone RP11-2C24, complete sequence Length = 207950 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cgtcgccgccgccgcccgcca 221 ||||||||||||||||||||| Sbjct: 38598 cgtcgccgccgccgcccgcca 38618
>gb|AC093249.4| Homo sapiens chromosome 16 clone RP11-146F11, complete sequence Length = 185664 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 cgtcgccgccgccgcccgcca 221 ||||||||||||||||||||| Sbjct: 47428 cgtcgccgccgccgcccgcca 47408
>gb|AC136926.4| Rattus Norvegicus Strain CH230-163A18 BAC, BN/SsNHsd/MCW, complete sequence Length = 214942 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 ctgcagaggatgcaccccaac 373 ||||||||||||||||||||| Sbjct: 206709 ctgcagaggatgcaccccaac 206729
>gb|AC123970.3| Lemur catta clone LB2-159J16, complete sequence Length = 183268 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 cgcggcggcgggcggggcgct 327 ||||||||||||||||||||| Sbjct: 155931 cgcggcggcgggcggggcgct 155951
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 gcggcggcgggcggggcgctg 328 ||||||||||||||||||||| Sbjct: 4188295 gcggcggcgggcggggcgctg 4188315 Score = 40.1 bits (20), Expect = 6.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 193 gccggtcccgtcgccgc-cgccgcccgc 219 ||||||||||||||||| |||||||||| Sbjct: 4820428 gccggtcccgtcgccgcgcgccgcccgc 4820401 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 405895 ccgtcgccgccgccgcccgc 405876
>gb|AC011545.4|AC011545 Homo sapiens chromosome 19, cosmid R30477 (LLNL-R_266D1), complete sequence Length = 38611 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 cccgtcgccgccgccgcccgc 219 ||||||||||||||||||||| Sbjct: 5900 cccgtcgccgccgccgcccgc 5880
>dbj|AP005800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016D04 Length = 147313 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 cggcggcggtggccgtggtcg 152 ||||||||||||||||||||| Sbjct: 23368 cggcggcggtggccgtggtcg 23388
>dbj|AP003999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_A05 Length = 113326 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 cggcggcggtggccgtggtcg 152 ||||||||||||||||||||| Sbjct: 109231 cggcggcggtggccgtggtcg 109251
>emb|BX813307.3| Mouse DNA sequence from clone RP23-454B5 on chromosome 7, complete sequence Length = 30174 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 ctgtgctgccagcagccagta 37 ||||||||||||||||||||| Sbjct: 322 ctgtgctgccagcagccagta 342
>emb|BX539342.9| Mouse DNA sequence from clone RP24-67F19 on chromosome 7, complete sequence Length = 155752 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 ctgtgctgccagcagccagta 37 ||||||||||||||||||||| Sbjct: 154074 ctgtgctgccagcagccagta 154094
>dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_D08 Length = 163702 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 cgtggacgcggcggcgggcgg 321 ||||||||||||||||||||| Sbjct: 98256 cgtggacgcggcggcgggcgg 98236
>dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1715_H01 Length = 138733 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 cgtggacgcggcggcgggcgg 321 ||||||||||||||||||||| Sbjct: 9697 cgtggacgcggcggcgggcgg 9677
>dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1116H04 Length = 140142 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 303 tggacgcggcggcgggcggggcgct 327 ||||||||||||||| ||||||||| Sbjct: 128642 tggacgcggcggcggccggggcgct 128618
>emb|AJ335082.1|HSA335082 Homo sapiens genomic sequence surrounding NotI site, clone NL1-YA14C Length = 690 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cgtcgccgccgccgcccgcca 221 ||||||||||||||||||||| Sbjct: 161 cgtcgccgccgccgcccgcca 181
>emb|AJ324112.1|HSA324112 Homo sapiens genomic sequence surrounding NotI site, clone NL1-VI23R Length = 762 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cgtcgccgccgccgcccgcca 221 ||||||||||||||||||||| Sbjct: 161 cgtcgccgccgccgcccgcca 181
>dbj|AK073370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025K23, full insert sequence Length = 1176 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 303 tggacgcggcggcgggcggggcgct 327 ||||||||||||||| ||||||||| Sbjct: 313 tggacgcggcggcggccggggcgct 289
>gb|AC122432.4| Mus musculus BAC clone RP24-187F8 from 7, complete sequence Length = 163515 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 ctgtgctgccagcagccagta 37 ||||||||||||||||||||| Sbjct: 70391 ctgtgctgccagcagccagta 70371
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ggcggcggtggccgtggtcg 152 |||||||||||||||||||| Sbjct: 1464562 ggcggcggtggccgtggtcg 1464543
>gb|AC123656.9| Mus musculus chromosome 15, clone RP23-188M21, complete sequence Length = 200922 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 accagttgggtggtgtgctg 93 |||||||||||||||||||| Sbjct: 175661 accagttgggtggtgtgctg 175680
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 766844 ccgtcgccgccgccgcccgc 766863
>gb|AE010412.1| Methanopyrus kandleri AV19 section 111 of 157 of the complete genome Length = 6205 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 gacgtgtacgtggacgcggcggcg 316 |||| ||||||||||||||||||| Sbjct: 5558 gacgagtacgtggacgcggcggcg 5581
>ref|XM_467050.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1887 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 1802 ccgtcgccgccgccgcccgc 1783
>ref|XM_517157.1| PREDICTED: Pan troglodytes similar to huntingtin interacting protein 2 (LOC461178), mRNA Length = 978 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 133 ggcggcggtggccgtggtcgtttcggtggcgg 164 |||||||||||| |||||||| ||||||||| Sbjct: 81 ggcggcggtggcggtggtcgtagcggtggcgg 112
>ref|NM_191514.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cgtcgccgccgccgcccgcc 220 |||||||||||||||||||| Sbjct: 46 cgtcgccgccgccgcccgcc 27
>ref|NM_001005156.1| Sus scrofa insulin-like growth factor-binding protein 3 (IGFBP-3), mRNA Length = 1106 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 397 cgtcggcggcacgggcctgctcgg 420 ||||||||||||||||| |||||| Sbjct: 171 cgtcggcggcacgggccggctcgg 194
>ref|NM_192755.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1104 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gtcccgtcgccgccgccgcc 216 |||||||||||||||||||| Sbjct: 558 gtcccgtcgccgccgccgcc 577
>ref|XM_469392.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2841 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgcggcggcgggcggggcgc 326 |||||||||||||||||||| Sbjct: 237 cgcggcggcgggcggggcgc 218
>ref|XM_476685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 971 ccgtcgccgccgccgcccgc 952
>gb|AC104283.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1607_F09, complete sequence Length = 95755 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gtggacgcggcggcgggcggggcg 325 |||| ||||||||||||||||||| Sbjct: 9835 gtggtcgcggcggcgggcggggcg 9858
>gb|AC104553.7| Mus musculus chromosome 15, clone RP24-160M22, complete sequence Length = 155191 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 tggagaagctgggggaaggg 274 |||||||||||||||||||| Sbjct: 149596 tggagaagctgggggaaggg 149577
>gb|BC010103.2| Homo sapiens transaldolase 1, mRNA (cDNA clone MGC:19718 IMAGE:3536661), complete cds Length = 1253 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gtcccgtcgccgccgccgcc 216 |||||||||||||||||||| Sbjct: 13 gtcccgtcgccgccgccgcc 32
>gb|BC022804.1| Homo sapiens huntingtin interacting protein 2, mRNA (cDNA clone MGC:39129 IMAGE:4893778), complete cds Length = 976 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 133 ggcggcggtggccgtggtcgtttcggtggcgg 164 |||||||||||| |||||||| ||||||||| Sbjct: 95 ggcggcggtggcggtggtcgtagcggtggcgg 126
>ref|XM_959888.1| Neurospora crassa OR74A hypothetical protein (NCU03122.1) partial mRNA Length = 1398 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ccgccgccgcccgccaagcg 225 |||||||||||||||||||| Sbjct: 1009 ccgccgccgcccgccaagcg 1028
>gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1264_A04, complete sequence Length = 133271 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gtggacgcggcggcgggcggggcg 325 |||| ||||||||||||||||||| Sbjct: 118413 gtggtcgcggcggcgggcggggcg 118436
>ref|XM_330557.1| Neurospora crassa OR74A hypothetical protein (NCU03122.1) partial mRNA Length = 1398 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ccgccgccgcccgccaagcg 225 |||||||||||||||||||| Sbjct: 1009 ccgccgccgcccgccaagcg 1028
>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0074P11, complete sequence Length = 148753 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gacgcggcggcgggcggggc 324 |||||||||||||||||||| Sbjct: 85654 gacgcggcggcgggcggggc 85635
>ref|NM_029098.2| Mus musculus limb region 1 like (Lmbr1l), mRNA Length = 2169 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gccgccgccgcccgccaagc 224 |||||||||||||||||||| Sbjct: 115 gccgccgccgcccgccaagc 96
>ref|NM_005339.3| Homo sapiens huntingtin interacting protein 2 (HIP2), mRNA Length = 2208 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 133 ggcggcggtggccgtggtcgtttcggtggcgg 164 |||||||||||| |||||||| ||||||||| Sbjct: 12 ggcggcggtggcggtggtcgtagcggtggcgg 43
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgcggcggcgggcggggcgc 326 |||||||||||||||||||| Sbjct: 27718214 cgcggcggcgggcggggcgc 27718195 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgcggcggcgggcggggcgc 326 |||||||||||||||||||| Sbjct: 11568796 cgcggcggcgggcggggcgc 11568777
>gb|AC107865.7| Mus musculus chromosome 1, clone RP23-389C9, complete sequence Length = 204959 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 127943 ccgtcgccgccgccgcccgc 127924
>gb|AF085482.1| Sus scrofa insulin-like growth factor-binding protein 3 (IGFBP-3) mRNA, complete cds Length = 1106 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 397 cgtcggcggcacgggcctgctcgg 420 ||||||||||||||||| |||||| Sbjct: 171 cgtcggcggcacgggccggctcgg 194
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 gtggacgcggcggcgggcggggcg 325 |||| ||||||||||||||||||| Sbjct: 2202165 gtggtcgcggcggcgggcggggcg 2202142
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cggcggcggtggccgtggtc 151 |||||||||||||||||||| Sbjct: 486853 cggcggcggtggccgtggtc 486834
>ref|XM_750315.1| Aspergillus fumigatus Af293 RNA helicase Dbp (Afu2g10750) partial mRNA Length = 1698 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gcggcggtggccgtggtcgt 153 |||||||||||||||||||| Sbjct: 1622 gcggcggtggccgtggtcgt 1641
>ref|XM_847261.1| PREDICTED: Canis familiaris similar to forkhead box A1 (LOC490657), mRNA Length = 2109 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cgtcgccgccgccgcccgcc 220 |||||||||||||||||||| Sbjct: 904 cgtcgccgccgccgcccgcc 885
>ref|NM_010879.2| Mus musculus non-catalytic region of tyrosine kinase adaptor protein 2 (Nck2), mRNA Length = 2772 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 79 ccgtcgccgccgccgcccgc 60
>ref|XM_858240.1| PREDICTED: Canis familiaris similar to huntingtin interacting protein 2, transcript variant 4 (LOC609531), mRNA Length = 2239 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 133 ggcggcggtggccgtggtcgtttcggtggcgg 164 |||||||||||| |||||||| ||||||||| Sbjct: 84 ggcggcggtggcggtggtcgtagcggtggcgg 115
>ref|XM_858222.1| PREDICTED: Canis familiaris similar to huntingtin interacting protein 2, transcript variant 3 (LOC609531), mRNA Length = 2337 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 133 ggcggcggtggccgtggtcgtttcggtggcgg 164 |||||||||||| |||||||| ||||||||| Sbjct: 117 ggcggcggtggcggtggtcgtagcggtggcgg 148
>ref|XM_858200.1| PREDICTED: Canis familiaris similar to huntingtin interacting protein 2, transcript variant 2 (LOC609531), mRNA Length = 2287 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 133 ggcggcggtggccgtggtcgtttcggtggcgg 164 |||||||||||| |||||||| ||||||||| Sbjct: 108 ggcggcggtggcggtggtcgtagcggtggcgg 139
>ref|XM_846094.1| PREDICTED: Canis familiaris similar to huntingtin interacting protein 2, transcript variant 1 (LOC609531), mRNA Length = 2412 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 133 ggcggcggtggccgtggtcgtttcggtggcgg 164 |||||||||||| |||||||| ||||||||| Sbjct: 104 ggcggcggtggcggtggtcgtagcggtggcgg 135
>gb|BC009680.2| Homo sapiens transaldolase 1, mRNA (cDNA clone MGC:8922 IMAGE:3898596), complete cds Length = 1246 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gtcccgtcgccgccgccgcc 216 |||||||||||||||||||| Sbjct: 12 gtcccgtcgccgccgccgcc 31
>gb|AY805469.1| Uncultured bacterium clone CR25 carbon monoxide dehydrogenase form II large subunit gene, partial cds Length = 964 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 cggcatcgcgccctccgccg 437 |||||||||||||||||||| Sbjct: 303 cggcatcgcgccctccgccg 322
>gb|BC023397.1| Mus musculus limb region 1 like, mRNA (cDNA clone MGC:32459 IMAGE:5043877), complete cds Length = 2138 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gccgccgccgcccgccaagc 224 |||||||||||||||||||| Sbjct: 51 gccgccgccgcccgccaagc 32
>gb|AC114934.2| Homo sapiens chromosome 5 clone CTD-2029K19, complete sequence Length = 114356 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 accagttgggtggtgtgctgctgt 97 ||||||||||||| |||||||||| Sbjct: 82209 accagttgggtggggtgctgctgt 82186
>emb|AL513477.21| Human DNA sequence from clone RP4-740C4 on chromosome 1 Contains the 3' end of a novel gene (FLJ13941), the gene for RER1 homolog (S. cerevisiae), the PEX10 gene for peroxisome biogenesis factor 10 an novel gene and two CpG islands, complete sequence Length = 106323 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 aggggctggagaagctgggg 268 |||||||||||||||||||| Sbjct: 23231 aggggctggagaagctgggg 23212
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cggcggcggtggccgtggtc 151 |||||||||||||||||||| Sbjct: 2136137 cggcggcggtggccgtggtc 2136118
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 gttcgtcggcggcacgggcc 413 |||||||||||||||||||| Sbjct: 896584 gttcgtcggcggcacgggcc 896565
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 199 cccgtcgccgccgccgcccgccaagcgc 226 |||| |||||||||||| |||||||||| Sbjct: 272703 cccgccgccgccgccgcacgccaagcgc 272676
>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence Length = 634917 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ctgccccatccagccggtcc 200 |||||||||||||||||||| Sbjct: 220399 ctgccccatccagccggtcc 220380
>gb|AC158747.3| Mus musculus chromosome 15, clone RP24-248P22, complete sequence Length = 156293 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 tggagaagctgggggaaggg 274 |||||||||||||||||||| Sbjct: 153084 tggagaagctgggggaaggg 153103
>emb|AL023806.1|HS466P17 Human DNA sequence from clone RP3-466P17 on chromosome 6q24 Contains the 5' end of the EPM2A gene for progressive myoclonus type 2 epilepsy (Lafora disease) protein (laforin) and a CpG island, complete sequence Length = 149963 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 cgccgccgccgcccgccaagcgct 227 |||||||||||||||||| ||||| Sbjct: 59652 cgccgccgccgcccgccatgcgct 59675
>emb|AL935256.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 5/11 Length = 302050 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcttcgttattcagttcagc 69 |||||||||||||||||||| Sbjct: 233424 gcttcgttattcagttcagc 233405
>gb|AC161165.5| Mus musculus chromosome 15, clone RP23-278C10, complete sequence Length = 176135 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gccgccgccgcccgccaagc 224 |||||||||||||||||||| Sbjct: 127334 gccgccgccgcccgccaagc 127353
>emb|AL645727.16| Mouse DNA sequence from clone RP23-20G7 on chromosome 1 Contains a cytochrome c oxidase subunit Vb (Cox5b) pseudogene, a ribosomal protein S2 (Rps2) pseudogene, the 5' end of the Nrp2 gene for neuropilin 2, the 3' end of the gene for an ortholog of human amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 19 (ALS2CR19) and two CpG islands, complete sequence Length = 218427 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ggagaagctgggggaagggc 275 |||||||||||||||||||| Sbjct: 169392 ggagaagctgggggaagggc 169411
>gb|AC109475.3| Homo sapiens chromosome 5 clone RP11-416F23, complete sequence Length = 192464 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 accagttgggtggtgtgctgctgt 97 ||||||||||||| |||||||||| Sbjct: 74705 accagttgggtggggtgctgctgt 74682
>gb|AC093506.2| Homo sapiens chromosome 5 clone CTD-2021M10, complete sequence Length = 132899 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 accagttgggtggtgtgctgctgt 97 ||||||||||||| |||||||||| Sbjct: 90885 accagttgggtggggtgctgctgt 90908
>gb|AE005730.1| Caulobacter crescentus CB15 section 56 of 359 of the complete genome Length = 14506 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 cgccgccgccgcccgccaag 223 |||||||||||||||||||| Sbjct: 1957 cgccgccgccgcccgccaag 1938
>gb|U12290.2|FSU12290 Sphingobium chlorophenolicum PcpB (pcpB), PcpD (pcpD), PCP degradation regulatory protein (pcpR), probable succinoglycan biosynthesis protein, and probable outer membrane salicin receptor genes, complete cds; and probable TonB-dependent receptor gene, partial cds Length = 8480 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ggggaagggcggctaagcgc 285 |||||||||||||||||||| Sbjct: 5095 ggggaagggcggctaagcgc 5076
>dbj|AK093533.1| Homo sapiens cDNA FLJ36214 fis, clone THYMU2000672, highly similar to UBIQUITIN-CONJUGATING ENZYME E2-25 KDA (EC 6.3.2.19) Length = 2272 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 133 ggcggcggtggccgtggtcgtttcggtggcgg 164 |||||||||||| |||||||| ||||||||| Sbjct: 128 ggcggcggtggcggtggtcgtagcggtggcgg 159
>emb|CR606205.1| full-length cDNA clone CS0DI068YA21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2212 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 133 ggcggcggtggccgtggtcgtttcggtggcgg 164 |||||||||||| |||||||| ||||||||| Sbjct: 115 ggcggcggtggcggtggtcgtagcggtggcgg 146
>gb|AC108471.3| Homo sapiens BAC clone RP11-539G18 from 4, complete sequence Length = 141442 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 133 ggcggcggtggccgtggtcgtttcggtggcgg 164 |||||||||||| |||||||| ||||||||| Sbjct: 87037 ggcggcggtggcggtggtcgtagcggtggcgg 87068
>gb|AC011492.8| Homo sapiens chromosome 19 clone CTB-187L3, complete sequence Length = 153064 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 cgcggcggcgggcggggcgc 326 |||||||||||||||||||| Sbjct: 64671 cgcggcggcgggcggggcgc 64690
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgcggcggcgggcggggcgc 326 |||||||||||||||||||| Sbjct: 119368 cgcggcggcgggcggggcgc 119349
>ref|NM_006755.1| Homo sapiens transaldolase 1 (TALDO1), mRNA Length = 1319 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gtcccgtcgccgccgccgcc 216 |||||||||||||||||||| Sbjct: 8 gtcccgtcgccgccgccgcc 27
>dbj|AK143891.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F520004N21 product:hypothetical Lipocalin-1 receptor/LMBR1-like conserved region containing protein, full insert sequence Length = 2129 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gccgccgccgcccgccaagc 224 |||||||||||||||||||| Sbjct: 75 gccgccgccgcccgccaagc 56
>dbj|AK154968.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630113E17 product:Lipocalin-1 interacting membrane receptor (Lipocalin-interacting protein) homolog [Homo sapiens], full insert sequence Length = 2293 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gccgccgccgcccgccaagc 224 |||||||||||||||||||| Sbjct: 248 gccgccgccgcccgccaagc 229
>gb|AF058912.1|AF058912 Homo sapiens transaldolase (TALDO1) gene, promoter region Length = 951 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gtcccgtcgccgccgccgcc 216 |||||||||||||||||||| Sbjct: 909 gtcccgtcgccgccgccgcc 928
>ref|XM_939725.1| PREDICTED: Homo sapiens similar to adaptor-related protein complex 1 sigma 2 subunit (LOC654127), mRNA Length = 1372 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gccgccgccgcccgccaagc 224 |||||||||||||||||||| Sbjct: 74 gccgccgccgcccgccaagc 93
>gb|AY927786.1| Canis familiaris cyclooxygenase 2 (COX-2) gene, promoter region and 5' UTR Length = 1768 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgcggcggcgggcggggcgc 326 |||||||||||||||||||| Sbjct: 1768 cgcggcggcgggcggggcgc 1749
>dbj|AK170328.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630047O13 product:1110013E13Rik protein (RIKEN cDNA 1110013E13 gene) (Lipocalin-1 interacting membrane receptor) homolog [Mus musculus], full insert sequence Length = 1590 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gccgccgccgcccgccaagc 224 |||||||||||||||||||| Sbjct: 75 gccgccgccgcccgccaagc 56
>dbj|AK003656.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110013E13 product:LIPOCALIN-1 INTERACTING MEMBRANE RECEPTOR (LIPOCALIN-INTERACTING PROTEIN) homolog [Homo sapiens], full insert sequence Length = 2100 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gccgccgccgcccgccaagc 224 |||||||||||||||||||| Sbjct: 46 gccgccgccgcccgccaagc 27
>ref|NM_001018041.1| Homo sapiens epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) (EPM2A), transcript variant 2, mRNA Length = 1711 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 cgccgccgccgcccgccaagcgct 227 |||||||||||||||||| ||||| Sbjct: 341 cgccgccgccgcccgccatgcgct 364
>ref|NM_005670.3| Homo sapiens epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) (EPM2A), transcript variant 1, mRNA Length = 3474 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 cgccgccgccgcccgccaagcgct 227 |||||||||||||||||| ||||| Sbjct: 341 cgccgccgccgcccgccatgcgct 364
>emb|BX005294.6| Zebrafish DNA sequence from clone CH211-189K21 in linkage group 14, complete sequence Length = 151151 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 agttgggtggtgtgctgctgtctc 100 ||||||||||||| |||||||||| Sbjct: 118697 agttgggtggtgttctgctgtctc 118720
>dbj|AK051665.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130063D22 product:non-catalytic region of tyrosine kinase adaptor protein 2, full insert sequence Length = 2772 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 79 ccgtcgccgccgccgcccgc 60
>dbj|AK049110.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330002D02 product:LIPOCALIN-1 INTERACTING MEMBRANE RECEPTOR (LIPOCALIN-INTERACTING PROTEIN) homolog [Homo sapiens], full insert sequence Length = 2169 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gccgccgccgcccgccaagc 224 |||||||||||||||||||| Sbjct: 115 gccgccgccgcccgccaagc 96
>dbj|AK030589.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330435I08 product:LIPOCALIN-1 INTERACTING MEMBRANE RECEPTOR (LIPOCALIN-INTERACTING PROTEIN) homolog [Homo sapiens], full insert sequence Length = 2116 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gccgccgccgcccgccaagc 224 |||||||||||||||||||| Sbjct: 80 gccgccgccgcccgccaagc 61
>dbj|AK014949.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4921523A11 product:non-catalytic region of tyrosine kinase adaptor protein 2, full insert sequence Length = 2767 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 73 ccgtcgccgccgccgcccgc 54
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 19102697 ccgtcgccgccgccgcccgc 19102678
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gacgcggcggcgggcggggc 324 |||||||||||||||||||| Sbjct: 6854700 gacgcggcggcgggcggggc 6854681 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gtggacgcggcggcgggcggggcg 325 |||| ||||||||||||||||||| Sbjct: 2442813 gtggtcgcggcggcgggcggggcg 2442836
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgcggcggcgggcggggcgc 326 |||||||||||||||||||| Sbjct: 27809537 cgcggcggcgggcggggcgc 27809518 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgcggcggcgggcggggcgc 326 |||||||||||||||||||| Sbjct: 11565559 cgcggcggcgggcggggcgc 11565540
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cgtcgccgccgccgcccgcc 220 |||||||||||||||||||| Sbjct: 33194698 cgtcgccgccgccgcccgcc 33194717 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gtcccgtcgccgccgccgcc 216 |||||||||||||||||||| Sbjct: 24257960 gtcccgtcgccgccgccgcc 24257941
>gb|AC140168.2| Homo sapiens chromosome 5 clone RP11-774D14, complete sequence Length = 191108 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 accagttgggtggtgtgctgctgt 97 ||||||||||||| |||||||||| Sbjct: 33301 accagttgggtggggtgctgctgt 33324
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cgtcgccgccgccgcccgcc 220 |||||||||||||||||||| Sbjct: 131608 cgtcgccgccgccgcccgcc 131627
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 301 cgtggacgcggcggcgggcggggcgctg 328 ||||| ||||||||||| |||||||||| Sbjct: 3903601 cgtgggcgcggcggcggacggggcgctg 3903628
>gb|AF284580.1|AF284580 Homo sapiens progressive myoclonus epilepsy type 2 (EPM2A) mRNA, complete cds Length = 3487 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 cgccgccgccgcccgccaagcgct 227 |||||||||||||||||| ||||| Sbjct: 341 cgccgccgccgcccgccatgcgct 364
>gb|AC138836.2| Homo sapiens chromosome 5 clone RP11-1221E9, complete sequence Length = 182834 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 accagttgggtggtgtgctgctgt 97 ||||||||||||| |||||||||| Sbjct: 87926 accagttgggtggggtgctgctgt 87949
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 cgcggcggcgggcggggcgc 326 |||||||||||||||||||| Sbjct: 95680 cgcggcggcgggcggggcgc 95699
>gb|AC138853.2| Homo sapiens chromosome 5 clone RP11-1325J9, complete sequence Length = 174039 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 accagttgggtggtgtgctgctgt 97 ||||||||||||| |||||||||| Sbjct: 18811 accagttgggtggggtgctgctgt 18788
>gb|AC138917.2| Homo sapiens chromosome 5 clone RP11-630I7, complete sequence Length = 154824 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 accagttgggtggtgtgctgctgt 97 ||||||||||||| |||||||||| Sbjct: 78204 accagttgggtggggtgctgctgt 78227
>gb|AC117539.6| Papio hamadryas, clone RP41-208E11, complete sequence Length = 208592 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 156631 ccgtcgccgccgccgcccgc 156650
>gb|AC131934.13| Homo sapiens chromosome 11, clone RP11-754B17, complete sequence Length = 154813 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gtcccgtcgccgccgccgcc 216 |||||||||||||||||||| Sbjct: 3539 gtcccgtcgccgccgccgcc 3520
>gb|AC132204.5| Homo sapiens chromosome 11, clone RP13-506F1, complete sequence Length = 23417 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gtcccgtcgccgccgccgcc 216 |||||||||||||||||||| Sbjct: 1405 gtcccgtcgccgccgccgcc 1424
>gb|AF249327.1|AF249327 Rattus norvegicus TGF-beta 1 gene, promoter sequence Length = 4595 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ccagccggtcccgtcgccgccgcc 213 ||||||||||||| |||||||||| Sbjct: 3902 ccagccggtcccgccgccgccgcc 3925
>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046B10 Length = 142596 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gtcccgtcgccgccgccgcc 216 |||||||||||||||||||| Sbjct: 82524 gtcccgtcgccgccgccgcc 82505
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gtcccgtcgccgccgccgcc 216 |||||||||||||||||||| Sbjct: 3864 gtcccgtcgccgccgccgcc 3845
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 tcccgtcgccgccgccgccc 217 |||||||||||||||||||| Sbjct: 60474 tcccgtcgccgccgccgccc 60455
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455F03 Length = 158201 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 75203 ccgtcgccgccgccgcccgc 75222
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 14910 ccgtcgccgccgccgcccgc 14929
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 125529 ccgtcgccgccgccgcccgc 125548
>dbj|AK120638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K17, full insert sequence Length = 3505 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgcggcggcgggcggggcgc 326 |||||||||||||||||||| Sbjct: 875 cgcggcggcgggcggggcgc 856
>dbj|AK111742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050K14, full insert sequence Length = 1623 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 1359 ccgtcgccgccgccgcccgc 1340
>dbj|AP006621.1| Homo sapiens genomic DNA, chromosome 11, clone:CMB9-55F22, complete sequence Length = 129989 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gtcccgtcgccgccgccgcc 216 |||||||||||||||||||| Sbjct: 42334 gtcccgtcgccgccgccgcc 42353
>gb|AF058913.1|AF058913 Homo sapiens transaldolase (TALDO1) gene, complete cds Length = 17479 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gtcccgtcgccgccgccgcc 216 |||||||||||||||||||| Sbjct: 8 gtcccgtcgccgccgccgcc 27
>gb|AF239170.1|AF239170 Rattus norvegicus TGF-beta 1 gene, promoter sequence Length = 1608 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ccagccggtcccgtcgccgccgcc 213 ||||||||||||| |||||||||| Sbjct: 1541 ccagccggtcccgccgccgccgcc 1564
>dbj|AK106255.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-E10, full insert sequence Length = 1343 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 cgcggcggcgggcggggcgc 326 |||||||||||||||||||| Sbjct: 218 cgcggcggcgggcggggcgc 199
>dbj|AK099030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126M11, full insert sequence Length = 1756 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 gtggacgcggcggcgggcggggcg 325 |||| ||||||||||||||||||| Sbjct: 59 gtggtcgcggcggcgggcggggcg 36
>dbj|AK072841.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143G06, full insert sequence Length = 1728 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 gtggacgcggcggcgggcggggcg 325 |||| ||||||||||||||||||| Sbjct: 63 gtggtcgcggcggcgggcggggcg 40
>dbj|AK072280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C18, full insert sequence Length = 1337 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 cgtcgccgccgccgcccgcc 220 |||||||||||||||||||| Sbjct: 296 cgtcgccgccgccgcccgcc 277
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 309 cggcggcgggcggggcgctgtacacggc 336 ||||||||| || ||||||||||||||| Sbjct: 3332862 cggcggcggacgaggcgctgtacacggc 3332835
>gb|BC050600.1| Homo sapiens huntingtin interacting protein 2, mRNA (cDNA clone MGC:60046 IMAGE:6502901), complete cds Length = 957 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 133 ggcggcggtggccgtggtcgtttcggtggcgg 164 |||||||||||| |||||||| ||||||||| Sbjct: 73 ggcggcggtggcggtggtcgtagcggtggcgg 104
>gb|BC006419.1| Homo sapiens cDNA clone IMAGE:3946309, complete cds Length = 1343 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 133 ggcggcggtggccgtggtcgtttcggtggcgg 164 |||||||||||| |||||||| ||||||||| Sbjct: 192 ggcggcggtggcggtggtcgtagcggtggcgg 161
>gb|L19437.2|HUMTRNSAL Homo sapiens transaldolase mRNA, complete cds Length = 1319 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gtcccgtcgccgccgccgcc 216 |||||||||||||||||||| Sbjct: 8 gtcccgtcgccgccgccgcc 27
>gb|AF105069.1|AF105069 Rattus norvegicus transforming growth factor beta-1 gene, partial cds Length = 1300 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ccagccggtcccgtcgccgccgcc 213 ||||||||||||| |||||||||| Sbjct: 351 ccagccggtcccgccgccgccgcc 374
>gb|AC121114.10| Mus musculus chromosome 15, clone RP23-63M19, complete sequence Length = 337658 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 accagttgggtggtgtgctg 93 |||||||||||||||||||| Sbjct: 256397 accagttgggtggtgtgctg 256378
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggcggcggtggccgtggtcg 152 |||||||||||||||||||| Sbjct: 5674429 ggcggcggtggccgtggtcg 5674448
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 tcgccgccgccgcccgccaagcgc 226 |||| ||||||||||||||||||| Sbjct: 226790 tcgctgccgccgcccgccaagcgc 226767
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 396 tcgtcggcggcacgggcctgctcggcatcgcg 427 ||||||||||||||||| ||||||| ||||| Sbjct: 1514642 tcgtcggcggcacgggcgggctcggcttcgcg 1514673
>gb|AF010398.1|HSTALDR1 Homo sapiens transaldolase-related protein gene, exon 1 Length = 1463 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gtcccgtcgccgccgccgcc 216 |||||||||||||||||||| Sbjct: 1071 gtcccgtcgccgccgccgcc 1090
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 19028924 ccgtcgccgccgccgcccgc 19028905
>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127026 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ccgtcgccgccgccgcccgc 219 |||||||||||||||||||| Sbjct: 123282 ccgtcgccgccgccgcccgc 123301
>gb|AC002985.1|AC002985 Human DNA from chromosome 19-specific cosmid R27090, genomic sequence, complete sequence Length = 38041 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 193 gccggtcccgtcgccgccgccgcccgcc 220 |||||||||| ||| ||||||||||||| Sbjct: 34481 gccggtcccgacgcggccgccgcccgcc 34508
>gb|AF015683.1|AF015683 Rattus norvegicus transforming growth factor beta 1 gene, promoter and partial exon 1 Length = 628 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ccagccggtcccgtcgccgccgcc 213 ||||||||||||| |||||||||| Sbjct: 353 ccagccggtcccgccgccgccgcc 376
>dbj|AB022436.1| Homo sapiens LIG mRNA for E2 ubiquitin-conjugating enzyme alternative splicing form, complete cds Length = 820 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 133 ggcggcggtggccgtggtcgtttcggtggcgg 164 |||||||||||| |||||||| ||||||||| Sbjct: 21 ggcggcggtggcggtggtcgtagcggtggcgg 52
>dbj|AB022435.1| Homo sapiens LIG mRNA for E2 ubiquitin-conjugating enzyme, complete cds Length = 973 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 133 ggcggcggtggccgtggtcgtttcggtggcgg 164 |||||||||||| |||||||| ||||||||| Sbjct: 21 ggcggcggtggcggtggtcgtagcggtggcgg 52 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,254,932 Number of Sequences: 3902068 Number of extensions: 4254932 Number of successful extensions: 154693 Number of sequences better than 10.0: 178 Number of HSP's better than 10.0 without gapping: 187 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 147463 Number of HSP's gapped (non-prelim): 7230 length of query: 458 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 436 effective length of database: 17,147,199,772 effective search space: 7476179100592 effective search space used: 7476179100592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
