>EXTN3_ARATH (Q9FS16) Extensin-3 precursor (AtExt3) (AtExt5)|
          Length = 427

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 25/91 (27%), Positives = 34/91 (37%)
 Frame = -1

Query: 326 YSPRNPKTLISHKVPAESYKQHPPIPGRHRLWLRLGRYLIVFEPPTFVLD**KHPWQMLS 147
           +SP  PK    +K P    K + P P  H        Y+    PP         P +  S
Sbjct: 331 HSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPP---------PVKHYS 381

Query: 146 QLFVFHKSKNFTSDYEIRMPPTVPINHYSDP 54
              V+H        Y  + PP  P++HYS P
Sbjct: 382 PPPVYHSPPPPKEKYVYKSPPPPPVHHYSPP 412

>ORK1_DROME (Q94526) Open rectifier potassium channel protein 1 (Two pore|
           domain potassium channel Ork1)
          Length = 1001

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 272 RTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPP 373
           R PP P+E + SL SGG  +  +  +  DG  PP
Sbjct: 599 RGPPPPFESNGSLASGGGGLTNMGFQMEDGATPP 632

>APE1_AERPE (O73942) Homing endonuclease I-ApeI (EC 3.1.-.-) (rRNA|
           intron-encoded homing endonuclease 1)
          Length = 222

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 296 KSKSLGS--GGSMVARLKLKGIDGRAPPGVEPAA 391
           KSK L    G  +    KLKGI G AP GVEPAA
Sbjct: 189 KSKKLNELLGRPLPGPSKLKGIGGGAPQGVEPAA 222

>AKT6_ARATH (Q8GXE6) Potassium channel AKT6 (Shaker pollen inward rectifier|
           K(+) channel) (Potassium channel SPIK)
          Length = 888

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/55 (36%), Positives = 27/55 (49%)
 Frame = +2

Query: 167 VFINQERKLGARRRSDTVLVSTINDADQGSADVAYRTPPAPYEKSKSLGSGGSMV 331
           V ++Q+RKL   R S   ++S  N AD G      R+P  P       G GGSM+
Sbjct: 773 VVVSQKRKLNNFRNSLFGIISAANSADDGGE--VPRSPAVP-------GGGGSMI 818

>NEU1_CATCO (P15210) Isoticin-neurophysin IT 1 precursor [Contains: Isotocin|
           (IT); Neurophysin IT 1]
          Length = 154

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 151 SICQGCFH*SRTKVGGSKTIRYRPSLNHKRCRPGIGGCC 267
           S+C  C+  S   +GG + I+  PS     C PG  G C
Sbjct: 16  SVCSACYI-SNCPIGGKRAIQDSPSRQCMSCGPGDRGRC 53

>RGYR_SULSH (P74759) Reverse gyrase [Includes: Helicase (EC 3.6.1.-);|
           Topoisomerase (EC 5.99.1.3)]
          Length = 1166

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 96  YFIVRGEILGFMKDEQLRKHLPRMFSLIKNE 188
           + I++GE + + K EQLR+ L    SL+K++
Sbjct: 439 FSIIKGETINYQKLEQLRQELLYYISLVKDK 469

>BIN1_HUMAN (O00499) Myc box-dependent-interacting protein 1 (Bridging|
           integrator 1) (Amphiphysin-like protein) (Amphiphysin
           II) (Box-dependent myc-interacting protein 1)
          Length = 593

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 390 AAGSTPGGALPSIPLSFSLATILPPEPK 307
           A G+TPG  LP  P        +PP PK
Sbjct: 319 AGGATPGATLPKSPSQLRKGPPVPPPPK 346

>NEU2_CATCO (P15211) Isoticin-neurophysin IT 2 precursor [Contains: Isotocin|
           (IT); Neurophysin IT 2]
          Length = 148

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 151 SICQGCFH*SRTKVGGSKTIRYRPSLNHKRCRPGIGGCC 267
           S+C  C+  S   +GG + ++  PS     C PG  G C
Sbjct: 16  SVCSACYI-SNCPIGGKRAVQDLPSRQCMSCGPGDRGRC 53

>KLF4_HUMAN (O43474) Krueppel-like factor 4 (Epithelial zinc-finger protein|
           EZF) (Gut-enriched krueppel-like factor)
          Length = 470

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 32/103 (31%), Positives = 39/103 (37%), Gaps = 12/103 (11%)
 Frame = -1

Query: 329 PYSPRNPKTLISHKVPAESYKQH----PPIPGRHRLWLR---LGRYLIVFEPPTFVLD** 171
           PY+   P+T    K  A S   H    PP+   HR       LGR L     PT  L+  
Sbjct: 256 PYNGGPPRTCPKIKQEAVSSCTHLGAGPPLSNGHRPAAHDFPLGRQLPSRTTPTLGLEEV 315

Query: 170 K-----HPWQMLSQLFVFHKSKNFTSDYEIRMPPTVPINHYSD 57
                 HP   L   F  H   N+ S    +M P VP  HY +
Sbjct: 316 LSSRDCHPALPLPPGFHPHPGPNYPSFLPDQMQPQVPPLHYQE 358

>WSB1_HUMAN (Q9Y6I7) WD repeat and SOCS box-containing protein 1 (WSB-1) (SOCS|
           box-containing WD protein SWiP-1)
          Length = 421

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 164 PWQMLSQLFVFHKSKNFTSDYEIRMP 87
           PW    Q F+ H +KN T+   +R+P
Sbjct: 62  PWSQCLQNFLLHGTKNVTNSSSLRLP 87

>XPO1_RAT (Q80U96) Exportin-1 (Exp1) (Chromosome region maintenance 1 protein|
           homolog)
          Length = 1071

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +3

Query: 90  HSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESW 194
           H+++   G ++G   D+ +++HL   + L+ N+ W
Sbjct: 631 HTFYEAVGYMIGAQTDQTVQEHLIEKYMLLPNQVW 665

>XPO1_MOUSE (Q6P5F9) Exportin-1 (Exp1) (Chromosome region maintenance 1 protein|
           homolog)
          Length = 1071

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +3

Query: 90  HSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESW 194
           H+++   G ++G   D+ +++HL   + L+ N+ W
Sbjct: 631 HTFYEAVGYMIGAQTDQTVQEHLIEKYMLLPNQVW 665

>XPO1_HUMAN (O14980) Exportin-1 (Exp1) (Chromosome region maintenance 1 protein|
           homolog)
          Length = 1071

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +3

Query: 90  HSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESW 194
           H+++   G ++G   D+ +++HL   + L+ N+ W
Sbjct: 631 HTFYEAVGYMIGAQTDQTVQEHLIEKYMLLPNQVW 665

>CT077_MOUSE (Q9CSU0) Protein C20orf77 homolog|
          Length = 326

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
 Frame = +2

Query: 134 RRTTAKAFAKDVFINQERKLGA-RRRSDTVLVSTIN----DADQGSADVAYRTPPAPYEK 298
           R+ T    A DV  N +RK     R  ++VLV   +    +AD+G      R      E+
Sbjct: 55  RKLTFLYLANDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQER 114

Query: 299 SKSLGSGGSMVARLKLKGIDGRAPP 373
           S     GG  + +LKL   D ++PP
Sbjct: 115 SVY---GGEFIQQLKLSMEDSKSPP 136

>CT077_HUMAN (Q9NQG5) Protein C20orf77|
          Length = 326

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
 Frame = +2

Query: 134 RRTTAKAFAKDVFINQERKLGA-RRRSDTVLVSTIN----DADQGSADVAYRTPPAPYEK 298
           R+ T    A DV  N +RK     R  ++VLV   +    +AD+G      R      E+
Sbjct: 55  RKLTFLYLANDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQER 114

Query: 299 SKSLGSGGSMVARLKLKGIDGRAPP 373
           S     GG  + +LKL   D ++PP
Sbjct: 115 SVY---GGEFIQQLKLSMEDSKSPP 136

>GTR3_BOVIN (P58352) Solute carrier family 2, facilitated glucose transporter|
           member 3 (Glucose transporter type 3, brain)
          Length = 494

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
 Frame = +3

Query: 33  GPIVLAFGIGVMINRDSRGHSYFIVR------GEILGFMK 134
           G ++ +F +G+ +NR  RG+S  IV       G ++GF K
Sbjct: 73  GGMIGSFSVGLFVNRFGRGNSMLIVNLLAIAGGCLMGFCK 112

>IE63_HHV1E (P36295) Transcriptional regulator IE63 (VMW63) (ICP27)|
          Length = 511

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -1

Query: 338 ALRPYSPRNPKTLISHKVPAESYKQHP--PIPGRHRLWLRLG 219
           A+RP  P +P  + S + P  + +Q P  P P  H +W RLG
Sbjct: 69  AVRPSRPEDPG-VPSTQTPRPTERQGPNDPQPAPHSVWSRLG 109

>IE63_HHV11 (P10238) Transcriptional regulator IE63 (VMW63) (ICP27)|
          Length = 512

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -1

Query: 338 ALRPYSPRNPKTLISHKVPAESYKQHP--PIPGRHRLWLRLG 219
           A+RP  P +P  + S + P  + +Q P  P P  H +W RLG
Sbjct: 69  AVRPSRPEDPG-VPSTQTPRPTERQGPNDPQPAPHSVWSRLG 109

>RGYR2_SULSO (Q97ZF5) Reverse gyrase 2 [Includes: Helicase (EC 3.6.1.-);|
           Topoisomerase (EC 5.99.1.3)]
          Length = 1166

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 96  YFIVRGEILGFMKDEQLRKHLPRMFSLIKNE 188
           + I++GE + + K EQLR+ L    SL+K++
Sbjct: 439 FSIIKGESINYHKLEQLRQELLYYMSLVKDK 469

>SCMH1_MOUSE (Q8K214) Polycomb protein SCMH1 (Sex comb on midleg homolog 1)|
          Length = 706

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +2

Query: 221 LVSTINDADQGSADVAYRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPA 388
           L+ T+N A+     + ++ PP+P      +G        +KL+ +D + P  + PA
Sbjct: 140 LLKTLNGAEMAPIKIFHKEPPSPSHNFFKMG--------MKLEAVDRKNPHFICPA 187

>NS1_INBLE (P03502) Nonstructural protein 1 (NS1) (NS1B)|
          Length = 281

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -1

Query: 344 VSALRPYSPRNPKTLISHKVPAESYKQHPPIPGRH 240
           +    PY  +NP T    K P   +  +PP PG++
Sbjct: 97  IEGFEPYCVKNPST---SKCPNYDWTDYPPTPGKY 128

>NEUI_FUGRU (O42493) Isoticin-neurophysin IT 1 precursor [Contains: Isotocin|
           (IT); Neurophysin IT 1]
          Length = 155

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 151 SICQGCFH*SRTKVGGSKTIRYRPSLNHKRCRPGIGGCC 267
           S+C  C+  S   +GG ++I   P      C PG  G C
Sbjct: 15  SVCSACYI-SNCPIGGKRSIMDAPQRKCMSCGPGDRGRC 52

>NEU2_ONCKE (Q91167) Isoticin-neurophysin IT 2 precursor [Contains: Isotocin|
           (IT); Neurophysin IT 2]
          Length = 156

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 151 SICQGCFH*SRTKVGGSKTIRYRPSLNHKRCRPGIGGCC 267
           S+C  C+  S   +GG ++I   P      C PG  G C
Sbjct: 15  SVCSACYI-SNCPIGGKRSIMDAPQRKCMSCGPGEQGRC 52

>ERF_HUMAN (P50548) ETS domain-containing transcription factor ERF (Ets2|
           repressor factor)
          Length = 548

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +2

Query: 209 SDTVLVSTINDADQGSADV--AYRTPPAPYEKSKSLGSGGSMVARLKLK 349
           S+ V V+ I+D D+   +V    R PPAP +       G S    LKL+
Sbjct: 435 SEEVEVTDISDEDEEDGEVFKTPRAPPAPPKPEPGEAPGASQCMPLKLR 483

>WBS14_CAEEL (P41846) WBSCR14 protein homolog (Mlx interactor)|
          Length = 1009

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 115 SPLTMKYECPRLSLLIITPIPKANTIGPES 26
           SPLT   + P   L + TP+P AN  GP++
Sbjct: 541 SPLTASVQSP---LSVATPLPLANQTGPQT 567

>SLBP2_XENLA (Q9YGP6) Oocyte-specific histone RNA stem-loop-binding protein 2|
          Length = 250

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = -2

Query: 388 RRLHAWWCPSVNSFKFQPCDHTPPGTQRL 302
           R LHAW  PS NSF+    DH+   TQRL
Sbjct: 165 RDLHAWDPPSQNSFQE---DHSFKQTQRL 190


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,213,717
Number of Sequences: 219361
Number of extensions: 1358496
Number of successful extensions: 3238
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3235
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)