>AIR12_ARATH (Q94BT2) Auxin-induced in root cultures protein 12 precursor|
          Length = 252

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +3

Query: 219 YAKCEDLPQLGAALHWTYDESKSSLSLAFVAAPAGAN-GWVAWALN 353
           +  CEDLP L + LH+TY+ S SSLS+AFVA P+ AN GWVAWA+N
Sbjct: 40  FDSCEDLPVLNSYLHYTYNSSNSSLSVAFVATPSQANGGWVAWAIN 85

>UBE2S_HUMAN (Q16763) Ubiquitin-conjugating enzyme E2S (EC 6.3.2.19)|
           (Ubiquitin-conjugating enzyme E2-24 kDa)
           (Ubiquitin-protein ligase) (Ubiquitin carrier protein)
           (E2-EPF5)
          Length = 222

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 8/41 (19%)
 Frame = -1

Query: 385 RLRAGHALARGLSAQATHPLAPAG--------AATNASERD 287
           R  AG ALA G  A +T P AP G        A  +A ERD
Sbjct: 164 RAEAGRALASGTEASSTDPGAPGGPGGAEGPMAKKHAGERD 204

>RCOR1_HUMAN (Q9UKL0) REST corepressor 1 (Protein CoREST)|
          Length = 482

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -1

Query: 376 AGHALARGLSAQATHPLA-PAGAATNASERDDLDSS*VQCSAAPSCGRSSHLAYVFPAGN 200
           A  A A   SA A+   A PA  A + +      ++    +AAP+ G++  LA   P GN
Sbjct: 19  AASASAAAASAAASAACASPAATAASGAAASSASAAAASAAAAPNNGQNKSLAAAAPNGN 78

Query: 199 FS 194
            S
Sbjct: 79  SS 80

>ILVD3_NOCFA (Q5YRV8) Dihydroxy-acid dehydratase 3 (EC 4.2.1.9) (DAD 3)|
          Length = 613

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = -1

Query: 382 LRAGHALARGLSAQATHPLAPAGAATNASERDDLDSS*VQCSAAPSCGRSS 230
           + AG A+  G  AQA   L  A +A+  S   D   S V+ SA P+CG  S
Sbjct: 148 MEAGKAVVVGGVAQAPTDLITAISASANSSVTDEGLSEVERSACPTCGSCS 198

>Y4WB_RHISN (P55680) Hypothetical zinc protease-like protein y4wB|
          Length = 447

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 204 PAGKTYAKCED-LPQLGAALHWTYDESKSSLSLAFVAAP 317
           PAG +     D +P+LG A+   YD  ++ LSLA+   P
Sbjct: 242 PAGPSLTPVVDAVPKLGRAIRVAYDLPQAQLSLAYPGIP 280

>RLA2_TRYBB (P51408) 60S acidic ribosomal protein P2|
          Length = 107

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = -1

Query: 373 GHALARGLSAQATHPLAPAGAATNASERDDLD 278
           G A + G +A A    APA AA  A E DD D
Sbjct: 69  GAAPSGGAAAHAAAASAPAAAAAEAEEEDDDD 100


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,317,258
Number of Sequences: 219361
Number of extensions: 336249
Number of successful extensions: 1413
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)