ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast70c04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191906.1| Oryza sativa (japonica cultivar-group), predic... 256 5e-65
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 256 5e-65
3dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic D... 256 5e-65
4dbj|AK065097.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 5e-65
5ref|XM_481090.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
6ref|XM_469736.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
7gb|AC150413.2| Branchiostoma floridae clone CH302-61A17, complet... 42 1.5
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.5
9ref|XM_744391.1| Aspergillus fumigatus Af293 calcium/calmodulin-... 42 1.5
10gb|AY100452.1| Mus musculus lmb145-cap1-243 protein precursor, m... 42 1.5
11gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic... 42 1.5
12dbj|AK122627.1| Homo sapiens cDNA FLJ16048 fis, clone FEBRA20083... 42 1.5
13dbj|AK093337.1| Homo sapiens cDNA FLJ36018 fis, clone TESTI20163... 42 1.5
14dbj|AK027301.2| Homo sapiens cDNA FLJ14395 fis, clone HEMBA10032... 42 1.5
15dbj|AK024117.1| Homo sapiens cDNA FLJ14055 fis, clone HEMBB10002... 42 1.5
16dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
17dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
18dbj|AP005095.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
19dbj|AK107749.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
20dbj|AK105040.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
21dbj|AK105037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
22dbj|AK060609.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
23dbj|AK060557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
24dbj|AK058795.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
25ref|XM_475933.1| Oryza sativa (japonica cultivar-group), predic... 40 5.9
26gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
27gb|AC098571.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
28emb|AL139151.13| Human DNA sequence from clone RP4-703F12 on chr... 40 5.9
29emb|BX065953.1|CNS09N1X Single read from an extremity of a full-... 40 5.9
30emb|BX065129.1|CNS09MF1 Single read from an extremity of a full-... 40 5.9
31emb|AL731594.5|OSJN00234 Oryza sativa genomic DNA, chromosome 4,... 40 5.9
32emb|AJ001294.1|CPPIPC Craterostigma plantagineum mRNA for major ... 40 5.9
33gb|AE005879.1| Caulobacter crescentus CB15 section 205 of 359 of... 40 5.9
34gb|AF259792.1| Homo sapiens p250R mRNA, complete cds 40 5.9
35dbj|AK029771.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 5.9
36dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
37dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
38gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 5.9
39gb|AC154436.2| Mus musculus BAC clone RP24-192B24 from chromosom... 40 5.9
40dbj|AK071919.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
41dbj|AK065630.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
42emb|AL606654.3|OSJN00100 Oryza sativa genomic DNA, chromosome 4,... 40 5.9
43emb|CT025528.10| Mouse DNA sequence from clone RP23-205O23 on ch... 40 5.9 
>ref|NM_191906.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1344

 Score =  256 bits (129), Expect = 5e-65
 Identities = 203/228 (89%)
 Strand = Plus / Plus

                                                                       
Query: 211 cgccgcccatcgtcgtcgtgggctccgccaacgcggacatctacgtcgaggtcaaccgtc 270
           |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |
Sbjct: 161 cgccgcccatcgtcgtcgtgggctccgccaacgccgacatctacgtcgaggtcgaccgcc 220

                                                                       
Query: 271 ttccgctcgtcggcgagacggttgccgcgagtgccggtcacagcctcgccggtgggaagg 330
           | ||||||||||| |||||||| || ||| | ||||| | ||||||||| || |||||||
Sbjct: 221 tcccgctcgtcggggagacggtggcggcgcgcgccggccgcagcctcgcgggcgggaagg 280

                                                                       
Query: 331 gcgccaatcaagccgcctgcggggggcggctggcgatgggacccacctacctcgtggcgc 390
           ||||||| || |||||||||||||| || || |||  ||| |||||||||||||||||||
Sbjct: 281 gcgccaaccaggccgcctgcgggggccgcctcgcggcggggcccacctacctcgtggcgc 340

                                                           
Query: 391 gcgtggnggacgacgccaacgggcgcctcctcgagggcgcactcgcgg 438
           |||| | |||||||||||||||||| |||||||||||||| |||||||
Sbjct: 341 gcgtcggggacgacgccaacgggcggctcctcgagggcgccctcgcgg 388



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 73  ctctcgaagcgcgcctccgcctcccactcgccgg 106
           ||||||| || |||||||||||||| ||||||||
Sbjct: 8   ctctcgacgctcgcctccgcctccctctcgccgg 41
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  256 bits (129), Expect = 5e-65
 Identities = 203/228 (89%)
 Strand = Plus / Plus

                                                                            
Query: 211      cgccgcccatcgtcgtcgtgggctccgccaacgcggacatctacgtcgaggtcaaccgtc 270
                |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |
Sbjct: 27179112 cgccgcccatcgtcgtcgtgggctccgccaacgccgacatctacgtcgaggtcgaccgcc 27179171

                                                                            
Query: 271      ttccgctcgtcggcgagacggttgccgcgagtgccggtcacagcctcgccggtgggaagg 330
                | ||||||||||| |||||||| || ||| | ||||| | ||||||||| || |||||||
Sbjct: 27179172 tcccgctcgtcggggagacggtggcggcgcgcgccggccgcagcctcgcgggcgggaagg 27179231

                                                                            
Query: 331      gcgccaatcaagccgcctgcggggggcggctggcgatgggacccacctacctcgtggcgc 390
                ||||||| || |||||||||||||| || || |||  ||| |||||||||||||||||||
Sbjct: 27179232 gcgccaaccaggccgcctgcgggggccgcctcgcggcggggcccacctacctcgtggcgc 27179291

                                                                
Query: 391      gcgtggnggacgacgccaacgggcgcctcctcgagggcgcactcgcgg 438
                |||| | |||||||||||||||||| |||||||||||||| |||||||
Sbjct: 27179292 gcgtcggggacgacgccaacgggcggctcctcgagggcgccctcgcgg 27179339



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 73       ctctcgaagcgcgcctccgcctcccactcgccgg 106
                ||||||| || |||||||||||||| ||||||||
Sbjct: 27178959 ctctcgacgctcgcctccgcctccctctcgccgg 27178992
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>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0003E08
          Length = 135014

 Score =  256 bits (129), Expect = 5e-65
 Identities = 203/228 (89%)
 Strand = Plus / Plus

                                                                         
Query: 211   cgccgcccatcgtcgtcgtgggctccgccaacgcggacatctacgtcgaggtcaaccgtc 270
             |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |
Sbjct: 86790 cgccgcccatcgtcgtcgtgggctccgccaacgccgacatctacgtcgaggtcgaccgcc 86849

                                                                         
Query: 271   ttccgctcgtcggcgagacggttgccgcgagtgccggtcacagcctcgccggtgggaagg 330
             | ||||||||||| |||||||| || ||| | ||||| | ||||||||| || |||||||
Sbjct: 86850 tcccgctcgtcggggagacggtggcggcgcgcgccggccgcagcctcgcgggcgggaagg 86909

                                                                         
Query: 331   gcgccaatcaagccgcctgcggggggcggctggcgatgggacccacctacctcgtggcgc 390
             ||||||| || |||||||||||||| || || |||  ||| |||||||||||||||||||
Sbjct: 86910 gcgccaaccaggccgcctgcgggggccgcctcgcggcggggcccacctacctcgtggcgc 86969

                                                             
Query: 391   gcgtggnggacgacgccaacgggcgcctcctcgagggcgcactcgcgg 438
             |||| | |||||||||||||||||| |||||||||||||| |||||||
Sbjct: 86970 gcgtcggggacgacgccaacgggcggctcctcgagggcgccctcgcgg 87017



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 73    ctctcgaagcgcgcctccgcctcccactcgccgg 106
             ||||||| || |||||||||||||| ||||||||
Sbjct: 86637 ctctcgacgctcgcctccgcctccctctcgccgg 86670
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>dbj|AK065097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M16, full
           insert sequence
          Length = 1483

 Score =  256 bits (129), Expect = 5e-65
 Identities = 203/228 (89%)
 Strand = Plus / Plus

                                                                       
Query: 211 cgccgcccatcgtcgtcgtgggctccgccaacgcggacatctacgtcgaggtcaaccgtc 270
           |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |
Sbjct: 220 cgccgcccatcgtcgtcgtgggctccgccaacgccgacatctacgtcgaggtcgaccgcc 279

                                                                       
Query: 271 ttccgctcgtcggcgagacggttgccgcgagtgccggtcacagcctcgccggtgggaagg 330
           | ||||||||||| |||||||| || ||| | ||||| | ||||||||| || |||||||
Sbjct: 280 tcccgctcgtcggggagacggtggcggcgcgcgccggccgcagcctcgcgggcgggaagg 339

                                                                       
Query: 331 gcgccaatcaagccgcctgcggggggcggctggcgatgggacccacctacctcgtggcgc 390
           ||||||| || |||||||||||||| || || |||  ||| |||||||||||||||||||
Sbjct: 340 gcgccaaccaggccgcctgcgggggccgcctcgcggcggggcccacctacctcgtggcgc 399

                                                           
Query: 391 gcgtggnggacgacgccaacgggcgcctcctcgagggcgcactcgcgg 438
           |||| | |||||||||||||||||| |||||||||||||| |||||||
Sbjct: 400 gcgtcggggacgacgccaacgggcggctcctcgagggcgccctcgcgg 447



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 73  ctctcgaagcgcgcctccgcctcccactcgccgg 106
           ||||||| || |||||||||||||| ||||||||
Sbjct: 67  ctctcgacgctcgcctccgcctccctctcgccgg 100
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>ref|XM_481090.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 579

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 197 cgccgccaatgcgccgccgcc 217
           |||||||||||||||||||||
Sbjct: 396 cgccgccaatgcgccgccgcc 376
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>ref|XM_469736.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 808

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 217 ccatcgtcgtcgtgggctccg 237
           |||||||||||||||||||||
Sbjct: 194 ccatcgtcgtcgtgggctccg 214
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>gb|AC150413.2| Branchiostoma floridae clone CH302-61A17, complete sequence
          Length = 240260

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 306    ggtcacagcctcgccggtggg 326
              |||||||||||||||||||||
Sbjct: 124741 ggtcacagcctcgccggtggg 124761
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 217      ccatcgtcgtcgtgggctccg 237
                |||||||||||||||||||||
Sbjct: 30464607 ccatcgtcgtcgtgggctccg 30464587
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>ref|XM_744391.1| Aspergillus fumigatus Af293 calcium/calmodulin-dependent protein
            kinase (Afu2g03490) partial mRNA
          Length = 1938

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 288  acggttgccgcgagtgccggt 308
            |||||||||||||||||||||
Sbjct: 1864 acggttgccgcgagtgccggt 1844
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>gb|AY100452.1| Mus musculus lmb145-cap1-243 protein precursor, mRNA, partial cds
          Length = 354

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  cgagtcagccttgttggcctactgg 25
          |||||| ||||||||||||||||||
Sbjct: 32 cgagtcggccttgttggcctactgg 56
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>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete
             sequence
          Length = 149380

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 217   ccatcgtcgtcgtgggctccg 237
             |||||||||||||||||||||
Sbjct: 12408 ccatcgtcgtcgtgggctccg 12428
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>dbj|AK122627.1| Homo sapiens cDNA FLJ16048 fis, clone FEBRA2008311, weakly  similar
            to GALANIN RECEPTOR TYPE 1
          Length = 5671

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1    cgagtcagccttgttggcctactgg 25
            |||||| ||||||||||||||||||
Sbjct: 3126 cgagtcggccttgttggcctactgg 3150
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>dbj|AK093337.1| Homo sapiens cDNA FLJ36018 fis, clone TESTI2016337, highly similar to
            BASIGIN PRECURSOR
          Length = 3712

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1    cgagtcagccttgttggcctactgg 25
            |||||| ||||||||||||||||||
Sbjct: 2097 cgagtcggccttgttggcctactgg 2121
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>dbj|AK027301.2| Homo sapiens cDNA FLJ14395 fis, clone HEMBA1003250, weakly
          similar to PROTEIN KINASE APK1A (EC 2.7.1.-)
          Length = 1781

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  cgagtcagccttgttggcctactgg 25
          |||||| ||||||||||||||||||
Sbjct: 4  cgagtcggccttgttggcctactgg 28
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>dbj|AK024117.1| Homo sapiens cDNA FLJ14055 fis, clone HEMBB1000264, weakly similar to
            CHL1 PROTEIN
          Length = 3181

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1    cgagtcagccttgttggcctactgg 25
            |||||| ||||||||||||||||||
Sbjct: 1749 cgagtcggccttgttggcctactgg 1773
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 197     cgccgccaatgcgccgccgcc 217
               |||||||||||||||||||||
Sbjct: 9774118 cgccgccaatgcgccgccgcc 9774098
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 217      ccatcgtcgtcgtgggctccg 237
                |||||||||||||||||||||
Sbjct: 30556029 ccatcgtcgtcgtgggctccg 30556009
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>dbj|AP005095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1063H10
          Length = 170453

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 197   cgccgccaatgcgccgccgcc 217
             |||||||||||||||||||||
Sbjct: 38050 cgccgccaatgcgccgccgcc 38030
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>dbj|AK107749.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-H07, full
           insert sequence
          Length = 754

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 1   cgagtcagccttgttggcctactgg 25
           |||||| ||||||||||||||||||
Sbjct: 709 cgagtcggccttgttggcctactgg 733
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>dbj|AK105040.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-E07, full
            insert sequence
          Length = 2278

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1    cgagtcagccttgttggcctactgg 25
            |||||| ||||||||||||||||||
Sbjct: 1405 cgagtcggccttgttggcctactgg 1429
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>dbj|AK105037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C07, full
           insert sequence
          Length = 1275

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 1   cgagtcagccttgttggcctactgg 25
           |||||| ||||||||||||||||||
Sbjct: 533 cgagtcggccttgttggcctactgg 557
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>dbj|AK060609.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-D03, full
           insert sequence
          Length = 955

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 1   cgagtcagccttgttggcctactgg 25
           |||||| ||||||||||||||||||
Sbjct: 564 cgagtcggccttgttggcctactgg 588
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>dbj|AK060557.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-D11, full
            insert sequence
          Length = 2744

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1    cgagtcagccttgttggcctactgg 25
            |||||| ||||||||||||||||||
Sbjct: 1139 cgagtcggccttgttggcctactgg 1163
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>dbj|AK058795.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-H05, full
           insert sequence
          Length = 886

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 217 ccatcgtcgtcgtgggctccg 237
           |||||||||||||||||||||
Sbjct: 292 ccatcgtcgtcgtgggctccg 312
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>ref|XM_475933.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1719

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 206  tgcgccgccgcccatcgtcgtcgt 229
            ||||||||||||| ||||||||||
Sbjct: 1236 tgcgccgccgcccttcgtcgtcgt 1213
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>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22,
              complete sequence
          Length = 173903

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 194    cgccgccgccaatgcgccgccgcc 217
              ||||||||||||||| ||||||||
Sbjct: 112209 cgccgccgccaatgccccgccgcc 112186
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>gb|AC098571.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B10,
             complete sequence
          Length = 127304

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 206   tgcgccgccgcccatcgtcgtcgt 229
             ||||||||||||| ||||||||||
Sbjct: 43890 tgcgccgccgcccttcgtcgtcgt 43913
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>emb|AL139151.13| Human DNA sequence from clone RP4-703F12 on chromosome 1p34.3-36.11,
             complete sequence
          Length = 80387

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   cttctccctcaaacctacct 183
             ||||||||||||||||||||
Sbjct: 56101 cttctccctcaaacctacct 56082
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>emb|BX065953.1|CNS09N1X Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC5AC04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 916

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 9   ccttgttggcctactggcct 28
           ||||||||||||||||||||
Sbjct: 850 ccttgttggcctactggcct 831
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>emb|BX065129.1|CNS09MF1 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC48DE10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 520

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 9   ccttgttggcctactggcct 28
           ||||||||||||||||||||
Sbjct: 507 ccttgttggcctactggcct 488
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>emb|AL731594.5|OSJN00234 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032N05,
              complete sequence
          Length = 159486

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    gccgccgcccatcgtcgtcg 228
              ||||||||||||||||||||
Sbjct: 148924 gccgccgcccatcgtcgtcg 148905
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>emb|AJ001294.1|CPPIPC Craterostigma plantagineum mRNA for major intrinsic protein PIPc
          Length = 800

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 193 tcgccgccgccaatgcgccg 212
           ||||||||||||||||||||
Sbjct: 533 tcgccgccgccaatgcgccg 514
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>gb|AE005879.1| Caulobacter crescentus CB15 section 205 of 359 of the complete genome
          Length = 11515

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 194  cgccgccgccaatgcgccgccgcc 217
            |||||||||||| |||||||||||
Sbjct: 8834 cgccgccgccaaggcgccgccgcc 8811
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>gb|AF259792.1| Homo sapiens p250R mRNA, complete cds
          Length = 5123

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 2  gagtcagccttgttggcctactgg 25
          ||||| ||||||||||||||||||
Sbjct: 29 gagtcggccttgttggcctactgg 52
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>dbj|AK029771.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930544E19 product:unclassifiable, full
           insert sequence
          Length = 3678

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 50  ttttctcaactcaaccccca 69
           ||||||||||||||||||||
Sbjct: 467 ttttctcaactcaaccccca 486
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 209     gccgccgcccatcgtcgtcg 228
               ||||||||||||||||||||
Sbjct: 4162919 gccgccgcccatcgtcgtcg 4162900
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 206      tgcgccgccgcccatcgtcgtcgt 229
                ||||||||||||| ||||||||||
Sbjct: 28516197 tgcgccgccgcccttcgtcgtcgt 28516220



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 194     cgccgccgccaatgcgccgccgcc 217
               ||||||||||||||| ||||||||
Sbjct: 2665689 cgccgccgccaatgccccgccgcc 2665666
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 342     gccgcctgcggggggcggct 361
               ||||||||||||||||||||
Sbjct: 2877791 gccgcctgcggggggcggct 2877772
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>gb|AC154436.2| Mus musculus BAC clone RP24-192B24 from chromosome 14, complete
             sequence
          Length = 180476

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    ttttctcaactcaaccccca 69
             ||||||||||||||||||||
Sbjct: 26535 ttttctcaactcaaccccca 26516
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>dbj|AK071919.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E14, full
           insert sequence
          Length = 2157

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 194 cgccgccgccaatgcgccgccgcc 217
           ||||||||||||||| ||||||||
Sbjct: 245 cgccgccgccaatgccccgccgcc 222
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>dbj|AK065630.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029I18, full
           insert sequence
          Length = 2231

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 194 cgccgccgccaatgcgccgccgcc 217
           ||||||||||||||| ||||||||
Sbjct: 311 cgccgccgccaatgccccgccgcc 288
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>emb|AL606654.3|OSJN00100 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0028M18,
            complete sequence
          Length = 132854

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 209  gccgccgcccatcgtcgtcg 228
            ||||||||||||||||||||
Sbjct: 5983 gccgccgcccatcgtcgtcg 5964
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>emb|CT025528.10| Mouse DNA sequence from clone RP23-205O23 on chromosome 14, complete
              sequence
          Length = 224168

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     ttttctcaactcaaccccca 69
              ||||||||||||||||||||
Sbjct: 169863 ttttctcaactcaaccccca 169844


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,767,645
Number of Sequences: 3902068
Number of extensions: 2767645
Number of successful extensions: 63018
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62487
Number of HSP's gapped (non-prelim): 531
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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