ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast70a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AGT23_ARATH (Q9SR86) Alanine--glyoxylate aminotransferase 2 homo... 101 5e-22
2AGT22_ARATH (Q94AL9) Alanine--glyoxylate aminotransferase 2 homo... 94 1e-19
3AGT21_ARATH (Q940M2) Alanine--glyoxylate aminotransferase 2 homo... 92 3e-19
4AGT2_RAT (Q64565) Alanine--glyoxylate aminotransferase 2, mitoch... 44 1e-04
5AGT2_PONPY (Q5RFA3) Alanine--glyoxylate aminotransferase 2, mito... 43 2e-04
6AGT2_HUMAN (Q9BYV1) Alanine--glyoxylate aminotransferase 2, mito... 43 2e-04
7ARGD_AERPE (Q9YBY6) Acetylornithine/acetyl-lysine aminotransfera... 32 0.40
8ARGD_LACLA (Q9CHD3) Acetylornithine aminotransferase (EC 2.6.1.1... 32 0.52
9ARGD_CHLTE (P59316) Acetylornithine aminotransferase (EC 2.6.1.1... 29 3.4
10ARGD_AQUAE (O66442) Acetylornithine aminotransferase (EC 2.6.1.1... 28 4.4
11ARGD_SULSO (Q7SI94) Acetylornithine/acetyl-lysine aminotransfera... 28 4.4
12ARGD_PYRKO (Q5JFW3) Acetylornithine aminotransferase (EC 2.6.1.1... 28 5.8
13ARGD_PYRAE (Q8ZV07) Acetylornithine/acetyl-lysine aminotransfera... 28 7.5
14TKT2_YEAST (P33315) Transketolase 2 (EC 2.2.1.1) (TK 2) 27 9.8
15OPSD_LOLFO (P24603) Rhodopsin 27 9.8
16YO1J_CAEEL (P91408) Probable aminotransferase T01B11.2 (EC 2.6.1.-) 27 9.8
17ARGD_SULTO (Q976K0) Acetylornithine/acetyl-lysine aminotransfera... 27 9.8

>AGT23_ARATH (Q9SR86) Alanine--glyoxylate aminotransferase 2 homolog 3,|
           mitochondrial precursor (EC 2.6.1.44)
           (Beta-alanine-pyruvate aminotransferase 3)
          Length = 481

 Score =  101 bits (251), Expect = 5e-22
 Identities = 44/59 (74%), Positives = 51/59 (86%)
 Frame = +3

Query: 147 KMPPFVYTPPPYDGPRVAEIAQKRAQFLSPSLFHFYDRPLNIVDGKMQYLFDEDGRRYL 323
           KMPPF Y+PPPYDGP  AEI  KR +FLSP+LFHFY+ PLNIV+ KMQY+FDE+GRRYL
Sbjct: 45  KMPPFNYSPPPYDGPSTAEIIAKRREFLSPALFHFYNTPLNIVEAKMQYVFDENGRRYL 103



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>AGT22_ARATH (Q94AL9) Alanine--glyoxylate aminotransferase 2 homolog 2,|
           mitochondrial precursor (EC 2.6.1.44)
           (Beta-alanine-pyruvate aminotransferase 2)
          Length = 477

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 44/81 (54%), Positives = 50/81 (61%)
 Frame = +3

Query: 81  RAHSSLTXXXXXXXXXXXXXXXKMPPFVYTPPPYDGPRVAEIAQKRAQFLSPSLFHFYDR 260
           R  SS +               ++PPF YTPPPY GP    I  KR +FLSPS+F  Y +
Sbjct: 20  RCISSTSQAATASVKDSDEFQARLPPFAYTPPPYTGPSADVILSKRKEFLSPSMFCLYRK 79

Query: 261 PLNIVDGKMQYLFDEDGRRYL 323
           PLNIVDGKMQYLFDE GRRYL
Sbjct: 80  PLNIVDGKMQYLFDESGRRYL 100



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>AGT21_ARATH (Q940M2) Alanine--glyoxylate aminotransferase 2 homolog 1,|
           mitochondrial precursor (EC 2.6.1.44)
           (Beta-alanine-pyruvate aminotransferase 1)
          Length = 476

 Score = 92.0 bits (227), Expect = 3e-19
 Identities = 39/58 (67%), Positives = 47/58 (81%)
 Frame = +3

Query: 150 MPPFVYTPPPYDGPRVAEIAQKRAQFLSPSLFHFYDRPLNIVDGKMQYLFDEDGRRYL 323
           +PPFV+ P PY GP   E+ QKR +FL PSLFH+Y +PLNIV+GKMQYL+DE GRRYL
Sbjct: 41  IPPFVHQPRPYKGPSADEVLQKRKKFLGPSLFHYYQKPLNIVEGKMQYLYDESGRRYL 98



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>AGT2_RAT (Q64565) Alanine--glyoxylate aminotransferase 2, mitochondrial|
           precursor (EC 2.6.1.44)
           ((R)-3-amino-2-methylpropionate--pyruvate transaminase)
           (EC 2.6.1.40) (AGT 2) (Beta-alanine-pyruvate
           aminotransferase) (Beta-ALAAT II) (D-AIBAT)
          Length = 512

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 20/58 (34%), Positives = 31/58 (53%)
 Frame = +3

Query: 150 MPPFVYTPPPYDGPRVAEIAQKRAQFLSPSLFHFYDRPLNIVDGKMQYLFDEDGRRYL 323
           MPP  ++P  Y       + +   Q LSP    ++ +PL +  G M++LFD +G RYL
Sbjct: 46  MPPCDFSPEKYQSLAYNHVLEIHKQHLSPVNTAYFQKPLLLHQGHMEWLFDSEGNRYL 103



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>AGT2_PONPY (Q5RFA3) Alanine--glyoxylate aminotransferase 2, mitochondrial|
           precursor (EC 2.6.1.44)
           ((R)-3-amino-2-methylpropionate--pyruvate transaminase)
           (EC 2.6.1.40) (AGT 2) (Beta-alanine-pyruvate
           aminotransferase) (Beta-ALAAT II) (D-AIBAT)
          Length = 514

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +3

Query: 147 KMPPFVYTPPPYDGPRVAEIAQKRAQFLSPSLFHFYDRPLNIVDGKMQYLFDEDGRRYL 323
           +MPP  + P  Y       + +   + LSP +  ++ +PL +  G M++LFD +G RYL
Sbjct: 47  RMPPCDFMPERYQSLGYNRVLEIHKEHLSPVVTAYFQKPLLLHQGHMEWLFDAEGNRYL 105



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>AGT2_HUMAN (Q9BYV1) Alanine--glyoxylate aminotransferase 2, mitochondrial|
           precursor (EC 2.6.1.44)
           ((R)-3-amino-2-methylpropionate--pyruvate transaminase)
           (EC 2.6.1.40) (AGT 2) (Beta-alanine-pyruvate
           aminotransferase) (Beta-ALAAT II) (D-AIBAT)
          Length = 514

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +3

Query: 147 KMPPFVYTPPPYDGPRVAEIAQKRAQFLSPSLFHFYDRPLNIVDGKMQYLFDEDGRRYL 323
           +MPP  + P  Y       + +   + LSP +  ++ +PL +  G M++LFD +G RYL
Sbjct: 47  RMPPCDFMPERYQSLGYNRVLEIHKEHLSPVVTAYFQKPLLLHQGHMEWLFDAEGSRYL 105



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>ARGD_AERPE (Q9YBY6) Acetylornithine/acetyl-lysine aminotransferase (EC|
           2.6.1.11) (EC 2.6.1.-) (ACOAT)
          Length = 388

 Score = 32.0 bits (71), Expect = 0.40
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +3

Query: 258 RPLNIVDGKMQYLFDEDGRRYL 323
           R L IV G MQY++D+ GR+YL
Sbjct: 14  RGLRIVKGSMQYVWDDSGRKYL 35



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>ARGD_LACLA (Q9CHD3) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)|
          Length = 377

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 237 SLFHFYDR-PLNIVDGKMQYLFDEDGRRYL 323
           +LF  Y R P +++ G+ QYLFD+ G +YL
Sbjct: 3   NLFENYGRLPFSLIKGEDQYLFDDRGNKYL 32



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>ARGD_CHLTE (P59316) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)|
          Length = 400

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 243 FHFYDR-PLNIVDGKMQYLFDEDGRRYL 323
           FH Y R PL+I  GK  +L+   G RYL
Sbjct: 16  FHNYARLPLDIASGKGSFLYTASGERYL 43



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>ARGD_AQUAE (O66442) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)|
          Length = 376

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 261 PLNIVDGKMQYLFDEDGRRYL 323
           P+  V GK  YL+DE+G+ YL
Sbjct: 12  PVKFVRGKGVYLYDEEGKEYL 32



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>ARGD_SULSO (Q7SI94) Acetylornithine/acetyl-lysine aminotransferase (EC|
           2.6.1.11) (EC 2.6.1.-) (ACOAT)
          Length = 392

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +3

Query: 240 LFHFY-DRPLNIVDGKMQYLFDEDGRRYL 323
           L  FY DR + I+ G+ QY++DE   +YL
Sbjct: 8   LLKFYQDRGIKIIKGEGQYVWDEKNNKYL 36



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>ARGD_PYRKO (Q5JFW3) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)|
          Length = 362

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +3

Query: 252 YDRPLNIVDGKMQYLFDEDGRRYL 323
           Y + L +V G+  Y++DE GRRYL
Sbjct: 4   YRKRLRLVRGEGVYVWDEKGRRYL 27



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>ARGD_PYRAE (Q8ZV07) Acetylornithine/acetyl-lysine aminotransferase (EC|
           2.6.1.11) (EC 2.6.1.-) (ACOAT)
          Length = 383

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 246 HFYDRPLNIVDGKMQYLFDEDGRRYL 323
           ++ +  + IV G MQY++D+ G+RY+
Sbjct: 7   YYREYGIRIVKGFMQYVWDDKGQRYI 32



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>TKT2_YEAST (P33315) Transketolase 2 (EC 2.2.1.1) (TK 2)|
          Length = 681

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 237 SLFHFYDRPLNIVDGKMQYLFDED 308
           +L  FYD     +DGK  Y FDED
Sbjct: 179 NLITFYDSNSISIDGKTSYSFDED 202



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>OPSD_LOLFO (P24603) Rhodopsin|
          Length = 452

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 223 WARFWAISATRGPSYGGGVYTNGGIL 146
           W+  WAI    GP +G G YT  G+L
Sbjct: 162 WSTIWAI----GPIFGWGAYTLEGVL 183



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>YO1J_CAEEL (P91408) Probable aminotransferase T01B11.2 (EC 2.6.1.-)|
          Length = 467

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +3

Query: 201 EIAQKRAQFLSPSLFHFY-DRPLNIVDGKMQYLFDEDGRRYL 323
           EI ++R   +      FY D P  +    MQYL+DE   ++L
Sbjct: 29  EILKRRKDTIGSKCQIFYSDDPFMVSRASMQYLYDEKSNKFL 70



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>ARGD_SULTO (Q976K0) Acetylornithine/acetyl-lysine aminotransferase (EC|
           2.6.1.11) (EC 2.6.1.-) (ACOAT)
          Length = 387

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 255 DRPLNIVDGKMQYLFDEDGRRYL 323
           DR L IV G+ QY++D  G +YL
Sbjct: 9   DRGLTIVKGEGQYVWDISGTKYL 31


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,083,423
Number of Sequences: 219361
Number of extensions: 380541
Number of successful extensions: 1017
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 80,573,946
effective HSP length: 83
effective length of database: 62,366,983
effective search space used: 1496807592
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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