>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09,
             complete sequence
          Length = 148740

 Score =  147 bits (74), Expect = 3e-32
 Identities = 92/98 (93%)
 Strand = Plus / Minus

                                                                         
Query: 165   tacacgccgccgccgtacgacgggccgcgggtggcggagatcgcccagaagcgggcccag 224
             ||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||| ||
Sbjct: 40105 tacacgccgccgccgtacgacgggccgcgggcggaggagatctcccggaagcgggccgag 40046

                                                   
Query: 225   ttcctcagcccctcgctcttccacttctacgaccgccc 262
             |||||||||||||| |||||||||||||||||||||||
Sbjct: 40045 ttcctcagcccctccctcttccacttctacgaccgccc 40008



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                        
Query: 264   ttgaacatagtcgatggaaagatgcagtacctgtttgatgaggatggtcgccgctacct 322
             ||||||||||||||||| || |||||||||||||| || |||||||| ||||| |||||
Sbjct: 38729 ttgaacatagtcgatgggaaaatgcagtacctgttcgacgaggatggccgccgttacct 38671



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 27    atgcagcgtctcgcctcctcccggcggctcctccaggc 64
             |||||||| ||||||||||||||| |||||||||||||
Sbjct: 40252 atgcagcgcctcgcctcctcccggaggctcctccaggc 40215

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  147 bits (74), Expect = 3e-32
 Identities = 92/98 (93%)
 Strand = Plus / Minus

                                                                            
Query: 165      tacacgccgccgccgtacgacgggccgcgggtggcggagatcgcccagaagcgggcccag 224
                ||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||| ||
Sbjct: 23214699 tacacgccgccgccgtacgacgggccgcgggcggaggagatctcccggaagcgggccgag 23214640

                                                      
Query: 225      ttcctcagcccctcgctcttccacttctacgaccgccc 262
                |||||||||||||| |||||||||||||||||||||||
Sbjct: 23214639 ttcctcagcccctccctcttccacttctacgaccgccc 23214602



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                           
Query: 264      ttgaacatagtcgatggaaagatgcagtacctgtttgatgaggatggtcgccgctacct 322
                ||||||||||||||||| || |||||||||||||| || |||||||| ||||| |||||
Sbjct: 23213323 ttgaacatagtcgatgggaaaatgcagtacctgttcgacgaggatggccgccgttacct 23213265



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 27       atgcagcgtctcgcctcctcccggcggctcctccaggc 64
                |||||||| ||||||||||||||| |||||||||||||
Sbjct: 23214846 atgcagcgcctcgcctcctcccggaggctcctccaggc 23214809

>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01,
              complete sequence
          Length = 146432

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                                 
Query: 212    gaagcgggcccagttcctcagcccctcgctcttccacttctacgaccgccc 262
              |||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 146427 gaagcgggccgagttcctcagcccctccctcttccacttctacgaccgccc 146377



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                         
Query: 264    ttgaacatagtcgatggaaagatgcagtacctgtttgatgaggatggtcgccgctacct 322
              ||||||||||||||||| || |||||||||||||| || |||||||| ||||| |||||
Sbjct: 145098 ttgaacatagtcgatgggaaaatgcagtacctgttcgacgaggatggccgccgttacct 145040

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 201      gagatcgcccagaagcgggcccagttcctcagcccctcgctcttccactt 250
                |||||||| | |||||| ||| ||||||||||||| || |||||||||||
Sbjct: 12533590 gagatcgcacggaagcgcgccgagttcctcagcccgtccctcttccactt 12533541

>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03,
             from chromosome 3, complete sequence
          Length = 124550

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 201   gagatcgcccagaagcgggcccagttcctcagcccctcgctcttccactt 250
             |||||||| | |||||| ||| ||||||||||||| || |||||||||||
Sbjct: 54351 gagatcgcacggaagcgcgccgagttcctcagcccgtccctcttccactt 54400

>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0030D15, from chromosome 3, complete sequence
          Length = 151972

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                
Query: 201    gagatcgcccagaagcgggcccagttcctcagcccctcgctcttccactt 250
              |||||||| | |||||| ||| ||||||||||||| || |||||||||||
Sbjct: 143399 gagatcgcacggaagcgcgccgagttcctcagcccgtccctcttccactt 143448

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 201      gagatcgcccagaagcgggcccagttcctcagcccctcgctcttccactt 250
                |||||||| | |||||| ||| ||||||||||||| || |||||||||||
Sbjct: 12530353 gagatcgcacggaagcgcgccgagttcctcagcccgtccctcttccactt 12530304

>dbj|AK060423.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-H01, full
           insert sequence
          Length = 1497

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 285 atgcagtacctgtttgatgaggatggtcgccgctacct 322
           |||||||||||||| || |||||||| ||||| |||||
Sbjct: 3   atgcagtacctgttcgacgaggatggccgccgttacct 40

>gb|AC084243.7| Homo sapiens chromosome 11, clone CTD-3224I3, complete sequence
          Length = 154201

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 224   gttcctcagcccctcgctctt 244
             |||||||||||||||||||||
Sbjct: 62530 gttcctcagcccctcgctctt 62550

>gb|DP000004.1| Lemur catta target 1 genomic scaffold
          Length = 1399362

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 10     aggtaacagggccagatatgc 30
              |||||||||||||||||||||
Sbjct: 714360 aggtaacagggccagatatgc 714340

>gb|AC007218.6| Homo sapiens chromosome 16 clone RP11-297M9, complete sequence
          Length = 193220

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 3     acagagaaggtaacagggcca 23
             |||||||||||||||||||||
Sbjct: 26567 acagagaaggtaacagggcca 26547

>gb|AC123542.4| Lemur catta clone LB2-136L13, complete sequence
          Length = 158703

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 10    aggtaacagggccagatatgc 30
             |||||||||||||||||||||
Sbjct: 57796 aggtaacagggccagatatgc 57776

>gb|AC007221.2|AC007221 Homo sapiens chromosome 16 clone RPCI-11_418I22, complete sequence
          Length = 230696

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 3      acagagaaggtaacagggcca 23
              |||||||||||||||||||||
Sbjct: 229334 acagagaaggtaacagggcca 229314

>gb|AC142298.1| Pan troglodytes BAC clone RP43-99N14 from 7, complete sequence
          Length = 162900

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 276  gatggaaagatgcagtacct 295
            ||||||||||||||||||||
Sbjct: 1543 gatggaaagatgcagtacct 1562

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 194     ggtggcggagatcgcccaga 213
               ||||||||||||||||||||
Sbjct: 1825308 ggtggcggagatcgcccaga 1825289

>dbj|AK121399.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131M07, full
           insert sequence
          Length = 2101

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 223 agttcctcagcccctcgctcttccactt 250
           ||||||||||||| || |||||||||||
Sbjct: 599 agttcctcagcccgtccctcttccactt 626

>gb|AC132132.4| Mus musculus BAC clone RP23-235K2 from 8, complete sequence
          Length = 198321

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      agacagagaaggtaacaggg 20
              ||||||||||||||||||||
Sbjct: 171318 agacagagaaggtaacaggg 171299


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,887,468
Number of Sequences: 3902068
Number of extensions: 1887468
Number of successful extensions: 29354
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29221
Number of HSP's gapped (non-prelim): 133
length of query: 323
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 301
effective length of database: 17,147,199,772
effective search space: 5161307131372
effective search space used: 5161307131372
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)