>BGLX_ERWCH (Q46684) Periplasmic beta-glucosidase/beta-xylosidase precursor|
           [Includes: Beta-glucosidase (EC 3.2.1.21) (Gentiobiase)
           (Cellobiase); Beta-xylosidase (EC 3.2.1.37)
           (1,4-beta-D-xylan xylohydrolase) (Xylan
           1,4-beta-xylosidase)]
          Length = 654

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = +3

Query: 261 YKDPKQPLGVRIKDLLGRMTLAEKIGQM 344
           Y+D + P   R  DL+ RMTLAEK G M
Sbjct: 58  YEDWRLPAAERAADLVSRMTLAEKAGVM 85

>PURA_THET8 (Q5SLS1) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 408

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +3

Query: 261 YKDPKQPLGVRIKDLLGRMTLAEKIGQMTQIERENATAEA 380
           Y D  + +G+R  DLL   TL E++ ++   E+ N+T EA
Sbjct: 129 YSDRARRVGIRAGDLLDEATLRERVRRLL-AEKPNSTREA 167

>PURA_THET2 (Q72GT4) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 408

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +3

Query: 261 YKDPKQPLGVRIKDLLGRMTLAEKIGQMTQIERENATAEA 380
           Y D  + +G+R  DLL   TL E++ ++   E+ N+T EA
Sbjct: 129 YSDRARRVGIRAGDLLDEATLRERVRRLL-AEKPNSTREA 167

>TSP2_BOVIN (Q95116) Thrombospondin-2 precursor (Corticotropin-induced secreted|
           protein) (CISP)
          Length = 1170

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -2

Query: 294 CERQEAASDPCT*DNPRFPTPPSRT*GEQRWSCGSSP 184
           C R+    D C   NP FP     +  +  WSCGS P
Sbjct: 541 CNRKSCPIDGCL-SNPCFPGAECSSFPDGSWSCGSCP 576

>Y2144_AQUAE (O67900) Hypothetical protein aq_2144|
          Length = 298

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 306 LGRMTLAEKIGQMTQIERENATAEAMSKYFI 398
           LG+  L E I  M  IE+EN   E++  YFI
Sbjct: 102 LGKKELQEAIDTMINIEKENLKEESIYDYFI 132

>PURA_BACSU (P29726) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 430

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3

Query: 261 YKDPKQPLGVRIKDLLGRMTLAEKIGQMTQIERENATAEAM 383
           Y D    +G+RI DLL R   AEK+ +   +E +N   E M
Sbjct: 136 YMDKAARIGIRIADLLDRDAFAEKLER--NLEEKNRLLEKM 174

>ZN121_HUMAN (P58317) Zinc finger protein 121 (Zinc finger protein 20)|
           (Fragment)
          Length = 295

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 194 EAPHLGTVSGTDHHRLYI*TSQFTTVTDGRPGEAAACG 81
           E P+     G  ++R Y+ T  F T T+ +P E   CG
Sbjct: 130 EKPYECNECGKAYNRFYLLTEHFKTHTEEKPFECKVCG 167

>TSP2_MOUSE (Q03350) Thrombospondin-2 precursor|
          Length = 1172

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 294 CERQEAASDPCT*DNPRFPTPPSRT*GEQRWSCGSSP 184
           C ++    D C   NP FP     +  +  WSCGS P
Sbjct: 543 CNKRSCPIDGCL-SNPCFPGAKCNSFPDGSWSCGSCP 578

>MURE_ECOL6 (Q8FL67) UDP-N-acetylmuramoylalanyl-D-glutamate--2,|
           6-diaminopimelate ligase (EC 6.3.2.13)
           (UDP-N-acetylmuramyl-tripeptide synthetase)
           (Meso-diaminopimelate-adding enzyme)
           (UDP-MurNAc-tripeptide synthetase)
          Length = 494

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = +3

Query: 162 GTRHSAKMGSFHKTTFVLLMFCLVALG--SADYLKYKDPKQPLGVRIKDLLGRMTLAEKI 335
           G   S  MG+F+ +  +L +  L+ALG   AD LK          R++ + GRM +    
Sbjct: 296 GEIESRLMGAFNVSNLLLALATLLALGYPLADLLK-------TAARLQPVCGRMEVFTAP 348

Query: 336 GQMTQIERENATAEAMSK 389
           G+ T +     T +A+ K
Sbjct: 349 GKPTVVVDYAHTPDALEK 366

>Y1401_METJA (Q58796) Probable ATP-dependent helicase MJ1401 (EC 3.6.1.-)|
          Length = 808

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = +3

Query: 213 LLMFCLVALGSADYLKYKDPKQPLGVRIKDLLGRMTLAEKIGQMTQIERE 362
           L +  LVAL +  YL++K+  + LG ++   +G   + +K+   T ++ +
Sbjct: 260 LFLVPLVALANQKYLEFKERYEKLGFKVSLRVGLGRIGKKVDVETSLDAD 309


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,368,482
Number of Sequences: 219361
Number of extensions: 1160900
Number of successful extensions: 3541
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3541
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)