ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast70a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 60 2e-09
2APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 59 6e-09
3FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 43 4e-04
4SFAH_HELAN (P81098) Seed fatty acyl-ester hydrolase (EC 3.1.1.1)... 38 0.010
5EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 34 0.15
6ZN326_MOUSE (O88291) Zinc finger protein 326 (Zinc finger protei... 30 3.6
7MUTS_WOLPM (P61673) DNA mismatch repair protein mutS 30 3.6
8LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglyc... 29 6.2
9PPAV_CAEEL (Q09448) Putative acid phosphatase C05C10.1 (EC 3.1.3.2) 28 8.1

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +1

Query: 271 VPCYFIFGDSLVDNGNNNYIVSLARANYPPYGIDF-AGGPSGRFTNGLTTVDVIAQLLG 444
           +P  F FGDS+ D GNNN + +  + NY PYG+DF  G  +GRF+NG    D I++ LG
Sbjct: 123 IPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLG 181



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 58.9 bits (141), Expect = 6e-09
 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = +1

Query: 271 VPCYFIFGDSLVDNGNNNYIVSLARANYPPYGIDFA-GGPSGRFTNGLTTVDVIAQLLG 444
           +P  F FGDS+ D GNNN + +  ++NY PYG+DF     +GRF+NG+   D +A+ +G
Sbjct: 202 IPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMG 260



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 23/57 (40%), Positives = 30/57 (52%)
 Frame = +1

Query: 274 PCYFIFGDSLVDNGNNNYIVSLARANYPPYGIDFAGGPSGRFTNGLTTVDVIAQLLG 444
           P  F FGDS  D G  +     A    PP+G  F G P+GR+ +G   +D IA+ LG
Sbjct: 29  PAIFNFGDSNSDTGGLSAAFGQAG---PPHGSSFFGSPAGRYCDGRLVIDFIAESLG 82



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>SFAH_HELAN (P81098) Seed fatty acyl-ester hydrolase (EC 3.1.1.1) (Fragment)|
          Length = 18

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = +1

Query: 262 DPQVPCYFIFGDSLVDNG 315
           DPQVP YFIFGDSL DNG
Sbjct: 1   DPQVPXYFIFGDSLYDNG 18



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>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +1

Query: 274 PCYFIFGDSLVDNGNNNYIVSLARANYP---PYGIDFAGGPSGRFTNGLTTVDVIAQ 435
           P  F FGDS  D G        A A YP   PYG  F    +GR+++G   +D IA+
Sbjct: 33  PAIFNFGDSNSDTGGK------AAAFYPLNPPYGETFFHRSTGRYSDGRLIIDFIAE 83



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>ZN326_MOUSE (O88291) Zinc finger protein 326 (Zinc finger protein-associated|
           with nuclear matrix of 75 kDa)
          Length = 580

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -2

Query: 426 DVDGGEAVGEAPGRAAGEVDAVGRVVGARQGHD 328
           DV+G E   EA   AAGE DAVG   GA +  +
Sbjct: 522 DVEGEEGTAEAA--AAGEADAVGEAEGAGEAEE 552



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>MUTS_WOLPM (P61673) DNA mismatch repair protein mutS|
          Length = 849

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = +1

Query: 286 IFGDSLVDNGNNNYIVSLARANYPPYGIDFAGGPSGRFTNGLTTVDVI 429
           I  DSL+++ +NNY+ S+   N   Y I +    +G+F + LT++  +
Sbjct: 140 IIEDSLLEDKSNNYLASIVEQN-DEYAISWLELSTGKFFHTLTSLKAL 186



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>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
          Length = 645

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 19/56 (33%), Positives = 24/56 (42%)
 Frame = +1

Query: 283 FIFGDSLVDNGNNNYIVSLARANYPPYGIDFAGGPSGRFTNGLTTVDVIAQLLGFD 450
           ++FGDSL D GNN             Y +D   G   +  N     D IAQ LG +
Sbjct: 29  YVFGDSLSDGGNNG-----------RYTVDGINGTESKLYN-----DFIAQQLGIE 68



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>PPAV_CAEEL (Q09448) Putative acid phosphatase C05C10.1 (EC 3.1.3.2)|
          Length = 471

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 429 DDVDGGEAVGEAPGRAAGEVDAVGRVVGAR 340
           D V GG  +GE  GR  GE++ +GR++  R
Sbjct: 20  DWVFGGGGLGELTGRGMGEMNNLGRLIRER 49


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,313,399
Number of Sequences: 219361
Number of extensions: 568319
Number of successful extensions: 1677
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1668
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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