>emb|AL592164.6| Human DNA sequence from clone RP13-126P21 on chromosome X Contains a
             ribosomal protein S11 (RPS11) pseudogene and a CpG island,
             complete sequence
          Length = 124687

 Score = 42.1 bits (21), Expect = 0.55
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     gccccaccaccaccacgccag 25
             |||||||||||||||||||||
Sbjct: 18127 gccccaccaccaccacgccag 18147

>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0019D02, complete sequence
          Length = 154692

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     gccccaccaccaccacgcca 24
             ||||||||||||||||||||
Sbjct: 50167 gccccaccaccaccacgcca 50148

>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     aaactccgaaggaaccaagc 117
              ||||||||||||||||||||
Sbjct: 805412 aaactccgaaggaaccaagc 805431



 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 8       ccaccaccaccacgccagagaat 30
               ||||||||||||| |||||||||
Sbjct: 2360002 ccaccaccaccacaccagagaat 2360024

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 5        gccccaccaccaccacgcca 24
                ||||||||||||||||||||
Sbjct: 19004902 gccccaccaccaccacgcca 19004883

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 123      gacgcaagcgccgccggcgg 142
                ||||||||||||||||||||
Sbjct: 25112322 gacgcaagcgccgccggcgg 25112303

>dbj|AP005254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0064I19
          Length = 111644

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   gacgcaagcgccgccggcgg 142
             ||||||||||||||||||||
Sbjct: 16497 gacgcaagcgccgccggcgg 16478

>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0025J22
          Length = 175355

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    gacgcaagcgccgccggcgg 142
              ||||||||||||||||||||
Sbjct: 168438 gacgcaagcgccgccggcgg 168419

>emb|AL662804.18| Mouse DNA sequence from clone RP23-341C5 on chromosome 11, complete
            sequence
          Length = 223438

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    ggccccaccaccaccacgcc 23
            ||||||||||||||||||||
Sbjct: 5954 ggccccaccaccaccacgcc 5935

>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     aaactccgaaggaaccaagc 117
              ||||||||||||||||||||
Sbjct: 815456 aaactccgaaggaaccaagc 815437



 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 8       ccaccaccaccacgccagagaat 30
               ||||||||||||| |||||||||
Sbjct: 1957047 ccaccaccaccacaccagagaat 1957025

>ref|NM_188099.1| Oryza sativa (japonica cultivar-group), Ozsa8531 predicted mRNA
          Length = 2253

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 2    tcggccccaccaccaccac 20
            |||||||||||||||||||
Sbjct: 1082 tcggccccaccaccaccac 1100

>ref|XM_467632.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2338

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 146 gggagatcgcggcggtggg 164
           |||||||||||||||||||
Sbjct: 195 gggagatcgcggcggtggg 213

>gb|AC132901.11| Mus musculus chromosome 13, clone RP24-282A18, complete sequence
          Length = 187090

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 72    acagtaggcagagagataacccc 94
             |||||||||| ||||||||||||
Sbjct: 48628 acagtaggcaaagagataacccc 48650

>ref|NM_016148.1| Homo sapiens SH3 and multiple ankyrin repeat domains 1 (SHANK1), mRNA
          Length = 6643

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 5    gccccaccaccaccacgcc 23
            |||||||||||||||||||
Sbjct: 3055 gccccaccaccaccacgcc 3073

>gb|AC105950.11| Mus musculus chromosome 12, clone RP24-386J17, complete sequence
          Length = 192207

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    acagtaggcagagagataa 90
             |||||||||||||||||||
Sbjct: 64052 acagtaggcagagagataa 64034

>emb|AL355798.7| Human DNA sequence from clone RP11-417A17 on chromosome 10 Contains the
             5' end of the APBB1IP gene for amyloid beta (A4) precursor
             protein-binding family B member 1 interacting protein and
             two CpG islands, complete sequence
          Length = 122948

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     cccaccaccaccacgccag 25
             |||||||||||||||||||
Sbjct: 18839 cccaccaccaccacgccag 18821

>emb|AL160270.19| Human DNA sequence from clone RP11-296L22 on chromosome 9 Contains the 5'
              end of the C9orf25 gene for chromosome 9 open reading frame
              25 (FLJ39031), the DNAI1 gene for dynein axonemal
              intermediate polypeptide 1, the CNTFR gene for ciliary
              neurotrophic factor receptor, a novel pseudogene, three
              novel genes, the 3' end of the DCTN3 gene for dynactin
              (p22) and five CpG islands, complete sequence
          Length = 199114

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      tcggccccaccaccaccac 20
              |||||||||||||||||||
Sbjct: 173970 tcggccccaccaccaccac 173988

>gb|AC073548.5| Homo sapiens chromosome 19 clone RP11-43N16, complete sequence
          Length = 167722

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 7      cccaccaccaccacgccag 25
              |||||||||||||||||||
Sbjct: 118217 cccaccaccaccacgccag 118235

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 125    cgcaagcgccgccggcggc 143
              |||||||||||||||||||
Sbjct: 750245 cgcaagcgccgccggcggc 750227

>gb|AC010325.7| Homo sapiens chromosome 19 clone CTD-2568A17, complete sequence
          Length = 166439

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 5    gccccaccaccaccacgcc 23
            |||||||||||||||||||
Sbjct: 1647 gccccaccaccaccacgcc 1629

>gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, complete sequence
          Length = 192097

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 5      gccccaccaccaccacgcc 23
              |||||||||||||||||||
Sbjct: 168570 gccccaccaccaccacgcc 168552

>gb|AC158534.2| Mus musculus BAC clone RP23-32O6 from chromosome 7, complete sequence
          Length = 242359

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 4      ggccccaccaccaccacgc 22
              |||||||||||||||||||
Sbjct: 163206 ggccccaccaccaccacgc 163188

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 146      gggagatcgcggcggtggg 164
                |||||||||||||||||||
Sbjct: 30536748 gggagatcgcggcggtggg 30536766

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 2       tcggccccaccaccaccac 20
               |||||||||||||||||||
Sbjct: 9727943 tcggccccaccaccaccac 9727925

>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0038F12
          Length = 190014

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 2      tcggccccaccaccaccac 20
              |||||||||||||||||||
Sbjct: 165946 tcggccccaccaccaccac 165928

>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0643A10
          Length = 187931

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 146   gggagatcgcggcggtggg 164
             |||||||||||||||||||
Sbjct: 48756 gggagatcgcggcggtggg 48774

>gb|AF226728.1|AF226728 Homo sapiens somatostatin receptor-interacting protein splice variant
            b (SSTRIP) mRNA, complete cds
          Length = 4785

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 5    gccccaccaccaccacgcc 23
            |||||||||||||||||||
Sbjct: 1197 gccccaccaccaccacgcc 1215

>dbj|AK102091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082P22, full
           insert sequence
          Length = 2339

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 146 gggagatcgcggcggtggg 164
           |||||||||||||||||||
Sbjct: 195 gggagatcgcggcggtggg 213

>gb|AF163302.1|AF163302 Homo sapiens somatostatin receptor interacting protein splice variant
            a (SSTRIP) mRNA, complete cds
          Length = 6643

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 5    gccccaccaccaccacgcc 23
            |||||||||||||||||||
Sbjct: 3055 gccccaccaccaccacgcc 3073

>gb|M30136.1|MUSP40M Mouse P40 T-cell and mast cell growth factor (mP40) gene, complete
           cds
          Length = 3808

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 72  acagtaggcagagagataacccc 94
           |||||||||| ||||||||||||
Sbjct: 843 acagtaggcaaagagataacccc 821


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,747,187
Number of Sequences: 3902068
Number of extensions: 1747187
Number of successful extensions: 264313
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 263350
Number of HSP's gapped (non-prelim): 963
length of query: 176
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 154
effective length of database: 17,147,199,772
effective search space: 2640668764888
effective search space used: 2640668764888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)