ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast70a01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507518.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1003_B06.26 mRNA Length = 1311 Score = 323 bits (163), Expect = 2e-85 Identities = 246/271 (90%), Gaps = 2/271 (0%) Strand = Plus / Plus Query: 74 cgggcgactcgccgtcgtccgccgcgttccacggcgagtgcttcgtcgttggggacaaca 133 |||| |||||| ||||| ||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 242 cgggggactcgacgtcggccggcgtattccacggcgagtgcttcgtcgtgggggataaca 301 Query: 134 tcgacaccgaccagatcatcccggccgagcacctgaccctcgtgccgtccaagcccgacg 193 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 302 tcgacaccgaccagatcatcccggccgagcacctgaccctggtcccgtccaagcccgacg 361 Query: 194 agtaccgcaagctcggctccttcgccttcgtgggcctcccctccgcggcctacccgattc 253 ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| | Sbjct: 362 agtaccgcaagctcggctcgttcgccttcgtcggcctccccaccgcggcctacccgacgc 421 Query: 254 cctttgt-gcccccggcgaggaatcgtcacgctacgccgtcatcatcggcggcgccaact 312 | || || |||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct: 422 cgttcgtcgcccccggcgaggagaccacccgctacgccgtcatcatcggcggcgccaact 481 Query: 313 tcggatgcggctcct-ccgcgagcacgcgcc 342 |||| |||||||||| ||||||||||||||| Sbjct: 482 tcggctgcggctcctcccgcgagcacgcgcc 512
>ref|XM_467111.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1081 Score = 323 bits (163), Expect = 2e-85 Identities = 246/271 (90%), Gaps = 2/271 (0%) Strand = Plus / Plus Query: 74 cgggcgactcgccgtcgtccgccgcgttccacggcgagtgcttcgtcgttggggacaaca 133 |||| |||||| ||||| ||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 233 cgggggactcgacgtcggccggcgtattccacggcgagtgcttcgtcgtgggggataaca 292 Query: 134 tcgacaccgaccagatcatcccggccgagcacctgaccctcgtgccgtccaagcccgacg 193 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 293 tcgacaccgaccagatcatcccggccgagcacctgaccctggtcccgtccaagcccgacg 352 Query: 194 agtaccgcaagctcggctccttcgccttcgtgggcctcccctccgcggcctacccgattc 253 ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| | Sbjct: 353 agtaccgcaagctcggctcgttcgccttcgtcggcctccccaccgcggcctacccgacgc 412 Query: 254 cctttgt-gcccccggcgaggaatcgtcacgctacgccgtcatcatcggcggcgccaact 312 | || || |||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct: 413 cgttcgtcgcccccggcgaggagaccacccgctacgccgtcatcatcggcggcgccaact 472 Query: 313 tcggatgcggctcct-ccgcgagcacgcgcc 342 |||| |||||||||| ||||||||||||||| Sbjct: 473 tcggctgcggctcctcccgcgagcacgcgcc 503
>ref|XM_507517.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1003_B06.26 mRNA Length = 1092 Score = 323 bits (163), Expect = 2e-85 Identities = 246/271 (90%), Gaps = 2/271 (0%) Strand = Plus / Plus Query: 74 cgggcgactcgccgtcgtccgccgcgttccacggcgagtgcttcgtcgttggggacaaca 133 |||| |||||| ||||| ||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 211 cgggggactcgacgtcggccggcgtattccacggcgagtgcttcgtcgtgggggataaca 270 Query: 134 tcgacaccgaccagatcatcccggccgagcacctgaccctcgtgccgtccaagcccgacg 193 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 271 tcgacaccgaccagatcatcccggccgagcacctgaccctggtcccgtccaagcccgacg 330 Query: 194 agtaccgcaagctcggctccttcgccttcgtgggcctcccctccgcggcctacccgattc 253 ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| | Sbjct: 331 agtaccgcaagctcggctcgttcgccttcgtcggcctccccaccgcggcctacccgacgc 390 Query: 254 cctttgt-gcccccggcgaggaatcgtcacgctacgccgtcatcatcggcggcgccaact 312 | || || |||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct: 391 cgttcgtcgcccccggcgaggagaccacccgctacgccgtcatcatcggcggcgccaact 450 Query: 313 tcggatgcggctcct-ccgcgagcacgcgcc 342 |||| |||||||||| ||||||||||||||| Sbjct: 451 tcggctgcggctcctcccgcgagcacgcgcc 481
>ref|XM_506891.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1003_B06.26 mRNA Length = 1141 Score = 323 bits (163), Expect = 2e-85 Identities = 246/271 (90%), Gaps = 2/271 (0%) Strand = Plus / Plus Query: 74 cgggcgactcgccgtcgtccgccgcgttccacggcgagtgcttcgtcgttggggacaaca 133 |||| |||||| ||||| ||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 245 cgggggactcgacgtcggccggcgtattccacggcgagtgcttcgtcgtgggggataaca 304 Query: 134 tcgacaccgaccagatcatcccggccgagcacctgaccctcgtgccgtccaagcccgacg 193 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 305 tcgacaccgaccagatcatcccggccgagcacctgaccctggtcccgtccaagcccgacg 364 Query: 194 agtaccgcaagctcggctccttcgccttcgtgggcctcccctccgcggcctacccgattc 253 ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| | Sbjct: 365 agtaccgcaagctcggctcgttcgccttcgtcggcctccccaccgcggcctacccgacgc 424 Query: 254 cctttgt-gcccccggcgaggaatcgtcacgctacgccgtcatcatcggcggcgccaact 312 | || || |||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct: 425 cgttcgtcgcccccggcgaggagaccacccgctacgccgtcatcatcggcggcgccaact 484 Query: 313 tcggatgcggctcct-ccgcgagcacgcgcc 342 |||| |||||||||| ||||||||||||||| Sbjct: 485 tcggctgcggctcctcccgcgagcacgcgcc 515
>gb|AY363174.1| Oryza sativa (japonica cultivar-group) 3-isopropylmalate dehydratase small subunit (IPMDHSU) mRNA, complete cds Length = 1063 Score = 323 bits (163), Expect = 2e-85 Identities = 246/271 (90%), Gaps = 2/271 (0%) Strand = Plus / Plus Query: 74 cgggcgactcgccgtcgtccgccgcgttccacggcgagtgcttcgtcgttggggacaaca 133 |||| |||||| ||||| ||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 218 cgggggactcgacgtcggccggcgtattccacggcgagtgcttcgtcgtgggggataaca 277 Query: 134 tcgacaccgaccagatcatcccggccgagcacctgaccctcgtgccgtccaagcccgacg 193 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 278 tcgacaccgaccagatcatcccggccgagcacctgaccctggtcccgtccaagcccgacg 337 Query: 194 agtaccgcaagctcggctccttcgccttcgtgggcctcccctccgcggcctacccgattc 253 ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| | Sbjct: 338 agtaccgcaagctcggctcgttcgccttcgttggcctccccaccgcggcctacccgacgc 397 Query: 254 cctttgt-gcccccggcgaggaatcgtcacgctacgccgtcatcatcggcggcgccaact 312 | || || |||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct: 398 cgttcgtcgcccccggcgaggagaccacccgctacgccgtcatcatcggcggcgccaact 457 Query: 313 tcggatgcggctcct-ccgcgagcacgcgcc 342 |||| |||||||||| ||||||||||||||| Sbjct: 458 tcggctgcggctcctcccgcgagcacgcgcc 488
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 323 bits (163), Expect = 2e-85 Identities = 246/271 (90%), Gaps = 2/271 (0%) Strand = Plus / Minus Query: 74 cgggcgactcgccgtcgtccgccgcgttccacggcgagtgcttcgtcgttggggacaaca 133 |||| |||||| ||||| ||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 26487529 cgggggactcgacgtcggccggcgtattccacggcgagtgcttcgtcgtgggggataaca 26487470 Query: 134 tcgacaccgaccagatcatcccggccgagcacctgaccctcgtgccgtccaagcccgacg 193 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 26487469 tcgacaccgaccagatcatcccggccgagcacctgaccctggtcccgtccaagcccgacg 26487410 Query: 194 agtaccgcaagctcggctccttcgccttcgtgggcctcccctccgcggcctacccgattc 253 ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| | Sbjct: 26487409 agtaccgcaagctcggctcgttcgccttcgtcggcctccccaccgcggcctacccgacgc 26487350 Query: 254 cctttgt-gcccccggcgaggaatcgtcacgctacgccgtcatcatcggcggcgccaact 312 | || || |||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct: 26487349 cgttcgtcgcccccggcgaggagaccacccgctacgccgtcatcatcggcggcgccaact 26487290 Query: 313 tcggatgcggctcct-ccgcgagcacgcgcc 342 |||| |||||||||| ||||||||||||||| Sbjct: 26487289 tcggctgcggctcctcccgcgagcacgcgcc 26487259
>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_B06 Length = 131956 Score = 323 bits (163), Expect = 2e-85 Identities = 246/271 (90%), Gaps = 2/271 (0%) Strand = Plus / Minus Query: 74 cgggcgactcgccgtcgtccgccgcgttccacggcgagtgcttcgtcgttggggacaaca 133 |||| |||||| ||||| ||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 87445 cgggggactcgacgtcggccggcgtattccacggcgagtgcttcgtcgtgggggataaca 87386 Query: 134 tcgacaccgaccagatcatcccggccgagcacctgaccctcgtgccgtccaagcccgacg 193 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 87385 tcgacaccgaccagatcatcccggccgagcacctgaccctggtcccgtccaagcccgacg 87326 Query: 194 agtaccgcaagctcggctccttcgccttcgtgggcctcccctccgcggcctacccgattc 253 ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| | Sbjct: 87325 agtaccgcaagctcggctcgttcgccttcgtcggcctccccaccgcggcctacccgacgc 87266 Query: 254 cctttgt-gcccccggcgaggaatcgtcacgctacgccgtcatcatcggcggcgccaact 312 | || || |||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct: 87265 cgttcgtcgcccccggcgaggagaccacccgctacgccgtcatcatcggcggcgccaact 87206 Query: 313 tcggatgcggctcct-ccgcgagcacgcgcc 342 |||| |||||||||| ||||||||||||||| Sbjct: 87205 tcggctgcggctcctcccgcgagcacgcgcc 87175
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 323 bits (163), Expect = 2e-85 Identities = 246/271 (90%), Gaps = 2/271 (0%) Strand = Plus / Minus Query: 74 cgggcgactcgccgtcgtccgccgcgttccacggcgagtgcttcgtcgttggggacaaca 133 |||| |||||| ||||| ||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 29910 cgggggactcgacgtcggccggcgtattccacggcgagtgcttcgtcgtgggggataaca 29851 Query: 134 tcgacaccgaccagatcatcccggccgagcacctgaccctcgtgccgtccaagcccgacg 193 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 29850 tcgacaccgaccagatcatcccggccgagcacctgaccctggtcccgtccaagcccgacg 29791 Query: 194 agtaccgcaagctcggctccttcgccttcgtgggcctcccctccgcggcctacccgattc 253 ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| | Sbjct: 29790 agtaccgcaagctcggctcgttcgccttcgtcggcctccccaccgcggcctacccgacgc 29731 Query: 254 cctttgt-gcccccggcgaggaatcgtcacgctacgccgtcatcatcggcggcgccaact 312 | || || |||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct: 29730 cgttcgtcgcccccggcgaggagaccacccgctacgccgtcatcatcggcggcgccaact 29671 Query: 313 tcggatgcggctcct-ccgcgagcacgcgcc 342 |||| |||||||||| ||||||||||||||| Sbjct: 29670 tcggctgcggctcctcccgcgagcacgcgcc 29640
>dbj|AK120006.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-A03, full insert sequence Length = 1311 Score = 323 bits (163), Expect = 2e-85 Identities = 246/271 (90%), Gaps = 2/271 (0%) Strand = Plus / Plus Query: 74 cgggcgactcgccgtcgtccgccgcgttccacggcgagtgcttcgtcgttggggacaaca 133 |||| |||||| ||||| ||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 242 cgggggactcgacgtcggccggcgtattccacggcgagtgcttcgtcgtgggggataaca 301 Query: 134 tcgacaccgaccagatcatcccggccgagcacctgaccctcgtgccgtccaagcccgacg 193 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 302 tcgacaccgaccagatcatcccggccgagcacctgaccctggtcccgtccaagcccgacg 361 Query: 194 agtaccgcaagctcggctccttcgccttcgtgggcctcccctccgcggcctacccgattc 253 ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| | Sbjct: 362 agtaccgcaagctcggctcgttcgccttcgtcggcctccccaccgcggcctacccgacgc 421 Query: 254 cctttgt-gcccccggcgaggaatcgtcacgctacgccgtcatcatcggcggcgccaact 312 | || || |||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct: 422 cgttcgtcgcccccggcgaggagaccacccgctacgccgtcatcatcggcggcgccaact 481 Query: 313 tcggatgcggctcct-ccgcgagcacgcgcc 342 |||| |||||||||| ||||||||||||||| Sbjct: 482 tcggctgcggctcctcccgcgagcacgcgcc 512
>dbj|AK106107.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D01, full insert sequence Length = 1141 Score = 323 bits (163), Expect = 2e-85 Identities = 246/271 (90%), Gaps = 2/271 (0%) Strand = Plus / Plus Query: 74 cgggcgactcgccgtcgtccgccgcgttccacggcgagtgcttcgtcgttggggacaaca 133 |||| |||||| ||||| ||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 245 cgggggactcgacgtcggccggcgtattccacggcgagtgcttcgtcgtgggggataaca 304 Query: 134 tcgacaccgaccagatcatcccggccgagcacctgaccctcgtgccgtccaagcccgacg 193 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 305 tcgacaccgaccagatcatcccggccgagcacctgaccctggtcccgtccaagcccgacg 364 Query: 194 agtaccgcaagctcggctccttcgccttcgtgggcctcccctccgcggcctacccgattc 253 ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| | Sbjct: 365 agtaccgcaagctcggctcgttcgccttcgtcggcctccccaccgcggcctacccgacgc 424 Query: 254 cctttgt-gcccccggcgaggaatcgtcacgctacgccgtcatcatcggcggcgccaact 312 | || || |||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct: 425 cgttcgtcgcccccggcgaggagaccacccgctacgccgtcatcatcggcggcgccaact 484 Query: 313 tcggatgcggctcct-ccgcgagcacgcgcc 342 |||| |||||||||| ||||||||||||||| Sbjct: 485 tcggctgcggctcctcccgcgagcacgcgcc 515
>dbj|AK061544.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A03, full insert sequence Length = 1081 Score = 323 bits (163), Expect = 2e-85 Identities = 246/271 (90%), Gaps = 2/271 (0%) Strand = Plus / Plus Query: 74 cgggcgactcgccgtcgtccgccgcgttccacggcgagtgcttcgtcgttggggacaaca 133 |||| |||||| ||||| ||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 233 cgggggactcgacgtcggccggcgtattccacggcgagtgcttcgtcgtgggggataaca 292 Query: 134 tcgacaccgaccagatcatcccggccgagcacctgaccctcgtgccgtccaagcccgacg 193 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 293 tcgacaccgaccagatcatcccggccgagcacctgaccctggtcccgtccaagcccgacg 352 Query: 194 agtaccgcaagctcggctccttcgccttcgtgggcctcccctccgcggcctacccgattc 253 ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| | Sbjct: 353 agtaccgcaagctcggctcgttcgccttcgtcggcctccccaccgcggcctacccgacgc 412 Query: 254 cctttgt-gcccccggcgaggaatcgtcacgctacgccgtcatcatcggcggcgccaact 312 | || || |||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct: 413 cgttcgtcgcccccggcgaggagaccacccgctacgccgtcatcatcggcggcgccaact 472 Query: 313 tcggatgcggctcct-ccgcgagcacgcgcc 342 |||| |||||||||| ||||||||||||||| Sbjct: 473 tcggctgcggctcctcccgcgagcacgcgcc 503
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 323 bits (163), Expect = 2e-85 Identities = 246/271 (90%), Gaps = 2/271 (0%) Strand = Plus / Minus Query: 74 cgggcgactcgccgtcgtccgccgcgttccacggcgagtgcttcgtcgttggggacaaca 133 |||| |||||| ||||| ||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 193214 cgggggactcgacgtcggccggcgtattccacggcgagtgcttcgtcgtgggggataaca 193155 Query: 134 tcgacaccgaccagatcatcccggccgagcacctgaccctcgtgccgtccaagcccgacg 193 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 193154 tcgacaccgaccagatcatcccggccgagcacctgaccctggtcccgtccaagcccgacg 193095 Query: 194 agtaccgcaagctcggctccttcgccttcgtgggcctcccctccgcggcctacccgattc 253 ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| | Sbjct: 193094 agtaccgcaagctcggctcgttcgccttcgttggcctccccaccgcggcctacccgacgc 193035 Query: 254 cctttgt-gcccccggcgaggaatcgtcacgctacgccgtcatcatcggcggcgccaact 312 | || || |||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct: 193034 cgttcgtcgcccccggcgaggagaccacccgctacgccgtcatcatcggcggcgccaact 192975 Query: 313 tcggatgcggctcct-ccgcgagcacgcgcc 342 |||| |||||||||| ||||||||||||||| Sbjct: 192974 tcggctgcggctcctcccgcgagcacgcgcc 192944
>dbj|AK103778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145B21, full insert sequence Length = 1092 Score = 315 bits (159), Expect = 5e-83 Identities = 245/271 (90%), Gaps = 2/271 (0%) Strand = Plus / Plus Query: 74 cgggcgactcgccgtcgtccgccgcgttccacggcgagtgcttcgtcgttggggacaaca 133 |||| |||||| ||||| ||| || ||||||||||||||||||||||| ||||| |||| Sbjct: 211 cgggggactcgacgtcggccggcgtattccacggcgagtgcttcgtcgtgggggataaca 270 Query: 134 tcgacaccgaccagatcatcccggccgagcacctgaccctcgtgccgtccaagcccgacg 193 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 271 tcgacaccgaccagatcatcccggccgagcacctgaccctggtcccgtccaagcccgacg 330 Query: 194 agtaccgcaagctcggctccttcgccttcgtgggcctcccctccgcggcctacccgattc 253 ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| | Sbjct: 331 agtaccgcaagctcggctcgttcgccttcgtcggcctccccaccgcggcctacccgacgc 390 Query: 254 cctttgt-gcccccggcgaggaatcgtcacgctacgccgtcatcatcggcggcgccaact 312 | || || |||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct: 391 cgttcgtcgcccccggcgaggagaccacccgctacgccgtcatcatcggcggcgccaact 450 Query: 313 tcggatgcggctcct-ccgcgagcacgcgcc 342 |||| |||||||||| |||||||||| |||| Sbjct: 451 tcggctgcggctcctcccgcgagcacacgcc 481
>gb|BT009140.1| Triticum aestivum clone wl1n.pk0048.a6:fis, full insert mRNA sequence Length = 1005 Score = 230 bits (116), Expect = 2e-57 Identities = 229/264 (86%), Gaps = 2/264 (0%) Strand = Plus / Plus Query: 81 ctcgccgtcgtccgccgcgttccacggcgagtgcttcgtcgttggggacaacatcgacac 140 |||||||||||| |||| |||||||||||||||||||| || || ||||| |||||||| Sbjct: 165 ctcgccgtcgtcagccgttttccacggcgagtgcttcgtggtgggcgacaatatcgacac 224 Query: 141 cgaccagatcatcccggccgagcacctgaccctcgtgccgtccaagcccgacgagtaccg 200 ||||||||||||||| ||||||||||| || || ||||| |||||||| ||||||||||| Sbjct: 225 cgaccagatcatccccgccgagcacctcactctggtgccctccaagccggacgagtaccg 284 Query: 201 caagctcggctccttcgccttcgtgggcctcccctccgcggcctacccgattccctttgt 260 ||||||||| ||||||||||||| ||| ||||| |||||||||||||||| || || || Sbjct: 285 caagctcggttccttcgccttcgcggggctcccatccgcggcctacccgacgccgttcgt 344 Query: 261 -gcccccggcgaggaatcgtcacgctacgccgtcatcatcggcggcgccaacttcggatg 319 || || || ||||| || || ||||||||| |||| ||||||| ||||||||||| || Sbjct: 345 cgctccgggtgaggagtcctcccgctacgccatcattgtcggcggagccaacttcgggtg 404 Query: 320 cggctcctc-cgcgagcacgcgcc 342 ||| ||||| |||||||||||||| Sbjct: 405 cggttcctctcgcgagcacgcgcc 428
>gb|AY109732.1| Zea mays CL1042_1 mRNA sequence Length = 1085 Score = 230 bits (116), Expect = 2e-57 Identities = 229/264 (86%), Gaps = 2/264 (0%) Strand = Plus / Plus Query: 81 ctcgccgtcgtccgccgcgttccacggcgagtgcttcgtcgttggggacaacatcgacac 140 |||||||||||| |||| |||||||||||||||||||| || || ||||| |||||||| Sbjct: 190 ctcgccgtcgtcagccgttttccacggcgagtgcttcgtggtgggcgacaatatcgacac 249 Query: 141 cgaccagatcatcccggccgagcacctgaccctcgtgccgtccaagcccgacgagtaccg 200 ||||||||||||||| ||||||||||| || || ||||| |||||||| ||||||||||| Sbjct: 250 cgaccagatcatccccgccgagcacctcactctggtgccctccaagccggacgagtaccg 309 Query: 201 caagctcggctccttcgccttcgtgggcctcccctccgcggcctacccgattccctttgt 260 ||||||||| ||||||||||||| ||| ||||| |||||||||||||||| || || || Sbjct: 310 caagctcggttccttcgccttcgcggggctcccatccgcggcctacccgacgccgttcgt 369 Query: 261 -gcccccggcgaggaatcgtcacgctacgccgtcatcatcggcggcgccaacttcggatg 319 || || || ||||| || || ||||||||| |||| ||||||| ||||||||||| || Sbjct: 370 cgctccgggtgaggagtcctcccgctacgccatcattgtcggcggagccaacttcgggtg 429 Query: 320 cggctcctc-cgcgagcacgcgcc 342 ||| ||||| |||||||||||||| Sbjct: 430 cggttcctctcgcgagcacgcgcc 453
>gb|BT016386.1| Zea mays clone Contig219 mRNA sequence Length = 1075 Score = 214 bits (108), Expect = 1e-52 Identities = 227/264 (85%), Gaps = 2/264 (0%) Strand = Plus / Plus Query: 81 ctcgccgtcgtccgccgcgttccacggcgagtgcttcgtcgttggggacaacatcgacac 140 |||||||||||| |||| |||||||||||||||||||| || || ||||| |||||||| Sbjct: 228 ctcgccgtcgtcagccgttttccacggcgagtgcttcgtggtgggcgacaatatcgacac 287 Query: 141 cgaccagatcatcccggccgagcacctgaccctcgtgccgtccaagcccgacgagtaccg 200 |||||||||||||| ||||||||||| || || ||||| |||||||| ||||||||||| Sbjct: 288 tgaccagatcatccccgccgagcacctcactctggtgccctccaagccggacgagtaccg 347 Query: 201 caagctcggctccttcgccttcgtgggcctcccctccgcggcctacccgattccctttgt 260 ||||||||| ||||||||||||| ||| ||||| ||||| |||||||||| || || || Sbjct: 348 caagctcggttccttcgccttcgcggggctcccatccgcagcctacccgacgccgttcgt 407 Query: 261 -gcccccggcgaggaatcgtcacgctacgccgtcatcatcggcggcgccaacttcggatg 319 || || || ||||| || || ||||||||| |||| ||||||| ||||||||||| || Sbjct: 408 cgctccgggtgaggagtcctcccgctacgccatcattgtcggcggagccaacttcgggtg 467 Query: 320 cggctcctc-cgcgagcacgcgcc 342 ||| ||||| |||||||||||||| Sbjct: 468 cggttcctctcgcgagcacgcgcc 491
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 133 atcgacaccgaccagatcatcccggccgagcacctg 168 |||||||||||||||||||| || |||||||||||| Sbjct: 614992 atcgacaccgaccagatcattcccgccgagcacctg 614957
>gb|AE010370.1| Methanopyrus kandleri AV19 section 69 of 157 of the complete genome Length = 12992 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 124 ggggacaacatcgacaccgaccagatcatcccgg 157 |||||| | ||||||||||||||||||||||||| Sbjct: 3450 ggggacgatatcgacaccgaccagatcatcccgg 3483
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 130 aacatcgacaccgaccagatcatcccggccgagcacct 167 ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 701252 aacatagacacggaccagatcatcccggctgagcacct 701215
>ref|NM_129871.2| Arabidopsis thaliana hydro-lyase AT2G43100 mRNA, complete cds Length = 1030 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 gacaacatcgacaccgaccagatcatccc 155 |||||||| |||||||||||||||||||| Sbjct: 278 gacaacatagacaccgaccagatcatccc 306
>gb|CP000321.1| Nitrobacter hamburgensis X14 plasmid 2, complete sequence Length = 188318 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 189 cgacgagtaccgcaagctcggctccttcg 217 |||||| |||||||||||||||||||||| Sbjct: 85208 cgacgattaccgcaagctcggctccttcg 85180
>gb|AY117208.1| Arabidopsis thaliana putative 3-isopropylmalate dehydratase small subunit (At2g43100) mRNA, complete cds Length = 802 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 gacaacatcgacaccgaccagatcatccc 155 |||||||| |||||||||||||||||||| Sbjct: 253 gacaacatagacaccgaccagatcatccc 281
>gb|AY063828.1| Arabidopsis thaliana putative 3-isopropylmalate dehydratase small subunit (At2g43100) mRNA, complete cds Length = 966 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 gacaacatcgacaccgaccagatcatccc 155 |||||||| |||||||||||||||||||| Sbjct: 267 gacaacatagacaccgaccagatcatccc 295
>gb|AC006224.4| Arabidopsis thaliana chromosome 2 clone MFL8 map CIC10F02, complete sequence Length = 45714 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 127 gacaacatcgacaccgaccagatcatccc 155 |||||||| |||||||||||||||||||| Sbjct: 7782 gacaacatagacaccgaccagatcatccc 7754
>gb|AC004450.3| Arabidopsis thaliana chromosome 2 clone F14B2 map CIC10F02, complete sequence Length = 90283 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 gacaacatcgacaccgaccagatcatccc 155 |||||||| |||||||||||||||||||| Sbjct: 10000 gacaacatagacaccgaccagatcatccc 10028
>gb|AY060594.1| Arabidopsis thaliana At2g43100/MFL8.4 mRNA, complete cds Length = 1014 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 gacaacatcgacaccgaccagatcatccc 155 |||||||| |||||||||||||||||||| Sbjct: 274 gacaacatagacaccgaccagatcatccc 302
>emb|BX821684.1|CNS0AA5B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL64ZG06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 990 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 gacaacatcgacaccgaccagatcatccc 155 |||||||| |||||||||||||||||||| Sbjct: 263 gacaacatagacaccgaccagatcatccc 291
>emb|BX821620.1|CNS0A8BQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL59ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 905 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 gacaacatcgacaccgaccagatcatccc 155 |||||||| |||||||||||||||||||| Sbjct: 259 gacaacatagacaccgaccagatcatccc 287
>emb|BX821099.1|CNS0A8CM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL15ZE03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 882 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 gacaacatcgacaccgaccagatcatccc 155 |||||||| |||||||||||||||||||| Sbjct: 216 gacaacatagacaccgaccagatcatccc 244
>emb|BX821439.1|CNS0A86Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL41ZE11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 947 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 127 gacaacatcgacaccgaccagatcatccc 155 |||||||| |||||||||||||||||||| Sbjct: 259 gacaacatagacaccgaccagatcatccc 287
>emb|BX248357.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 4/8 Length = 349535 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 129 caacatcgacaccgaccagatcatcccggccg 160 |||| |||||||||||||||||||||| |||| Sbjct: 75947 caacgtcgacaccgaccagatcatcccagccg 75978
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 136 gacaccgaccagatcatcccggcc 159 |||||||||||||||||||||||| Sbjct: 2217540 gacaccgaccagatcatcccggcc 2217517 Score = 42.1 bits (21), Expect = 1.1 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 303 ggcgccaacttcggatgcggctcctc-cgcgagcacgcgcc 342 |||| ||||||||| |||||||| || |||||||||||||| Sbjct: 2217378 ggcgacaacttcggctgcggctcgtcgcgcgagcacgcgcc 2217338
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 48.1 bits (24), Expect = 0.019 Identities = 27/28 (96%) Strand = Plus / Plus Query: 131 acatcgacaccgaccagatcatcccggc 158 ||||||||||||||| |||||||||||| Sbjct: 3615506 acatcgacaccgaccggatcatcccggc 3615533
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 46.1 bits (23), Expect = 0.073 Identities = 26/27 (96%) Strand = Plus / Plus Query: 134 tcgacaccgaccagatcatcccggccg 160 |||||||||||||||||||||| |||| Sbjct: 990000 tcgacaccgaccagatcatccccgccg 990026
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 46.1 bits (23), Expect = 0.073 Identities = 26/27 (96%) Strand = Plus / Plus Query: 284 ctacgccgtcatcatcggcggcgccaa 310 ||||| ||||||||||||||||||||| Sbjct: 1204188 ctacgtcgtcatcatcggcggcgccaa 1204214
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 46.1 bits (23), Expect = 0.073 Identities = 26/27 (96%) Strand = Plus / Plus Query: 129 caacatcgacaccgaccagatcatccc 155 |||| |||||||||||||||||||||| Sbjct: 2394204 caacgtcgacaccgaccagatcatccc 2394230
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 46.1 bits (23), Expect = 0.073 Identities = 26/27 (96%) Strand = Plus / Minus Query: 134 tcgacaccgaccagatcatcccggccg 160 |||||||||||||||||||||| |||| Sbjct: 1435878 tcgacaccgaccagatcatccccgccg 1435852
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 46.1 bits (23), Expect = 0.073 Identities = 26/27 (96%) Strand = Plus / Plus Query: 129 caacatcgacaccgaccagatcatccc 155 |||| |||||||||||||||||||||| Sbjct: 72499 caacgtcgacaccgaccagatcatccc 72525
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 46.1 bits (23), Expect = 0.073 Identities = 26/27 (96%) Strand = Plus / Plus Query: 129 caacatcgacaccgaccagatcatccc 155 |||| |||||||||||||||||||||| Sbjct: 2289857 caacgtcgacaccgaccagatcatccc 2289883
>gb|AE005694.1| Caulobacter crescentus CB15 section 20 of 359 of the complete genome Length = 14034 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Minus Query: 133 atcgacaccgaccagatcatccc 155 ||||||||||||||||||||||| Sbjct: 2181 atcgacaccgaccagatcatccc 2159
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.073 Identities = 26/27 (96%) Strand = Plus / Minus Query: 129 caacatcgacaccgaccagatcatccc 155 |||| |||||||||||||||||||||| Sbjct: 3291507 caacgtcgacaccgaccagatcatccc 3291481 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tcggctccttcgccttcgtg 225 |||||||||||||||||||| Sbjct: 7640186 tcggctccttcgccttcgtg 7640205 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 cgccgtcatcatcggcggcgccaacttc 314 ||||||| |||||||||||| ||||||| Sbjct: 3225108 cgccgtcgtcatcggcggcggcaacttc 3225081
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.073 Identities = 26/27 (96%) Strand = Plus / Minus Query: 134 tcgacaccgaccagatcatcccggccg 160 ||||||||||||||||||| ||||||| Sbjct: 4362026 tcgacaccgaccagatcattccggccg 4362000
>emb|X84647.1|ATLEUCD A.teichomyceticus leuC and leuD genes Length = 2982 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Plus Query: 136 gacaccgaccagatcatcccggc 158 ||||||||||||||||||||||| Sbjct: 2761 gacaccgaccagatcatcccggc 2783
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 46.1 bits (23), Expect = 0.073 Identities = 26/27 (96%) Strand = Plus / Plus Query: 129 caacatcgacaccgaccagatcatccc 155 |||| |||||||||||||||||||||| Sbjct: 2252147 caacgtcgacaccgaccagatcatccc 2252173
>gb|AE010411.1| Methanopyrus kandleri AV19 section 110 of 157 of the complete genome Length = 12333 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 134 tcgacaccgaccagatcatccc 155 |||||||||||||||||||||| Sbjct: 10333 tcgacaccgaccagatcatccc 10312
>ref|XM_323737.1| Neurospora crassa OR74A hypothetical protein (NCU04385.1) partial mRNA Length = 2340 Score = 44.1 bits (22), Expect = 0.29 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 303 ggcgccaacttcggatgcggctcctc-cgcgagcacgc 339 ||||||||||| || ||||||||||| ||||||||||| Sbjct: 1843 ggcgccaactttggctgcggctcctcgcgcgagcacgc 1880
>ref|XM_952369.1| Neurospora crassa OR74A hypothetical protein (NCU04385.1) partial mRNA Length = 2340 Score = 44.1 bits (22), Expect = 0.29 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 303 ggcgccaacttcggatgcggctcctc-cgcgagcacgc 339 ||||||||||| || ||||||||||| ||||||||||| Sbjct: 1843 ggcgccaactttggctgcggctcctcgcgcgagcacgc 1880
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 134 tcgacaccgaccagatcatccc 155 |||||||||||||||||||||| Sbjct: 2300123 tcgacaccgaccagatcatccc 2300144
>gb|AY371492.1| Rhizobium leguminosarum strain 3841 lipid A 1-phosphatase (lpxE) gene, complete cds Length = 6800 Score = 44.1 bits (22), Expect = 0.29 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Minus Query: 302 cggcgccaacttcggatgcggctcctc-cgcgagcacgcgcc 342 ||||| ||| ||||| ||||||||||| |||||||||||||| Sbjct: 6134 cggcgacaatttcggctgcggctcctcgcgcgagcacgcgcc 6093
>emb|BX908809.1| Neurospora crassa DNA linkage group IV Cosmid contig 29E8 Length = 197698 Score = 44.1 bits (22), Expect = 0.29 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 303 ggcgccaacttcggatgcggctcctc-cgcgagcacgc 339 ||||||||||| || ||||||||||| ||||||||||| Sbjct: 84117 ggcgccaactttggctgcggctcctcgcgcgagcacgc 84080
>gb|AF416776.1| Methylobacterium extorquens strain AM1 GTPase/ATPase (meaB), putative isopropylmalate dehydratase (leuD), tryptophanyl-tRNA synthetase (trpS), and ArsR-type transcriptional regulator genes, complete cds; and unknown genes Length = 8217 Score = 44.1 bits (22), Expect = 0.29 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Minus Query: 302 cggcgccaacttcggatgcggctcctc-cgcgagcacgcgcc 342 ||||| ||| ||||| ||||||||||| |||||||||||||| Sbjct: 5977 cggcgacaatttcggctgcggctcctcgcgcgagcacgcgcc 5936
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 gcccgacgagtaccgcaagct 206 ||||||||||||||||||||| Sbjct: 1029557 gcccgacgagtaccgcaagct 1029577
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 136 gacaccgaccagatcatcccggccg 160 |||||||||||||||||||| |||| Sbjct: 730323 gacaccgaccagatcatccccgccg 730347
>emb|BX927151.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 4/10 Length = 349459 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 136 gacaccgaccagatcatcccggccg 160 |||||||||||||||||||| |||| Sbjct: 337143 gacaccgaccagatcatcccagccg 337167
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 cgaccagatcatcccggccga 161 ||||||||||||||||||||| Sbjct: 79148 cgaccagatcatcccggccga 79128
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 136 gacaccgaccagatcatcccggccg 160 |||||||||||||||||||| |||| Sbjct: 1381959 gacaccgaccagatcatcccagccg 1381983
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 136 gacaccgaccagatcatcccggccg 160 |||||||||||||||||||| |||| Sbjct: 1497859 gacaccgaccagatcatccccgccg 1497883
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 cgcggccgccgccacgggcgactcg 84 |||||||||||||||||||| |||| Sbjct: 975752 cgcggccgccgccacgggcggctcg 975776
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 134 tcgacaccgaccagatcatcccggc 158 ||||||||||||||||||| ||||| Sbjct: 3365765 tcgacaccgaccagatcattccggc 3365741 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 122 ttggggacaacatcgacaccgaccagatc 150 ||||||||||| ||||||||||| ||||| Sbjct: 1856402 ttggggacaacctcgacaccgacaagatc 1856374
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 131 acatcgacaccgaccagatcatccc 155 ||||||||||||||||||| ||||| Sbjct: 1065698 acatcgacaccgaccagataatccc 1065674
>gb|L12237.1|MSG8318K Mycobacterium avium (clone Mavc83) DNA sequence encoding an 18 kDa protein Length = 610 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 122 ttggggacaacatcgacaccgaccagatc 150 ||||||||||| ||||||||||| ||||| Sbjct: 466 ttggggacaacctcgacaccgacaagatc 494
>ref|NM_115761.3| Arabidopsis thaliana hydro-lyase AT3G58990 mRNA, complete cds Length = 1246 Score = 40.1 bits (20), Expect = 4.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 127 gacaacatcgacaccgaccagatcatcccggccgag 162 ||||||||||||||||| || || ||||| |||||| Sbjct: 262 gacaacatcgacaccgatcaaataatccccgccgag 297
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 caacatcgacaccgaccagatcat 152 |||| ||||||||||||||||||| Sbjct: 2159602 caacgtcgacaccgaccagatcat 2159625
>gb|AC148878.2| Chlamydomonas reinhardtii clone cr-29B2, complete sequence Length = 64153 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 ccgcccctcgccaccccgccaccg 25 ||||||||| |||||||||||||| Sbjct: 30142 ccgcccctccccaccccgccaccg 30165
>gb|AY142548.1| Arabidopsis thaliana clone RAFL06-86-A12 (R11869) mRNA sequence Length = 2042 Score = 40.1 bits (20), Expect = 4.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 127 gacaacatcgacaccgaccagatcatcccggccgag 162 ||||||||||||||||| || || ||||| |||||| Sbjct: 262 gacaacatcgacaccgatcaaataatccccgccgag 297
>gb|AY065366.1| Arabidopsis thaliana putative 3-isopropylmalate dehydratase protein small subunit (At3g58990) mRNA, complete cds Length = 975 Score = 40.1 bits (20), Expect = 4.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 127 gacaacatcgacaccgaccagatcatcccggccgag 162 ||||||||||||||||| || || ||||| |||||| Sbjct: 260 gacaacatcgacaccgatcaaataatccccgccgag 295
>emb|BX294156.1| Pirellula sp. strain 1 complete genome; segment 24/24 Length = 179576 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cggcgagtgcttcgtcgttg 124 |||||||||||||||||||| Sbjct: 152030 cggcgagtgcttcgtcgttg 152049
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 cttcgccttcgtgggcctcccctc 236 |||||||||||||||| ||||||| Sbjct: 225471 cttcgccttcgtgggcttcccctc 225448
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccgcggccgccgccacgggc 78 |||||||||||||||||||| Sbjct: 145041 ccgcggccgccgccacgggc 145022
>emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome 3, BAC clone F17J16 Length = 89517 Score = 40.1 bits (20), Expect = 4.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 127 gacaacatcgacaccgaccagatcatcccggccgag 162 ||||||||||||||||| || || ||||| |||||| Sbjct: 11273 gacaacatcgacaccgatcaaataatccccgccgag 11238
>gb|BT006060.1| Arabidopsis thaliana clone U11661 putative 3-isopropylmalate dehydratase small subunit (At3g58990) mRNA, complete cds Length = 793 Score = 40.1 bits (20), Expect = 4.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 127 gacaacatcgacaccgaccagatcatcccggccgag 162 ||||||||||||||||| || || ||||| |||||| Sbjct: 244 gacaacatcgacaccgatcaaataatccccgccgag 279
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ctcgctgagatgccaccgct 46 |||||||||||||||||||| Sbjct: 20769671 ctcgctgagatgccaccgct 20769652
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ctcgctgagatgccaccgct 46 |||||||||||||||||||| Sbjct: 44700 ctcgctgagatgccaccgct 44681
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 caacatcgacaccgaccagatcat 152 |||| ||||||||||||||||||| Sbjct: 1719182 caacgtcgacaccgaccagatcat 1719205
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 ggccgccgccacgggcgact 82 |||||||||||||||||||| Sbjct: 30229 ggccgccgccacgggcgact 30248
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccgcggccgccgccacgggc 78 |||||||||||||||||||| Sbjct: 91678 ccgcggccgccgccacgggc 91697
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gacaccgaccagatcatccc 155 |||||||||||||||||||| Sbjct: 2257995 gacaccgaccagatcatccc 2257976
>gb|M66060.1|AFAACOXABC A.eutrophus protein X (acoX), acetoin:DCPIP oxidoreductase-alpha (acoA), acetoin:DCPIP oxidoreductase-beta (acoB), FMP (acoC), and ORF 7 genes, complete cds, and ORF 8, 5' end Length = 5279 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 gaccagatcatcccggccgagcac 165 ||||||||||||||||||| |||| Sbjct: 4297 gaccagatcatcccggccgcgcac 4320 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,572,793 Number of Sequences: 3902068 Number of extensions: 1572793 Number of successful extensions: 39602 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 37373 Number of HSP's gapped (non-prelim): 2191 length of query: 342 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 320 effective length of database: 17,147,199,772 effective search space: 5487103927040 effective search space used: 5487103927040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
