>PQQE_METCA (Q608P0) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone|
           biosynthesis protein E)
          Length = 373

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
 Frame = +3

Query: 144 KVLMLCGDYMEDYEAA------VPFYALAGLGVAVHCAAPGKAPGDPCPTAVHDFLGYDL 305
           K+  +  DY ED   A        F  +A  G+A+ C A  + PG  CP +V DF   ++
Sbjct: 226 KIYYVVPDYYEDRPKACMNGWGTTFLTIAPDGMALPCHAARELPGLNCP-SVRDFSIREI 284

Query: 306 YTELPG-HRFR 335
           + E    +RFR
Sbjct: 285 WYESAAFNRFR 295

>DLGP4_RAT (P97839) Disks large-associated protein 4 (DAP-4)|
           (SAP90/PSD-95-associated protein 4) (SAPAP4)
           (PSD-95/SAP90-binding protein 4)
          Length = 992

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 30/111 (27%), Positives = 40/111 (36%), Gaps = 13/111 (11%)
 Frame = +3

Query: 33  SETKSSCFASLCSDRSYAGTNSASRLRAG----PRAMAPSKKVLMLCGDY-----MEDYE 185
           SE  S    S  SD   + T   S  R G    P A  P  K   L  ++      E + 
Sbjct: 597 SEVTSQSGLSNSSDSLDSSTRPPSVTRGGITPGPEAPEPPPKHAALKSEHGTLTSSESHS 656

Query: 186 AAVPFYALAGLGVAVHCAAPGKAPGDPCPTAVHDFLGY----DLYTELPGH 326
            AVP   L+ +G+ V C  P     +P P      +G     D  +  P H
Sbjct: 657 EAVPKRKLSSIGIQVDCIQP-VPKEEPSPATKFQSIGVQVEDDWRSSAPSH 706

>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2) (Clk4-associating SR-related
           protein)
          Length = 653

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 21/64 (32%), Positives = 29/64 (45%)
 Frame = +3

Query: 75  RSYAGTNSASRLRAGPRAMAPSKKVLMLCGDYMEDYEAAVPFYALAGLGVAVHCAAPGKA 254
           RS + ++S SR R+   +    +K+  +      D EAA    A A  G     AAPGK 
Sbjct: 287 RSPSESSSESRSRSRSPSPGREEKITFITSFGGSDEEAAAAAAAAAASG-----AAPGKP 341

Query: 255 PGDP 266
           P  P
Sbjct: 342 PAPP 345

>ATKA_METCA (Q605R1) Potassium-transporting ATPase A chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase A chain) (ATP
           phosphohydrolase [potassium-transporting] A chain)
           (Potassium-binding and translocating subunit A)
          Length = 595

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 24/81 (29%), Positives = 34/81 (41%)
 Frame = +3

Query: 54  FASLCSDRSYAGTNSASRLRAGPRAMAPSKKVLMLCGDYMEDYEAAVPFYALAGLGVAVH 233
           F+ +    S AG N+ S   AG  A  P   +++    +   Y  AVP  A+AG   A +
Sbjct: 486 FSEILYAFSSAGNNNGSAF-AGLAANTPFYNLMLGLAMWFSRYWLAVPVLAIAGALAAKN 544

Query: 234 CAAPGKAPGDPCPTAVHDFLG 296
              PG       PT    F+G
Sbjct: 545 YVPPG---AGTLPTHTPMFVG 562

>HBE_MICMU (Q28496) Hemoglobin epsilon subunit (Hemoglobin epsilon chain)|
           (Epsilon-globin)
          Length = 146

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 78  SYAGTNSASRLRAGPRAMAPSKKVLMLCGDYMEDYEAAVPFYA 206
           S+   +SAS +   P+  A  KKVL   G+ +++ +   P +A
Sbjct: 44  SFGNLSSASAIMGNPKVKAHGKKVLTSFGEAVKNLDNLKPAFA 86

>TCF7_MOUSE (Q00417) Transcription factor 7 (T-cell-specific transcription|
           factor 1) (TCF-1) (T-cell factor 1)
          Length = 419

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +3

Query: 195 PFYALA-GLGVAVHCAAPGKAPGDPCPTAVHDFLGYDLYTELPGH 326
           P Y L+   G   H  AP  APG P P   H  L   L + +PGH
Sbjct: 220 PLYPLSPSCGYRQHFPAPTAAPGAPYPRFTHPSL--MLGSGVPGH 262


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.134    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,129,605
Number of Sequences: 219361
Number of extensions: 583964
Number of successful extensions: 2168
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2164
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)