ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast69g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MCPA_CAUCR (Q00986) Chemoreceptor mcpA (Methyl-accepting chemota... 29 3.8
2QUEF_XANOR (Q5GV34) 7-cyano-7-deazaguanine reductase (EC 1.7.1.-) 28 6.4

>MCPA_CAUCR (Q00986) Chemoreceptor mcpA (Methyl-accepting chemotaxis protein)|
          Length = 657

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -2

Query: 190 TSAAASD*SSWVRRTALGGPWSSEVVSRTR 101
           T+AA  + ++ VRRTA G   +S+VVS TR
Sbjct: 386 TAAALDELTATVRRTAAGARQASDVVSTTR 415



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>QUEF_XANOR (Q5GV34) 7-cyano-7-deazaguanine reductase (EC 1.7.1.-)|
          Length = 271

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = +3

Query: 96  SCRVLETTSDDQGPPNAVLLTQDDQSDAAAEVTLPALL 209
           S   L+ + DD GPPNA  LT   Q     EV   ALL
Sbjct: 137 SIDALDVSIDDYGPPNAAYLTAQAQ-PVVEEVLTSALL 173


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,587,524
Number of Sequences: 219361
Number of extensions: 275414
Number of successful extensions: 631
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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