| Clone Name | bast69g06 |
|---|---|
| Clone Library Name | barley_pub |
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 108 bits (270), Expect = 5e-24 Identities = 50/86 (58%), Positives = 61/86 (70%), Gaps = 1/86 (1%) Frame = +3 Query: 162 PSLLAPSSRSGRSGLPFCAYATT-SGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDPLGLA 338 PS L+ + + +P AT R +MSA+W PGQPRP++LDGS+PGDFGFD LGL Sbjct: 16 PSFLSSTKSKFAAAMPVYVGATNFMSRFSMSADWMPGQPRPSYLDGSAPGDFGFDSLGLG 75 Query: 339 TVPENFERFKESEIYHCRWAMLCVPG 416 VP N ER+KESE+ HCRWAML VPG Sbjct: 76 EVPANLERYKESELIHCRWAMLAVPG 101 Score = 31.6 bits (70), Expect = 0.78 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +3 Query: 318 FDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 FDPLG + P FE K EI + R A+L + G Sbjct: 173 FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVG 205
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 73.9 bits (180), Expect = 1e-13 Identities = 32/53 (60%), Positives = 38/53 (71%) Frame = +3 Query: 258 WFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 WFPG P LDGS PGDFGFDPLGLA+ PE+ +++E+ HCRWAML G Sbjct: 68 WFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAG 120
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 68.2 bits (165), Expect = 7e-12 Identities = 30/53 (56%), Positives = 36/53 (67%) Frame = +3 Query: 258 WFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 WFPG P LDGS PGDFGFDPLGL + PE+ + ++E+ H RWAML G Sbjct: 68 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAG 120
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 63.2 bits (152), Expect = 2e-10 Identities = 30/70 (42%), Positives = 39/70 (55%) Frame = +3 Query: 207 PFCAYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYH 386 P +ATT + WFPG PAHL G P D GFDPL +A P + R + SE++H Sbjct: 148 PVAMFATTGHK---DGVWFPGAQPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFH 204 Query: 387 CRWAMLCVPG 416 R +ML + G Sbjct: 205 ARLSMLAIVG 214
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 63.2 bits (152), Expect = 2e-10 Identities = 30/54 (55%), Positives = 36/54 (66%) Frame = +3 Query: 255 EWFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 EW PG P +L GS GD GFDPLGLA PEN + F ++E+ + RWAML V G Sbjct: 56 EWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAG 109
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 60.8 bits (146), Expect = 1e-09 Identities = 26/48 (54%), Positives = 35/48 (72%) Frame = +3 Query: 261 FPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 F G+P P++L G PGD+G+D GL+ PENF + +E E+ HCRWAML Sbjct: 70 FSGEP-PSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAML 116 Score = 32.3 bits (72), Expect = 0.45 Identities = 22/50 (44%), Positives = 24/50 (48%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P D PG FDPLGLA PE F K EI + R AM + G Sbjct: 187 GGPLGEVTDPIYPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 235
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 60.1 bits (144), Expect = 2e-09 Identities = 29/67 (43%), Positives = 38/67 (56%) Frame = +3 Query: 216 AYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRW 395 A +SG WFP P +L G + GD GFDP GLA P FER + +E++HCR Sbjct: 360 AMFASSGAKEERELWFPNIVPPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRL 419 Query: 396 AMLCVPG 416 +ML + G Sbjct: 420 SMLALVG 426 Score = 60.1 bits (144), Expect = 2e-09 Identities = 28/53 (52%), Positives = 34/53 (64%) Frame = +3 Query: 258 WFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 WFP P+ L+G GD GFDP GLA P+ FER + +E+YH R AML V G Sbjct: 5 WFPNTLAPSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVG 57 Score = 57.8 bits (138), Expect = 1e-08 Identities = 26/53 (49%), Positives = 32/53 (60%) Frame = +3 Query: 258 WFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 WFP PA L G P D GFDPL LA P+ + R + +E++H R AMLC G Sbjct: 190 WFPNAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVG 242
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 59.7 bits (143), Expect = 3e-09 Identities = 26/48 (54%), Positives = 34/48 (70%) Frame = +3 Query: 261 FPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 F G+P P++L G PGD+G+D GL+ PE F R +E E+ HCRWAML Sbjct: 61 FSGEP-PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAML 107 Score = 33.9 bits (76), Expect = 0.16 Identities = 18/33 (54%), Positives = 20/33 (60%) Frame = +3 Query: 318 FDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 FDPLGLAT PE F K EI + R AM + G Sbjct: 195 FDPLGLATDPEAFAELKVKEIKNGRLAMFSMFG 227
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 58.9 bits (141), Expect = 5e-09 Identities = 27/46 (58%), Positives = 32/46 (69%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 P LDGS PGDFGFDPLGL P + ++E+E+ H RWAML V G Sbjct: 73 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLG 118 Score = 31.6 bits (70), Expect = 0.78 Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 15/71 (21%) Frame = +3 Query: 243 TMSAEWFPGQPRPAHLDGSSPGDFG------FDPLGLATVPEN---------FERFKESE 377 + S EW R A +S G+ G FDPL LA N ER K +E Sbjct: 172 SQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAE 231 Query: 378 IYHCRWAMLCV 410 I H R AML + Sbjct: 232 IKHARLAMLAM 242
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 57.4 bits (137), Expect = 1e-08 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 11/89 (12%) Frame = +3 Query: 171 LAPSSRSGRSGLPFCAYATTSGRVTMSAEW-----------FPGQPRPAHLDGSSPGDFG 317 L+P++ + F T S V+ + W F G+P P++L G PGD+G Sbjct: 10 LSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEP-PSYLTGEFPGDYG 68 Query: 318 FDPLGLATVPENFERFKESEIYHCRWAML 404 +D GL+ PE F + +E E+ H RWAML Sbjct: 69 WDTAGLSADPETFAKNRELEVIHSRWAML 97 Score = 31.6 bits (70), Expect = 0.78 Identities = 21/50 (42%), Positives = 24/50 (48%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P D PG FDPLGLA PE F K E+ + R AM + G Sbjct: 168 GGPLGEVTDPIYPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 216
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 57.4 bits (137), Expect = 1e-08 Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 11/72 (15%) Frame = +3 Query: 222 ATTSGRVTMSAEWF-----------PGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFK 368 A + +V+ S+ W+ G+P P++L G PGD+G+D GL+ PE F + + Sbjct: 38 AAKAKQVSSSSPWYGSDRVLYLGPLSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNR 96 Query: 369 ESEIYHCRWAML 404 E E+ HCRWAML Sbjct: 97 ELEVIHCRWAML 108 Score = 32.0 bits (71), Expect = 0.59 Identities = 21/50 (42%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA P+ F K EI + R AM + G Sbjct: 179 GGPLGEIVDPLYPGG-SFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFG 227
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 57.4 bits (137), Expect = 1e-08 Identities = 29/72 (40%), Positives = 36/72 (50%), Gaps = 6/72 (8%) Frame = +3 Query: 219 YATTSGRVTMSAEWFPGQPR------PAHLDGSSPGDFGFDPLGLATVPENFERFKESEI 380 + + V W P P LDGS PGDFGFDPLGL P + ++E+E+ Sbjct: 42 FVVAAAAVAPKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 101 Query: 381 YHCRWAMLCVPG 416 H RWAM V G Sbjct: 102 IHGRWAMAAVLG 113 Score = 29.3 bits (64), Expect = 3.8 Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 9/45 (20%) Frame = +3 Query: 303 PGDFGFDPLGLAT-------VP--ENFERFKESEIYHCRWAMLCV 410 PG FDPL LA VP E ER K +EI H R AML + Sbjct: 193 PGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAM 237
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 57.4 bits (137), Expect = 1e-08 Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 12/98 (12%) Frame = +3 Query: 147 SAVGVPSLLAPSSR--SGRSGLPFCAYATTSGRVTMSAEWF-PGQPR---------PAHL 290 S G L+PSS +G + A+ + V+ S+ W+ P + + P++L Sbjct: 12 SFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYL 71 Query: 291 DGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 G PGD+G+D GL+ PE F + +E E+ HCRWAML Sbjct: 72 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 109 Score = 34.7 bits (78), Expect = 0.092 Identities = 22/50 (44%), Positives = 26/50 (52%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G+P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 180 GEPLGEVVDPLYPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 228
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 57.0 bits (136), Expect = 2e-08 Identities = 23/42 (54%), Positives = 31/42 (73%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 PA+L G PGD+G+D GL+ PE F+R++E E+ H RWAML Sbjct: 54 PAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 95 Score = 33.5 bits (75), Expect = 0.20 Identities = 21/50 (42%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P LD PG+ FDPLGLA P+ F K EI + R A + G Sbjct: 166 GGPAGEGLDPLYPGE-SFDPLGLADDPDTFAELKVKEIKNGRLASFSMFG 214
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 56.6 bits (135), Expect = 2e-08 Identities = 23/42 (54%), Positives = 30/42 (71%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F R +E E+ HCRWAML Sbjct: 38 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAML 79 Score = 34.7 bits (78), Expect = 0.092 Identities = 23/50 (46%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P LD PG FDPLGLA PE F K EI + R AM + G Sbjct: 150 GGPLGEGLDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 198
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 56.6 bits (135), Expect = 2e-08 Identities = 23/42 (54%), Positives = 30/42 (71%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F R +E E+ HCRWAML Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAML 107 Score = 34.7 bits (78), Expect = 0.092 Identities = 23/50 (46%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P LD PG FDPLGLA PE F K EI + R AM + G Sbjct: 178 GGPLGEGLDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 56.6 bits (135), Expect = 2e-08 Identities = 23/42 (54%), Positives = 30/42 (71%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F R +E E+ HCRWAML Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAML 107 Score = 34.7 bits (78), Expect = 0.092 Identities = 23/50 (46%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P LD PG FDPLGLA PE F K EI + R AM + G Sbjct: 178 GGPLGEGLDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 56.6 bits (135), Expect = 2e-08 Identities = 23/42 (54%), Positives = 30/42 (71%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F R +E E+ HCRWAML Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAML 107 Score = 34.7 bits (78), Expect = 0.092 Identities = 23/50 (46%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P LD PG FDPLGLA PE F K EI + R AM + G Sbjct: 178 GGPLGEGLDKIYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 56.6 bits (135), Expect = 2e-08 Identities = 24/46 (52%), Positives = 33/46 (71%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 G+P P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML Sbjct: 63 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 107 Score = 32.7 bits (73), Expect = 0.35 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K E+ R AML + G Sbjct: 178 GGPLGEVVDPLYPGG-SFDPLGLADDPEAFGELKVKELKKGRLAMLSMFG 226
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 56.2 bits (134), Expect = 3e-08 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 11/72 (15%) Frame = +3 Query: 222 ATTSGRVTMSAEWFPGQPR-----------PAHLDGSSPGDFGFDPLGLATVPENFERFK 368 A T+GR+TM + + G R P++L+G PGD+G+D GL+ PE F R + Sbjct: 37 AATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNR 96 Query: 369 ESEIYHCRWAML 404 E+ H RWAML Sbjct: 97 ALEVIHGRWAML 108 Score = 32.0 bits (71), Expect = 0.59 Identities = 18/38 (47%), Positives = 20/38 (52%) Frame = +3 Query: 303 PGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 PG FDPLGLA P F K EI + R AM + G Sbjct: 192 PGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFG 229
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 55.8 bits (133), Expect = 4e-08 Identities = 25/46 (54%), Positives = 31/46 (67%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 P LDGS PGD+GFDPLGL P + ++E+E+ H RWAM V G Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113 Score = 30.0 bits (66), Expect = 2.3 Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 9/45 (20%) Frame = +3 Query: 303 PGDFGFDPLGLAT-------VP--ENFERFKESEIYHCRWAMLCV 410 PG FDPL LA VP E ER K +EI H R AML + Sbjct: 193 PGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAM 237
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 55.8 bits (133), Expect = 4e-08 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 13/99 (13%) Frame = +3 Query: 147 SAVGVPSLLAPSSR--SGRSGLPFCAYATTSGRVTMSAEWFPGQPR-----------PAH 287 S G L+PSS +G + A+ + V+ + W+ G R P++ Sbjct: 12 SFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWY-GPDRVKYLGPFSGESPSY 70 Query: 288 LDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 L G PGD+G+D GL+ PE F + +E E+ HCRWAML Sbjct: 71 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 109 Score = 33.1 bits (74), Expect = 0.27 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 180 GGPLGEVVDPLYPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 228
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 55.8 bits (133), Expect = 4e-08 Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 13/91 (14%) Frame = +3 Query: 171 LAPSSR--SGRSGLPFCAYATTSGRVTMSAEWFPGQPR-----------PAHLDGSSPGD 311 L+PSS +G AT + V+ + W+ G R P++L G PGD Sbjct: 20 LSPSSSEITGNGKATMRKTATKAKPVSSGSPWY-GPDRVKYLGPFSGEAPSYLTGEFPGD 78 Query: 312 FGFDPLGLATVPENFERFKESEIYHCRWAML 404 +G+D GL+ PE F + +E E+ HCRWAML Sbjct: 79 YGWDTAGLSADPETFAKNRELEVIHCRWAML 109 Score = 31.6 bits (70), Expect = 0.78 Identities = 21/50 (42%), Positives = 24/50 (48%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K E + R AM + G Sbjct: 180 GGPLGVVVDPLYPGG-SFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFG 228
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 55.8 bits (133), Expect = 4e-08 Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 18/79 (22%) Frame = +3 Query: 222 ATTSGRVTM--------SAEWF-PGQPR---------PAHLDGSSPGDFGFDPLGLATVP 347 A GRV+M ++ W+ P +P+ P++L G PGD+G+D GL+ P Sbjct: 29 AVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADP 88 Query: 348 ENFERFKESEIYHCRWAML 404 E F + +E E+ HCRWAML Sbjct: 89 ETFAKNRELEVIHCRWAML 107 Score = 33.5 bits (75), Expect = 0.20 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P LD PG FDPLGLA P+ F K EI + R AM + G Sbjct: 178 GGPLGEGLDPIYPGG-AFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFG 226
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 55.5 bits (132), Expect = 5e-08 Identities = 22/42 (52%), Positives = 30/42 (71%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 108 Score = 34.7 bits (78), Expect = 0.092 Identities = 22/50 (44%), Positives = 26/50 (52%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G+P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 179 GEPLGEVVDPLYPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 227
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 55.5 bits (132), Expect = 5e-08 Identities = 22/42 (52%), Positives = 30/42 (71%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 108 Score = 33.5 bits (75), Expect = 0.20 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 179 GGPLGEVIDPLYPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 227
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 55.5 bits (132), Expect = 5e-08 Identities = 22/42 (52%), Positives = 30/42 (71%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 108 Score = 33.1 bits (74), Expect = 0.27 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 179 GGPLGEVVDPLYPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 227
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 55.5 bits (132), Expect = 5e-08 Identities = 22/42 (52%), Positives = 30/42 (71%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 109 Score = 33.1 bits (74), Expect = 0.27 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 180 GGPLGEVVDPLYPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 228
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 55.5 bits (132), Expect = 5e-08 Identities = 22/42 (52%), Positives = 30/42 (71%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 109 Score = 33.1 bits (74), Expect = 0.27 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 180 GGPLGEVVDPLYPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 228
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 55.5 bits (132), Expect = 5e-08 Identities = 22/42 (52%), Positives = 30/42 (71%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 109 Score = 32.3 bits (72), Expect = 0.45 Identities = 22/50 (44%), Positives = 24/50 (48%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P D PG FDPLGLA PE F K EI + R AM + G Sbjct: 180 GGPLGEVTDPLYPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 228
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 55.5 bits (132), Expect = 5e-08 Identities = 22/42 (52%), Positives = 30/42 (71%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 109 Score = 31.2 bits (69), Expect = 1.0 Identities = 21/50 (42%), Positives = 24/50 (48%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K I + R AM + G Sbjct: 180 GGPLGEVVDPLYPGG-SFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFG 228
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 55.5 bits (132), Expect = 5e-08 Identities = 22/42 (52%), Positives = 30/42 (71%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 106
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 55.5 bits (132), Expect = 5e-08 Identities = 22/42 (52%), Positives = 30/42 (71%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 107 Score = 33.1 bits (74), Expect = 0.27 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 178 GGPLGEVVDPLYPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 226
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 55.5 bits (132), Expect = 5e-08 Identities = 22/42 (52%), Positives = 30/42 (71%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 107 Score = 33.1 bits (74), Expect = 0.27 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 178 GGPLGEVVDPLYPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 226
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 55.1 bits (131), Expect = 7e-08 Identities = 21/42 (50%), Positives = 31/42 (73%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 PA+L G PGD+G+D GL+ PE F++++E E+ H RWA+L Sbjct: 56 PAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALL 97 Score = 35.0 bits (79), Expect = 0.070 Identities = 21/45 (46%), Positives = 24/45 (53%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAM 401 G P LD PG+ FDPLGLA P+ F K EI + R AM Sbjct: 169 GGPAGEGLDPLYPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAM 212
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 55.1 bits (131), Expect = 7e-08 Identities = 22/46 (47%), Positives = 30/46 (65%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 P +L+G GD+G+DP GL PENF +++ E+ H RWAML G Sbjct: 82 PEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAG 127 Score = 28.9 bits (63), Expect = 5.0 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +3 Query: 318 FDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 FDPLGLA PE K EI + R AM + G Sbjct: 206 FDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLG 238
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 54.7 bits (130), Expect = 9e-08 Identities = 24/48 (50%), Positives = 33/48 (68%) Frame = +3 Query: 261 FPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 F G+P P++L G PGD+G+D GL+ PE F + +E E+ H RWAML Sbjct: 58 FSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 104 Score = 32.3 bits (72), Expect = 0.45 Identities = 21/50 (42%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K E+ + R AM + G Sbjct: 175 GGPLGEVVDPLYPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 223
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 54.7 bits (130), Expect = 9e-08 Identities = 24/48 (50%), Positives = 33/48 (68%) Frame = +3 Query: 261 FPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 F G+P P++L G PGD+G+D GL+ PE F + +E E+ H RWAML Sbjct: 74 FSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 120 Score = 30.0 bits (66), Expect = 2.3 Identities = 21/50 (42%), Positives = 24/50 (48%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P D PG FDPLGLA P+ F K EI + R AM + G Sbjct: 191 GGPLGEVTDPIYPGG-NFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFG 239
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 54.7 bits (130), Expect = 9e-08 Identities = 24/48 (50%), Positives = 33/48 (68%) Frame = +3 Query: 261 FPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 F G+P P++L G PGD+G+D GL+ PE F + +E E+ H RWAML Sbjct: 74 FSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 120 Score = 31.2 bits (69), Expect = 1.0 Identities = 21/50 (42%), Positives = 24/50 (48%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P D PG FDPLGLA P+ F K EI + R AM + G Sbjct: 191 GGPLGEVTDPIYPGG-NFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFG 239
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 54.7 bits (130), Expect = 9e-08 Identities = 24/48 (50%), Positives = 33/48 (68%) Frame = +3 Query: 261 FPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 F G+P P++L G PGD+G+D GL+ PE F + +E E+ H RWAML Sbjct: 41 FSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 87
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 54.7 bits (130), Expect = 9e-08 Identities = 24/48 (50%), Positives = 33/48 (68%) Frame = +3 Query: 261 FPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 F G+P P++L G PGD+G+D GL+ PE F + +E E+ H RWAML Sbjct: 59 FSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 105 Score = 31.6 bits (70), Expect = 0.78 Identities = 21/50 (42%), Positives = 24/50 (48%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P D PG FDPLGLA PE F K E+ + R AM + G Sbjct: 176 GGPLGEVTDPIYPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 224
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 54.3 bits (129), Expect = 1e-07 Identities = 24/48 (50%), Positives = 32/48 (66%) Frame = +3 Query: 261 FPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 F G P P++L G PGD+G+D GL+ PE F + +E E+ H RWAML Sbjct: 61 FSGSP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 107 Score = 30.8 bits (68), Expect = 1.3 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = +3 Query: 318 FDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 FDPLGLA PE F K E+ + R AM + G Sbjct: 194 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 226
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 53.5 bits (127), Expect = 2e-07 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 18/77 (23%) Frame = +3 Query: 228 TSGRVTM--------SAEWF-PGQPR---------PAHLDGSSPGDFGFDPLGLATVPEN 353 + GR+TM + W+ P +P+ P++L G PGD+G+D GL+ PE Sbjct: 29 SGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 88 Query: 354 FERFKESEIYHCRWAML 404 F R +E E+ H RWAML Sbjct: 89 FARNRELEVIHSRWAML 105 Score = 33.5 bits (75), Expect = 0.20 Identities = 21/50 (42%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P LD PG FDPLGLA P+ F K E+ + R AM + G Sbjct: 176 GGPLGEGLDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFG 224
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 53.1 bits (126), Expect = 2e-07 Identities = 21/42 (50%), Positives = 29/42 (69%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G P D+G+D GL+ PE F + +E E+ HCRWAML Sbjct: 68 PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAML 109 Score = 33.5 bits (75), Expect = 0.20 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 180 GGPLGEVIDPLYPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 228
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 52.8 bits (125), Expect = 3e-07 Identities = 22/42 (52%), Positives = 29/42 (69%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F R +E E+ H RWAML Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAML 108 Score = 33.1 bits (74), Expect = 0.27 Identities = 17/33 (51%), Positives = 20/33 (60%) Frame = +3 Query: 318 FDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 FDPLGLAT PE F K E+ + R AM + G Sbjct: 196 FDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 228
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 52.8 bits (125), Expect = 3e-07 Identities = 22/42 (52%), Positives = 29/42 (69%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F R +E E+ H RWAML Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAML 108 Score = 33.1 bits (74), Expect = 0.27 Identities = 17/33 (51%), Positives = 20/33 (60%) Frame = +3 Query: 318 FDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 FDPLGLAT PE F K E+ + R AM + G Sbjct: 196 FDPLGLATDPEAFAELKVKELKNGRLAMFSMFG 228
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 52.8 bits (125), Expect = 3e-07 Identities = 23/46 (50%), Positives = 32/46 (69%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 G+P P++L G PGD+G+D GL+ PE F + +E E+ H RWAML Sbjct: 59 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 103 Score = 33.1 bits (74), Expect = 0.27 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 174 GGPLGEVVDPLYPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 222
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 52.8 bits (125), Expect = 3e-07 Identities = 23/46 (50%), Positives = 32/46 (69%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 G+P P++L G PGD+G+D GL+ PE F + +E E+ H RWAML Sbjct: 63 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 107 Score = 30.4 bits (67), Expect = 1.7 Identities = 21/50 (42%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K E+ + R AM + G Sbjct: 178 GGPLGEVVDPLYPGGT-FDPLGLADDPEAFADVKVKELKNGRLAMFSMFG 226
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 52.8 bits (125), Expect = 3e-07 Identities = 22/42 (52%), Positives = 29/42 (69%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F R +E E+ H RWAML Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAML 107 Score = 33.9 bits (76), Expect = 0.16 Identities = 21/50 (42%), Positives = 26/50 (52%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P LD PG FDPLGLA P++F K E+ + R AM + G Sbjct: 178 GGPLGEGLDPLYPGG-AFDPLGLADDPDSFAELKVKELKNGRLAMFSMFG 226
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 52.8 bits (125), Expect = 3e-07 Identities = 23/46 (50%), Positives = 32/46 (69%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 G+P P++L G PGD+G+D GL+ PE F + +E E+ H RWAML Sbjct: 63 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 107 Score = 33.1 bits (74), Expect = 0.27 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 178 GGPLGEVVDPLYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 52.4 bits (124), Expect = 4e-07 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = +3 Query: 261 FPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 F P +L G PGD+G+D GL+ P+ F R++E E+ H RWA+L Sbjct: 45 FSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92 Score = 31.6 bits (70), Expect = 0.78 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 Query: 288 LDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 LD PG FDPLGLA P+ F K EI + R AM G Sbjct: 173 LDTLYPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLG 214
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 52.4 bits (124), Expect = 4e-07 Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 12/90 (13%) Frame = +3 Query: 171 LAPSSRS-GRSGLPFCAYATTSGRVTMSAEWFPGQPR-----------PAHLDGSSPGDF 314 L PSS+ G + ATT + + W+ G R P++L G PGD+ Sbjct: 23 LNPSSQELGAARFTMRKSATTKKVASSGSPWY-GPDRVKYLGPFSGESPSYLTGEFPGDY 81 Query: 315 GFDPLGLATVPENFERFKESEIYHCRWAML 404 G+D GL+ PE F + +E E+ H RWAML Sbjct: 82 GWDTAGLSADPETFSKNRELEVIHSRWAML 111 Score = 32.3 bits (72), Expect = 0.45 Identities = 21/50 (42%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K E+ + R AM + G Sbjct: 182 GGPLGEVVDPLYPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 230
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 52.4 bits (124), Expect = 4e-07 Identities = 23/48 (47%), Positives = 32/48 (66%) Frame = +3 Query: 261 FPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 F G+P P++L G PGD+G+D GL+ PE F + +E E+ H WAML Sbjct: 2 FSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAML 48 Score = 31.6 bits (70), Expect = 0.78 Identities = 21/50 (42%), Positives = 24/50 (48%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P D PG FDPLGLA PE F K E+ + R AM + G Sbjct: 119 GGPLGEVTDPIYPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 167
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 52.4 bits (124), Expect = 4e-07 Identities = 21/42 (50%), Positives = 29/42 (69%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D L+ PE F + +E E+ HCRWAML Sbjct: 68 PSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAML 109 Score = 33.1 bits (74), Expect = 0.27 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 180 GGPLGEVVDPLYPGG-SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 228
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 52.0 bits (123), Expect = 6e-07 Identities = 22/45 (48%), Positives = 31/45 (68%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAM 401 G P P++L G PGD+G+D GL+ PE F + +E E+ HCRWA+ Sbjct: 62 GSP-PSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAI 105 Score = 32.3 bits (72), Expect = 0.45 Identities = 20/46 (43%), Positives = 23/46 (50%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 P +L GS FDPLGL PE F K EI + R AM + G Sbjct: 186 PLYLGGS------FDPLGLGDDPERFAELKVKEIKNGRLAMFSMFG 225
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 52.0 bits (123), Expect = 6e-07 Identities = 21/42 (50%), Positives = 29/42 (69%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F + +E E+ H RWAML Sbjct: 69 PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAML 110 Score = 32.3 bits (72), Expect = 0.45 Identities = 21/50 (42%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K E+ + R AM + G Sbjct: 181 GGPLGEVVDPLYPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 229
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 52.0 bits (123), Expect = 6e-07 Identities = 20/42 (47%), Positives = 29/42 (69%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D ++ PE F + +E E+ HCRWAML Sbjct: 67 PSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAML 108 Score = 30.0 bits (66), Expect = 2.3 Identities = 20/43 (46%), Positives = 22/43 (51%) Frame = +3 Query: 288 LDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 LD PG FDPLGLA PE K EI + R AM + G Sbjct: 186 LDPLLPGG-AFDPLGLADDPEACAELKVKEIKNGRLAMFSMFG 227
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 51.6 bits (122), Expect = 7e-07 Identities = 21/42 (50%), Positives = 29/42 (69%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F + +E E+ H RWAML Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 106 Score = 30.0 bits (66), Expect = 2.3 Identities = 20/50 (40%), Positives = 24/50 (48%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE K E+ + R AM + G Sbjct: 177 GGPLGEIVDPLYPGG-SFDPLGLAEDPERSAELKVKELKNGRLAMFSMFG 225
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 51.6 bits (122), Expect = 7e-07 Identities = 21/42 (50%), Positives = 29/42 (69%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F + +E E+ H RWAML Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 106 Score = 34.7 bits (78), Expect = 0.092 Identities = 23/50 (46%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P LD PG FDPLGLA PE F K EI + R AM + G Sbjct: 177 GGPLGEGLDPLYPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 51.6 bits (122), Expect = 7e-07 Identities = 21/42 (50%), Positives = 29/42 (69%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F + +E E+ H RWAML Sbjct: 29 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 70 Score = 35.0 bits (79), Expect = 0.070 Identities = 22/50 (44%), Positives = 26/50 (52%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA VPE F K E+ + R AM + G Sbjct: 141 GGPLGEVVDPLYPGG-SFDPLGLAEVPEAFAELKVKELKNGRLAMFSMFG 189
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 51.2 bits (121), Expect = 9e-07 Identities = 21/42 (50%), Positives = 30/42 (71%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L+G GD+G+D GL++ PE F R +E E+ H RWAML Sbjct: 69 PSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAML 110 Score = 32.0 bits (71), Expect = 0.59 Identities = 21/50 (42%), Positives = 24/50 (48%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P D PG FDPLGLA P+ F K EI + R AM + G Sbjct: 181 GGPLGEVTDPIYPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 229
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 51.2 bits (121), Expect = 9e-07 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 24/102 (23%) Frame = +3 Query: 171 LAPSSRSGRS-GLPFCAYATTSGRVTM------------SAEWFPGQPR----------- 278 L+ SS +G++ +P + T +G+VTM + W+ G R Sbjct: 8 LSSSSFAGKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWY-GPDRVKYLGPFSGEA 66 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ P F + ++ E+ HCRW ML Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTML 108 Score = 32.0 bits (71), Expect = 0.59 Identities = 21/50 (42%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F + EI + R AM + G Sbjct: 179 GGPLGEVIDPLYPGG-SFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFG 227
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 50.8 bits (120), Expect = 1e-06 Identities = 21/42 (50%), Positives = 29/42 (69%) Frame = +3 Query: 279 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 P++L G PGD+G+D GL+ PE F + +E E+ H RWAML Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAML 106 Score = 30.0 bits (66), Expect = 2.3 Identities = 21/50 (42%), Positives = 24/50 (48%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA E F K EI + R AM + G Sbjct: 177 GGPLGEVVDPLYPGG-SFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFG 225
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 50.8 bits (120), Expect = 1e-06 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 11/72 (15%) Frame = +3 Query: 222 ATTSGRVTMSAEWFPGQPR-----------PAHLDGSSPGDFGFDPLGLATVPENFERFK 368 A S R TMS + + G R P++L+G PGD+G+D GL+ PE F + + Sbjct: 34 AMGSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNR 93 Query: 369 ESEIYHCRWAML 404 E+ H RWAML Sbjct: 94 ALEVIHGRWAML 105 Score = 32.3 bits (72), Expect = 0.45 Identities = 18/38 (47%), Positives = 20/38 (52%) Frame = +3 Query: 303 PGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 PG FDPLGLA P F K EI + R AM + G Sbjct: 189 PGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 47.4 bits (111), Expect = 1e-05 Identities = 23/56 (41%), Positives = 31/56 (55%) Frame = +3 Query: 249 SAEWFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 S EW P++L G PGD+G+D GL+ PE F + +E E+ H R AM G Sbjct: 66 SGEW------PSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALG 115
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 47.0 bits (110), Expect = 2e-05 Identities = 29/96 (30%), Positives = 34/96 (35%), Gaps = 43/96 (44%) Frame = +3 Query: 258 WFPGQPRPAHLDGSSPGDFGFDPLGLATVPE----------------------------- 350 WFPG P +LDGS GD+GFDP GL E Sbjct: 55 WFPGAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAV 114 Query: 351 --------------NFERFKESEIYHCRWAMLCVPG 416 +RF+E E+ H RWAML G Sbjct: 115 DPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLG 150 Score = 32.7 bits (73), Expect = 0.35 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Frame = +3 Query: 276 RPAHLDGSS---PGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 R A LD PG FDPLGLA+ P + + +EI H R AM+ Sbjct: 203 RNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMV 248
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 45.4 bits (106), Expect = 5e-05 Identities = 26/74 (35%), Positives = 35/74 (47%) Frame = +3 Query: 183 SRSGRSGLPFCAYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFER 362 S+S S F TSG W P G PGD+G+D GL+ PE F+R Sbjct: 48 SKSSSSANQFYGPDATSG-------WDLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKR 100 Query: 363 FKESEIYHCRWAML 404 ++E E+ H R +L Sbjct: 101 YRELELIHARCGLL 114 Score = 35.8 bits (81), Expect = 0.041 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P LD PG+ FDPLGLA P+ F K EI + R AM G Sbjct: 187 GGPAGEGLDPLYPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLG 235
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 44.7 bits (104), Expect = 9e-05 Identities = 33/100 (33%), Positives = 36/100 (36%), Gaps = 45/100 (45%) Frame = +3 Query: 252 AEWFPGQPRPAHLDGSSPGDFGFDPLGLAT--------VPEN------------------ 353 A W P RP LDGS PGD GFDPLGL+ V EN Sbjct: 50 ALWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQA 109 Query: 354 -------------------FERFKESEIYHCRWAMLCVPG 416 RF+E E+ H RWAML G Sbjct: 110 TPDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLG 149
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 44.7 bits (104), Expect = 9e-05 Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLA-TVPENFERFKESEIYHCRWAMLCVPG 416 G+ A +G PGD GFDPLGLA + P+ F +E E+ H R AM+ G Sbjct: 137 GKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAG 187
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 44.3 bits (103), Expect = 1e-04 Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 6/59 (10%) Frame = +3 Query: 258 WFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKE------SEIYHCRWAMLCVPG 416 WF + ++LDG PGDFGFDPLGL+ PE F E E+ + R+AML G Sbjct: 56 WFASKQSLSYLDGRLPGDFGFDPLGLSD-PEGTGGFIEPKWLAYGEVINGRFAMLGAAG 113
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 43.1 bits (100), Expect = 3e-04 Identities = 28/96 (29%), Positives = 33/96 (34%), Gaps = 43/96 (44%) Frame = +3 Query: 258 WFPGQPRPAHLDGSSPGDFGFDPLGLATVPE----------------------------- 350 W+PG P LDGS GD+GFDP GL E Sbjct: 58 WYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAA 117 Query: 351 --------------NFERFKESEIYHCRWAMLCVPG 416 +RF+E E+ H RWAML G Sbjct: 118 DAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLG 153 Score = 36.2 bits (82), Expect = 0.031 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = +3 Query: 276 RPAHLDGSS---PGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 R A LD PG FDPLGLA PE + + +EI H R AM+ G Sbjct: 206 RNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 41.2 bits (95), Expect = 0.001 Identities = 28/92 (30%), Positives = 31/92 (33%), Gaps = 43/92 (46%) Frame = +3 Query: 258 WFPGQPRPAHLDGSSPGDFGFDPLGLATVPE----------------------------- 350 WFPG P LDGS GD GFDP GL E Sbjct: 59 WFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESS 118 Query: 351 --------------NFERFKESEIYHCRWAML 404 +RF+E E+ H RWAML Sbjct: 119 EIKPTPFQPYTEVFGIQRFRECELIHGRWAML 150 Score = 35.4 bits (80), Expect = 0.054 Identities = 18/34 (52%), Positives = 22/34 (64%) Frame = +3 Query: 303 PGDFGFDPLGLATVPENFERFKESEIYHCRWAML 404 PG + FDPLGLA PE + K +EI H R AM+ Sbjct: 219 PGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMV 251
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 35.0 bits (79), Expect = 0.070 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +3 Query: 147 SAVGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEWFPGQPRPAHL---DGSSPGDFG 317 S G LAPS+ G+ + T+ + S + G R +L G +P Sbjct: 12 SLAGQAMKLAPSTPE--LGVGRVSMRKTAPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLT 69 Query: 318 FDPLGLATVPENFERFKESEIYHCRWAML 404 + GL+ PE F + +E E+ H RWAML Sbjct: 70 GEFHGLSADPETFAKNRELEVIHSRWAML 98 Score = 29.3 bits (64), Expect = 3.8 Identities = 20/50 (40%), Positives = 23/50 (46%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P D PG FDPLGLA PE K E+ + R AM + G Sbjct: 169 GGPLGEVTDPIYPGG-SFDPLGLADDPEALAELKVKELKNGRLAMFSMFG 217
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 33.9 bits (76), Expect = 0.16 Identities = 23/50 (46%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P LD PGD FDPLGLA PE K EI + R AM + G Sbjct: 63 GGPLGEGLDPLYPGD-AFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFG 111
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 33.1 bits (74), Expect = 0.27 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 180 GGPLGEVVDPLYPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 228
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 33.1 bits (74), Expect = 0.27 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 180 GGPLGEVVDPLYPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 228
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 33.1 bits (74), Expect = 0.27 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 29 GGPLGEVVDPLYPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 77
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 33.1 bits (74), Expect = 0.27 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 178 GGPLGEVVDPLYPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 226
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 33.1 bits (74), Expect = 0.27 Identities = 22/50 (44%), Positives = 25/50 (50%) Frame = +3 Query: 267 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPG 416 G P +D PG FDPLGLA PE F K EI + R AM + G Sbjct: 178 GGPLGEVVDPLYPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 226
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 32.3 bits (72), Expect = 0.45 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 11/46 (23%) Frame = +3 Query: 297 SSPGDFG-----------FDPLGLATVPENFERFKESEIYHCRWAM 401 ++PG FG FDPLGLA P+ F K EI + R AM Sbjct: 33 TAPGQFGEDLDRLYPGGPFDPLGLADDPDTFPELKVKEIKNGRLAM 78
>FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor (Fragment) Length = 211 Score = 31.6 bits (70), Expect = 0.78 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 2/92 (2%) Frame = +3 Query: 147 SAVGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDP 326 + P L PS+ +G + A +S + MS E + + +P F +DP Sbjct: 3 ACAAAPGLRGPSAFNGAA---LSTPAKSSSAMKMSFE--------SEIGAQAPLGF-WDP 50 Query: 327 LGLATVP--ENFERFKESEIYHCRWAMLCVPG 416 LGL E FER + E+ H R AML + G Sbjct: 51 LGLLADADQERFERLRYVEVKHGRIAMLAIAG 82
>HAM1_MYCTU (P64307) HAM1 protein homolog| Length = 204 Score = 31.2 bits (69), Expect = 1.0 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = +3 Query: 177 PSSRSGRSGLPFCAYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDPL 329 P R G + + CA + SG V + EW P + G FG+DP+ Sbjct: 117 PDERRGAAFVSACALVSGSGEVVVRGEW----PGTIAREPRGDGGFGYDPV 163
>HAM1_MYCBO (P64308) HAM1 protein homolog| Length = 204 Score = 31.2 bits (69), Expect = 1.0 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = +3 Query: 177 PSSRSGRSGLPFCAYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDPL 329 P R G + + CA + SG V + EW P + G FG+DP+ Sbjct: 117 PDERRGAAFVSACALVSGSGEVVVRGEW----PGTIAREPRGDGGFGYDPV 163
>NU3M_ASTPE (P11991) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 30.8 bits (68), Expect = 1.3 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +3 Query: 240 VTMSAEWFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERF 365 +T +A + P R + SSP + GFDPL A VP +F F Sbjct: 26 ITFAAHFLPS--RNTDSEKSSPYECGFDPLNSARVPFSFRFF 65
>NU3M_ORNAN (Q36456) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 115 Score = 30.8 bits (68), Expect = 1.3 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = +3 Query: 240 VTMSAEWFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERF 365 + M A W P +L+ SSP + GFDPLG A +P + + F Sbjct: 17 LVMVAFWLP--QLYTYLEKSSPYECGFDPLGSARLPFSMKFF 56
>SSPO_BOVIN (P98167) SCO-spondin (Fragment)| Length = 867 Score = 30.8 bits (68), Expect = 1.3 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +3 Query: 303 PGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVP 413 PGD + PLGLA +PE ++ H WA + P Sbjct: 340 PGDPCYSPLGLARLPEGSLPASSQQLEHPAWAAILRP 376
>HAM1_MYCPA (Q73X89) HAM1 protein homolog| Length = 204 Score = 30.4 bits (67), Expect = 1.7 Identities = 16/51 (31%), Positives = 22/51 (43%) Frame = +3 Query: 177 PSSRSGRSGLPFCAYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDPL 329 P R S + CA + SG V + EW P + G FG+DP+ Sbjct: 114 PDERRAASFVSACALVSASGEVVVRGEW----PGRIAREPRGDGGFGYDPV 160
>FCPA_MACPY (Q40297) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast| precursor Length = 217 Score = 30.4 bits (67), Expect = 1.7 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 2/92 (2%) Frame = +3 Query: 147 SAVGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDP 326 + P L PS+ +G + A +S + MS E + + +P F +DP Sbjct: 9 ACAAAPGLRRPSAFNGAA---LTTSAKSSSAMKMSFE--------SEIGAQAPLGF-WDP 56 Query: 327 LGLATVPEN--FERFKESEIYHCRWAMLCVPG 416 LGL + FER + E+ H R AML + G Sbjct: 57 LGLLADADQDGFERLRYVEVKHGRIAMLAIAG 88
>NU3M_MACRO (P92666) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +3 Query: 240 VTMSAEWFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERF 365 + + A W P +L+ SSP + GFDPLG A +P + + F Sbjct: 18 IVLIAFWLP--QLYLYLEKSSPYECGFDPLGSARLPFSMKFF 57
>CCAC_AMPCA (P55738) Caroteno-chlorophyll a-c binding protein (Fragment)| Length = 102 Score = 29.6 bits (65), Expect = 2.9 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Frame = +3 Query: 318 FDPLGLAT--VPENFERFKESEIYHCRWAMLCVPG 416 FDPLG ENF++ ++EI H R AML G Sbjct: 15 FDPLGFTADGSVENFKKLAQTEIKHGRVAMLATMG 49
>RSP2_CAEEL (Q23120) Probable splicing factor, arginine/serine-rich 2| (RNA-binding protein srp-4) (CeSRp40) Length = 281 Score = 29.6 bits (65), Expect = 2.9 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 7/46 (15%) Frame = -1 Query: 411 ARRAWPSGSGRSRTP*TARSSPARWRGPG-------GRTRSPLARS 295 +R P RSR+P +RS PAR R PG R+ SP RS Sbjct: 189 SRSRSPRRRSRSRSPTRSRSPPARRRSPGSDRSDRKSRSASPKKRS 234
>NMDE3_MOUSE (Q01098) Glutamate [NMDA] receptor subunit epsilon 3 precursor| (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) Length = 1239 Score = 29.6 bits (65), Expect = 2.9 Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Frame = -1 Query: 396 PSGSG-RSRTP*T-ARSSPARWRGPGGRTRSPLARSRP 289 P+ SG RS TP + SP+ WR PGG R+PLAR P Sbjct: 932 PTTSGPRSCTPGPPGQPSPSGWRPPGG-GRTPLARRAP 968
>FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 212 Score = 29.6 bits (65), Expect = 2.9 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +3 Query: 294 GSSPGDFGFDPLGLATVP--ENFERFKESEIYHCRWAMLCVPG 416 G+ P +DPLGL E F+R + EI H R AML V G Sbjct: 41 GAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVVG 83
>FCPB_MACPY (Q40296) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast| precursor Length = 217 Score = 29.6 bits (65), Expect = 2.9 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 2/92 (2%) Frame = +3 Query: 147 SAVGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDP 326 + P PS+ +G + L A A ++ +++ +E + +P F +DP Sbjct: 9 ACAAAPGFRGPSAFNG-AALTTSAKACSAMKMSFESE----------IGAQAPLGF-WDP 56 Query: 327 LGLATVP--ENFERFKESEIYHCRWAMLCVPG 416 LGL E FER + E+ H R AML + G Sbjct: 57 LGLLADADQERFERLRYVEVKHGRIAMLAIAG 88
>NU3M_DIDMA (P41306) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 29.3 bits (64), Expect = 3.8 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +3 Query: 285 HLDGSSPGDFGFDPLGLATVPENFERF 365 +L+ SSP + GFDPLG A +P + + F Sbjct: 31 YLEKSSPYECGFDPLGSARLPFSMKFF 57
>CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor| Length = 1691 Score = 29.3 bits (64), Expect = 3.8 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 4/71 (5%) Frame = +3 Query: 156 GVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFD---- 323 G+P + P GR+GLP + GR PGQP LDG PG G Sbjct: 1403 GLPGPIGPPGDPGRNGLP--GFDGAGGR--KGDPGLPGQPGTRGLDG-PPGPDGMQGPPG 1457 Query: 324 PLGLATVPENF 356 P G +++ F Sbjct: 1458 PPGTSSIAHGF 1468
>FCPD_MACPY (Q40298) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor (Fragment) Length = 182 Score = 28.9 bits (63), Expect = 5.0 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Frame = +3 Query: 318 FDPLGLATVP--ENFERFKESEIYHCRWAMLCVPG 416 +DPLGL E FER + E+ H R AML + G Sbjct: 19 WDPLGLLADADQERFERLRYVEVKHGRIAMLAIAG 53
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 28.5 bits (62), Expect = 6.6 Identities = 15/48 (31%), Positives = 21/48 (43%) Frame = -3 Query: 334 RPRGSNPKSPGEEPSRWAGRGWPGNHSADMVTRPEVVA*AQNGSPERP 191 +P G+ P PG++ + G+G PG RP A G P P Sbjct: 175 KPGGARPSGPGQDRGQQGGQGRPGGQ------RPGAPAQRPGGRPGGP 216
>NMDE3_RAT (Q00961) Glutamate [NMDA] receptor subunit epsilon 3 precursor| (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) Length = 1237 Score = 28.5 bits (62), Expect = 6.6 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Frame = -1 Query: 396 PSGSG-RSRTP*T-ARSSPARWRGPGGRTRSPLARSRP 289 P+ SG RS TP + SP+ W PGG R+PLAR P Sbjct: 932 PTASGPRSSTPGPPGQPSPSGWGPPGGG-RTPLARRAP 968
>NU3M_PIG (O79880) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 115 Score = 28.5 bits (62), Expect = 6.6 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = +3 Query: 225 TTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERF 365 T + + + A W P A+ + +SP + GFDP+G A +P + + F Sbjct: 12 TLASLLVLIAFWLP--QLNAYSEKTSPYECGFDPMGSARLPFSMKFF 56
>NU3M_CANFA (Q9ZZ60) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 115 Score = 28.5 bits (62), Expect = 6.6 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = +3 Query: 225 TTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERF 365 T + + + A W P + D +SP + GFDP+G A +P + + F Sbjct: 12 TLASLLVLIAFWLP--QLNIYTDKTSPYECGFDPMGSARLPFSMKFF 56
>CMGA_RAT (P10354) Chromogranin A precursor (CgA) [Contains: Pancreastatin;| Beta-granin; WE-14] Length = 466 Score = 28.5 bits (62), Expect = 6.6 Identities = 17/66 (25%), Positives = 26/66 (39%) Frame = -3 Query: 376 SDSLNRSKFSGTVARPRGSNPKSPGEEPSRWAGRGWPGNHSADMVTRPEVVA*AQNGSPE 197 SD + F GT PR P +E S PG +A+ P + ++G P+ Sbjct: 151 SDKGQQDAFEGTTEGPRPQAFPEPKQESSMMGNSQSPGEDTANNTQSPTSLPSQEHGIPQ 210 Query: 196 RPDRDE 179 + E Sbjct: 211 TTEGSE 216
>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor| Length = 1685 Score = 28.5 bits (62), Expect = 6.6 Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 4/71 (5%) Frame = +3 Query: 156 GVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFD---- 323 G+P P GR+GLP + GR PGQP LDG PG G Sbjct: 1397 GLPGPTGPPGDPGRNGLP--GFDGAGGR--KGDPGLPGQPGTRGLDG-PPGPDGLQGPPG 1451 Query: 324 PLGLATVPENF 356 P G ++V F Sbjct: 1452 PPGTSSVAHGF 1462
>UL61_HCMVA (P16818) Hypothetical protein UL61| Length = 431 Score = 28.1 bits (61), Expect = 8.6 Identities = 16/34 (47%), Positives = 18/34 (52%) Frame = -1 Query: 390 GSGRSRTP*TARSSPARWRGPGGRTRSPLARSRP 289 G GR+RTP S+ GPG R RSP A P Sbjct: 230 GRGRARTPGPVHSAAG---GPGSRRRSPGAARDP 260
>DNAA_STRCO (P27902) Chromosomal replication initiator protein dnaA| Length = 656 Score = 28.1 bits (61), Expect = 8.6 Identities = 19/55 (34%), Positives = 22/55 (40%) Frame = -3 Query: 343 TVARPRGSNPKSPGEEPSRWAGRGWPGNHSADMVTRPEVVA*AQNGSPERPDRDE 179 T P G P++P PSR R PE+ A Q G E DRDE Sbjct: 91 TAGEPAGPAPQAPQSPPSRPQHR----------YEEPELPAPGQGGREEYRDRDE 135 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.127 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,889,725 Number of Sequences: 219361 Number of extensions: 893962 Number of successful extensions: 3538 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 3295 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3524 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)