ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast69g01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04, complete sequence Length = 176678 Score = 224 bits (113), Expect = 1e-55 Identities = 146/157 (92%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 145373 gctacttcaacaactactccctctcccagccccgccacttctgccgcgcctgccgccgct 145314 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgccacg 122 |||||||||||||||||||| |||| |||||||| || |||||||| ||||||||||||| Sbjct: 145313 actggacccgcggcggcgcgctccgcaacgtccccgtcggcggcggctaccgccgccacg 145254 Query: 123 ccaagcgcgccaaaccctagcaggcggcggcggcggg 159 ||||||||||||| ||| ||| |||| | |||||||| Sbjct: 145253 ccaagcgcgccaagcccaagccggcgtccgcggcggg 145217
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 224 bits (113), Expect = 1e-55 Identities = 146/157 (92%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 627974 gctacttcaacaactactccctctcccagccccgccacttctgccgcgcctgccgccgct 627915 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgccacg 122 |||||||||||||||||||| |||| |||||||| || |||||||| ||||||||||||| Sbjct: 627914 actggacccgcggcggcgcgctccgcaacgtccccgtcggcggcggctaccgccgccacg 627855 Query: 123 ccaagcgcgccaaaccctagcaggcggcggcggcggg 159 ||||||||||||| ||| ||| |||| | |||||||| Sbjct: 627854 ccaagcgcgccaagcccaagccggcgtccgcggcggg 627818 Score = 54.0 bits (27), Expect = 2e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 53 tgccgccgctactggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtac 112 |||||||||||||||||| |||||| || |||||||||| || || |||||||||| | Sbjct: 21410609 tgccgccgctactggaccaagggcggctcgctccggaacgtgcccgtcggcggcgggtgc 21410668 Query: 113 cgc 115 ||| Sbjct: 21410669 cgc 21410671
>dbj|AK108933.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-A09, full insert sequence Length = 1520 Score = 224 bits (113), Expect = 1e-55 Identities = 146/157 (92%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 312 gctacttcaacaactactccctctcccagccccgccacttctgccgcgcctgccgccgct 371 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgccacg 122 |||||||||||||||||||| |||| |||||||| || |||||||| ||||||||||||| Sbjct: 372 actggacccgcggcggcgcgctccgcaacgtccccgtcggcggcggctaccgccgccacg 431 Query: 123 ccaagcgcgccaaaccctagcaggcggcggcggcggg 159 ||||||||||||| ||| ||| |||| | |||||||| Sbjct: 432 ccaagcgcgccaagcccaagccggcgtccgcggcggg 468
>emb|X79935.1|ZMDOF3 Z.mays Dof3 mRNA Length = 1230 Score = 172 bits (87), Expect = 4e-40 Identities = 129/143 (90%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||| Sbjct: 135 gctacttcaacaactactccctcacgcagccgcgccacttctgccgggcctgccgccgct 194 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgccacg 122 ||||||| || ||||||||| |||| ||||| || || || ||||| ||||||||||||| Sbjct: 195 actggacgcgtggcggcgcgctccgcaacgtgccggtcggtggcggataccgccgccacg 254 Query: 123 ccaagcgcgccaaaccctagcag 145 ||||||||||||| ||| ||||| Sbjct: 255 ccaagcgcgccaagcccaagcag 277
>emb|AJ312326.1|HVU312326 Hordeum vulgare dof140 gene for dof zinc finger protein Length = 795 Score = 157 bits (79), Expect = 2e-35 Identities = 115/127 (90%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 269 gctacttcaacaactactccctcacgcagccccgccacttttgccgcgcatgccgccgct 328 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgccacg 122 ||||||||||||| |||||| |||| ||| |||| |||| |||||||| |||||||| | Sbjct: 329 actggacccgcggtggcgcgctccgcaacatccccattggtggcgggtatcgccgccatg 388 Query: 123 ccaagcg 129 ||||||| Sbjct: 389 ccaagcg 395
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 135 bits (68), Expect = 8e-29 Identities = 113/128 (88%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||| || |||||||| |||||||||||| || |||||||||| Sbjct: 8873 gctacttcaacaactactcgctgtcgcagccgcgccacttctgcaaggcttgccgccgct 8814 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgccacg 122 ||||||| |||||||||||| |||| |||||||| || |||||||||| ||||||| || Sbjct: 8813 actggacgcgcggcggcgcgctccgcaacgtccccgtcggcggcgggtgccgccgcaaca 8754 Query: 123 ccaagcgc 130 |||||||| Sbjct: 8753 ccaagcgc 8746
>ref|XM_477205.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1534 Score = 127 bits (64), Expect = 2e-26 Identities = 103/116 (88%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||||||| | |||||||||||||||||| || |||||||||| Sbjct: 270 gctacttcaacaactactccctcacccagccccgccacttctgcaaggcttgccgccgct 329 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||||||||||||||| |||| |||||||| || |||||||| | ||||||| Sbjct: 330 actggacccgcggcggcgccctccgcaacgtccccgtcggcggcggcttccgccgc 385
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 127 bits (64), Expect = 2e-26 Identities = 113/128 (88%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||| || |||||||| |||||||||||| || |||||||||| Sbjct: 23493287 gctacttcaacaactactcgctgtcgcagccgcgccacttctgcaaggcttgccgccgct 23493346 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgccacg 122 ||||||| |||||||||||| |||| |||||||| || |||||||||| ||||||| || Sbjct: 23493347 actggacgcgcggcggcgcg-tccgcaacgtccccgtcggcggcgggtgccgccgcaaca 23493405 Query: 123 ccaagcgc 130 |||||||| Sbjct: 23493406 ccaagcgc 23493413 Score = 75.8 bits (38), Expect = 7e-11 Identities = 62/70 (88%) Strand = Plus / Minus Query: 27 cgcagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgttcc 86 ||||||| || |||||||||||||||||||||||||||||||| | ||||||| | ||| Sbjct: 24758000 cgcagccgcggcacttctgccgcgcctgccgccgctactggacgctcggcggctccctcc 24757941 Query: 87 ggaacgtccc 96 | |||||||| Sbjct: 24757940 gcaacgtccc 24757931
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 127 bits (64), Expect = 2e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||||||| | |||||||||||||||||| || |||||||||| Sbjct: 7637527 gctacttcaacaactactccctcacccagccccgccacttctgcaaggcttgccgccgct 7637468 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||||||||||||||| |||| |||||||| || |||||||| | ||||||| Sbjct: 7637467 actggacccgcggcggcgccctccgcaacgtccccgtcggcggcggcttccgccgc 7637412 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||||| || |||||||| || ||||||||| || ||| |||| Sbjct: 19309210 gctactacaacaactactcgctgtcgcagccgcggcacttctgcaaggcgtgcaagcgct 19309269 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggt 110 ||||||| ||||||||| || | ||||||||||| || |||||||||| Sbjct: 19309270 actggacgcgcggcggcacgctgcggaacgtccccgtcggcggcgggt 19309317 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ctagcaggcggcggcggcgg 158 |||||||||||||||||||| Sbjct: 25617636 ctagcaggcggcggcggcgg 25617617 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ctagcaggcggcggcggcgg 158 |||||||||||||||||||| Sbjct: 5093297 ctagcaggcggcggcggcgg 5093278
>dbj|AK068542.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155H18, full insert sequence Length = 1534 Score = 127 bits (64), Expect = 2e-26 Identities = 103/116 (88%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||||||| | |||||||||||||||||| || |||||||||| Sbjct: 270 gctacttcaacaactactccctcacccagccccgccacttctgcaaggcttgccgccgct 329 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||||||||||||||| |||| |||||||| || |||||||| | ||||||| Sbjct: 330 actggacccgcggcggcgccctccgcaacgtccccgtcggcggcggcttccgccgc 385
>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0407H12 Length = 167754 Score = 127 bits (64), Expect = 2e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||||||| | |||||||||||||||||| || |||||||||| Sbjct: 142937 gctacttcaacaactactccctcacccagccccgccacttctgcaaggcttgccgccgct 142878 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||||||||||||||| |||| |||||||| || |||||||| | ||||||| Sbjct: 142877 actggacccgcggcggcgccctccgcaacgtccccgtcggcggcggcttccgccgc 142822
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 127 bits (64), Expect = 2e-26 Identities = 113/128 (88%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||| || |||||||| |||||||||||| || |||||||||| Sbjct: 23421478 gctacttcaacaactactcgctgtcgcagccgcgccacttctgcaaggcttgccgccgct 23421537 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgccacg 122 ||||||| |||||||||||| |||| |||||||| || |||||||||| ||||||| || Sbjct: 23421538 actggacgcgcggcggcgcg-tccgcaacgtccccgtcggcggcgggtgccgccgcaaca 23421596 Query: 123 ccaagcgc 130 |||||||| Sbjct: 23421597 ccaagcgc 23421604 Score = 75.8 bits (38), Expect = 7e-11 Identities = 62/70 (88%) Strand = Plus / Minus Query: 27 cgcagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgttcc 86 ||||||| || |||||||||||||||||||||||||||||||| | ||||||| | ||| Sbjct: 24686206 cgcagccgcggcacttctgccgcgcctgccgccgctactggacgctcggcggctccctcc 24686147 Query: 87 ggaacgtccc 96 | |||||||| Sbjct: 24686146 gcaacgtccc 24686137
>emb|AL845346.4|CNS08CB8 Oryza sativa chromosome 12, . BAC OSJNBa0018E22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 69273 Score = 127 bits (64), Expect = 2e-26 Identities = 113/128 (88%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||| || |||||||| |||||||||||| || |||||||||| Sbjct: 13835 gctacttcaacaactactcgctgtcgcagccgcgccacttctgcaaggcttgccgccgct 13894 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgccacg 122 ||||||| |||||||||||| |||| |||||||| || |||||||||| ||||||| || Sbjct: 13895 actggacgcgcggcggcgcg-tccgcaacgtccccgtcggcggcgggtgccgccgcaaca 13953 Query: 123 ccaagcgc 130 |||||||| Sbjct: 13954 ccaagcgc 13961
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 125 bits (63), Expect = 8e-26 Identities = 102/115 (88%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 9332578 gctactacaacaactactccctctcccagccccgccacttctgcaagacctgccgccgct 9332519 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccg 117 ||||||| ||||||||| || |||| |||||||| || |||||||||| |||||| Sbjct: 9332518 actggacgcgcggcggctcgctccgcaacgtccccgtcggcggcgggtgccgccg 9332464 Score = 119 bits (60), Expect = 5e-24 Identities = 102/116 (87%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||| ||||||||||| |||||||||||| | |||||||||| Sbjct: 34151863 gctacttcaacaactactcgctctcgcagccgcgccacttctgcaagacgtgccgccgct 34151922 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||| |||||||| ||| |||| |||||||| || |||||||||| ||||||| Sbjct: 34151923 actggacgcgcggcggagcgctccgcaacgtccccgtcggcggcgggtgccgccgc 34151978 Score = 85.7 bits (43), Expect = 7e-14 Identities = 64/71 (90%) Strand = Plus / Minus Query: 26 tcgcagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgttc 85 |||||||| ||||||||||||||||||||||||||||||||||| | ||||||| | || Sbjct: 23283111 tcgcagccgcgccacttctgccgcgcctgccgccgctactggacgctcggcggctccctc 23283052 Query: 86 cggaacgtccc 96 || |||||||| Sbjct: 23283051 cgcaacgtccc 23283041 Score = 58.0 bits (29), Expect = 2e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||| | ||||| |||||||||||| | |||||||| | Sbjct: 31359608 gctactacaacaactacaacctcacccagccgcgccacttctgcaagacgtgccgccggt 31359549 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgc 115 |||||||| ||||||||| |||| |||||||| | |||||||||| |||| Sbjct: 31359548 actggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggtgccgc 31359496 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcttt 165 ||||||||||||||||||||| Sbjct: 25251232 ggcggcggcggcgggggcttt 25251252 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cggcggcgcgttccggaacg 92 |||||||||||||||||||| Sbjct: 3684029 cggcggcgcgttccggaacg 3684010
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 125 bits (63), Expect = 8e-26 Identities = 102/115 (88%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 29978 gctactacaacaactactccctctcccagccccgccacttctgcaagacctgccgccgct 29919 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccg 117 ||||||| ||||||||| || |||| |||||||| || |||||||||| |||||| Sbjct: 29918 actggacgcgcggcggctcgctccgcaacgtccccgtcggcggcgggtgccgccg 29864
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 125 bits (63), Expect = 8e-26 Identities = 102/115 (88%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 9330473 gctactacaacaactactccctctcccagccccgccacttctgcaagacctgccgccgct 9330414 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccg 117 ||||||| ||||||||| || |||| |||||||| || |||||||||| |||||| Sbjct: 9330413 actggacgcgcggcggctcgctccgcaacgtccccgtcggcggcgggtgccgccg 9330359 Score = 119 bits (60), Expect = 5e-24 Identities = 102/116 (87%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||| ||||||||||| |||||||||||| | |||||||||| Sbjct: 34242335 gctacttcaacaactactcgctctcgcagccgcgccacttctgcaagacgtgccgccgct 34242394 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||| |||||||| ||| |||| |||||||| || |||||||||| ||||||| Sbjct: 34242395 actggacgcgcggcggagcgctccgcaacgtccccgtcggcggcgggtgccgccgc 34242450 Score = 85.7 bits (43), Expect = 7e-14 Identities = 64/71 (90%) Strand = Plus / Minus Query: 26 tcgcagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgttc 85 |||||||| ||||||||||||||||||||||||||||||||||| | ||||||| | || Sbjct: 23276139 tcgcagccgcgccacttctgccgcgcctgccgccgctactggacgctcggcggctccctc 23276080 Query: 86 cggaacgtccc 96 || |||||||| Sbjct: 23276079 cgcaacgtccc 23276069 Score = 58.0 bits (29), Expect = 2e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||| | ||||| |||||||||||| | |||||||| | Sbjct: 31450124 gctactacaacaactacaacctcacccagccgcgccacttctgcaagacgtgccgccggt 31450065 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgc 115 |||||||| ||||||||| |||| |||||||| | |||||||||| |||| Sbjct: 31450064 actggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggtgccgc 31450012 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcttt 165 ||||||||||||||||||||| Sbjct: 25342541 ggcggcggcggcgggggcttt 25342561 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cggcggcgcgttccggaacg 92 |||||||||||||||||||| Sbjct: 3684140 cggcggcgcgttccggaacg 3684121
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence Length = 134014 Score = 125 bits (63), Expect = 8e-26 Identities = 102/115 (88%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 23613 gctactacaacaactactccctctcccagccccgccacttctgcaagacctgccgccgct 23672 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccg 117 ||||||| ||||||||| || |||| |||||||| || |||||||||| |||||| Sbjct: 23673 actggacgcgcggcggctcgctccgcaacgtccccgtcggcggcgggtgccgccg 23727
>ref|XM_470142.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1068 Score = 119 bits (60), Expect = 5e-24 Identities = 102/116 (87%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||| ||||||||||| |||||||||||| | |||||||||| Sbjct: 215 gctacttcaacaactactcgctctcgcagccgcgccacttctgcaagacgtgccgccgct 274 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||| |||||||| ||| |||| |||||||| || |||||||||| ||||||| Sbjct: 275 actggacgcgcggcggagcgctccgcaacgtccccgtcggcggcgggtgccgccgc 330
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 119 bits (60), Expect = 5e-24 Identities = 102/116 (87%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||| ||||||||||| |||||||||||| | |||||||||| Sbjct: 115675 gctacttcaacaactactcgctctcgcagccgcgccacttctgcaagacgtgccgccgct 115734 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||| |||||||| ||| |||| |||||||| || |||||||||| ||||||| Sbjct: 115735 actggacgcgcggcggagcgctccgcaacgtccccgtcggcggcgggtgccgccgc 115790
>emb|AJ312327.1|HVU312327 Hordeum vulgare dof155 gene for dof zinc finger protein Length = 986 Score = 103 bits (52), Expect = 3e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| ||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 203 gctactacaacaactactccctctcgcagccccgccacttctgcaaggcatgccgccgct 262 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||| ||||| ||||| ||||| ||| || || || ||||||| ||||||| Sbjct: 263 actggacgcgcgggggcgccctccggtccgttccggtgggaggcgggtgccgccgc 318
>ref|NM_189690.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 91.7 bits (46), Expect = 1e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| ||| ||||||| |||||||||||| || |||||||||| Sbjct: 128 gctactacaacaactacaacctggcgcagccgcgccacttctgcaaggcgtgccgccgct 187 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 ||||||| |||||||||||| |||| |||||||| || |||||||| Sbjct: 188 actggacgcgcggcggcgcgctccgcaacgtccccgtcggcggcgg 233
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 91.7 bits (46), Expect = 1e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| ||| ||||||| |||||||||||| || |||||||||| Sbjct: 5013736 gctactacaacaactacaacctggcgcagccgcgccacttctgcaaggcgtgccgccgct 5013795 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 ||||||| |||||||||||| |||| |||||||| || |||||||| Sbjct: 5013796 actggacgcgcggcggcgcgctccgcaacgtccccgtcggcggcgg 5013841 Score = 65.9 bits (33), Expect = 7e-08 Identities = 72/85 (84%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||| | | |||||| |||||| |||||||| |||||||||||| Sbjct: 27670048 gctacttcaacaactacaacgtgcggcagccgcgccacctctgccgctcctgccgccgct 27670107 Query: 63 actggacccgcggcggcgcgttccg 87 ||||||| |||||||||| |||| Sbjct: 27670108 actggacggccggcggcgcgctccg 27670132 Score = 60.0 bits (30), Expect = 4e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||| | || ||||| |||||||||||| ||||||| ||||| Sbjct: 31844403 gctacttcaacaactacaacgtcaaccagccgcgccacttctgcaaggcctgccaccgct 31844344 Query: 63 actggacccgcggcggcgcgttccggaacgtccc 96 ||||||| |||||||||| |||| |||||||| Sbjct: 31844343 actggacggccggcggcgcgctccgcaacgtccc 31844310 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctgccgcgcctgccgccgct 62 |||||||||||||||||||| Sbjct: 3120532 ctgccgcgcctgccgccgct 3120513
>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0001B06 Length = 140304 Score = 91.7 bits (46), Expect = 1e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| ||| ||||||| |||||||||||| || |||||||||| Sbjct: 7174 gctactacaacaactacaacctggcgcagccgcgccacttctgcaaggcgtgccgccgct 7233 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 ||||||| |||||||||||| |||| |||||||| || |||||||| Sbjct: 7234 actggacgcgcggcggcgcgctccgcaacgtccccgtcggcggcgg 7279
>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671B11 Length = 168372 Score = 91.7 bits (46), Expect = 1e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| ||| ||||||| |||||||||||| || |||||||||| Sbjct: 114189 gctactacaacaactacaacctggcgcagccgcgccacttctgcaaggcgtgccgccgct 114248 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 ||||||| |||||||||||| |||| |||||||| || |||||||| Sbjct: 114249 actggacgcgcggcggcgcgctccgcaacgtccccgtcggcggcgg 114294
>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete sequence Length = 154558 Score = 85.7 bits (43), Expect = 7e-14 Identities = 64/71 (90%) Strand = Plus / Minus Query: 26 tcgcagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgttc 85 |||||||| ||||||||||||||||||||||||||||||||||| | ||||||| | || Sbjct: 119592 tcgcagccgcgccacttctgccgcgcctgccgccgctactggacgctcggcggctccctc 119533 Query: 86 cggaacgtccc 96 || |||||||| Sbjct: 119532 cgcaacgtccc 119522
>dbj|AK119803.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-F03, full insert sequence Length = 965 Score = 85.7 bits (43), Expect = 7e-14 Identities = 64/71 (90%) Strand = Plus / Plus Query: 26 tcgcagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgttc 85 |||||||| ||||||||||||||||||||||||||||||||||| | ||||||| | || Sbjct: 262 tcgcagccgcgccacttctgccgcgcctgccgccgctactggacgctcggcggctccctc 321 Query: 86 cggaacgtccc 96 || |||||||| Sbjct: 322 cgcaacgtccc 332
>gb|AY461803.1| Oryza sativa (japonica cultivar-group) Dof28 mRNA, complete cds Length = 879 Score = 79.8 bits (40), Expect = 4e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 26 tcgcagccccgccacttctgccgcgcctgccgccgctactggac 69 |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 235 tcgcagccgcgccacttctgccgcgcctgccgccgctactggac 278
>ref|XM_474359.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 621 Score = 79.8 bits (40), Expect = 4e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 26 tcgcagccccgccacttctgccgcgcctgccgccgctactggac 69 |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 208 tcgcagccgcgccacttctgccgcgcctgccgccgctactggac 251
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence Length = 150206 Score = 79.8 bits (40), Expect = 4e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 26 tcgcagccccgccacttctgccgcgcctgccgccgctactggac 69 |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 145321 tcgcagccgcgccacttctgccgcgcctgccgccgctactggac 145278
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 79.8 bits (40), Expect = 4e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 26 tcgcagccccgccacttctgccgcgcctgccgccgctactggac 69 |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 34691200 tcgcagccgcgccacttctgccgcgcctgccgccgctactggac 34691157
>emb|AJ312329.1|HVU312329 Hordeum vulgare partial dof171 gene for dof zinc finger protein Length = 535 Score = 79.8 bits (40), Expect = 4e-12 Identities = 106/128 (82%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||||||||| | |||||||| |||||||||| | | ||| |||||| Sbjct: 150 gctacttcaacaactactccctcacccagccccgtcacttctgccacacatgcggccgct 209 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgccgccacg 122 ||||| || ||||||||| |||| | |||| || ||| || ||||| || |||||| Sbjct: 210 cttggactcgtggcggcgcgctccgcagtgtccgcgtgggcagcaggtacagctgccacg 269 Query: 123 ccaagcgc 130 |||||||| Sbjct: 270 ccaagcgc 277
>dbj|AK107524.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-F12, full insert sequence Length = 1096 Score = 79.8 bits (40), Expect = 4e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 26 tcgcagccccgccacttctgccgcgcctgccgccgctactggac 69 |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 345 tcgcagccgcgccacttctgccgcgcctgccgccgctactggac 388
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete sequence Length = 100836 Score = 79.8 bits (40), Expect = 4e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 26 tcgcagccccgccacttctgccgcgcctgccgccgctactggac 69 |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 89428 tcgcagccgcgccacttctgccgcgcctgccgccgctactggac 89385
>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete sequence Length = 103264 Score = 79.8 bits (40), Expect = 4e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 26 tcgcagccccgccacttctgccgcgcctgccgccgctactggac 69 |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 34524 tcgcagccgcgccacttctgccgcgcctgccgccgctactggac 34481
>gb|AF542507.1| Oryza sativa Dof-like protein 34 mRNA, partial cds Length = 1134 Score = 75.8 bits (38), Expect = 7e-11 Identities = 89/106 (83%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||||||||||| ||| |||||||| | |||||||||| Sbjct: 170 gctactacaacaactacagcctctcgcagccgcgctacttctgcaagacgtgccgccgct 229 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| |||||| || ||||||||||||| || |||||||| Sbjct: 230 actggaccaagggcggctcgctccggaacgtccccgtcggcggcgg 275
>emb|AL954829.6|CNS08CD5 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140383 Score = 75.8 bits (38), Expect = 7e-11 Identities = 62/70 (88%) Strand = Plus / Minus Query: 27 cgcagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgttcc 86 ||||||| || |||||||||||||||||||||||||||||||| | ||||||| | ||| Sbjct: 65157 cgcagccgcggcacttctgccgcgcctgccgccgctactggacgctcggcggctccctcc 65098 Query: 87 ggaacgtccc 96 | |||||||| Sbjct: 65097 gcaacgtccc 65088
>ref|XM_478332.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1080 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||||| || |||||||| || ||||||||| || ||| |||| Sbjct: 185 gctactacaacaactactcgctgtcgcagccgcggcacttctgcaaggcgtgcaagcgct 244 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggt 110 ||||||| ||||||||| || | ||||||||||| || |||||||||| Sbjct: 245 actggacgcgcggcggcacgctgcggaacgtccccgtcggcggcgggt 292
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||||| |||||||||||||||||| || |||||||||| Sbjct: 10112384 gctactacaacaactacaacctctcccagccccgccacttctgcaaggcgtgccgccgct 10112443 Query: 63 actggacc 70 |||||||| Sbjct: 10112444 actggacc 10112451 Score = 42.1 bits (21), Expect = 0.94 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 aaaccctagcaggcggcggcggcgg 158 ||||||||| ||||||||||||||| Sbjct: 30216849 aaaccctaggaggcggcggcggcgg 30216873 Score = 42.1 bits (21), Expect = 0.94 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 aaaccctagcaggcggcggcggcgg 158 ||||||||| ||||||||||||||| Sbjct: 30136677 aaaccctaggaggcggcggcggcgg 30136701
>dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0491D10 Length = 162039 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||||| |||||||||||||||||| || |||||||||| Sbjct: 78750 gctactacaacaactacaacctctcccagccccgccacttctgcaaggcgtgccgccgct 78809 Query: 63 actggacc 70 |||||||| Sbjct: 78810 actggacc 78817
>dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1163_G04 Length = 106253 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||||| || |||||||| || ||||||||| || ||| |||| Sbjct: 85436 gctactacaacaactactcgctgtcgcagccgcggcacttctgcaaggcgtgcaagcgct 85495 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggt 110 ||||||| ||||||||| || | ||||||||||| || |||||||||| Sbjct: 85496 actggacgcgcggcggcacgctgcggaacgtccccgtcggcggcgggt 85543
>ref|XM_467389.1| Oryza sativa (japonica cultivar-group), mRNA Length = 900 Score = 67.9 bits (34), Expect = 2e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| ||| |||||| |||||||||||| ||| |||||||| | |||||||||| Sbjct: 194 gctactacaataactacagcctctcgcagccgcgctacttctgcaagacgtgccgccgct 253 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| |||||| || ||||||||||||| || |||||||| Sbjct: 254 actggaccaagggcggctcgctccggaacgtccccgtcggcggcgg 299
>ref|XM_464857.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1537 Score = 67.9 bits (34), Expect = 2e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 27 cgcagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgttcc 86 ||||||| ||| |||||||||||| ||||||||||||||||||| |||||| | ||| Sbjct: 293 cgcagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctcc 352 Query: 87 ggaacgtccctgttggcggcgg 108 | |||||||| || |||||||| Sbjct: 353 gcaacgtccccgtcggcggcgg 374
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 67.9 bits (34), Expect = 2e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| ||| |||||| |||||||||||| ||| |||||||| | |||||||||| Sbjct: 105038 gctactacaataactacagcctctcgcagccgcgctacttctgcaagacgtgccgccgct 105097 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| |||||| || ||||||||||||| || |||||||| Sbjct: 105098 actggaccaagggcggctcgctccggaacgtccccgtcggcggcgg 105143
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 67.9 bits (34), Expect = 2e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| ||| |||||| |||||||||||| ||| |||||||| | |||||||||| Sbjct: 29257593 gctactacaataactacagcctctcgcagccgcgctacttctgcaagacgtgccgccgct 29257534 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| |||||| || ||||||||||||| || |||||||| Sbjct: 29257533 actggaccaagggcggctcgctccggaacgtccccgtcggcggcgg 29257488 Score = 67.9 bits (34), Expect = 2e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 27 cgcagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgttcc 86 ||||||| ||| |||||||||||| ||||||||||||||||||| |||||| | ||| Sbjct: 8590661 cgcagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctcc 8590602 Query: 87 ggaacgtccctgttggcggcgg 108 | |||||||| || |||||||| Sbjct: 8590601 gcaacgtccccgtcggcggcgg 8590580 Score = 60.0 bits (30), Expect = 4e-06 Identities = 87/106 (82%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||||||||||| |||||||||||| ||||||||| | Sbjct: 30226423 gctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccggt 30226364 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| ||||||| |||| |||||||| || |||||||| Sbjct: 30226363 actggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 30226318 Score = 44.1 bits (22), Expect = 0.24 Identities = 85/106 (80%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||| |||||| ||| |||||||| | |||||||||| Sbjct: 27455582 gctactacaacaactacagcctccagcagccgcgctacttctgcaagacgtgccgccgct 27455523 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 ||||||| |||||| || |||| |||||||| || |||||||| Sbjct: 27455522 actggacggagggcggctcgctccgcaacgtccccgtcggcggcgg 27455477 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaccctagcaggcggcggcg 154 |||||||||||||||||||| Sbjct: 10955072 aaccctagcaggcggcggcg 10955091
>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0009N02 Length = 121142 Score = 67.9 bits (34), Expect = 2e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 27 cgcagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgttcc 86 ||||||| ||| |||||||||||| ||||||||||||||||||| |||||| | ||| Sbjct: 59984 cgcagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctcc 59925 Query: 87 ggaacgtccctgttggcggcgg 108 | |||||||| || |||||||| Sbjct: 59924 gcaacgtccccgtcggcggcgg 59903
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 67.9 bits (34), Expect = 2e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| ||| |||||| |||||||||||| ||| |||||||| | |||||||||| Sbjct: 54938 gctactacaataactacagcctctcgcagccgcgctacttctgcaagacgtgccgccgct 54879 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| |||||| || ||||||||||||| || |||||||| Sbjct: 54878 actggaccaagggcggctcgctccggaacgtccccgtcggcggcgg 54833
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 67.9 bits (34), Expect = 2e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| ||| |||||| |||||||||||| ||| |||||||| | |||||||||| Sbjct: 147561 gctactacaataactacagcctctcgcagccgcgctacttctgcaagacgtgccgccgct 147502 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| |||||| || ||||||||||||| || |||||||| Sbjct: 147501 actggaccaagggcggctcgctccggaacgtccccgtcggcggcgg 147456
>dbj|AK107294.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-C02, full insert sequence Length = 1537 Score = 67.9 bits (34), Expect = 2e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 27 cgcagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgttcc 86 ||||||| ||| |||||||||||| ||||||||||||||||||| |||||| | ||| Sbjct: 293 cgcagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctcc 352 Query: 87 ggaacgtccctgttggcggcgg 108 | |||||||| || |||||||| Sbjct: 353 gcaacgtccccgtcggcggcgg 374
>dbj|AB028131.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1572 Score = 67.9 bits (34), Expect = 2e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 27 cgcagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgttcc 86 ||||||| ||| |||||||||||| ||||||||||||||||||| |||||| | ||| Sbjct: 322 cgcagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctcc 381 Query: 87 ggaacgtccctgttggcggcgg 108 | |||||||| || |||||||| Sbjct: 382 gcaacgtccccgtcggcggcgg 403
>ref|NM_191985.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 528 Score = 65.9 bits (33), Expect = 7e-08 Identities = 72/85 (84%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||| | | |||||| |||||| |||||||| |||||||||||| Sbjct: 290 gctacttcaacaactacaacgtgcggcagccgcgccacctctgccgctcctgccgccgct 349 Query: 63 actggacccgcggcggcgcgttccg 87 ||||||| |||||||||| |||| Sbjct: 350 actggacggccggcggcgcgctccg 374
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 65.9 bits (33), Expect = 7e-08 Identities = 72/85 (84%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||| | | |||||| |||||| |||||||| |||||||||||| Sbjct: 78614 gctacttcaacaactacaacgtgcggcagccgcgccacctctgccgctcctgccgccgct 78673 Query: 63 actggacccgcggcggcgcgttccg 87 ||||||| |||||||||| |||| Sbjct: 78674 actggacggccggcggcgcgctccg 78698
>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0007F06 Length = 150817 Score = 65.9 bits (33), Expect = 7e-08 Identities = 72/85 (84%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||| | | |||||| |||||| |||||||| |||||||||||| Sbjct: 137342 gctacttcaacaactacaacgtgcggcagccgcgccacctctgccgctcctgccgccgct 137401 Query: 63 actggacccgcggcggcgcgttccg 87 ||||||| |||||||||| |||| Sbjct: 137402 actggacggccggcggcgcgctccg 137426
>ref|NM_179795.1| Arabidopsis thaliana DNA binding / transcription factor AT2G28810 mRNA, complete cds Length = 1371 Score = 61.9 bits (31), Expect = 1e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 5 tacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgctac 64 ||||||||||||||| |||| ||||||| |||||||||||| || ||||| |||||| Sbjct: 373 tacttcaacaactacaacctcacgcagccacgccacttctgcaaagcttgccgtcgctac 432 Query: 65 tggacccgcggcggcgcgttccggaacgtccctgt 99 ||||| || ||||| || || ||||||| ||||| Sbjct: 433 tggacacgtggcggtgccttgaggaacgtacctgt 467
>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete sequence Length = 107097 Score = 61.9 bits (31), Expect = 1e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 5 tacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgctac 64 ||||||||||||||| |||| ||||||| |||||||||||| || ||||| |||||| Sbjct: 35563 tacttcaacaactacaacctcacgcagccacgccacttctgcaaagcttgccgtcgctac 35622 Query: 65 tggacccgcggcggcgcgttccggaacgtccctgt 99 ||||| || ||||| || || ||||||| ||||| Sbjct: 35623 tggacacgtggcggtgccttgaggaacgtacctgt 35657
>emb|BX819308.1|CNS0A8SY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB67ZB08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1287 Score = 61.9 bits (31), Expect = 1e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 5 tacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgctac 64 ||||||||||||||| |||| ||||||| |||||||||||| || ||||| |||||| Sbjct: 370 tacttcaacaactacaacctcacgcagccacgccacttctgcaaagcttgccgtcgctac 429 Query: 65 tggacccgcggcggcgcgttccggaacgtccctgt 99 ||||| || ||||| || || ||||||| ||||| Sbjct: 430 tggacacgtggcggtgccttgaggaacgtacctgt 464
>emb|BX818903.1|CNS0A8YZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB25ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1436 Score = 61.9 bits (31), Expect = 1e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 5 tacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgctac 64 ||||||||||||||| |||| ||||||| |||||||||||| || ||||| |||||| Sbjct: 367 tacttcaacaactacaacctcacgcagccacgccacttctgcaaagcttgccgtcgctac 426 Query: 65 tggacccgcggcggcgcgttccggaacgtccctgt 99 ||||| || ||||| || || ||||||| ||||| Sbjct: 427 tggacacgtggcggtgccttgaggaacgtacctgt 461
>emb|BX818852.1|CNS0A91K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1257 Score = 61.9 bits (31), Expect = 1e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 5 tacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgctac 64 ||||||||||||||| |||| ||||||| |||||||||||| || ||||| |||||| Sbjct: 359 tacttcaacaactacaacctcacgcagccacgccacttctgcaaagcttgccgtcgctac 418 Query: 65 tggacccgcggcggcgcgttccggaacgtccctgt 99 ||||| || ||||| || || ||||||| ||||| Sbjct: 419 tggacacgtggcggtgccttgaggaacgtacctgt 453
>ref|XM_507527.1| PREDICTED Oryza sativa (japonica cultivar-group), B1121A12.10 mRNA Length = 1328 Score = 60.0 bits (30), Expect = 4e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||||||||||| |||||||||||| ||||||||| | Sbjct: 371 gctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccggt 430 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| ||||||| |||| |||||||| || |||||||| Sbjct: 431 actggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 476
>ref|XM_467571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1277 Score = 60.0 bits (30), Expect = 4e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||||||||||| |||||||||||| ||||||||| | Sbjct: 317 gctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccggt 376 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| ||||||| |||| |||||||| || |||||||| Sbjct: 377 actggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 422
>ref|XM_506950.2| PREDICTED Oryza sativa (japonica cultivar-group), B1121A12.10 mRNA Length = 1343 Score = 60.0 bits (30), Expect = 4e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||||||||||| |||||||||||| ||||||||| | Sbjct: 377 gctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccggt 436 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| ||||||| |||| |||||||| || |||||||| Sbjct: 437 actggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 482
>ref|NM_191305.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 618 Score = 60.0 bits (30), Expect = 4e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||| | || ||||| |||||||||||| ||||||| ||||| Sbjct: 347 gctacttcaacaactacaacgtcaaccagccgcgccacttctgcaaggcctgccaccgct 406 Query: 63 actggacccgcggcggcgcgttccggaacgtccc 96 ||||||| |||||||||| |||| |||||||| Sbjct: 407 actggacggccggcggcgcgctccgcaacgtccc 440
>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131G08 Length = 158241 Score = 60.0 bits (30), Expect = 4e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||| | || ||||| |||||||||||| ||||||| ||||| Sbjct: 30481 gctacttcaacaactacaacgtcaaccagccgcgccacttctgcaaggcctgccaccgct 30422 Query: 63 actggacccgcggcggcgcgttccggaacgtccc 96 ||||||| |||||||||| |||| |||||||| Sbjct: 30421 actggacggccggcggcgcgctccgcaacgtccc 30388
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1121A12 Length = 138796 Score = 60.0 bits (30), Expect = 4e-06 Identities = 87/106 (82%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||||||||||| |||||||||||| ||||||||| | Sbjct: 27340 gctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccggt 27281 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| ||||||| |||| |||||||| || |||||||| Sbjct: 27280 actggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 27235
>dbj|AK100892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130J11, full insert sequence Length = 1328 Score = 60.0 bits (30), Expect = 4e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||||||||||| |||||||||||| ||||||||| | Sbjct: 371 gctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccggt 430 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| ||||||| |||| |||||||| || |||||||| Sbjct: 431 actggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 476
>dbj|AK101321.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034E07, full insert sequence Length = 1343 Score = 60.0 bits (30), Expect = 4e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||||||||||| |||||||||||| ||||||||| | Sbjct: 377 gctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccggt 436 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| ||||||| |||| |||||||| || |||||||| Sbjct: 437 actggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 482
>dbj|AK071083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023076F14, full insert sequence Length = 1078 Score = 60.0 bits (30), Expect = 4e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||| | || ||||| |||||||||||| ||||||| ||||| Sbjct: 474 gctacttcaacaactacaacgtcaaccagccgcgccacttctgcaaggcctgccaccgct 533 Query: 63 actggacccgcggcggcgcgttccggaacgtccc 96 ||||||| |||||||||| |||| |||||||| Sbjct: 534 actggacggccggcggcgcgctccgcaacgtccc 567
>dbj|AK061000.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F09, full insert sequence Length = 1277 Score = 60.0 bits (30), Expect = 4e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||||||||||| |||||||||||| ||||||||| | Sbjct: 317 gctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccggt 376 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| ||||||| |||| |||||||| || |||||||| Sbjct: 377 actggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 422
>dbj|AB028132.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1331 Score = 60.0 bits (30), Expect = 4e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||||||||||| |||||||||||| ||||||||| | Sbjct: 360 gctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccggt 419 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| ||||||| |||| |||||||| || |||||||| Sbjct: 420 actggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 465
>ref|XM_469889.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1415 Score = 58.0 bits (29), Expect = 2e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||| | ||||| |||||||||||| | |||||||| | Sbjct: 245 gctactacaacaactacaacctcacccagccgcgccacttctgcaagacgtgccgccggt 304 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgc 115 |||||||| ||||||||| |||| |||||||| | |||||||||| |||| Sbjct: 305 actggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggtgccgc 357
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 58.0 bits (29), Expect = 2e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||| | ||||| |||||||||||| | |||||||| | Sbjct: 136192 gctactacaacaactacaacctcacccagccgcgccacttctgcaagacgtgccgccggt 136251 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgc 115 |||||||| ||||||||| |||| |||||||| | |||||||||| |||| Sbjct: 136252 actggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggtgccgc 136304
>dbj|AK063380.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-F11, full insert sequence Length = 1626 Score = 58.0 bits (29), Expect = 2e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||| | ||||| |||||||||||| | |||||||| | Sbjct: 427 gctactacaacaactacaacctcacccagccgcgccacttctgcaagacgtgccgccggt 486 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtaccgc 115 |||||||| ||||||||| |||| |||||||| | |||||||||| |||| Sbjct: 487 actggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggtgccgc 539
>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01, complete sequence Length = 160142 Score = 54.0 bits (27), Expect = 2e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 53 tgccgccgctactggacccgcggcggcgcgttccggaacgtccctgttggcggcgggtac 112 |||||||||||||||||| |||||| || |||||||||| || || |||||||||| | Sbjct: 3692 tgccgccgctactggaccaagggcggctcgctccggaacgtgcccgtcggcggcgggtgc 3751 Query: 113 cgc 115 ||| Sbjct: 3752 cgc 3754
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 27 cgcagccccgccacttctgccgcgcctgccgccgctactggac 69 ||||||| || || ||||||||||| ||||||||||||||||| Sbjct: 65935 cgcagccgcggcatttctgccgcgcgtgccgccgctactggac 65893
>emb|AJ012284.1|TAE012284 Triticum aestivum mRNA for DNA binding protein PBF, partial Length = 993 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 29 cagccccgccacttctgccgcgcctgccgccgctactggaccc 71 ||||||||| |||||||| |||||||||||||||||||||| Sbjct: 172 cagccccgctacttctgcaaggcctgccgccgctactggaccc 214
>emb|AJ312328.1|HVU312328 Hordeum vulgare partial dof151 gene for dof zinc finger protein Length = 657 Score = 54.0 bits (27), Expect = 2e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||| | || ||||| || ||||||||||| ||||||| ||||| Sbjct: 254 gctacttcaacaactacaacgtcaaccagccgcggcacttctgccgagcctgccaccgct 313 Query: 63 actggac 69 ||||||| Sbjct: 314 actggac 320
>gb|AY496057.2| Triticum aestivum Dof DNA-binding protein mRNA, complete cds Length = 1279 Score = 54.0 bits (27), Expect = 2e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 29 cagccccgccacttctgccgcgcctgccgccgctactggaccc 71 ||||||||| |||||||| |||||||||||||||||||||| Sbjct: 215 cagccccgctacttctgcaaggcctgccgccgctactggaccc 257
>gb|DQ490965.1| Mutant Zea mays clone pGR25C22 disrupted DOF1 (Dof1) gene, promoter region and complete cds Length = 12502 Score = 52.0 bits (26), Expect = 0.001 Identities = 86/106 (81%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| | ||| ||||| |||||||||||| | ||||||||||| Sbjct: 9127 gctactacaacaactacaacacctcccagccgcgccacttctgcaagggctgccgccgct 9186 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| |||||| || | || |||||||| || |||||||| Sbjct: 9187 actggaccaagggcggcacgctgcgcaacgtccccgtcggcggcgg 9232
>emb|AJ312331.1|HVU312331 Hordeum vulgare partial dof172 gene for dof zinc finger protein, exon 1 Length = 534 Score = 52.0 bits (26), Expect = 0.001 Identities = 86/106 (81%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| ||| |||||||| |||||||||||| | ||||| || | Sbjct: 128 gctactacaacaactacagcctgtcgcagccgcgccacttctgcaagacatgccggcggt 187 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| ||||||||| |||| | |||||| || |||||||| Sbjct: 188 actggaccaagggcggcgcgctccgcagcgtccccgtcggcggcgg 233
>gb|AY955493.2| Triticum aestivum Dof1 mRNA, complete cds Length = 1000 Score = 52.0 bits (26), Expect = 0.001 Identities = 86/106 (81%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| ||| |||||||| |||||||||||| ||||||||| | Sbjct: 283 gctactacaacaactacaacctgtcgcagccgcgccacttctgcaagagctgccgccggt 342 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| ||||||| |||| |||||||| || |||||||| Sbjct: 343 actggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 388
>dbj|AB028133.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1174 Score = 52.0 bits (26), Expect = 0.001 Identities = 78/94 (82%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 ||||||||||||||||| | || ||||| |||||||||||| ||||||| ||||| Sbjct: 552 gctacttcaacaactacaacgtcaaccagccgcgccacttctgcaaggcctgccaccgct 611 Query: 63 actggacccgcggcggcgcgttccggaacgtccc 96 ||||||| |||||||||| |||| |||||||| Sbjct: 612 actggacggccggcggcgcg-tccgcaacgtccc 644
>emb|AJ000991.1|HVBPBF Hordeum vulgare mRNA for DNA binding protein BPBF Length = 1318 Score = 50.1 bits (25), Expect = 0.004 Identities = 58/69 (84%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| | | || ||||| ||| |||||||| ||||||||||||| Sbjct: 176 gctactacaacaactacagcatgtcccagccgcgctacttctgcaaggcctgccgccgct 235 Query: 63 actggaccc 71 ||||||||| Sbjct: 236 actggaccc 244
>emb|X66076.1|ZMMNB1A Z.mays MNB1a mRNA for DNA-binding protein Length = 1225 Score = 48.1 bits (24), Expect = 0.015 Identities = 57/68 (83%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| | ||| ||||| |||||||||||| | ||||||||||| Sbjct: 265 gctactacaacaactacaacacctcccagccgcgccacttctgcaagggctgccgccgct 324 Query: 63 actggacc 70 |||||||| Sbjct: 325 actggacc 332
>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0657H12 Length = 142688 Score = 44.1 bits (22), Expect = 0.24 Identities = 85/106 (80%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||| |||||| ||| |||||||| | |||||||||| Sbjct: 47304 gctactacaacaactacagcctccagcagccgcgctacttctgcaagacgtgccgccgct 47245 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 ||||||| |||||| || |||| |||||||| || |||||||| Sbjct: 47244 actggacggagggcggctcgctccgcaacgtccccgtcggcggcgg 47199
>dbj|AK120810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014F11, full insert sequence Length = 1744 Score = 44.1 bits (22), Expect = 0.24 Identities = 85/106 (80%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||| |||||| ||| |||||||| | |||||||||| Sbjct: 374 gctactacaacaactacagcctccagcagccgcgctacttctgcaagacgtgccgccgct 433 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 ||||||| |||||| || |||| |||||||| || |||||||| Sbjct: 434 actggacggagggcggctcgctccgcaacgtccccgtcggcggcgg 479
>emb|AJ312297.1|HVU312297 Hordeum vulgare sed gene for dof zinc finger protein, exons 1-2 Length = 4727 Score = 44.1 bits (22), Expect = 0.24 Identities = 85/106 (80%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||| |||||| ||| |||||||| | |||||||||| Sbjct: 3696 gctactacaacaactacagcctccagcagccgcgctacttctgcaagacgtgccgccgct 3755 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| |||||| || |||| ||||| || || |||||||| Sbjct: 3756 actggaccgagggcggctcgctccgcaacgtgcccgtcggcggcgg 3801
>emb|AJ276357.1|HVU276357 Hordeum vulgare mRNA for dof zinc finger protein (sed gene) Length = 1555 Score = 44.1 bits (22), Expect = 0.24 Identities = 85/106 (80%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||| |||||| ||| |||||||| | |||||||||| Sbjct: 491 gctactacaacaactacagcctccagcagccgcgctacttctgcaagacgtgccgccgct 550 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||| |||||| || |||| ||||| || || |||||||| Sbjct: 551 actggaccgagggcggctcgctccgcaacgtgcccgtcggcggcgg 596
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 44.1 bits (22), Expect = 0.24 Identities = 28/30 (93%) Strand = Plus / Minus Query: 32 ccccgccacttctgccgcgcctgccgccgc 61 |||||| |||||||||||||||||| |||| Sbjct: 1469138 ccccgctacttctgccgcgcctgccaccgc 1469109
>dbj|AB028130.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1550 Score = 44.1 bits (22), Expect = 0.24 Identities = 85/106 (80%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| |||| |||||| ||| |||||||| | |||||||||| Sbjct: 502 gctactacaacaactacagcctccagcagccgcgctacttctgcaagacgtgccgccgct 561 Query: 63 actggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 ||||||| |||||| || |||| |||||||| || |||||||| Sbjct: 562 actggacggagggcggctcgctccgcaacgtccccgtcggcggcgg 607
>ref|XM_469066.1| Oryza sativa (japonica cultivar-group), mRNA Length = 477 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcttt 165 ||||||||||||||||||||| Sbjct: 219 ggcggcggcggcgggggcttt 239
>gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0092N01, complete sequence Length = 161741 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcttt 165 ||||||||||||||||||||| Sbjct: 147208 ggcggcggcggcgggggcttt 147228
>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete sequence Length = 130193 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcttt 165 ||||||||||||||||||||| Sbjct: 51476 ggcggcggcggcgggggcttt 51456
>gb|AE009369.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 139 of 187 of the complete sequence Length = 11923 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 cgtcatcgacgacttccgctt 224 ||||||||||||||||||||| Sbjct: 11811 cgtcatcgacgacttccgctt 11831
>gb|AE008244.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 48 of 187 of the complete sequence Length = 13803 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 cgtcatcgacgacttccgctt 224 ||||||||||||||||||||| Sbjct: 7750 cgtcatcgacgacttccgctt 7730
>emb|AJ223578.1|BRL223578 Branchiostoma lanceolatum mRNA for intermediate filament protein C2 Length = 3559 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcttt 165 ||||||||||||||||||||| Sbjct: 422 ggcggcggcggcgggggcttt 442
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 gatgctgcagaacggcggcgg 282 ||||||||||||||||||||| Sbjct: 2415560 gatgctgcagaacggcggcgg 2415540
>dbj|AP007231.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0535F09 Length = 175050 Score = 42.1 bits (21), Expect = 0.94 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 aaaccctagcaggcggcggcggcgg 158 ||||||||| ||||||||||||||| Sbjct: 83184 aaaccctaggaggcggcggcggcgg 83208 Score = 42.1 bits (21), Expect = 0.94 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 aaaccctagcaggcggcggcggcgg 158 ||||||||| ||||||||||||||| Sbjct: 3012 aaaccctaggaggcggcggcggcgg 3036
>dbj|AP006065.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0076I16 Length = 151711 Score = 42.1 bits (21), Expect = 0.94 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 aaaccctagcaggcggcggcggcgg 158 ||||||||| ||||||||||||||| Sbjct: 128659 aaaccctaggaggcggcggcggcgg 128683
>dbj|AK103330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125N05, full insert sequence Length = 564 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcttt 165 ||||||||||||||||||||| Sbjct: 177 ggcggcggcggcgggggcttt 197
>gb|AY111473.1| Zea mays CL830_1 mRNA sequence Length = 1414 Score = 42.1 bits (21), Expect = 0.94 Identities = 63/77 (81%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgct 62 |||||| |||||||||| ||| ||||||| ||| |||||||| | |||||||||| Sbjct: 201 gctactacaacaactacaacctgacgcagccgcgctacttctgcaagacgtgccgccgct 260 Query: 63 actggacccgcggcggc 79 ||||||| | ||||||| Sbjct: 261 actggacacacggcggc 277
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 gatgctgcagaacggcggcgg 282 ||||||||||||||||||||| Sbjct: 2435632 gatgctgcagaacggcggcgg 2435612
>ref|NM_129315.2| Arabidopsis thaliana DNA binding / transcription factor AT2G37590 mRNA, complete cds Length = 1263 Score = 40.1 bits (20), Expect = 3.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgc 46 ||||||||||||||||| |||| | || || |||||||||||| Sbjct: 453 gctacttcaacaactacagcctcactcaaccacgccacttctgc 496
>ref|XM_550218.1| Oryza sativa (japonica cultivar-group), mRNA Length = 702 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctgccgcgcctgccgccgct 62 |||||||||||||||||||| Sbjct: 378 ctgccgcgcctgccgccgct 359
>ref|XM_483599.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3633 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 acgacgtcatcgacgacttccgct 223 |||||||| ||||||||||||||| Sbjct: 233 acgacgtcctcgacgacttccgct 256
>ref|XM_483086.1| Oryza sativa (japonica cultivar-group), mRNA Length = 831 Score = 40.1 bits (20), Expect = 3.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 53 tgccgccgctactggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||||||||||||| || ||| || |||| |||||||| || |||||||| Sbjct: 271 tgccgccgctactggaccaagggtggcacgctccgcaacgtccccgtcggcggcgg 326
>ref|XM_482237.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1812 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggctt 164 |||||||||||||||||||| Sbjct: 434 ggcggcggcggcgggggctt 415
>ref|XM_470289.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1827 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cggcggcgcgttccggaacg 92 |||||||||||||||||||| Sbjct: 1413 cggcggcgcgttccggaacg 1432
>gb|AC145325.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0034E03 map near 50283S, complete sequence Length = 134074 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ctgccgcgcctgccgccgct 62 |||||||||||||||||||| Sbjct: 44161 ctgccgcgcctgccgccgct 44180
>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041C22, complete sequence Length = 161172 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctgccgcgcctgccgccgct 62 |||||||||||||||||||| Sbjct: 6432 ctgccgcgcctgccgccgct 6413
>gb|AC119897.8| Mus musculus chromosome 1, clone RP24-227F14, complete sequence Length = 195375 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agcaggcggcggcggcgggg 160 |||||||||||||||||||| Sbjct: 141367 agcaggcggcggcggcgggg 141386
>ref|XM_322074.1| Neurospora crassa OR74A predicted protein (NCU09971.1) partial mRNA Length = 1011 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ctagcaggcggcggcggcgg 158 |||||||||||||||||||| Sbjct: 791 ctagcaggcggcggcggcgg 772
>ref|XM_952996.1| Neurospora crassa OR74A hypothetical protein (NCU09971.1) partial mRNA Length = 1011 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ctagcaggcggcggcggcgg 158 |||||||||||||||||||| Sbjct: 791 ctagcaggcggcggcggcgg 772
>gb|DQ356948.1| Crocodilepox virus, complete genome Length = 190054 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 aggcggcggcggcgggggcttttt 167 ||||||||||||||| |||||||| Sbjct: 42550 aggcggcggcggcggtggcttttt 42573
>gb|AF521671.1| Homo sapiens SWI/SNF chromatin remodeling complex subunit OSA2 (OSA2) mRNA, partial cds Length = 7757 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 caggcggcggcggcgggggc 162 |||||||||||||||||||| Sbjct: 1153 caggcggcggcggcgggggc 1172
>ref|NM_017519.1| Homo sapiens AT rich interactive domain 1B (SWI1-like) (ARID1B), transcript variant 1, mRNA Length = 8246 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 caggcggcggcggcgggggc 162 |||||||||||||||||||| Sbjct: 1344 caggcggcggcggcgggggc 1363
>ref|NM_020732.2| Homo sapiens AT rich interactive domain 1B (SWI1-like) (ARID1B), transcript variant 2, mRNA Length = 8126 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 caggcggcggcggcgggggc 162 |||||||||||||||||||| Sbjct: 1344 caggcggcggcggcgggggc 1363
>ref|NM_175863.2| Homo sapiens AT rich interactive domain 1B (SWI1-like) (ARID1B), transcript variant 3, mRNA Length = 8087 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 caggcggcggcggcgggggc 162 |||||||||||||||||||| Sbjct: 1344 caggcggcggcggcgggggc 1363
>ref|NM_017142.1| Rattus norvegicus adenylate cyclase 8 (Adcy8), mRNA Length = 4601 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 aggcggcggcggcgggggct 163 |||||||||||||||||||| Sbjct: 941 aggcggcggcggcgggggct 960
>gb|AC126019.16| Medicago truncatula clone mth2-22p22, complete sequence Length = 130044 Score = 40.1 bits (20), Expect = 3.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgc 46 ||||||||||||||||| ||||| |||||| | ||||||||| Sbjct: 127313 gctacttcaacaactacagtctctctcagcccagacacttctgc 127270
>emb|AL732366.7| Human DNA sequence from clone RP11-393H10 on chromosome X Contains a novel gene (FLJ14503), the EIF1A gene for eukaryotic translation initiation factor 1A (EIF4C, EIF1AX, eIF-1A, eIF-4C), the 3' end of the RPS6KA3 gene for ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RSK, HU-2, HU-3, RSK2, MRX19, ISPK-1, MAPKAPK1B), a novel gene and three CpG islands, complete sequence Length = 187275 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggctt 164 |||||||||||||||||||| Sbjct: 17228 ggcggcggcggcgggggctt 17209
>emb|AL355297.20| Human DNA sequence from clone RP11-230C9 on chromosome 6 Contains the gene for DAN15 protein, a H3 histone, family 3A (H3F3A) (H3F3, H3.3A) pseudogene, the 5' end of the gene for BRG1-binding protein ELD/OSA1 (p250R KIAA1235) and four CpG islands, complete sequence Length = 169218 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 caggcggcggcggcgggggc 162 |||||||||||||||||||| Sbjct: 154173 caggcggcggcggcgggggc 154192
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 caggcggcggcggcgggggc 162 |||||||||||||||||||| Sbjct: 1103304 caggcggcggcggcgggggc 1103285
>emb|AJ549108.1|SOL549108 Spirodela oligorrhiza mRNA for calcium-dependent protein kinase (cdpk1 gene) Length = 2099 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 agcaggcggcggcggcgggggctt 164 ||||| |||||||||||||||||| Sbjct: 414 agcagccggcggcggcgggggctt 391
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 tagcaggcggcggcggcggg 159 |||||||||||||||||||| Sbjct: 7227 tagcaggcggcggcggcggg 7246
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 cagccccgccacttctgccg 48 |||||||||||||||||||| Sbjct: 2187131 cagccccgccacttctgccg 2187112
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 cagccccgccacttctgccg 48 |||||||||||||||||||| Sbjct: 2495107 cagccccgccacttctgccg 2495088
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cggcggcgcgttccggaacg 92 |||||||||||||||||||| Sbjct: 97348 cggcggcgcgttccggaacg 97367
>gb|AY091512.1| Triticum aestivum endo-1,4-beta-glucanase mRNA, complete cds Length = 2196 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggctt 164 |||||||||||||||||||| Sbjct: 323 ggcggcggcggcgggggctt 304
>gb|AC004684.3| Arabidopsis thaliana chromosome 2 clone F13M22 map ve018, complete sequence Length = 93845 Score = 40.1 bits (20), Expect = 3.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgc 46 ||||||||||||||||| |||| | || || |||||||||||| Sbjct: 25875 gctacttcaacaactacagcctcactcaaccacgccacttctgc 25918
>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence Length = 157450 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 caggcggcggcggcgggggc 162 |||||||||||||||||||| Sbjct: 100757 caggcggcggcggcgggggc 100738
>dbj|AK164092.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530011H03 product:hypothetical protein, full insert sequence Length = 2833 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 agcaggcggcggcggcgggg 160 |||||||||||||||||||| Sbjct: 618 agcaggcggcggcggcgggg 599
>dbj|AK039584.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330066M24 product:RAS GTPASE-ACTIVATING PROTEIN NGAP homolog [Homo sapiens], full insert sequence Length = 1920 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 agcaggcggcggcggcgggg 160 |||||||||||||||||||| Sbjct: 643 agcaggcggcggcggcgggg 624
>dbj|AK086812.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030002I04 product:RAS GTPASE-ACTIVATING PROTEIN NGAP homolog [Homo sapiens], full insert sequence Length = 1431 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 agcaggcggcggcggcgggg 160 |||||||||||||||||||| Sbjct: 269 agcaggcggcggcggcgggg 250
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 gccgctactggacccgcggcggcg 80 |||||| ||||||||||||||||| Sbjct: 41453 gccgcttctggacccgcggcggcg 41476
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctgccgcgcctgccgccgct 62 |||||||||||||||||||| Sbjct: 14782899 ctgccgcgcctgccgccgct 14782880
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 caggcggcggcggcgggggc 162 |||||||||||||||||||| Sbjct: 1103304 caggcggcggcggcgggggc 1103285
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 3.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 53 tgccgccgctactggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||||||||||||| |||||| | |||| |||||||| || |||||||| Sbjct: 18180534 tgccgccgctactggaccaagggcggctccctccgcaacgtccccgtcggcggcgg 18180589
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 200 acgacgtcatcgacgacttccgct 223 |||||||| ||||||||||||||| Sbjct: 27171789 acgacgtcctcgacgacttccgct 27171766 Score = 40.1 bits (20), Expect = 3.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 53 tgccgccgctactggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||||||||||||| || ||| || |||| |||||||| || |||||||| Sbjct: 24225862 tgccgccgctactggaccaagggtggcacgctccgcaacgtccccgtcggcggcgg 24225917 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggctt 164 |||||||||||||||||||| Sbjct: 18891234 ggcggcggcggcgggggctt 18891215
>gb|AF253515.1| Homo sapiens BAF250b subunit mRNA, complete cds Length = 6361 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 caggcggcggcggcgggggc 162 |||||||||||||||||||| Sbjct: 560 caggcggcggcggcgggggc 579
>emb|BX820837.1|CNS0A8PT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZC06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1314 Score = 40.1 bits (20), Expect = 3.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 3 gctacttcaacaactactccctctcgcagccccgccacttctgc 46 ||||||||||||||||| |||| | || || |||||||||||| Sbjct: 454 gctacttcaacaactacagcctcactcaaccacgccacttctgc 497
>dbj|AP004137.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1297_D02 Length = 104470 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggctt 164 |||||||||||||||||||| Sbjct: 57987 ggcggcggcggcgggggctt 57968
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ctagcaggcggcggcggcgg 158 |||||||||||||||||||| Sbjct: 71609 ctagcaggcggcggcggcgg 71590
>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0041E11 Length = 146335 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctgccgcgcctgccgccgct 62 |||||||||||||||||||| Sbjct: 64320 ctgccgcgcctgccgccgct 64301
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556A05 Length = 158189 Score = 40.1 bits (20), Expect = 3.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 53 tgccgccgctactggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||||||||||||| |||||| | |||| |||||||| || |||||||| Sbjct: 29258 tgccgccgctactggaccaagggcggctccctccgcaacgtccccgtcggcggcgg 29313
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 40.1 bits (20), Expect = 3.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 53 tgccgccgctactggacccgcggcggcgcgttccggaacgtccctgttggcggcgg 108 |||||||||||||||||| || ||| || |||| |||||||| || |||||||| Sbjct: 92201 tgccgccgctactggaccaagggtggcacgctccgcaacgtccccgtcggcggcgg 92256
>gb|AY092821.1| Homo sapiens FRAXG-associated short stature candidate gene, partial sequence Length = 6882 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggctt 164 |||||||||||||||||||| Sbjct: 1557 ggcggcggcggcgggggctt 1576
>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0049I08 Length = 144379 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ctagcaggcggcggcggcgg 158 |||||||||||||||||||| Sbjct: 134986 ctagcaggcggcggcggcgg 134967
>dbj|AP003743.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_E12 Length = 119691 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ctagcaggcggcggcggcgg 158 |||||||||||||||||||| Sbjct: 49464 ctagcaggcggcggcggcgg 49445
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaccctagcaggcggcggcg 154 |||||||||||||||||||| Sbjct: 161271 aaccctagcaggcggcggcg 161290
>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1521_G02 Length = 117964 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 200 acgacgtcatcgacgacttccgct 223 |||||||| ||||||||||||||| Sbjct: 72822 acgacgtcctcgacgacttccgct 72799
>gb|AY111630.1| Zea mays CL2150_1 mRNA sequence Length = 1313 Score = 40.1 bits (20), Expect = 3.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 35 cgccacttctgccgcgcctgccgccgctactggacc 70 |||||||||||| | ||||||||||||||||||| Sbjct: 297 cgccacttctgcaagggctgccgccgctactggacc 332
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gcggcggcgggggctttttc 168 |||||||||||||||||||| Sbjct: 863824 gcggcggcgggggctttttc 863843
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 caggcggcggcggcgggggc 162 |||||||||||||||||||| Sbjct: 1103301 caggcggcggcggcgggggc 1103282
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctgccgcgcctgccgccgct 62 |||||||||||||||||||| Sbjct: 14863336 ctgccgcgcctgccgccgct 14863317
>emb|AJ422133.1|PVI422133 Suid herpesvirus 1 strain Kaplan UL37 (partial), UL36 gene and UL35 gene (partial) Length = 10444 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 gccgctactggacccgcggcggcg 80 |||||| ||||||||||||||||| Sbjct: 1331 gccgcttctggacccgcggcggcg 1308
>emb|AJ318065.1|PVI318065 Pseudorabies virus ul39 gene (partial), ul36 gene, ul37 gene and ul38 gene (partial) Length = 6126 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 gccgctactggacccgcggcggcg 80 |||||| ||||||||||||||||| Sbjct: 6117 gccgcttctggacccgcggcggcg 6094
>emb|AJ001216.1|HSCGGE7 Homo sapiens DNA for (CGG)n trinucleotide repeat region, isolate E7 Length = 6170 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 caggcggcggcggcgggggc 162 |||||||||||||||||||| Sbjct: 1666 caggcggcggcggcgggggc 1647
>gb|L26986.1|RATACVIII Rat adenylyl cyclase type VIII mRNA, complete cds Length = 4601 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 aggcggcggcggcgggggct 163 |||||||||||||||||||| Sbjct: 941 aggcggcggcggcgggggct 960
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctgccgcgcctgccgccgct 62 |||||||||||||||||||| Sbjct: 88572 ctgccgcgcctgccgccgct 88553 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,880,358 Number of Sequences: 3902068 Number of extensions: 2880358 Number of successful extensions: 200059 Number of sequences better than 10.0: 158 Number of HSP's better than 10.0 without gapping: 174 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 184550 Number of HSP's gapped (non-prelim): 15308 length of query: 285 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 263 effective length of database: 17,147,199,772 effective search space: 4509713540036 effective search space used: 4509713540036 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
