ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast69f03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK100460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091N11, full insert sequence Length = 1327 Score = 351 bits (177), Expect = 1e-93 Identities = 279/313 (89%) Strand = Plus / Plus Query: 100 ctcggcacccaaggactggaggtgtctaagctggggttcgggtgcatgggcctcacaggc 159 |||||||||| || || |||||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 147 ctcggcacccggggcctagaggtgtccaagctggggttcgggtgcatggggctcacgggc 206 Query: 160 tcgtacaactcccccgtcgaggacgacgccggcgtcgccgtcgtcacgcacgccttccgc 219 |||||||||| || |||| ||||||||||||| ||||||| || |||||||||||||| Sbjct: 207 gcgtacaactcgccgctcgacgacgacgccggcgccgccgtcatcgcgcacgccttccgc 266 Query: 220 cgcggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctc 279 ||||||||||||||||||| |||||||||||||||||| |||| | | |||||||||||| Sbjct: 267 cgcggcgtcaccttcttcggcacctccgacgtctacggccccctcgccaacgagatcctc 326 Query: 280 ctcggcaaggcgctgaagcagctgccgcgggagaaggtgcaggtggccaccaagttcggg 339 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 327 ctcggcaaggcgctgaagcagctgccgcgggagcaggtgcaggtggccaccaagttcggg 386 Query: 340 atccagcgggacgcccagggcaagagcaccatctgcggccgcccggagtacgtccgcgcc 399 || | ||||| |||| | ||| | || || | |||||||| ||||||||||| |||||| Sbjct: 387 attcggcggggcgccgacggcgtgcgcgccgtgtgcggccggccggagtacgtgcgcgcc 446 Query: 400 tgctgcgaggcca 412 ||||||||||||| Sbjct: 447 tgctgcgaggcca 459
>ref|NM_192811.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 888 Score = 349 bits (176), Expect = 4e-93 Identities = 263/292 (90%) Strand = Plus / Plus Query: 121 gtgtctaagctggggttcgggtgcatgggcctcacaggctcgtacaactcccccgtcgag 180 ||||| ||||||||||||||||||||||| ||||| ||| |||||||||| || |||| Sbjct: 19 gtgtccaagctggggttcgggtgcatggggctcacgggcgcgtacaactcgccgctcgac 78 Query: 181 gacgacgccggcgtcgccgtcgtcacgcacgccttccgccgcggcgtcaccttcttcgac 240 ||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 79 gacgacgccggcgccgccgtcatcgcgcacgccttccgccgcggcgtcaccttcttcgac 138 Query: 241 acctccgacgtctacgggccccacactaacgagatcctcctcggcaaggcgctgaagcag 300 ||||||||||||||||| |||| | | ||||||||||||||||||||||||||||||||| Sbjct: 139 acctccgacgtctacggccccctcgccaacgagatcctcctcggcaaggcgctgaagcag 198 Query: 301 ctgccgcgggagaaggtgcaggtggccaccaagttcgggatccagcgggacgcccagggc 360 |||||||||||| |||||||||||||||||||||||||||| | ||||| |||| | ||| Sbjct: 199 ctgccgcgggagcaggtgcaggtggccaccaagttcgggattcggcggggcgccgacggc 258 Query: 361 aagagcaccatctgcggccgcccggagtacgtccgcgcctgctgcgaggcca 412 | || || | |||||||| ||||||||||| ||||||||||||||||||| Sbjct: 259 gtgcgcgccgtgtgcggccggccggagtacgtgcgcgcctgctgcgaggcca 310
>gb|AY105958.1| Zea mays PCO114043 mRNA sequence Length = 1434 Score = 297 bits (150), Expect = 1e-77 Identities = 282/326 (86%) Strand = Plus / Plus Query: 87 tccccgcgtcagcctcggcacccaaggactggaggtgtctaagctggggttcgggtgcat 146 ||||||||||| ||||||| ||| ||| | |||||||| |||||||||||||||||||| Sbjct: 112 tccccgcgtcaagctcggcatccagggattcgaggtgtccaagctggggttcgggtgcat 171 Query: 147 gggcctcacaggctcgtacaactcccccgtcgaggacgacgccggcgtcgccgtcgtcac 206 ||| || || ||| ||||||||||||| | || ||||| |||||| |||||||| || | Sbjct: 172 ggggctgacgggcgcgtacaactccccgctggacgacgaggccggcatcgccgtcatcgc 231 Query: 207 gcacgccttccgccgcggcgtcaccttcttcgacacctccgacgtctacgggccccacac 266 |||||| ||| ||||||| |||||||| ||||||||||||||||| |||||||||| ||| Sbjct: 232 gcacgctttcagccgcggagtcaccttgttcgacacctccgacgtatacgggcccctcac 291 Query: 267 taacgagatcctcctcggcaaggcgctgaagcagctgccgcgggagaaggtgcaggtggc 326 ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 292 caacgaaatcctcctcggcaaggcgctgaagcagctgccgcgggagcaggtgcaggtggc 351 Query: 327 caccaagttcgggatccagcgggacgcccagggcaagagcaccatctgcggccgcccgga 386 ||||||||||||||| | || |||| |||| | | ||| | |||||||| ||||| Sbjct: 352 caccaagttcgggatacggcatgacgagagcggcacgcggaccgtgtgcggccggccgga 411 Query: 387 gtacgtccgcgcctgctgcgaggcca 412 |||||| ||||||||||||||||||| Sbjct: 412 gtacgttcgcgcctgctgcgaggcca 437
>gb|AY109071.1| Zea mays PCO122073 mRNA sequence Length = 1331 Score = 238 bits (120), Expect = 1e-59 Identities = 222/256 (86%) Strand = Plus / Plus Query: 86 ttccccgcgtcagcctcggcacccaaggactggaggtgtctaagctggggttcgggtgca 145 |||||||||||| ||||||| ||| || || |||||||| ||||||||||||||||||| Sbjct: 172 ttccccgcgtcaagctcggcatccaggggcttgaggtgtcgaagctggggttcgggtgca 231 Query: 146 tgggcctcacaggctcgtacaactcccccgtcgaggacgacgccggcgtcgccgtcgtca 205 |||| ||||| ||| | |||||| | || ||| ||||| |||| | |||||||||| Sbjct: 232 tggggctcacgggcacctacaacgcgccgctcggcgacgaggccgtggccgccgtcgtcg 291 Query: 206 cgcacgccttccgccgcggcgtcaccttcttcgacacctccgacgtctacgggccccaca 265 ||||||||||||||||||| |||||||||||||||||||||| | ||||||||||| || Sbjct: 292 cgcacgccttccgccgcgggatcaccttcttcgacacctccgatgcctacgggccccgca 351 Query: 266 ctaacgagatcctcctcggcaaggcgctgaagcagctgccgcgggagaaggtgcaggtgg 325 | ||||||| |||||| || |||||||| |||||||||||| ||||| |||||||||||| Sbjct: 352 ccaacgagaccctcctggggaaggcgctcaagcagctgccgagggagcaggtgcaggtgg 411 Query: 326 ccaccaagttcgggat 341 |||||||||||||||| Sbjct: 412 ccaccaagttcgggat 427 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 385 gagtacgtccgcgcctgctgcgaggcca 412 |||||||| ||||||||||||||||||| Sbjct: 468 gagtacgtacgcgcctgctgcgaggcca 495
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 220 bits (111), Expect = 3e-54 Identities = 156/171 (91%) Strand = Plus / Minus Query: 119 aggtgtctaagctggggttcgggtgcatgggcctcacaggctcgtacaactcccccgtcg 178 ||||||| ||||||||||||||||||||||| ||||| ||| |||||||||| || ||| Sbjct: 24577894 aggtgtccaagctggggttcgggtgcatggggctcacgggcgcgtacaactcgccgctcg 24577835 Query: 179 aggacgacgccggcgtcgccgtcgtcacgcacgccttccgccgcggcgtcaccttcttcg 238 | ||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 24577834 acgacgacgccggcgccgccgtcatcgcgcacgccttccgccgcggcgtcaccttcttcg 24577775 Query: 239 acacctccgacgtctacgggccccacactaacgagatcctcctcggcaagg 289 ||||||||||||||||||| |||| | | |||||||||||||||||||||| Sbjct: 24577774 acacctccgacgtctacggccccctcgccaacgagatcctcctcggcaagg 24577724 Score = 139 bits (70), Expect = 8e-30 Identities = 112/126 (88%) Strand = Plus / Minus Query: 287 aggcgctgaagcagctgccgcgggagaaggtgcaggtggccaccaagttcgggatccagc 346 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || Sbjct: 24577631 aggcgctgaagcagctgccgcgggagcaggtgcaggtggccaccaagttcgggattcggc 24577572 Query: 347 gggacgcccagggcaagagcaccatctgcggccgcccggagtacgtccgcgcctgctgcg 406 ||| |||| | ||| | || || | |||||||| ||||||||||| ||||||||||||| Sbjct: 24577571 ggggcgccgacggcgtgcgcgccgtgtgcggccggccggagtacgtgcgcgcctgctgcg 24577512 Query: 407 aggcca 412 |||||| Sbjct: 24577511 aggcca 24577506
>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1040D09 Length = 148102 Score = 220 bits (111), Expect = 3e-54 Identities = 156/171 (91%) Strand = Plus / Minus Query: 119 aggtgtctaagctggggttcgggtgcatgggcctcacaggctcgtacaactcccccgtcg 178 ||||||| ||||||||||||||||||||||| ||||| ||| |||||||||| || ||| Sbjct: 3857 aggtgtccaagctggggttcgggtgcatggggctcacgggcgcgtacaactcgccgctcg 3798 Query: 179 aggacgacgccggcgtcgccgtcgtcacgcacgccttccgccgcggcgtcaccttcttcg 238 | ||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 3797 acgacgacgccggcgccgccgtcatcgcgcacgccttccgccgcggcgtcaccttcttcg 3738 Query: 239 acacctccgacgtctacgggccccacactaacgagatcctcctcggcaagg 289 ||||||||||||||||||| |||| | | |||||||||||||||||||||| Sbjct: 3737 acacctccgacgtctacggccccctcgccaacgagatcctcctcggcaagg 3687 Score = 139 bits (70), Expect = 8e-30 Identities = 112/126 (88%) Strand = Plus / Minus Query: 287 aggcgctgaagcagctgccgcgggagaaggtgcaggtggccaccaagttcgggatccagc 346 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || Sbjct: 3594 aggcgctgaagcagctgccgcgggagcaggtgcaggtggccaccaagttcgggattcggc 3535 Query: 347 gggacgcccagggcaagagcaccatctgcggccgcccggagtacgtccgcgcctgctgcg 406 ||| |||| | ||| | || || | |||||||| ||||||||||| ||||||||||||| Sbjct: 3534 ggggcgccgacggcgtgcgcgccgtgtgcggccggccggagtacgtgcgcgcctgctgcg 3475 Query: 407 aggcca 412 |||||| Sbjct: 3474 aggcca 3469
>gb|U77346.1|ZMU77346 Zea mays lethal leaf-spot 1 (lls-1) gene, partial cds; and unknown gene Length = 7129 Score = 115 bits (58), Expect = 1e-22 Identities = 109/126 (86%) Strand = Plus / Minus Query: 287 aggcgctgaagcagctgccgcgggagaaggtgcaggtggccaccaagttcgggatccagc 346 ||||||||||||||||| |||||||| |||||||||||||||||||||||| ||| |||| Sbjct: 292 aggcgctgaagcagctgtcgcgggagcaggtgcaggtggccaccaagttcgagatacagc 233 Query: 347 gggacgcccagggcaagagcaccatctgcggccgcccggagtacgtccgcgcctgctgcg 406 | |||| |||| | | ||| | |||||||| ||||||||||| ||||||||||||| Sbjct: 232 gtgacgagagcggcacgcggaccgtgtgcggccggccggagtacgttcgcgcctgctgcg 173 Query: 407 aggcca 412 |||||| Sbjct: 172 aggcca 167
>ref|NM_196521.1| Oryza sativa (japonica cultivar-group) putative polyprotein (OSJNBa0006I13.8), mRNA Length = 1305 Score = 113 bits (57), Expect = 5e-22 Identities = 180/221 (81%) Strand = Plus / Plus Query: 118 gaggtgtctaagctggggttcgggtgcatgggcctcacaggctcgtacaactcccccgtc 177 |||||||| ||||| ||||||||||||||||||||||| ||| ||||| | || ||| Sbjct: 49 gaggtgtccaagctcgggttcgggtgcatgggcctcaccggcgtctacaatgcgccggtc 108 Query: 178 gaggacgacgccggcgtcgccgtcgtcacgcacgccttccgccgcggcgtcaccttcttc 237 | || || | ||||||||||||||||| || || ||| |||||||||||||||| Sbjct: 109 gccgaggaagacggcgtcgccgtcgtcaggcgagcgttcgaggccggcgtcaccttcttc 168 Query: 238 gacacctccgacgtctacgggccccacactaacgagatcctcctcggcaaggcgctgaag 297 ||||||||||| | |||||| || ||||| ||||| |||| || || ||||| |||||| Sbjct: 169 gacacctccgatgcctacggcccgcacaccaacgaagtccttctggggaaggcactgaag 228 Query: 298 cagctgccgcgggagaaggtgcaggtggccaccaagttcgg 338 || || || || |||||||| || ||||||||||||||||| Sbjct: 229 caactacctcgtgagaaggtacaagtggccaccaagttcgg 269
>dbj|AK099316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145C18, full insert sequence Length = 1334 Score = 113 bits (57), Expect = 5e-22 Identities = 180/221 (81%) Strand = Plus / Plus Query: 118 gaggtgtctaagctggggttcgggtgcatgggcctcacaggctcgtacaactcccccgtc 177 |||||||| ||||| ||||||||||||||||||||||| ||| ||||| | || ||| Sbjct: 130 gaggtgtccaagctcgggttcgggtgcatgggcctcaccggcgtctacaatgcgccggtc 189 Query: 178 gaggacgacgccggcgtcgccgtcgtcacgcacgccttccgccgcggcgtcaccttcttc 237 | || || | ||||||||||||||||| || || ||| |||||||||||||||| Sbjct: 190 gccgaggaagacggcgtcgccgtcgtcaggcgagcgttcgaggccggcgtcaccttcttc 249 Query: 238 gacacctccgacgtctacgggccccacactaacgagatcctcctcggcaaggcgctgaag 297 ||||||||||| | |||||| || ||||| ||||| |||| || || ||||| |||||| Sbjct: 250 gacacctccgatgcctacggcccgcacaccaacgaagtccttctggggaaggcactgaag 309 Query: 298 cagctgccgcgggagaaggtgcaggtggccaccaagttcgg 338 || || || || |||||||| || ||||||||||||||||| Sbjct: 310 caactacctcgtgagaaggtacaagtggccaccaagttcgg 350
>dbj|AK064344.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-H09, full insert sequence Length = 1355 Score = 113 bits (57), Expect = 5e-22 Identities = 180/221 (81%) Strand = Plus / Plus Query: 118 gaggtgtctaagctggggttcgggtgcatgggcctcacaggctcgtacaactcccccgtc 177 |||||||| ||||| ||||||||||||||||||||||| ||| ||||| | || ||| Sbjct: 145 gaggtgtccaagctcgggttcgggtgcatgggcctcaccggcgtctacaatgcgccggtc 204 Query: 178 gaggacgacgccggcgtcgccgtcgtcacgcacgccttccgccgcggcgtcaccttcttc 237 | || || | ||||||||||||||||| || || ||| |||||||||||||||| Sbjct: 205 gccgaggaagacggcgtcgccgtcgtcaggcgagcgttcgaggccggcgtcaccttcttc 264 Query: 238 gacacctccgacgtctacgggccccacactaacgagatcctcctcggcaaggcgctgaag 297 ||||||||||| | |||||| || ||||| ||||| |||| || || ||||| |||||| Sbjct: 265 gacacctccgatgcctacggcccgcacaccaacgaagtccttctggggaaggcactgaag 324 Query: 298 cagctgccgcgggagaaggtgcaggtggccaccaagttcgg 338 || || || || |||||||| || ||||||||||||||||| Sbjct: 325 caactacctcgtgagaaggtacaagtggccaccaagttcgg 365
>ref|XM_471940.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1038 Score = 105 bits (53), Expect = 1e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 ||||||||| |||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 153 cggcgtcacgttcttcgacacctccgacctctacggcccccacaccaacgaggtcctcct 212 Query: 282 cggcaaggcgctg 294 ||||||||||||| Sbjct: 213 cggcaaggcgctg 225
>dbj|AK104524.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-G01, full insert sequence Length = 1407 Score = 105 bits (53), Expect = 1e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 ||||||||| |||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 207 cggcgtcacgttcttcgacacctccgacctctacggcccccacaccaacgaggtcctcct 266 Query: 282 cggcaaggcgctg 294 ||||||||||||| Sbjct: 267 cggcaaggcgctg 279
>dbj|AK068652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160A22, full insert sequence Length = 1448 Score = 105 bits (53), Expect = 1e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 ||||||||| |||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 208 cggcgtcacgttcttcgacacctccgacctctacggcccccacaccaacgaggtcctcct 267 Query: 282 cggcaaggcgctg 294 ||||||||||||| Sbjct: 268 cggcaaggcgctg 280
>ref|XM_471943.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1056 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 |||||||||| || |||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 168 cggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagctcctcct 227 Query: 282 cggcaaggcgctg 294 ||||||||||||| Sbjct: 228 cggcaaggcgctg 240
>dbj|AK099774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095E15, full insert sequence Length = 1374 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 |||||||||| || |||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 204 cggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagctcctcct 263 Query: 282 cggcaaggcgctg 294 ||||||||||||| Sbjct: 264 cggcaaggcgctg 276
>dbj|AK061686.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B01, full insert sequence Length = 1366 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 |||||||||| || |||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 203 cggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagctcctcct 262 Query: 282 cggcaaggcgctg 294 ||||||||||||| Sbjct: 263 cggcaaggcgctg 275
>emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008A08, complete sequence Length = 130521 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 ||||||||| |||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 89073 cggcgtcacgttcttcgacacctccgacctctacggcccccacaccaacgaggtcctcct 89132 Query: 282 cggcaagg 289 |||||||| Sbjct: 89133 cggcaagg 89140 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 |||||||||| || |||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 115952 cggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagctcctcct 116011 Query: 282 cggcaagg 289 |||||||| Sbjct: 116012 cggcaagg 116019 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 |||||||||| | |||||||||||||| | ||||| |||||||| |||||| ||||||| Sbjct: 124666 cggcgtcacccacctcgacacctccgacatgtacggcccccacaccaacgagctcctcct 124725 Query: 282 cggcaagg 289 |||||||| Sbjct: 124726 cggcaagg 124733 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 |||||||||| || |||||||| ||||| |||||||||| ||| | |||||| |||||| Sbjct: 104876 cggcgtcaccctcctcgacaccgccgacatctacgggccgcacgccaacgaggccctcct 104935 Query: 282 cggcaagg 289 |||||||| Sbjct: 104936 cggcaagg 104943 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 gggagaaggtgcaggtggccaccaagttcg 337 ||||||||||| |||||||||| ||||||| Sbjct: 124860 gggagaaggtggaggtggccacgaagttcg 124889
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 ||||||||| |||||||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 15902508 cggcgtcacgttcttcgacacctccgacctctacggcccccacaccaacgaggtcctcct 15902567 Query: 282 cggcaagg 289 |||||||| Sbjct: 15902568 cggcaagg 15902575 Score = 89.7 bits (45), Expect = 7e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 223 ggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcctc 282 |||||||||||| ||||||||||||||||||||||||| ||||| |||||| | ||| || Sbjct: 16015220 ggcgtcaccttcctcgacacctccgacgtctacgggccgcacaccaacgaggtgctcgtc 16015279 Query: 283 ggcaaggcg 291 ||||||||| Sbjct: 16015280 ggcaaggcg 16015288 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 |||||||||| || |||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 15929387 cggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagctcctcct 15929446 Query: 282 cggcaagg 289 |||||||| Sbjct: 15929447 cggcaagg 15929454 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 |||||||||| | |||||||||||||| | ||||| |||||||| |||||| ||||||| Sbjct: 15938101 cggcgtcacccacctcgacacctccgacatgtacggcccccacaccaacgagctcctcct 15938160 Query: 282 cggcaagg 289 |||||||| Sbjct: 15938161 cggcaagg 15938168 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 |||||||||| || |||||||| ||||| |||||||||| ||| | |||||| |||||| Sbjct: 15918311 cggcgtcaccctcctcgacaccgccgacatctacgggccgcacgccaacgaggccctcct 15918370 Query: 282 cggcaagg 289 |||||||| Sbjct: 15918371 cggcaagg 15918378 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 314 aggtgcaggtggccaccaagttcgg 338 ||||||||||||||||||||||||| Sbjct: 16015323 aggtgcaggtggccaccaagttcgg 16015347 Score = 46.1 bits (23), Expect = 0.089 Identities = 29/31 (93%) Strand = Plus / Minus Query: 173 ccgtcgaggacgacgccggcgtcgccgtcgt 203 ||||||||||||||||||||| ||| ||||| Sbjct: 19009174 ccgtcgaggacgacgccggcgacgctgtcgt 19009144 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 gggagaaggtgcaggtggccaccaagttcg 337 ||||||||||| |||||||||| ||||||| Sbjct: 15938295 gggagaaggtggaggtggccacgaagttcg 15938324 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 tcaccttcttcgacacctccgacg 250 ||||||||||||||| |||||||| Sbjct: 35323487 tcaccttcttcgacagctccgacg 35323464
>ref|XM_471950.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1068 Score = 89.7 bits (45), Expect = 7e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 223 ggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcctc 282 |||||||||||| ||||||||||||||||||||||||| ||||| |||||| | ||| || Sbjct: 178 ggcgtcaccttcctcgacacctccgacgtctacgggccgcacaccaacgaggtgctcgtc 237 Query: 283 ggcaaggcg 291 ||||||||| Sbjct: 238 ggcaaggcg 246 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 314 aggtgcaggtggccaccaagttcgg 338 ||||||||||||||||||||||||| Sbjct: 281 aggtgcaggtggccaccaagttcgg 305
>emb|AL606625.3|OSJN00039 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032I19, complete sequence Length = 145383 Score = 89.7 bits (45), Expect = 7e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 223 ggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcctc 282 |||||||||||| ||||||||||||||||||||||||| ||||| |||||| | ||| || Sbjct: 99433 ggcgtcaccttcctcgacacctccgacgtctacgggccgcacaccaacgaggtgctcgtc 99492 Query: 283 ggcaaggcg 291 ||||||||| Sbjct: 99493 ggcaaggcg 99501 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 |||||||||| || |||||||||||||| ||||||| |||||||| |||||| ||||||| Sbjct: 13600 cggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagctcctcct 13659 Query: 282 cggcaagg 289 |||||||| Sbjct: 13660 cggcaagg 13667 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 |||||||||| | |||||||||||||| | ||||| |||||||| |||||| ||||||| Sbjct: 22314 cggcgtcacccacctcgacacctccgacatgtacggcccccacaccaacgagctcctcct 22373 Query: 282 cggcaagg 289 |||||||| Sbjct: 22374 cggcaagg 22381 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 |||||||||| || |||||||| ||||| |||||||||| ||| | |||||| |||||| Sbjct: 2524 cggcgtcaccctcctcgacaccgccgacatctacgggccgcacgccaacgaggccctcct 2583 Query: 282 cggcaagg 289 |||||||| Sbjct: 2584 cggcaagg 2591 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 314 aggtgcaggtggccaccaagttcgg 338 ||||||||||||||||||||||||| Sbjct: 99536 aggtgcaggtggccaccaagttcgg 99560 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 308 gggagaaggtgcaggtggccaccaagttcg 337 ||||||||||| |||||||||| ||||||| Sbjct: 22508 gggagaaggtggaggtggccacgaagttcg 22537
>dbj|AK103553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132F18, full insert sequence Length = 1236 Score = 89.7 bits (45), Expect = 7e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 223 ggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcctc 282 |||||||||||| ||||||||||||||||||||||||| ||||| |||||| | ||| || Sbjct: 230 ggcgtcaccttcctcgacacctccgacgtctacgggccgcacaccaacgaggtgctcgtc 289 Query: 283 ggcaaggcg 291 ||||||||| Sbjct: 290 ggcaaggcg 298 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 314 aggtgcaggtggccaccaagttcgg 338 ||||||||||||||||||||||||| Sbjct: 333 aggtgcaggtggccaccaagttcgg 357
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 75.8 bits (38), Expect = 1e-10 Identities = 125/154 (81%) Strand = Plus / Plus Query: 119 aggtgtctaagctggggttcgggtgcatgggcctcacaggctcgtacaactcccccgtcg 178 ||||||| ||||| ||||||||||||||||||||||| ||| ||||| | || |||| Sbjct: 14217740 aggtgtccaagctcgggttcgggtgcatgggcctcaccggcgtctacaatgcgccggtcg 14217799 Query: 179 aggacgacgccggcgtcgccgtcgtcacgcacgccttccgccgcggcgtcaccttcttcg 238 || || | ||||||||||||||||| || || ||| ||||||||||||||||| Sbjct: 14217800 ccgaggaagacggcgtcgccgtcgtcaggcgagcgttcgaggccggcgtcaccttcttcg 14217859 Query: 239 acacctccgacgtctacgggccccacactaacga 272 |||||||||| | |||||| || ||||| ||||| Sbjct: 14217860 acacctccgatgcctacggcccgcacaccaacga 14217893 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 287 aggcgctgaagcagctgccgcgggagaaggtgcaggtggccaccaagttcgg 338 |||| |||||||| || || || |||||||| || ||||||||||||||||| Sbjct: 14219135 aggcactgaagcaactacctcgtgagaaggtacaagtggccaccaagttcgg 14219186 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 gtcgaggacgacgccggcgtcgcc 198 ||||||||||||| |||||||||| Sbjct: 17333982 gtcgaggacgacgacggcgtcgcc 17333959
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 75.8 bits (38), Expect = 1e-10 Identities = 125/154 (81%) Strand = Plus / Plus Query: 119 aggtgtctaagctggggttcgggtgcatgggcctcacaggctcgtacaactcccccgtcg 178 ||||||| ||||| ||||||||||||||||||||||| ||| ||||| | || |||| Sbjct: 89813 aggtgtccaagctcgggttcgggtgcatgggcctcaccggcgtctacaatgcgccggtcg 89872 Query: 179 aggacgacgccggcgtcgccgtcgtcacgcacgccttccgccgcggcgtcaccttcttcg 238 || || | ||||||||||||||||| || || ||| ||||||||||||||||| Sbjct: 89873 ccgaggaagacggcgtcgccgtcgtcaggcgagcgttcgaggccggcgtcaccttcttcg 89932 Query: 239 acacctccgacgtctacgggccccacactaacga 272 |||||||||| | |||||| || ||||| ||||| Sbjct: 89933 acacctccgatgcctacggcccgcacaccaacga 89966 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 287 aggcgctgaagcagctgccgcgggagaaggtgcaggtggccaccaagttcgg 338 |||| |||||||| || || || |||||||| || ||||||||||||||||| Sbjct: 91208 aggcactgaagcaactacctcgtgagaaggtacaagtggccaccaagttcgg 91259
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 75.8 bits (38), Expect = 1e-10 Identities = 125/154 (81%) Strand = Plus / Plus Query: 119 aggtgtctaagctggggttcgggtgcatgggcctcacaggctcgtacaactcccccgtcg 178 ||||||| ||||| ||||||||||||||||||||||| ||| ||||| | || |||| Sbjct: 14225982 aggtgtccaagctcgggttcgggtgcatgggcctcaccggcgtctacaatgcgccggtcg 14226041 Query: 179 aggacgacgccggcgtcgccgtcgtcacgcacgccttccgccgcggcgtcaccttcttcg 238 || || | ||||||||||||||||| || || ||| ||||||||||||||||| Sbjct: 14226042 ccgaggaagacggcgtcgccgtcgtcaggcgagcgttcgaggccggcgtcaccttcttcg 14226101 Query: 239 acacctccgacgtctacgggccccacactaacga 272 |||||||||| | |||||| || ||||| ||||| Sbjct: 14226102 acacctccgatgcctacggcccgcacaccaacga 14226135 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 287 aggcgctgaagcagctgccgcgggagaaggtgcaggtggccaccaagttcgg 338 |||| |||||||| || || || |||||||| || ||||||||||||||||| Sbjct: 14227377 aggcactgaagcaactacctcgtgagaaggtacaagtggccaccaagttcgg 14227428 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 gtcgaggacgacgccggcgtcgcc 198 ||||||||||||| |||||||||| Sbjct: 17343022 gtcgaggacgacgacggcgtcgcc 17342999
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 220 cgcggcgtcaccttcttcgacacctccgacgtctacgggccc 261 |||||||||||||||||||||||| |||| |||||||||||| Sbjct: 519476 cgcggcgtcaccttcttcgacaccgccgaagtctacgggccc 519435
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 |||||| |||||||||||||| |||| |||||||| || ||| |||||||||||||| Sbjct: 278386 cggcgttaccttcttcgacactgccgaagtctacggtcctttcaccaacgagatcctcct 278327 Query: 282 cggcaaggcgctgaagc 298 ||| || |||||||||| Sbjct: 278326 cggaaaagcgctgaagc 278310
>ref|XM_471942.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1107 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 |||||||||| || |||||||| ||||| |||||||||| ||| | |||||| |||||| Sbjct: 168 cggcgtcaccctcctcgacaccgccgacatctacgggccgcacgccaacgaggccctcct 227 Query: 282 cggcaag 288 ||||||| Sbjct: 228 cggcaag 234
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 |||||||| ||||||||||||| | || |||||||| || || ||||||||||| || Sbjct: 4002012 cggcgtcaacttcttcgacaccgcggaagtctacggcccttacgagaacgagatcctgct 4002071 Query: 282 cggcaaggcgctgaa 296 ||||||||||||||| Sbjct: 4002072 cggcaaggcgctgaa 4002086
>gb|AF486581.1| Uncultured bacterium aminoglycoside 3'-N-acetyltransferase gene, complete cds Length = 38269 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 226 gtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcctcggc 285 ||||| |||||||||||| |||| ||||| ||||| | | |||||||| ||| ||||| Sbjct: 29817 gtcacgttcttcgacaccgccgaggtctatgggccgttcgccaacgagattctcgtcggc 29876 Query: 286 aaggcgctgaagc 298 ||||||||||||| Sbjct: 29877 aaggcgctgaagc 29889
>gb|AY026946.3| Streptomyces venezuelae adenylating enzyme CmlK, alkylhalidase CmlS, and aldo/keto reductase CmlT genes, complete cds; and unknown genes Length = 6213 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacga 272 ||||||||||||| |||||||| |||| ||||||||||| |||| ||||| Sbjct: 3362 cggcgtcaccttcctcgacaccgccgagatctacgggccctacaccaacga 3412
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 220 cgcggcgtcaccttcttcgacacctccgacgtctacgg 257 ||||| |||||||||||||||||| |||| |||||||| Sbjct: 5090106 cgcggtgtcaccttcttcgacaccgccgaagtctacgg 5090069 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Minus Query: 220 cgcggcgtcaccttcttcgacacctccgacgtctacgg 257 |||||||| ||||||||||||||| |||| | |||||| Sbjct: 6108797 cgcggcgtgaccttcttcgacaccgccgaggcctacgg 6108760
>emb|X56267.1|NTAUX115 N.tabacum auxin-induced mRNA (pCNT115) Length = 1309 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 250 gtctacgggccccacactaacgagatcctcctcggcaaggc 290 ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 215 gtctatgggccccacactaacgaaatcctacttggcaaggc 255
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 227 tcaccttcttcgacacctccgacgtctacggg 258 ||||||||||||||||| ||||||| |||||| Sbjct: 1948207 tcaccttcttcgacaccgccgacgtgtacggg 1948238
>gb|AY973615.1| Manihot esculenta aldo/keto reductase AKR mRNA, complete cds Length = 1267 Score = 48.1 bits (24), Expect = 0.023 Identities = 60/72 (83%) Strand = Plus / Plus Query: 222 cggcgtcaccttcttcgacacctccgacgtctacgggccccacactaacgagatcctcct 281 ||||||||| ||||| || |||||||||||||| || || || || || ||||| || || Sbjct: 214 cggcgtcactttctttgatacctccgacgtctatggacctcataccaatgagattcttct 273 Query: 282 cggcaaggcgct 293 ||||||||||| Sbjct: 274 gggcaaggcgct 285
>ref|XM_472278.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 585 Score = 46.1 bits (23), Expect = 0.089 Identities = 29/31 (93%) Strand = Plus / Plus Query: 173 ccgtcgaggacgacgccggcgtcgccgtcgt 203 ||||||||||||||||||||| ||| ||||| Sbjct: 301 ccgtcgaggacgacgccggcgacgctgtcgt 331
>emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044M19, complete sequence Length = 188317 Score = 46.1 bits (23), Expect = 0.089 Identities = 29/31 (93%) Strand = Plus / Minus Query: 173 ccgtcgaggacgacgccggcgtcgccgtcgt 203 ||||||||||||||||||||| ||| ||||| Sbjct: 101099 ccgtcgaggacgacgccggcgacgctgtcgt 101069
>gb|AE005963.1| Caulobacter crescentus CB15 section 289 of 359 of the complete genome Length = 11104 Score = 46.1 bits (23), Expect = 0.089 Identities = 32/35 (91%) Strand = Plus / Minus Query: 223 ggcgtcaccttcttcgacacctccgacgtctacgg 257 ||||| ||||||||||||||| |||| |||||||| Sbjct: 8738 ggcgtgaccttcttcgacaccgccgaggtctacgg 8704
>gb|AC069544.9| Homo sapiens chromosome 10 clone RP11-398C13, complete sequence Length = 214866 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 308 gggagaaggtgcaggtggccacc 330 ||||||||||||||||||||||| Sbjct: 172443 gggagaaggtgcaggtggccacc 172465
>dbj|AK119999.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-H05, full insert sequence Length = 730 Score = 46.1 bits (23), Expect = 0.089 Identities = 29/31 (93%) Strand = Plus / Plus Query: 173 ccgtcgaggacgacgccggcgtcgccgtcgt 203 ||||||||||||||||||||| ||| ||||| Sbjct: 286 ccgtcgaggacgacgccggcgacgctgtcgt 316
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 46.1 bits (23), Expect = 0.089 Identities = 32/35 (91%) Strand = Plus / Minus Query: 223 ggcgtcaccttcttcgacacctccgacgtctacgg 257 |||||||||||||||||||| ||||| ||||||| Sbjct: 2258388 ggcgtcaccttcttcgacactgccgacatctacgg 2258354
>ref|XM_366759.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02835.4) partial mRNA Length = 876 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 tcgaggacgacgccggcgtcgc 197 |||||||||||||||||||||| Sbjct: 193 tcgaggacgacgccggcgtcgc 172
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 cggcgtcaccttcttcgacacc 243 |||||||||||||||||||||| Sbjct: 230017 cggcgtcaccttcttcgacacc 229996
>ref|XM_465720.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1299 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 gaggacgacgccggcgtcgccgtcg 202 ||||||||||||| ||||||||||| Sbjct: 567 gaggacgacgccgccgtcgccgtcg 543
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 229 accttcttcgacacctccgacgtctacgg 257 |||||||||||||| ||||||||||||| Sbjct: 30164 accttcttcgacacggccgacgtctacgg 30192
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 gaggacgacgccggcgtcgccgtcg 202 ||||||||||||| ||||||||||| Sbjct: 17024371 gaggacgacgccgccgtcgccgtcg 17024347 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 aggacgacgccggcgtcgccgtcg 202 |||||| ||||||||||||||||| Sbjct: 24995514 aggacgccgccggcgtcgccgtcg 24995491
>ref|XM_234720.3| PREDICTED: Rattus norvegicus dynein, axonemal, heavy polypeptide 11 (Dnah11), mRNA Length = 13735 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ggagaaggtgcaggtggccac 329 ||||||||||||||||||||| Sbjct: 2558 ggagaaggtgcaggtggccac 2578
>dbj|AP004837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0483C08 Length = 143855 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 gaggacgacgccggcgtcgccgtcg 202 ||||||||||||| ||||||||||| Sbjct: 5744 gaggacgacgccgccgtcgccgtcg 5720
>dbj|AP005322.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0677G01 Length = 137031 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 gaggacgacgccggcgtcgccgtcg 202 ||||||||||||| ||||||||||| Sbjct: 75627 gaggacgacgccgccgtcgccgtcg 75603
>gb|AE005007.1| Halobacterium sp. NRC-1 section 38 of 170 of the complete genome Length = 10293 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 171 ccccgtcgaggacgacgccggcgtc 195 ||||||||| ||||||||||||||| Sbjct: 212 ccccgtcgacgacgacgccggcgtc 236
>emb|AJ937765.1| Uncultured candidate division OP8 bacterium fosmid clone b3cf1.2.f09 Length = 38920 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 gcacgccttccgccgcggcgt 227 ||||||||||||||||||||| Sbjct: 7741 gcacgccttccgccgcggcgt 7761
>ref|XM_474462.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 837 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 tcaccttcttcgacacctccgacg 250 ||||||||||||||| |||||||| Sbjct: 496 tcaccttcttcgacagctccgacg 473
>ref|XM_466843.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2502 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 aggacgacgccggcgtcgccgtcg 202 |||||| ||||||||||||||||| Sbjct: 268 aggacgccgccggcgtcgccgtcg 291
>gb|AE009416.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 186 of 187 of the complete sequence Length = 12088 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 cttcttcgacacctccgacgtcta 254 ||||||||||||| |||||||||| Sbjct: 2280 cttcttcgacaccgccgacgtcta 2303
>gb|AE008198.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 2 of 187 of the complete sequence Length = 11292 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 cttcttcgacacctccgacgtcta 254 ||||||||||||| |||||||||| Sbjct: 6359 cttcttcgacaccgccgacgtcta 6336
>ref|XM_383298.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03122.1) partial mRNA Length = 1218 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 gccatggcgcaaacctcatc 83 |||||||||||||||||||| Sbjct: 308 gccatggcgcaaacctcatc 327
>emb|X79242.5|PDSOX Paracoccus denitrificans ORF1, ORF2, and shxV, shxW, soxX, soxY, soxZ, soxA, soxB, soxC, soxD, soxE, soxF, soxG and soxH genes Length = 13155 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cgccggcgtcgccgtcgtca 205 |||||||||||||||||||| Sbjct: 10168 cgccggcgtcgccgtcgtca 10187
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcctgcgcttccgtcccgtg 23 |||||||||||||||||||| Sbjct: 124880 gcctgcgcttccgtcccgtg 124861
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 tcaccttcttcgacacctccgacg 250 ||||||||||||||| |||||||| Sbjct: 31804 tcaccttcttcgacagctccgacg 31827
>gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 genomic sequence, complete sequence Length = 163279 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 gtcgaggacgacgccggcgtcgcc 198 ||||||||||||| |||||||||| Sbjct: 38297 gtcgaggacgacgacggcgtcgcc 38320
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence Length = 642517 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 273 gatcctcctcggcaaggcgctgaagcag 300 ||||||||||||||||| |||| ||||| Sbjct: 578173 gatcctcctcggcaaggtgctggagcag 578200
>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0042D01 Length = 148305 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 aggacgacgccggcgtcgccgtcg 202 |||||| ||||||||||||||||| Sbjct: 8502 aggacgccgccggcgtcgccgtcg 8479
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 aggacgacgccggcgtcgccgtcg 202 |||||| ||||||||||||||||| Sbjct: 156797 aggacgccgccggcgtcgccgtcg 156774
>dbj|AK102817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N04, full insert sequence Length = 2504 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 aggacgacgccggcgtcgccgtcg 202 |||||| ||||||||||||||||| Sbjct: 270 aggacgccgccggcgtcgccgtcg 293
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 175 gtcgaggacgacgccggcgtcgccgtcg 202 |||||||||||| |||||||||||||| Sbjct: 1935649 gtcgaggacgaccacggcgtcgccgtcg 1935676
>dbj|AK061001.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F12, full insert sequence Length = 1291 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 tcaccttcttcgacacctccgacg 250 ||||||||||||||| |||||||| Sbjct: 583 tcaccttcttcgacagctccgacg 560
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 tcaccttcttcgacacctccgacg 250 ||||||||||||||| |||||||| Sbjct: 119332 tcaccttcttcgacagctccgacg 119309
>gb|U22382.1|YSCL9324 Saccharomyces cerevisiae chromosome XII cosmid 9324 Length = 21732 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatctgcggccgcccggag 387 |||||||||||||||||||| Sbjct: 6107 ccatctgcggccgcccggag 6088
>dbj|D10226.1|YSCYL16B Yeast genomic DNA for ribosomal protein YL16, complete cds Length = 1594 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ccatctgcggccgcccggag 387 |||||||||||||||||||| Sbjct: 181 ccatctgcggccgcccggag 162 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,539,761 Number of Sequences: 3902068 Number of extensions: 2539761 Number of successful extensions: 55360 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54248 Number of HSP's gapped (non-prelim): 1105 length of query: 412 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 390 effective length of database: 17,147,199,772 effective search space: 6687407911080 effective search space used: 6687407911080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
