ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast69e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1S3TC2_MOUSE (Q80VA5) SH3 domain and tetratricopeptide repeats-co... 31 1.3
2DCMC_HUMAN (O95822) Malonyl-CoA decarboxylase, mitochondrial pre... 28 8.3

>S3TC2_MOUSE (Q80VA5) SH3 domain and tetratricopeptide repeats-containing|
           protein 2
          Length = 1289

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 314 DSFLPGDLNARAFSVDERAQLYSPALDRSGEC 409
           DS  P   N+  FS +ER+ L+SP  +R  EC
Sbjct: 328 DSCSPMSKNSAFFSDEERSSLWSPGSERKAEC 359



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>DCMC_HUMAN (O95822) Malonyl-CoA decarboxylase, mitochondrial precursor (EC|
           4.1.1.9) (MCD)
          Length = 493

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 231 SPVPGGSARRLGLRNSIQTNFGDDYVFQIASCQEI 335
           SP+PG +   LGL NS     G + +F  + C+EI
Sbjct: 329 SPIPGFTKWLLGLLNSQTKEHGRNELFTDSECKEI 363


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,186,812
Number of Sequences: 219361
Number of extensions: 433888
Number of successful extensions: 1113
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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