ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast69e07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 174 bits (88), Expect = 1e-40 Identities = 176/205 (85%), Gaps = 3/205 (1%) Strand = Plus / Plus Query: 215 gacggcgtcgtgatcagcgaggcggaccggcagggcctgcaggccatcaagcaggacctc 274 ||||||||||| |||||| |||| ||| |||||||| |||||||||||||| |||||| Sbjct: 358496 gacggcgtcgtcatcagccaggccgactaccagggcctacaggccatcaagcacgacctc 358555 Query: 275 tccgacccccgcggcttcctccgctcctggaacgacaccggcctcggcggcgcctgctcg 334 ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 358556 tccgacccctacgccttcctccgctcctggaacgacaccggcctcggcg---cctgctcc 358612 Query: 335 ggggcctggacggngatcaagtgcgtcaacggcaacgtggtcgccatcacgctcccctgg 394 || || ||| | |||||||||||| | ||||| || ||||||||||| ||||| ||| Sbjct: 358613 ggcgcatgggtcggcatcaagtgcgtccagggcaaggtcgtcgccatcaccctcccatgg 358672 Query: 395 cgcggcctcgctggcaccctctccg 419 ||||||||||| ||||||||||||| Sbjct: 358673 cgcggcctcgccggcaccctctccg 358697
>dbj|AK109643.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-G09, full insert sequence Length = 1938 Score = 174 bits (88), Expect = 1e-40 Identities = 176/205 (85%), Gaps = 3/205 (1%) Strand = Plus / Plus Query: 215 gacggcgtcgtgatcagcgaggcggaccggcagggcctgcaggccatcaagcaggacctc 274 ||||||||||| |||||| |||| ||| |||||||| |||||||||||||| |||||| Sbjct: 183 gacggcgtcgtcatcagccaggccgactaccagggcctacaggccatcaagcacgacctc 242 Query: 275 tccgacccccgcggcttcctccgctcctggaacgacaccggcctcggcggcgcctgctcg 334 ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 243 tccgacccctacgccttcctccgctcctggaacgacaccggcctcggcg---cctgctcc 299 Query: 335 ggggcctggacggngatcaagtgcgtcaacggcaacgtggtcgccatcacgctcccctgg 394 || || ||| | |||||||||||| | ||||| || ||||||||||| ||||| ||| Sbjct: 300 ggcgcatgggtcggcatcaagtgcgtccagggcaaggtcgtcgccatcaccctcccatgg 359 Query: 395 cgcggcctcgctggcaccctctccg 419 ||||||||||| ||||||||||||| Sbjct: 360 cgcggcctcgccggcaccctctccg 384
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 174 bits (88), Expect = 1e-40 Identities = 176/205 (85%), Gaps = 3/205 (1%) Strand = Plus / Plus Query: 215 gacggcgtcgtgatcagcgaggcggaccggcagggcctgcaggccatcaagcaggacctc 274 ||||||||||| |||||| |||| ||| |||||||| |||||||||||||| |||||| Sbjct: 358496 gacggcgtcgtcatcagccaggccgactaccagggcctacaggccatcaagcacgacctc 358555 Query: 275 tccgacccccgcggcttcctccgctcctggaacgacaccggcctcggcggcgcctgctcg 334 ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 358556 tccgacccctacgccttcctccgctcctggaacgacaccggcctcggcg---cctgctcc 358612 Query: 335 ggggcctggacggngatcaagtgcgtcaacggcaacgtggtcgccatcacgctcccctgg 394 || || ||| | |||||||||||| | ||||| || ||||||||||| ||||| ||| Sbjct: 358613 ggcgcatgggtcggcatcaagtgcgtccagggcaaggtcgtcgccatcaccctcccatgg 358672 Query: 395 cgcggcctcgctggcaccctctccg 419 ||||||||||| ||||||||||||| Sbjct: 358673 cgcggcctcgccggcaccctctccg 358697
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 174 bits (88), Expect = 1e-40 Identities = 176/205 (85%), Gaps = 3/205 (1%) Strand = Plus / Plus Query: 215 gacggcgtcgtgatcagcgaggcggaccggcagggcctgcaggccatcaagcaggacctc 274 ||||||||||| |||||| |||| ||| |||||||| |||||||||||||| |||||| Sbjct: 65814 gacggcgtcgtcatcagccaggccgactaccagggcctacaggccatcaagcacgacctc 65873 Query: 275 tccgacccccgcggcttcctccgctcctggaacgacaccggcctcggcggcgcctgctcg 334 ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 65874 tccgacccctacgccttcctccgctcctggaacgacaccggcctcggcg---cctgctcc 65930 Query: 335 ggggcctggacggngatcaagtgcgtcaacggcaacgtggtcgccatcacgctcccctgg 394 || || ||| | |||||||||||| | ||||| || ||||||||||| ||||| ||| Sbjct: 65931 ggcgcatgggtcggcatcaagtgcgtccagggcaaggtcgtcgccatcaccctcccatgg 65990 Query: 395 cgcggcctcgctggcaccctctccg 419 ||||||||||| ||||||||||||| Sbjct: 65991 cgcggcctcgccggcaccctctccg 66015
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 159 bits (80), Expect = 9e-36 Identities = 174/205 (84%), Gaps = 3/205 (1%) Strand = Plus / Plus Query: 215 gacggcgtcgtgatcagcgaggcggaccggcagggcctgcaggccatcaagcaggacctc 274 ||||||||||| |||||| ||||||| |||||||| |||||||||||||| |||||| Sbjct: 417457 gacggcgtcgtcatcagccaggcggattaccagggcctacaggccatcaagcacgacctc 417516 Query: 275 tccgacccccgcggcttcctccgctcctggaacgacaccggcctcggcggcgcctgctcg 334 |||||||| || ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 417517 accgacccctacgccttcctccgctcctggaacgacaccggcctcggcg---cctgctcc 417573 Query: 335 ggggcctggacggngatcaagtgcgtcaacggcaacgtggtcgccatcacgctcccctgg 394 || || ||| | |||||||||||| | ||||| || ||||||||||| ||||| ||| Sbjct: 417574 ggcgcatgggtcggcatcaagtgcgtccagggcaaggtcgtcgccatcaccctcccatgg 417633 Query: 395 cgcggcctcgctggcaccctctccg 419 ||||||||||| ||||| ||||||| Sbjct: 417634 cgcggcctcgccggcactctctccg 417658 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 171 cgtcgccggcagccgccgccgcc 193 ||||||||||||||||||||||| Sbjct: 25076542 cgtcgccggcagccgccgccgcc 25076520 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 ttcccgtcgccggcagccgccgccgcc 193 |||||||||||||| |||||||||||| Sbjct: 20897040 ttcccgtcgccggcggccgccgccgcc 20897066
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 159 bits (80), Expect = 9e-36 Identities = 174/205 (84%), Gaps = 3/205 (1%) Strand = Plus / Plus Query: 215 gacggcgtcgtgatcagcgaggcggaccggcagggcctgcaggccatcaagcaggacctc 274 ||||||||||| |||||| ||||||| |||||||| |||||||||||||| |||||| Sbjct: 417457 gacggcgtcgtcatcagccaggcggattaccagggcctacaggccatcaagcacgacctc 417516 Query: 275 tccgacccccgcggcttcctccgctcctggaacgacaccggcctcggcggcgcctgctcg 334 |||||||| || ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 417517 accgacccctacgccttcctccgctcctggaacgacaccggcctcggcg---cctgctcc 417573 Query: 335 ggggcctggacggngatcaagtgcgtcaacggcaacgtggtcgccatcacgctcccctgg 394 || || ||| | |||||||||||| | ||||| || ||||||||||| ||||| ||| Sbjct: 417574 ggcgcatgggtcggcatcaagtgcgtccagggcaaggtcgtcgccatcaccctcccatgg 417633 Query: 395 cgcggcctcgctggcaccctctccg 419 ||||||||||| ||||| ||||||| Sbjct: 417634 cgcggcctcgccggcactctctccg 417658 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 171 cgtcgccggcagccgccgccgcc 193 ||||||||||||||||||||||| Sbjct: 25004744 cgtcgccggcagccgccgccgcc 25004722 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 ttcccgtcgccggcagccgccgccgcc 193 |||||||||||||| |||||||||||| Sbjct: 20823254 ttcccgtcgccggcggccgccgccgcc 20823280
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 159 bits (80), Expect = 9e-36 Identities = 174/205 (84%), Gaps = 3/205 (1%) Strand = Plus / Plus Query: 215 gacggcgtcgtgatcagcgaggcggaccggcagggcctgcaggccatcaagcaggacctc 274 ||||||||||| |||||| ||||||| |||||||| |||||||||||||| |||||| Sbjct: 150508 gacggcgtcgtcatcagccaggcggattaccagggcctacaggccatcaagcacgacctc 150567 Query: 275 tccgacccccgcggcttcctccgctcctggaacgacaccggcctcggcggcgcctgctcg 334 |||||||| || ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 150568 accgacccctacgccttcctccgctcctggaacgacaccggcctcggcg---cctgctcc 150624 Query: 335 ggggcctggacggngatcaagtgcgtcaacggcaacgtggtcgccatcacgctcccctgg 394 || || ||| | |||||||||||| | ||||| || ||||||||||| ||||| ||| Sbjct: 150625 ggcgcatgggtcggcatcaagtgcgtccagggcaaggtcgtcgccatcaccctcccatgg 150684 Query: 395 cgcggcctcgctggcaccctctccg 419 ||||||||||| ||||| ||||||| Sbjct: 150685 cgcggcctcgccggcactctctccg 150709
>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141089 Score = 159 bits (80), Expect = 9e-36 Identities = 174/205 (84%), Gaps = 3/205 (1%) Strand = Plus / Minus Query: 215 gacggcgtcgtgatcagcgaggcggaccggcagggcctgcaggccatcaagcaggacctc 274 ||||||||||| |||||| ||||||| |||||||| |||||||||||||| |||||| Sbjct: 129315 gacggcgtcgtcatcagccaggcggattaccagggcctacaggccatcaagcacgacctc 129256 Query: 275 tccgacccccgcggcttcctccgctcctggaacgacaccggcctcggcggcgcctgctcg 334 |||||||| || ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 129255 accgacccctacgccttcctccgctcctggaacgacaccggcctcggcg---cctgctcc 129199 Query: 335 ggggcctggacggngatcaagtgcgtcaacggcaacgtggtcgccatcacgctcccctgg 394 || || ||| | |||||||||||| | ||||| || ||||||||||| ||||| ||| Sbjct: 129198 ggcgcatgggtcggcatcaagtgcgtccagggcaaggtcgtcgccatcaccctcccatgg 129139 Query: 395 cgcggcctcgctggcaccctctccg 419 ||||||||||| ||||| ||||||| Sbjct: 129138 cgcggcctcgccggcactctctccg 129114
>dbj|AK073061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033021A01, full insert sequence Length = 2391 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 355 gtgcgtcaacggcaacgtggtcgccatcacgctcccctggcgcggcctcgctggcaccct 414 ||||||| | ||||| || ||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 1 gtgcgtccagggcaaggtcgtcgccatcaccctcccatggcgcggcctcgccggcaccct 60 Query: 415 ctccg 419 ||||| Sbjct: 61 ctccg 65
>ref|XM_550604.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1086 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 256 ggccatcaagcaggacctctccgacccccgcggcttcctccg 297 |||||||||||| |||||| |||||||| |||||||||||| Sbjct: 687 ggccatcaagcacgacctcaccgacccctacggcttcctccg 728
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 256 ggccatcaagcaggacctctccgacccccgcggcttcctccg 297 |||||||||||| |||||| |||||||| |||||||||||| Sbjct: 81432 ggccatcaagcacgacctcaccgacccctacggcttcctccg 81473
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 256 ggccatcaagcaggacctctccgacccccgcggcttcctccg 297 |||||||||||| |||||| |||||||| |||||||||||| Sbjct: 1761216 ggccatcaagcacgacctcaccgacccctacggcttcctccg 1761257 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 gccggcagccgccgccgcccaccg 198 |||||| ||||||||||||||||| Sbjct: 4698386 gccggccgccgccgccgcccaccg 4698409
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 256 ggccatcaagcaggacctctccgacccccgcggcttcctccg 297 |||||||||||| |||||| |||||||| |||||||||||| Sbjct: 86365 ggccatcaagcacgacctcaccgacccctacggcttcctccg 86406
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 217 cggcgtcgtgatcagcgaggcgg 239 ||||||||||||||||||||||| Sbjct: 2985479 cggcgtcgtgatcagcgaggcgg 2985457
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 178 ggcagccgccgccgcccaccgccacca 204 ||||||||||||||||||||| ||||| Sbjct: 1972489 ggcagccgccgccgcccaccggcacca 1972515
>emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb0046O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 101075 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 ttcccgtcgccggcagccgccgccgcc 193 |||||||||||||| |||||||||||| Sbjct: 98767 ttcccgtcgccggcggccgccgccgcc 98793
>emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306_H03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121563 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 171 cgtcgccggcagccgccgccgcc 193 ||||||||||||||||||||||| Sbjct: 54937 cgtcgccggcagccgccgccgcc 54959
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 ttcccgtcgccggcagccgccgccgcc 193 |||||||||||||| |||||||||||| Sbjct: 805 ttcccgtcgccggcggccgccgccgcc 831
>dbj|AK069805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030L10, full insert sequence Length = 1829 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 ttcccgtcgccggcagccgccgccgcc 193 |||||||||||||| |||||||||||| Sbjct: 84 ttcccgtcgccggcggccgccgccgcc 110
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 167 ttcccgtcgccggcagccgccgccgcc 193 |||||||||||||| |||||||||||| Sbjct: 61955 ttcccgtcgccggcggccgccgccgcc 61929
>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146686 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 171 cgtcgccggcagccgccgccgcc 193 ||||||||||||||||||||||| Sbjct: 30629 cgtcgccggcagccgccgccgcc 30651
>ref|NM_192692.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 999 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 184 cgccgccgcccaccgccaccatcccg 209 |||||||||||||||||||| ||||| Sbjct: 682 cgccgccgcccaccgccaccgtcccg 657
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 cgtcgccggcagccgccgccgc 192 |||||||||||||||||||||| Sbjct: 2701538 cgtcgccggcagccgccgccgc 2701559
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 184 cgccgccgcccaccgccaccatcccg 209 |||||||||||||||||||| ||||| Sbjct: 23883617 cgccgccgcccaccgccaccgtcccg 23883642 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 177 cggcagccgccgccgcccaccgccacca 204 |||| |||||||||||||||| |||||| Sbjct: 16310320 cggccgccgccgccgcccacccccacca 16310347
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0704D04 Length = 147638 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 184 cgccgccgcccaccgccaccatcccg 209 |||||||||||||||||||| ||||| Sbjct: 30021 cgccgccgcccaccgccaccgtcccg 30046
>emb|AJ323709.1|HSA323709 Homo sapiens genomic sequence surrounding NotI site, clone NB6-315S Length = 940 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 gcagccgccgccgcccaccgcc 200 |||||||||||||||||||||| Sbjct: 365 gcagccgccgccgcccaccgcc 344
>emb|CR762341.2| Xenopus tropicalis finished cDNA, clone TGas077c21 Length = 1801 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 140 ctgcactgctgctgcgctccgctgct 165 ||||||||||||||| |||||||||| Sbjct: 25 ctgcactgctgctgctctccgctgct 50
>gb|AY464141.1| Gallus gallus EKN1 mRNA, complete cds Length = 1829 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 cggccggcgccatgccgctgcggct 105 |||||||||||||||||||| |||| Sbjct: 84 cggccggcgccatgccgctgtggct 108
>ref|XM_482894.1| Oryza sativa (japonica cultivar-group), mRNA Length = 741 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 ccgccgccgcccaccgccacc 203 ||||||||||||||||||||| Sbjct: 670 ccgccgccgcccaccgccacc 690
>emb|Y14570.1|STCY14570 Simian T-cell lymphotropic virus type 2, complete proviral genome Length = 8855 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 cctgcaggccatcaagcagga 270 ||||||||||||||||||||| Sbjct: 1217 cctgcaggccatcaagcagga 1237
>gb|BT023793.1| Drosophila melanogaster GH11127 full insert cDNA Length = 4366 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 cggcagccgccgccgcccacc 197 ||||||||||||||||||||| Sbjct: 1573 cggcagccgccgccgcccacc 1593
>ref|NM_166109.1| Drosophila melanogaster fusilli CG8205-RB, transcript variant B (fus), mRNA Length = 4349 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 cggcagccgccgccgcccacc 197 ||||||||||||||||||||| Sbjct: 1574 cggcagccgccgccgcccacc 1594
>ref|NM_166108.1| Drosophila melanogaster fusilli CG8205-RF, transcript variant F (fus), mRNA Length = 5245 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 cggcagccgccgccgcccacc 197 ||||||||||||||||||||| Sbjct: 2467 cggcagccgccgccgcccacc 2487
>ref|NM_166107.1| Drosophila melanogaster fusilli CG8205-RE, transcript variant E (fus), mRNA Length = 5515 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 cggcagccgccgccgcccacc 197 ||||||||||||||||||||| Sbjct: 2737 cggcagccgccgccgcccacc 2757
>ref|NM_079952.2| Drosophila melanogaster fusilli CG8205-RD, transcript variant D (fus), mRNA Length = 5258 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 cggcagccgccgccgcccacc 197 ||||||||||||||||||||| Sbjct: 2480 cggcagccgccgccgcccacc 2500
>gb|AC099005.1| Drosophila melanogaster, chromosome 2R, region 52B-52C, BAC clone BACR11I22, complete sequence Length = 173165 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 cggcagccgccgccgcccacc 197 ||||||||||||||||||||| Sbjct: 44634 cggcagccgccgccgcccacc 44614
>emb|CR389904.1| Gallus gallus finished cDNA, clone ChEST271n13 Length = 1133 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 cggccggcgccatgccgctgcggct 105 |||||||||||||||||||| |||| Sbjct: 62 cggccggcgccatgccgctgtggct 86
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 ggcctgcaggccatcaagcag 268 ||||||||||||||||||||| Sbjct: 2648389 ggcctgcaggccatcaagcag 2648369
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 ccgccgccgcccaccgccacc 203 ||||||||||||||||||||| Sbjct: 23187365 ccgccgccgcccaccgccacc 23187345 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 gcagccgccgccgcccaccgc 199 ||||||||||||||||||||| Sbjct: 10271305 gcagccgccgccgcccaccgc 10271285 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 gccgccgccgcccaccgccaccat 205 ||||||||||||| |||||||||| Sbjct: 22976170 gccgccgccgcccgccgccaccat 22976147
>gb|AF321979.1|AF321979 Drosophila melanogaster fusilli mRNA, complete cds Length = 5247 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 cggcagccgccgccgcccacc 197 ||||||||||||||||||||| Sbjct: 2443 cggcagccgccgccgcccacc 2463
>ref|NM_001008674.1| Gallus gallus dyslexia susceptibility 1 candidate 1 (DYX1C1), mRNA Length = 1829 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 cggccggcgccatgccgctgcggct 105 |||||||||||||||||||| |||| Sbjct: 84 cggccggcgccatgccgctgtggct 108
>gb|BT003299.1| Drosophila melanogaster GH20047 full insert cDNA Length = 4366 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 cggcagccgccgccgcccacc 197 ||||||||||||||||||||| Sbjct: 1573 cggcagccgccgccgcccacc 1593
>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461F06 Length = 147891 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 ccgccgccgcccaccgccacc 203 ||||||||||||||||||||| Sbjct: 110464 ccgccgccgcccaccgccacc 110444
>dbj|AP004650.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1540_G08 Length = 126263 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 gcagccgccgccgcccaccgc 199 ||||||||||||||||||||| Sbjct: 77328 gcagccgccgccgcccaccgc 77308
>gb|AC008407.4|AC008407 Homo sapiens chromosome 5 clone CTC-278A2, complete sequence Length = 78849 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 51 cctgcttcacttcgtgtacagactgcaga 79 |||||| |||||| ||||||||||||||| Sbjct: 52180 cctgctacacttcctgtacagactgcaga 52152
>gb|AC008369.1|AC008369 Drosophila melanogaster, chromosome 2R, region 52A4-52B4, P1 clones BACR48C01 and DS08592, complete sequence Length = 192366 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 cggcagccgccgccgcccacc 197 ||||||||||||||||||||| Sbjct: 176286 cggcagccgccgccgcccacc 176266
>gb|AE003810.3| Drosophila melanogaster chromosome 2R, section 40 of 73 of the complete sequence Length = 271178 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 cggcagccgccgccgcccacc 197 ||||||||||||||||||||| Sbjct: 253644 cggcagccgccgccgcccacc 253624
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 cgccggcagccgccgccgcc 193 |||||||||||||||||||| Sbjct: 1983717 cgccggcagccgccgccgcc 1983736
>ref|XM_482854.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1565 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 gccgccgccgcccaccgccaccat 205 ||||||||||||| |||||||||| Sbjct: 182 gccgccgccgcccgccgccaccat 159
>ref|XM_464434.1| Oryza sativa (japonica cultivar-group), mRNA Length = 921 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 gccggcagccgccgccgccc 194 |||||||||||||||||||| Sbjct: 697 gccggcagccgccgccgccc 678
>ref|NM_184579.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1770 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 177 cggcagccgccgccgcccaccgccacca 204 |||| |||||||||||||||| |||||| Sbjct: 34 cggccgccgccgccgcccacccccacca 7
>ref|XM_477279.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1536 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 170 ccgtcgccggcagccgccgccgcccacc 197 ||||||||||| ||||||||| |||||| Sbjct: 38 ccgtcgccggccgccgccgcctcccacc 65
>ref|XM_473406.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 363 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 cagccgccgccgcccaccgccacc 203 |||||||||||||| ||||||||| Sbjct: 289 cagccgccgccgcctaccgccacc 312
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 ggccggcgccatgccgctgc 101 |||||||||||||||||||| Sbjct: 1656650 ggccggcgccatgccgctgc 1656631
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 accggccggcgccatgccgc 98 |||||||||||||||||||| Sbjct: 485111 accggccggcgccatgccgc 485130
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 ccgccgccgcccaccgccaccatc 206 ||||||||| |||||||||||||| Sbjct: 30264333 ccgccgccggccaccgccaccatc 30264310 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ccgccgcccaccgccaccat 205 |||||||||||||||||||| Sbjct: 11076275 ccgccgcccaccgccaccat 11076294
>gb|AC183107.3| Pan troglodytes BAC clone CH251-566P2 from chromosome 16, complete sequence Length = 194054 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 cgccggcagccgccgccgcc 193 |||||||||||||||||||| Sbjct: 73625 cgccggcagccgccgccgcc 73644
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 cagccgccgccgcccaccgccacc 203 |||||||||||||| ||||||||| Sbjct: 125816 cagccgccgccgcctaccgccacc 125839
>ref|XM_845928.1| PREDICTED: Canis familiaris similar to Syntaxin-18, transcript variant 1 (LOC609342), mRNA Length = 1022 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ccgccgccgcccaccgccac 202 |||||||||||||||||||| Sbjct: 103 ccgccgccgcccaccgccac 84
>ref|XM_857786.1| PREDICTED: Canis familiaris similar to Syntaxin-18, transcript variant 4 (LOC609342), mRNA Length = 1007 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ccgccgccgcccaccgccac 202 |||||||||||||||||||| Sbjct: 103 ccgccgccgcccaccgccac 84
>ref|XM_857768.1| PREDICTED: Canis familiaris similar to Syntaxin-18, transcript variant 3 (LOC609342), mRNA Length = 1024 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ccgccgccgcccaccgccac 202 |||||||||||||||||||| Sbjct: 102 ccgccgccgcccaccgccac 83
>ref|XM_857747.1| PREDICTED: Canis familiaris similar to Syntaxin-18, transcript variant 2 (LOC609342), mRNA Length = 943 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ccgccgccgcccaccgccac 202 |||||||||||||||||||| Sbjct: 102 ccgccgccgcccaccgccac 83
>ref|NM_130802.1| Homo sapiens multiple endocrine neoplasia I (MEN1), transcript variant e1D, mRNA Length = 3174 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agccgccgccgcccaccgcc 200 |||||||||||||||||||| Sbjct: 471 agccgccgccgcccaccgcc 490
>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence Length = 167588 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ccgccgcccaccgccaccat 205 |||||||||||||||||||| Sbjct: 56847 ccgccgcccaccgccaccat 56828
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 accggccggcgccatgccgc 98 |||||||||||||||||||| Sbjct: 1804483 accggccggcgccatgccgc 1804502
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence Length = 133967 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 cagccgccgccgcccaccgccacc 203 |||||||||||||| ||||||||| Sbjct: 42374 cagccgccgccgcctaccgccacc 42397
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 accggcagggcctgcaggcc 259 |||||||||||||||||||| Sbjct: 3877706 accggcagggcctgcaggcc 3877687
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gccgccgccgcccaccgcca 201 |||||||||||||||||||| Sbjct: 4214964 gccgccgccgcccaccgcca 4214983 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gccgccgccgcccaccgcca 201 |||||||||||||||||||| Sbjct: 3902987 gccgccgccgcccaccgcca 3903006
>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete sequence Length = 130359 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 ccgccgccgcccaccgccaccatc 206 ||||||||| |||||||||||||| Sbjct: 56013 ccgccgccggccaccgccaccatc 55990
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 cgtcgccggcagccgccgccgccc 194 |||||||||| ||||||||||||| Sbjct: 639143 cgtcgccggctgccgccgccgccc 639120
>dbj|AK030904.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830452G14 product:PR/SET DOMAIN-CONTAINING PROTEIN 07 homolog [Homo sapiens], full insert sequence Length = 2715 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 ccgtcgccggcagccgccgccgcc 193 ||||||||| |||||||||||||| Sbjct: 140 ccgtcgccgccagccgccgccgcc 117
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 accggccggcgccatgccgc 98 |||||||||||||||||||| Sbjct: 979566 accggccggcgccatgccgc 979547
>gb|AC148705.1| Macaca mulatta Major Histocompatibility Complex MMU348N13, complete sequence Length = 186491 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 176 ccggcagccgccgccgcccaccgccacc 203 ||||||||||||||||| | |||||||| Sbjct: 170757 ccggcagccgccgccgcgcgccgccacc 170730
>gb|AC148704.1| Macaca mulatta Major Histocompatibility Complex BAC MMU337E21, complete sequence Length = 147539 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 176 ccggcagccgccgccgcccaccgccacc 203 ||||||||||||||||| | |||||||| Sbjct: 72227 ccggcagccgccgccgcgcgccgccacc 72200
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 cagccgccgccgcccaccgccacc 203 |||||||||||||| ||||||||| Sbjct: 27391220 cagccgccgccgcctaccgccacc 27391243
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 170 ccgtcgccggcagccgccgccgcccacc 197 ||||||||||| ||||||||| |||||| Sbjct: 8509613 ccgtcgccggccgccgccgcctcccacc 8509640
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 ccgccgccgcccaccgccaccatc 206 ||||||||| |||||||||||||| Sbjct: 30355755 ccgccgccggccaccgccaccatc 30355732 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ccgccgcccaccgccaccat 205 |||||||||||||||||||| Sbjct: 11073038 ccgccgcccaccgccaccat 11073057
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cgccgccgcccaccgccacc 203 |||||||||||||||||||| Sbjct: 7474519 cgccgccgcccaccgccacc 7474500 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 gccggcagccgccgccgccc 194 |||||||||||||||||||| Sbjct: 5202315 gccggcagccgccgccgccc 5202334
>dbj|AB103463.1| Streptomyces sp. AM-7161 medermycin biosynthetic gene cluster (med-ORF1 - 30) and ORF P - Z , partial and complete cds Length = 36202 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 cgcggccgccctgctgctcg 137 |||||||||||||||||||| Sbjct: 30229 cgcggccgccctgctgctcg 30248
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 176 ccggcagccgccgccgcccaccgccacc 203 ||||||||||||||||| | |||||||| Sbjct: 1555296 ccggcagccgccgccgcgcgccgccacc 1555323
>gb|DQ317423.1| Leersia virginica KNOTTED1-like homeodomain protein mRNA, partial cds Length = 1080 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 cgccggcagccgccgccgcc 193 |||||||||||||||||||| Sbjct: 211 cgccggcagccgccgccgcc 192
>dbj|AP006237.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008D07 Length = 156874 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 177 cggcagccgccgccgcccaccgccacca 204 |||| |||||||||||||||| |||||| Sbjct: 72397 cggccgccgccgccgcccacccccacca 72424
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 gccggcagccgccgccgcccaccg 198 |||||| ||||||||||||||||| Sbjct: 60985 gccggccgccgccgccgcccaccg 61008
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cgccgccgcccaccgccacc 203 |||||||||||||||||||| Sbjct: 68225 cgccgccgcccaccgccacc 68206
>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0669H03 Length = 167878 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 170 ccgtcgccggcagccgccgccgcccacc 197 ||||||||||| ||||||||| |||||| Sbjct: 42081 ccgtcgccggccgccgccgcctcccacc 42108
>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0104B02 Length = 169588 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 gccgccgccgcccaccgccaccat 205 ||||||||||||| |||||||||| Sbjct: 150008 gccgccgccgcccgccgccaccat 149985
>dbj|AB121445.1| Zea mays ZmHK3b mRNA for histidine kinase 3, complete cds Length = 4198 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 tcgccggcagccgccgccgc 192 |||||||||||||||||||| Sbjct: 442 tcgccggcagccgccgccgc 423
>dbj|AB102957.1| Zea mays ZmHK3a mRNA for histidine kinase 3, complete cds Length = 4598 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 tcgccggcagccgccgccgc 192 |||||||||||||||||||| Sbjct: 45 tcgccggcagccgccgccgc 26
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 gccggcagccgccgccgccc 194 |||||||||||||||||||| Sbjct: 95768 gccggcagccgccgccgccc 95787
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 gccgccgccgcccaccgccaccat 205 ||||||||||||| |||||||||| Sbjct: 35898 gccgccgccgcccgccgccaccat 35875
>dbj|AK109741.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E02, full insert sequence Length = 1536 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 170 ccgtcgccggcagccgccgccgcccacc 197 ||||||||||| ||||||||| |||||| Sbjct: 38 ccgtcgccggccgccgccgcctcccacc 65
>dbj|AK105541.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-H10, full insert sequence Length = 1567 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 gccgccgccgcccaccgccaccat 205 ||||||||||||| |||||||||| Sbjct: 183 gccgccgccgcccgccgccaccat 160
>dbj|AK103169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121F18, full insert sequence Length = 1675 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 gccggcagccgccgccgcccaccg 198 |||||| ||||||||||||||||| Sbjct: 368 gccggccgccgccgccgcccaccg 391
>ref|NM_211013.1| Eremothecium gossypii AFR112Wp (AFR112W), mRNA Length = 894 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 cgtcgccggcagccgccgccgccc 194 |||||||||| ||||||||||||| Sbjct: 331 cgtcgccggctgccgccgccgccc 308
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 ggccgccctgctgctcgtcctgca 144 |||||||||||||| ||||||||| Sbjct: 1430501 ggccgccctgctgcgcgtcctgca 1430478
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gcagccgccgccgcccaccg 198 |||||||||||||||||||| Sbjct: 1346670 gcagccgccgccgcccaccg 1346651
>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042B10, from chromosome 3, complete sequence Length = 144205 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ccgccgcccaccgccaccat 205 |||||||||||||||||||| Sbjct: 119760 ccgccgcccaccgccaccat 119779 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,171,729 Number of Sequences: 3902068 Number of extensions: 3171729 Number of successful extensions: 85708 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81761 Number of HSP's gapped (non-prelim): 3943 length of query: 421 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 399 effective length of database: 17,147,199,772 effective search space: 6841732709028 effective search space used: 6841732709028 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
