>gb|AC131112.3| Mus musculus BAC clone RP24-136L4 from chromosome 7, complete sequence
          Length = 172989

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 6      tctgttccttgcttgcttctcc 27
              ||||||||||||||||||||||
Sbjct: 136228 tctgttccttgcttgcttctcc 136249

>gb|AC131737.3| Mus musculus BAC clone RP23-106E9 from 7, complete sequence
          Length = 205306

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 6      tctgttccttgcttgcttctcc 27
              ||||||||||||||||||||||
Sbjct: 204784 tctgttccttgcttgcttctcc 204763

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 360     gccgttgccgacgacaccggc 380
               |||||||||||||||||||||
Sbjct: 1195001 gccgttgccgacgacaccggc 1194981

>gb|AE012450.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 358 of
             460 of the complete genome
          Length = 11329

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 244   cgcgcgcaccggcttcgatgg 264
             |||||||||||||||||||||
Sbjct: 10532 cgcgcgcaccggcttcgatgg 10552

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 244     cgcgcgcaccggcttcgatgg 264
               |||||||||||||||||||||
Sbjct: 1002823 cgcgcgcaccggcttcgatgg 1002803

>gb|AC035145.4|AC035145 Homo sapiens chromosome 5 clone CTD-2222L22, complete sequence
          Length = 120521

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     gttccttgcttgcttctcctt 29
             |||||||||||||||||||||
Sbjct: 77592 gttccttgcttgcttctcctt 77612

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 288      gaattggcggcgctccggccgatcc 312
                |||||||| ||||||||||||||||
Sbjct: 26779451 gaattggccgcgctccggccgatcc 26779427

>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0051O02
          Length = 169532

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 288   gaattggcggcgctccggccgatcc 312
             |||||||| ||||||||||||||||
Sbjct: 34077 gaattggccgcgctccggccgatcc 34053

>dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1047G05
          Length = 145431

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 288    gaattggcggcgctccggccgatcc 312
              |||||||| ||||||||||||||||
Sbjct: 136914 gaattggccgcgctccggccgatcc 136890

>emb|AL844200.3| Human DNA sequence from clone RP11-552P19 on chromosome 1, complete
             sequence
          Length = 175707

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     gttccttgcttgcttctcctt 29
             |||||||||||||||||||||
Sbjct: 33640 gttccttgcttgcttctcctt 33660

>ref|NM_188031.1| Oryza sativa (japonica cultivar-group), Ozsa8451 predicted mRNA
          Length = 3243

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 343 gggaggacgacggcacggcc 362
           ||||||||||||||||||||
Sbjct: 685 gggaggacgacggcacggcc 666

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 243     gcgcgcgcaccggcttcgat 262
               ||||||||||||||||||||
Sbjct: 2447759 gcgcgcgcaccggcttcgat 2447778

>gb|AC073569.26| Homo sapiens 12 BAC RP11-530C5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 177734

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   tagctactgggtggcttaga 175
             ||||||||||||||||||||
Sbjct: 93845 tagctactgggtggcttaga 93826

>gb|DP000040.1| Otolemur garnettii target 106 genomic scaffold
          Length = 277620

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    ggcttagacaattctcttgc 187
              ||||||||||||||||||||
Sbjct: 112527 ggcttagacaattctcttgc 112546

>gb|AC116574.6| Mus musculus BAC clone RP23-234F20 from chromosome 12, complete sequence
          Length = 191808

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    tggctagctactgggtggct 171
              ||||||||||||||||||||
Sbjct: 169062 tggctagctactgggtggct 169081

>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
              complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    gccgatccagacggccgtga 324
              ||||||||||||||||||||
Sbjct: 247829 gccgatccagacggccgtga 247848

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 343     gggaggacgacggcacggcc 362
               ||||||||||||||||||||
Sbjct: 9244736 gggaggacgacggcacggcc 9244717

>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0667A10
          Length = 152237

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   gggaggacgacggcacggcc 362
             ||||||||||||||||||||
Sbjct: 21330 gggaggacgacggcacggcc 21311

>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0011D01
          Length = 168655

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    gggaggacgacggcacggcc 362
              ||||||||||||||||||||
Sbjct: 145118 gggaggacgacggcacggcc 145099

>ref|NM_210802.1| Eremothecium gossypii AFL102Wp (AFL102W), mRNA
          Length = 1665

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 305 gccgatccagacggccgtga 324
           ||||||||||||||||||||
Sbjct: 411 gccgatccagacggccgtga 430


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,955,093
Number of Sequences: 3902068
Number of extensions: 1955093
Number of successful extensions: 43854
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43541
Number of HSP's gapped (non-prelim): 313
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)