ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast69e03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ROM2_YEAST (P51862) RHO1 GDP-GTP exchange protein 2 29 4.7

>ROM2_YEAST (P51862) RHO1 GDP-GTP exchange protein 2|
          Length = 1356

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -3

Query: 441 ETKPTWNSRVPSSGWATMPETETQRKS--FLAWMPERPAILPLE 316
           E KP+W S V    W  +P+ E +R+   +  ++ E+  +  LE
Sbjct: 636 EEKPSWTSSVSKEDWENLPKKEIKRQEAIYEVYITEKNFVKSLE 679


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.132    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,251,475
Number of Sequences: 219361
Number of extensions: 404825
Number of successful extensions: 923
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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