ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast69e02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 220 bits (111), Expect = 2e-54 Identities = 138/147 (93%) Strand = Plus / Minus Query: 210 cgtaccggtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgt 269 |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 6224832 cgtaccggtcgcggttcggcgacacgacgctgacgaaggtgttcgtcggcgggctggcgt 6224773 Query: 270 gggagacgccgtcggaggggctccggcagcacttcgagcagtacggcgacatcctggagg 329 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 6224772 gggagacgccgtcggagggactccggcggcacttcgagcagtacggcgagatcctggagg 6224713 Query: 330 ccgtggtcatcacggaccgcctcaccg 356 |||| |||||| | ||||||||||||| Sbjct: 6224712 ccgtcgtcatcgccgaccgcctcaccg 6224686 Score = 79.8 bits (40), Expect = 5e-12 Identities = 100/120 (83%) Strand = Plus / Minus Query: 230 gacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtcggagggg 289 ||||||||| | |||||||||||||| || ||||| ||||||||||||| | |||||| Sbjct: 24674819 gacacgacgtacaccaaggtgttcgtcggggggctcgcgtgggagacgcggagcgagggg 24674760 Query: 290 ctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccgc 349 || || |||||||||| |||||| || ||||| |||||||| |||||||| |||||| Sbjct: 24674759 ctgagggcgcacttcgaggcgtacggggagatcctcgaggccgtcgtcatcaccgaccgc 24674700 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 4412741 tggcggcggcgtcgtcgtcg 4412722
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 220 bits (111), Expect = 2e-54 Identities = 138/147 (93%) Strand = Plus / Minus Query: 210 cgtaccggtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgt 269 |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 138651 cgtaccggtcgcggttcggcgacacgacgctgacgaaggtgttcgtcggcgggctggcgt 138592 Query: 270 gggagacgccgtcggaggggctccggcagcacttcgagcagtacggcgacatcctggagg 329 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 138591 gggagacgccgtcggagggactccggcggcacttcgagcagtacggcgagatcctggagg 138532 Query: 330 ccgtggtcatcacggaccgcctcaccg 356 |||| |||||| | ||||||||||||| Sbjct: 138531 ccgtcgtcatcgccgaccgcctcaccg 138505
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 220 bits (111), Expect = 2e-54 Identities = 138/147 (93%) Strand = Plus / Minus Query: 210 cgtaccggtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgt 269 |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 18908 cgtaccggtcgcggttcggcgacacgacgctgacgaaggtgttcgtcggcgggctggcgt 18849 Query: 270 gggagacgccgtcggaggggctccggcagcacttcgagcagtacggcgacatcctggagg 329 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 18848 gggagacgccgtcggagggactccggcggcacttcgagcagtacggcgagatcctggagg 18789 Query: 330 ccgtggtcatcacggaccgcctcaccg 356 |||| |||||| | ||||||||||||| Sbjct: 18788 ccgtcgtcatcgccgaccgcctcaccg 18762
>dbj|AK058664.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-G07, full insert sequence Length = 1610 Score = 220 bits (111), Expect = 2e-54 Identities = 138/147 (93%) Strand = Plus / Plus Query: 210 cgtaccggtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgt 269 |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 420 cgtaccggtcgcggttcggcgacacgacgctgacgaaggtgttcgtcggcgggctggcgt 479 Query: 270 gggagacgccgtcggaggggctccggcagcacttcgagcagtacggcgacatcctggagg 329 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 480 gggagacgccgtcggagggactccggcggcacttcgagcagtacggcgagatcctggagg 539 Query: 330 ccgtggtcatcacggaccgcctcaccg 356 |||| |||||| | ||||||||||||| Sbjct: 540 ccgtcgtcatcgccgaccgcctcaccg 566
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 213 accggtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtggg 272 ||||| |||||||||||||||| |||| ||||||||||||||| ||||| |||||||||| Sbjct: 31800362 accggacgcggttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtggg 31800421 Query: 273 agacgccgtcggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccg 332 |||||||||| |||| || | | | ||||| |||| |||||||| ||||| ||||||| Sbjct: 31800422 agacgccgtccaagggcctgcaggaccactttcagcaatacggcgaaatcctcgaggccg 31800481 Query: 333 tggtcatcac 342 | |||||||| Sbjct: 31800482 tcgtcatcac 31800491 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 217 gtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagac 276 ||||| |||||| ||||| || | ||||||||||||||||||||||| ||||||||||| Sbjct: 29613390 gtcgccgttcggggacaccacctacaccaaggtgttcgtgggcgggctcgcgtgggagac 29613449 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 178 gatggcggcggcgtcgtcgtcgacggcgtc 207 |||||||||||||||||||||| ||||||| Sbjct: 34999630 gatggcggcggcgtcgtcgtcgtcggcgtc 34999659 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Minus Query: 178 gatggcggcggcgtcgtcgtcgacggcgtctgcg 211 ||||||| ||||||||||||| ||||||||||| Sbjct: 19279383 gatggcgatggcgtcgtcgtcgtcggcgtctgcg 19279350 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||| ||||| Sbjct: 1656151 ggcggcggcgtcgtcgtcggcggcg 1656175 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gcggcgtcgtcgtcgacggc 204 |||||||||||||||||||| Sbjct: 31986427 gcggcgtcgtcgtcgacggc 31986446
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 213 accggtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtggg 272 ||||| |||||||||||||||| |||| ||||||||||||||| ||||| |||||||||| Sbjct: 96160 accggacgcggttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtggg 96219 Query: 273 agacgccgtcggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccg 332 |||||||||| |||| || | | | ||||| |||| |||||||| ||||| ||||||| Sbjct: 96220 agacgccgtccaagggcctgcaggaccactttcagcaatacggcgaaatcctcgaggccg 96279 Query: 333 tggtcatcac 342 | |||||||| Sbjct: 96280 tcgtcatcac 96289
>dbj|AK106338.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G04, full insert sequence Length = 3440 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 213 accggtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtggg 272 ||||| |||||||||||||||| |||| ||||||||||||||| ||||| |||||||||| Sbjct: 293 accggacgcggttcggcgacaccacgctgaccaaggtgttcgtcggcggcctggcgtggg 352 Query: 273 agacgccgtcggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccg 332 |||||||||| |||| || | | | ||||| |||| |||||||| ||||| ||||||| Sbjct: 353 agacgccgtccaagggcctgcaggaccactttcagcaatacggcgaaatcctcgaggccg 412 Query: 333 tggtcatcac 342 | |||||||| Sbjct: 413 tcgtcatcac 422
>ref|NM_189337.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 95.6 bits (48), Expect = 9e-17 Identities = 102/120 (85%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 ||||||||||||||||| ||| |||||||||||||| || || ||||||||||||| | Sbjct: 42 gttcggcgacacgacgctgacgaaggtgttcgtggggggactcgcgtgggagacgcagaa 101 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||||||| | ||| |||||||||||| |||||| ||||| |||||||| |||||||| Sbjct: 102 ggaggggatgcggggatacttcgagcagttcggcgatatcctcgaggccgtcgtcatcac 161
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 95.6 bits (48), Expect = 9e-17 Identities = 102/120 (85%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 ||||||||||||||||| ||| |||||||||||||| || || ||||||||||||| | Sbjct: 42240594 gttcggcgacacgacgctgacgaaggtgttcgtggggggactcgcgtgggagacgcagaa 42240653 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||||||| | ||| |||||||||||| |||||| ||||| |||||||| |||||||| Sbjct: 42240654 ggaggggatgcggggatacttcgagcagttcggcgatatcctcgaggccgtcgtcatcac 42240713 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 5866934 tggcggcggcgtcgtcgtcg 5866953
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 95.6 bits (48), Expect = 9e-17 Identities = 102/120 (85%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 ||||||||||||||||| ||| |||||||||||||| || || ||||||||||||| | Sbjct: 12551 gttcggcgacacgacgctgacgaaggtgttcgtggggggactcgcgtgggagacgcagaa 12610 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||||||| | ||| |||||||||||| |||||| ||||| |||||||| |||||||| Sbjct: 12611 ggaggggatgcggggatacttcgagcagttcggcgatatcctcgaggccgtcgtcatcac 12670
>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1294_F06 Length = 121088 Score = 95.6 bits (48), Expect = 9e-17 Identities = 102/120 (85%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 ||||||||||||||||| ||| |||||||||||||| || || ||||||||||||| | Sbjct: 113792 gttcggcgacacgacgctgacgaaggtgttcgtggggggactcgcgtgggagacgcagaa 113851 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||||||| | ||| |||||||||||| |||||| ||||| |||||||| |||||||| Sbjct: 113852 ggaggggatgcggggatacttcgagcagttcggcgatatcctcgaggccgtcgtcatcac 113911
>dbj|AK072960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150K08, full insert sequence Length = 2247 Score = 95.6 bits (48), Expect = 9e-17 Identities = 102/120 (85%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 ||||||||||||||||| ||| |||||||||||||| || || ||||||||||||| | Sbjct: 353 gttcggcgacacgacgctgacgaaggtgttcgtggggggactcgcgtgggagacgcagaa 412 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcac 342 ||||||| | ||| |||||||||||| |||||| ||||| |||||||| |||||||| Sbjct: 413 ggaggggatgcggggatacttcgagcagttcggcgatatcctcgaggccgtcgtcatcac 472
>gb|BT016733.1| Zea mays clone Contig566 mRNA sequence Length = 1342 Score = 85.7 bits (43), Expect = 9e-14 Identities = 94/111 (84%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 |||||| ||||| |||| ||||||||||||||||||||||||||||||||||| | Sbjct: 126 gttcggggacaccacgctcaccaaggtgttcgtgggcgggctggcgtgggagacccacaa 185 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgt 333 ||| | ||||| |||||||||||| |||||||||||||| |||||||| Sbjct: 186 ggacgccctccgcgagcacttcgagcgctacggcgacatcctcgaggccgt 236
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 79.8 bits (40), Expect = 5e-12 Identities = 100/120 (83%) Strand = Plus / Minus Query: 230 gacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtcggagggg 289 ||||||||| | |||||||||||||| || ||||| ||||||||||||| | |||||| Sbjct: 8500 gacacgacgtacaccaaggtgttcgtcggggggctcgcgtgggagacgcggagcgagggg 8441 Query: 290 ctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccgc 349 || || |||||||||| |||||| || ||||| |||||||| |||||||| |||||| Sbjct: 8440 ctgagggcgcacttcgaggcgtacggggagatcctcgaggccgtcgtcatcaccgaccgc 8381
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 79.8 bits (40), Expect = 5e-12 Identities = 100/120 (83%) Strand = Plus / Minus Query: 230 gacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtcggagggg 289 ||||||||| | |||||||||||||| || ||||| ||||||||||||| | |||||| Sbjct: 158012 gacacgacgtacaccaaggtgttcgtcggggggctcgcgtgggagacgcggagcgagggg 157953 Query: 290 ctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccgc 349 || || |||||||||| |||||| || ||||| |||||||| |||||||| |||||| Sbjct: 157952 ctgagggcgcacttcgaggcgtacggggagatcctcgaggccgtcgtcatcaccgaccgc 157893
>dbj|AK065654.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035J16, full insert sequence Length = 1743 Score = 79.8 bits (40), Expect = 5e-12 Identities = 100/120 (83%) Strand = Plus / Plus Query: 230 gacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtcggagggg 289 ||||||||| | |||||||||||||| || ||||| ||||||||||||| | |||||| Sbjct: 348 gacacgacgtacaccaaggtgttcgtcggggggctcgcgtgggagacgcggagcgagggg 407 Query: 290 ctccggcagcacttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccgc 349 || || |||||||||| |||||| || ||||| |||||||| |||||||| |||||| Sbjct: 408 ctgagggcgcacttcgaggcgtacggggagatcctcgaggccgtcgtcatcaccgaccgc 467
>ref|XM_470664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1020 Score = 77.8 bits (39), Expect = 2e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 |||||| |||||||| | |||||||||||||||||| || |||||||||||||||| Sbjct: 78 gttcggtgacacgacactgaccaaggtgttcgtgggaggactggcgtgggagacgcacaa 137 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgt 333 ||| |||||| |||||||||||| | |||||||||||| |||||||| Sbjct: 138 ggacacgctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgt 188
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 77.8 bits (39), Expect = 2e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 |||||| |||||||| | |||||||||||||||||| || |||||||||||||||| Sbjct: 9852558 gttcggtgacacgacactgaccaaggtgttcgtgggaggactggcgtgggagacgcacaa 9852499 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgt 333 ||| |||||| |||||||||||| | |||||||||||| |||||||| Sbjct: 9852498 ggacacgctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgt 9852448 Score = 44.1 bits (22), Expect = 0.30 Identities = 37/42 (88%) Strand = Plus / Minus Query: 299 cacttcgagcagtacggcgacatcctggaggccgtggtcatc 340 ||||||||||||| |||||| ||| | |||||||| |||||| Sbjct: 7668989 cacttcgagcagttcggcgagatcgtcgaggccgttgtcatc 7668948 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||| |||||||| Sbjct: 34960565 ggcggcggcgtcgtcggcgacggcg 34960589 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcgtct 208 ||||||||||||||||||| || ||||| Sbjct: 26526847 ggcggcggcgtcgtcgtcgtcgtcgtct 26526874
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 77.8 bits (39), Expect = 2e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 |||||| |||||||| | |||||||||||||||||| || |||||||||||||||| Sbjct: 9850679 gttcggtgacacgacactgaccaaggtgttcgtgggaggactggcgtgggagacgcacaa 9850620 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgt 333 ||| |||||| |||||||||||| | |||||||||||| |||||||| Sbjct: 9850619 ggacacgctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgt 9850569 Score = 44.1 bits (22), Expect = 0.30 Identities = 37/42 (88%) Strand = Plus / Minus Query: 299 cacttcgagcagtacggcgacatcctggaggccgtggtcatc 340 ||||||||||||| |||||| ||| | |||||||| |||||| Sbjct: 7666824 cacttcgagcagttcggcgagatcgtcgaggccgttgtcatc 7666783 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||| |||||||| Sbjct: 35050637 ggcggcggcgtcgtcggcgacggcg 35050661 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcgtct 208 ||||||||||||||||||| || ||||| Sbjct: 26618170 ggcggcggcgtcgtcgtcgtcgtcgtct 26618197
>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0022M22, from chromosome 3, complete sequence Length = 124166 Score = 77.8 bits (39), Expect = 2e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 |||||| |||||||| | |||||||||||||||||| || |||||||||||||||| Sbjct: 14947 gttcggtgacacgacactgaccaaggtgttcgtgggaggactggcgtgggagacgcacaa 14888 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgt 333 ||| |||||| |||||||||||| | |||||||||||| |||||||| Sbjct: 14887 ggacacgctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgt 14837
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0013D02, complete sequence Length = 131883 Score = 77.8 bits (39), Expect = 2e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 |||||| |||||||| | |||||||||||||||||| || |||||||||||||||| Sbjct: 21939 gttcggtgacacgacactgaccaaggtgttcgtgggaggactggcgtgggagacgcacaa 21998 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgt 333 ||| |||||| |||||||||||| | |||||||||||| |||||||| Sbjct: 21999 ggacacgctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgt 22049
>dbj|AK060649.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H01, full insert sequence Length = 1377 Score = 77.8 bits (39), Expect = 2e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 223 gttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagacgccgtc 282 |||||| |||||||| | |||||||||||||||||| || |||||||||||||||| Sbjct: 221 gttcggtgacacgacactgaccaaggtgttcgtgggaggactggcgtgggagacgcacaa 280 Query: 283 ggaggggctccggcagcacttcgagcagtacggcgacatcctggaggccgt 333 ||| |||||| |||||||||||| | |||||||||||| |||||||| Sbjct: 281 ggacacgctccgcgagcacttcgagcgcttcggcgacatcctcgaggccgt 331
>dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1479_B12 Length = 127089 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 217 gtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagac 276 ||||| |||||| ||||| || | ||||||||||||||||||||||| ||||||||||| Sbjct: 71111 gtcgccgttcggggacaccacctacaccaaggtgttcgtgggcgggctcgcgtgggagac 71170
>dbj|AK073538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041C14, full insert sequence Length = 1900 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 217 gtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagac 276 ||||| |||||| ||||| || | ||||||||||||||||||||||| ||||||||||| Sbjct: 118 gtcgccgttcggggacaccacctacaccaaggtgttcgtgggcgggctcgcgtgggagac 177
>dbj|AK067428.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107D05, full insert sequence Length = 2190 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 217 gtcgcggttcggcgacacgacgcagaccaaggtgttcgtgggcgggctggcgtgggagac 276 ||||| |||||| ||||| || | ||||||||||||||||||||||| ||||||||||| Sbjct: 276 gtcgccgttcggggacaccacctacaccaaggtgttcgtgggcgggctcgcgtgggagac 335
>ref|XM_520667.1| PREDICTED: Pan troglodytes similar to hypothetical gene supported by AK044523 (LOC465199), mRNA Length = 4032 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 313 cggcgacatcctggaggccgtggtcatcacggaccgcc 350 |||||||||| |||||||||||||||||| ||||||| Sbjct: 3463 cggcgacatcgaggaggccgtggtcatcaccgaccgcc 3426
>gb|BC018711.1| Homo sapiens RNA-binding region (RNP1, RRM) containing 1, mRNA (cDNA clone MGC:31775 IMAGE:4852523), complete cds Length = 2162 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 313 cggcgacatcctggaggccgtggtcatcacggaccgcc 350 |||||||||| |||||||||||||||||| ||||||| Sbjct: 107 cggcgacatcgaggaggccgtggtcatcaccgaccgcc 144
>emb|X75315.1|HSRNASEB4 H.sapiens seb4B mRNA Length = 1438 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 313 cggcgacatcctggaggccgtggtcatcacggaccgcc 350 |||||||||| |||||||||||||||||| ||||||| Sbjct: 145 cggcgacatcgaggaggccgtggtcatcaccgaccgcc 182
>emb|X75314.1|HSRNASEB H.sapiens seb4D mRNA Length = 1435 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 313 cggcgacatcctggaggccgtggtcatcacggaccgcc 350 |||||||||| |||||||||||||||||| ||||||| Sbjct: 142 cggcgacatcgaggaggccgtggtcatcaccgaccgcc 179
>gb|AF432218.1| Homo sapiens CLL-associated antigen KW-5 mRNA, complete cds Length = 2376 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 313 cggcgacatcctggaggccgtggtcatcacggaccgcc 350 |||||||||| |||||||||||||||||| ||||||| Sbjct: 351 cggcgacatcgaggaggccgtggtcatcaccgaccgcc 388
>ref|NM_017495.4| Homo sapiens RNA-binding region (RNP1, RRM) containing 1 (RNPC1), transcript variant 1, mRNA Length = 2401 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 313 cggcgacatcctggaggccgtggtcatcacggaccgcc 350 |||||||||| |||||||||||||||||| ||||||| Sbjct: 346 cggcgacatcgaggaggccgtggtcatcaccgaccgcc 383
>ref|NM_183425.1| Homo sapiens RNA-binding region (RNP1, RRM) containing 1 (RNPC1), transcript variant 2, mRNA Length = 2346 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 313 cggcgacatcctggaggccgtggtcatcacggaccgcc 350 |||||||||| |||||||||||||||||| ||||||| Sbjct: 346 cggcgacatcgaggaggccgtggtcatcaccgaccgcc 383
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 178 gatggcggcggcgtcgtcgtcgacggcgtc 207 |||||||||||||||||||||| ||||||| Sbjct: 59971 gatggcggcggcgtcgtcgtcgtcggcgtc 60000
>emb|AL109955.38|HSJ800J21 Human DNA sequence from clone RP4-800J21 on chromosome 20, complete sequence Length = 108458 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 313 cggcgacatcctggaggccgtggtcatcacggaccgcc 350 |||||||||| |||||||||||||||||| ||||||| Sbjct: 32765 cggcgacatcgaggaggccgtggtcatcaccgaccgcc 32802
>gb|BT016236.1| Zea mays clone Contig69 mRNA sequence Length = 1357 Score = 48.1 bits (24), Expect = 0.019 Identities = 87/108 (80%) Strand = Plus / Minus Query: 242 accaaggtgttcgtgggcgggctggcgtgggagacgccgtcggaggggctccggcagcac 301 |||||||| ||||||||||| || || |||||||||| | |||||||| || ||| Sbjct: 1161 accaaggttttcgtgggcggcctcgcctgggagacgcggagtgaggggcttcgcgcccac 1102 Query: 302 ttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccgc 349 || ||| ||||| |||||||| |||||||| |||||||| |||||| Sbjct: 1101 tttgaggtctacggggacatcctcgaggccgttgtcatcaccgaccgc 1054
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||||||||||| Sbjct: 75846 gcggcggcgtcgtcgtcgacggcg 75823
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 48.1 bits (24), Expect = 0.019 Identities = 27/28 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcgtct 208 ||||||||||||||||||| |||||||| Sbjct: 148444 ggcggcggcgtcgtcgtcgtcggcgtct 148471
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||||||||||| Sbjct: 19592771 gcggcggcgtcgtcgtcgacggcg 19592748 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||| ||||| Sbjct: 11904785 ggcggcggcgtcgtcgtcgtcggcg 11904809 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gcgtcgtcgtcgacggcgtc 207 |||||||||||||||||||| Sbjct: 1451682 gcgtcgtcgtcgacggcgtc 1451663
>dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1399_D07, complete sequence Length = 65000 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||||||||||| Sbjct: 2253 gcggcggcgtcgtcgtcgacggcg 2230
>dbj|AK121935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107A08, full insert sequence Length = 2096 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||||||||||| Sbjct: 289 gcggcggcgtcgtcgtcgacggcg 312
>dbj|AK121679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069H08, full insert sequence Length = 2059 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||||||||||| Sbjct: 246 gcggcggcgtcgtcgtcgacggcg 269
>dbj|AK102869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111O12, full insert sequence Length = 1993 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Plus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||||||||||| Sbjct: 180 gcggcggcgtcgtcgtcgacggcg 203
>ref|NM_208645.1| Eremothecium gossypii ACL112Cp (ACL112C), mRNA Length = 600 Score = 48.1 bits (24), Expect = 0.019 Identities = 27/28 (96%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggcgtct 208 ||||||||||||||||||| |||||||| Sbjct: 593 ggcggcggcgtcgtcgtcgtcggcgtct 566
>dbj|AP006733.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02K14, TM0918b, complete sequence Length = 41851 Score = 48.1 bits (24), Expect = 0.019 Identities = 33/36 (91%) Strand = Plus / Plus Query: 241 gaccaaggtgttcgtgggcgggctggcgtgggagac 276 |||||| ||||||||||| |||||||| |||||||| Sbjct: 12003 gaccaaagtgttcgtgggagggctggcctgggagac 12038
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 183 cggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||||||| Sbjct: 1897536 cggcggcgtcgtcgtcgacggcg 1897514
>gb|BC085307.1| Mus musculus RNA-binding region (RNP1, RRM) containing 1, mRNA (cDNA clone MGC:102453 IMAGE:6396103), complete cds Length = 1772 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 259 ggaggccgtggtcatcaccgaccgcc 284
>ref|XM_612948.2| PREDICTED: Bos taurus similar to RNA-binding region containing protein 1 isoform a (LOC533516), mRNA Length = 2454 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 654 ggaggccgtggtcatcaccgaccgcc 679
>gb|BC006687.1| Mus musculus RNA-binding region (RNP1, RRM) containing 1, mRNA (cDNA clone MGC:6122 IMAGE:3582604), complete cds Length = 2308 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 304 ggaggccgtggtcatcaccgaccgcc 329
>emb|X75316.1|MMRNASEB4 M.musculus seb4 mRNA Length = 1908 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 412 ggaggccgtggtcatcaccgaccgcc 437
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 44.1 bits (22), Expect = 0.30 Identities = 37/42 (88%) Strand = Plus / Plus Query: 299 cacttcgagcagtacggcgacatcctggaggccgtggtcatc 340 ||||||||||||| |||||| ||| | |||||||| |||||| Sbjct: 46301 cacttcgagcagttcggcgagatcgtcgaggccgttgtcatc 46342
>ref|NM_019547.1| Mus musculus RNA-binding region (RNP1, RRM) containing 1 (Rnpc1), mRNA Length = 1908 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 412 ggaggccgtggtcatcaccgaccgcc 437
>dbj|AK146026.1| Mus musculus 11 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530025A03 product:RNA-binding region (RNP1, RRM) containing 1, full insert sequence Length = 1742 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 289 ggaggccgtggtcatcaccgaccgcc 314
>dbj|AK162141.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420435H15 product:RNA-binding region (RNP1, RRM) containing 1, full insert sequence Length = 1101 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 288 ggaggccgtggtcatcaccgaccgcc 313
>dbj|AK166609.1| Mus musculus 1 cell embryo 1 cell cDNA, RIKEN full-length enriched library, clone:I0C0037B01 product:RNA-binding region (RNP1, RRM) containing 1, full insert sequence Length = 889 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 316 ggaggccgtggtcatcaccgaccgcc 341
>ref|XM_345477.2| PREDICTED: Rattus norvegicus RNA-binding region (RNP1, RRM) containing 1 (predicted) (Rnpc1_predicted), mRNA Length = 1982 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 522 ggaggccgtggtcatcaccgaccgcc 547
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05 Length = 144917 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Minus Query: 178 gatggcggcggcgtcgtcgtcgacggcgtctgcg 211 ||||||| ||||||||||||| ||||||||||| Sbjct: 47181 gatggcgatggcgtcgtcgtcgtcggcgtctgcg 47148
>dbj|AK067722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120F02, full insert sequence Length = 2216 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Plus Query: 178 gatggcggcggcgtcgtcgtcgacggcgtctgcg 211 ||||||| ||||||||||||| ||||||||||| Sbjct: 52 gatggcgatggcgtcgtcgtcgtcggcgtctgcg 85
>emb|BX470106.8| Zebrafish DNA sequence from clone DKEY-11P6 in linkage group 4, complete sequence Length = 41017 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 gatggcggcggcgtcgtcgtcg 199 |||||||||||||||||||||| Sbjct: 31870 gatggcggcggcgtcgtcgtcg 31891
>emb|AL928599.5| Mouse DNA sequence from clone RP23-368M21 on chromosome 2, complete sequence Length = 113764 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccgcc 350 |||||||||||||||||| ||||||| Sbjct: 40963 ggaggccgtggtcatcaccgaccgcc 40988
>gb|AC107050.3| Homo sapiens BAC clone RP11-182A9 from 4, complete sequence Length = 167699 Score = 44.1 bits (22), Expect = 0.30 Identities = 28/30 (93%) Strand = Plus / Minus Query: 265 ggcgtgggagacgccgtcggaggggctccg 294 ||||||||| |||||| ||||||||||||| Sbjct: 75083 ggcgtgggaaacgccgccggaggggctccg 75054
>ref|XM_450634.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1815 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||| ||||| Sbjct: 426 ggcggcggcgtcgtcgtcgtcggcg 450
>ref|XM_476607.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1456 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 177 tgatggcggcggcgtcgtcgtcgac 201 |||||||||||||| |||||||||| Sbjct: 1026 tgatggcggcggcggcgtcgtcgac 1002
>gb|AY022810.1| Oryza sativa microsatellite MRG5135 containing (CGC)X8, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||| |||||||| Sbjct: 110 ggcggcggcgtcgtcggcgacggcg 86
>gb|DQ356948.1| Crocodilepox virus, complete genome Length = 190054 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||| ||||||||||| Sbjct: 188758 ggcggcggcgtcggcgtcgacggcg 188734 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||| ||||||||||| Sbjct: 1297 ggcggcggcgtcggcgtcgacggcg 1321
>emb|CR956362.5| Pig DNA sequence from clone CH242-98D1 on chromosome 17, complete sequence Length = 212503 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 326 gaggccgtggtcatcacggaccgcc 350 ||||||||||||||||| ||||||| Sbjct: 114670 gaggccgtggtcatcaccgaccgcc 114694
>emb|AJ719481.1| Gallus gallus mRNA for hypothetical protein, clone 2l21 Length = 2839 Score = 42.1 bits (21), Expect = 1.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 300 acttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccg 348 |||||||| || |||||||||| |||||| ||||||||||| ||||| Sbjct: 440 acttcgaggtgttcggcgacatcgaggaggcggtggtcatcaccgaccg 488
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||| ||||| Sbjct: 154604 ggcggcggcgtcgtcgtcgtcggcg 154580 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||| ||||| Sbjct: 127820 ggcggcggcgtcgtcgtcgtcggcg 127844
>emb|CR385490.1| Gallus gallus finished cDNA, clone ChEST962o16 Length = 1116 Score = 42.1 bits (21), Expect = 1.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 300 acttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccg 348 |||||||| || |||||||||| |||||| ||||||||||| ||||| Sbjct: 213 acttcgaggtgttcggcgacatcgaggaggcggtggtcatcaccgaccg 261
>emb|BX933592.2| Gallus gallus finished cDNA, clone ChEST53h23 Length = 1321 Score = 42.1 bits (21), Expect = 1.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 300 acttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccg 348 |||||||| || |||||||||| |||||| ||||||||||| ||||| Sbjct: 418 acttcgaggtgttcggcgacatcgaggaggcggtggtcatcaccgaccg 466
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 177 tgatggcggcggcgtcgtcgtcgac 201 |||||||||||||| |||||||||| Sbjct: 2161046 tgatggcggcggcggcgtcgtcgac 2161070 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcga 200 |||||||||||||||||||| Sbjct: 4276262 ggcggcggcgtcgtcgtcga 4276243
>ref|NM_001012863.1| Gallus gallus similar to Hypothetical protein MGC75808 (LOC420846), mRNA Length = 2839 Score = 42.1 bits (21), Expect = 1.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 300 acttcgagcagtacggcgacatcctggaggccgtggtcatcacggaccg 348 |||||||| || |||||||||| |||||| ||||||||||| ||||| Sbjct: 440 acttcgaggtgttcggcgacatcgaggaggcggtggtcatcaccgaccg 488
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||| |||||||| Sbjct: 54915 ggcggcggcgtcgtcggcgacggcg 54891
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||| ||||| Sbjct: 93254 ggcggcggcgtcgtcgtcggcggcg 93278
>gb|AY830102.1| Phytophthora infestans gypsy-like retrotransposon GypsyPi-1c, complete sequence Length = 8220 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggcgtctg 209 |||||||||||| | |||||||||||||| Sbjct: 2409 ggcggcggcgtctttgtcgacggcgtctg 2381
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||| ||||| Sbjct: 86275 ggcggcggcgtcgtcgtcgtcggcg 86299
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0441A12 Length = 185437 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcg 205 ||||||||||||||||||| ||||| Sbjct: 9265 ggcggcggcgtcgtcgtcgtcggcg 9289
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 177 tgatggcggcggcgtcgtcgtcgac 201 |||||||||||||| |||||||||| Sbjct: 28948 tgatggcggcggcggcgtcgtcgac 28972
>dbj|AK106343.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G11, full insert sequence Length = 1456 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 177 tgatggcggcggcgtcgtcgtcgac 201 |||||||||||||| |||||||||| Sbjct: 1026 tgatggcggcggcggcgtcgtcgac 1002
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 177 tgatggcggcggcgtcgtcgtcgac 201 |||||||||||||| |||||||||| Sbjct: 116839 tgatggcggcggcggcgtcgtcgac 116863
>ref|NM_188362.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 612 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 602 tggcggcggcgtcgtcgtcg 583
>ref|XM_483799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1710 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 gtgatggcggcggcgtcgtcgtcg 199 ||||||||||||||||||| |||| Sbjct: 1135 gtgatggcggcggcgtcgtggtcg 1112
>ref|XM_480184.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1223 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 gatggcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||| ||||| ||||| Sbjct: 581 gatggcggcggcgtcggcgtcgtcggcg 554
>ref|XM_474133.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1407 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcgacggcgtc 207 ||||||||||| ||||||||| |||||| Sbjct: 1114 tggcggcggcgccgtcgtcgatggcgtc 1087
>ref|XM_467899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1735 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gcggcgtcgtcgtcgacggc 204 |||||||||||||||||||| Sbjct: 130 gcggcgtcgtcgtcgacggc 149
>ref|XM_450076.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1579 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gcgtcgtcgtcgacggcgtc 207 |||||||||||||||||||| Sbjct: 387 gcgtcgtcgtcgacggcgtc 406
>ref|NM_196041.1| Oryza sativa (japonica cultivar-group) putative receptor kinase-like protein (OSJNBa0073L01.5), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 136 ggcggcggcgtcgtcgtcgccggc 159
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ggtcgcggttcggcgacacg 235 |||||||||||||||||||| Sbjct: 1671653 ggtcgcggttcggcgacacg 1671634
>ref|XM_469284.1| Oryza sativa (japonica cultivar-group), mRNA Length = 921 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggcgtct 208 ||||||||||||||||||| || ||||| Sbjct: 243 ggcggcggcgtcgtcgtcgtcgtcgtct 216
>ref|XM_472973.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2322 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 38 tggcggcggcgtcgtcgtcg 57
>gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0058E19, complete sequence Length = 147706 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 9033 ggcggcggcgtcgtcgtcgccggc 9010 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 7388 ggcggcggcgtcgtcgtcgccggc 7411
>gb|AC114613.12| Mus musculus chromosome 5, clone RP24-80F7, complete sequence Length = 190200 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 attaaccagccagttcaacc 74 |||||||||||||||||||| Sbjct: 154785 attaaccagccagttcaacc 154766
>ref|XM_323942.1| Neurospora crassa OR74A hypothetical protein (NCU04587.1) partial mRNA Length = 4749 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 gcggcggcgtcgtcgtcgac 201 |||||||||||||||||||| Sbjct: 4049 gcggcggcgtcgtcgtcgac 4030
>ref|XM_422088.1| PREDICTED: Gallus gallus similar to LOC398645 protein (LOC424239), mRNA Length = 1346 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 gctccggcagcacttcgagcagtacggc 316 |||||||||| |||||||||||| |||| Sbjct: 222 gctccggcagtacttcgagcagttcggc 249
>ref|XM_953195.1| Neurospora crassa OR74A hypothetical protein (NCU04587.1) partial mRNA Length = 4749 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 gcggcggcgtcgtcgtcgac 201 |||||||||||||||||||| Sbjct: 4049 gcggcggcgtcgtcgtcgac 4030
>gb|AY579411.1| Oryza sativa (japonica cultivar-group) RING/C3HC4/PHD zinc finger-like protein mRNA, complete cds Length = 1670 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gcggcgtcgtcgtcgacggc 204 |||||||||||||||||||| Sbjct: 117 gcggcgtcgtcgtcgacggc 136
>emb|BX294012.1|NC80A10 Neurospora crassa DNA linkage group V Cosmid contig 80A10 Length = 161126 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gcggcggcgtcgtcgtcgac 201 |||||||||||||||||||| Sbjct: 83491 gcggcggcgtcgtcgtcgac 83510
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cggcgtcgtcgtcgacggcg 205 |||||||||||||||||||| Sbjct: 77965 cggcgtcgtcgtcgacggcg 77946
>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence Length = 176615 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 171199 tggcggcggcgtcgtcgtcg 171180
>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17, complete sequence Length = 129498 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 3205 tggcggcggcgtcgtcgtcg 3186
>emb|AL662946.2|OSJN00139 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991113_30, complete sequence Length = 141128 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 131958 tggcggcggcgtcgtcgtcg 131939
>gb|AC092548.10| Oryza sativa chromosome 10 BAC OSJNBa0073L01 genomic sequence, complete sequence Length = 179199 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 4231 ggcggcggcgtcgtcgtcgccggc 4208 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 2586 ggcggcggcgtcgtcgtcgccggc 2609
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 Length = 2039961 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ctgagggcggcgcgccggaa 55 |||||||||||||||||||| Sbjct: 1831162 ctgagggcggcgcgccggaa 1831143
>gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete genome Length = 135611 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 gatggcggcggcgtcgtcgtcgac 201 ||||||| |||||||||||||||| Sbjct: 91798 gatggcgacggcgtcgtcgtcgac 91821
>dbj|AK165039.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130314D17 product:unclassifiable, full insert sequence Length = 5546 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 attaaccagccagttcaacc 74 |||||||||||||||||||| Sbjct: 1064 attaaccagccagttcaacc 1083
>dbj|AK172625.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830221A19 product:RNA-binding region (RNP1, RRM) containing 1, full insert sequence Length = 1739 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 ggaggccgtggtcatcacggaccg 348 |||||||||||||||||| ||||| Sbjct: 286 ggaggccgtggtcatcaccgaccg 309
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 180 tggcggcggcgtcgtcgtcgacggcgtc 207 ||||||||||| ||||||||| |||||| Sbjct: 33172677 tggcggcggcgccgtcgtcgatggcgtc 33172704 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 24415547 tggcggcggcgtcgtcgtcg 24415528 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 24006226 tggcggcggcgtcgtcgtcg 24006207
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 ||||||||| |||||||||||||| Sbjct: 25664713 gcggcggcggcgtcgtcgacggcg 25664690
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 10673463 ggcggcggcgtcgtcgtcgccggc 10673440 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 10671818 ggcggcggcgtcgtcgtcgccggc 10671841
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 gtgatggcggcggcgtcgtcgtcg 199 ||||||||||||||||||| |||| Sbjct: 28156433 gtgatggcggcggcgtcgtggtcg 28156456 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 gatggcggcggcgtcgtcgtcgacggcg 205 |||||||||| || |||||||||||||| Sbjct: 8612692 gatggcggcgacggcgtcgtcgacggcg 8612665 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 gatggcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||| ||||| ||||| Sbjct: 3320657 gatggcggcggcgtcggcgtcgtcggcg 3320684
>gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 genomic sequence, complete sequence Length = 136712 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggcgtct 208 ||||||||||||||||||| || ||||| Sbjct: 49661 ggcggcggcgtcgtcgtcgtcgtcgtct 49688
>gb|AY826937.1| Heterocapsa triquetra clone HTU14 unknown protein mRNA, partial cds Length = 461 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 191 ggcggcggcgtcgtcgtcgccggc 168
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 tcgagcagtacggcgacatc 322 |||||||||||||||||||| Sbjct: 3158578 tcgagcagtacggcgacatc 3158597
>emb|BX930757.1| Gallus gallus finished cDNA, clone ChEST967p13 Length = 1203 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 gctccggcagcacttcgagcagtacggc 316 |||||||||| |||||||||||| |||| Sbjct: 196 gctccggcagtacttcgagcagttcggc 223
>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0016I09 Length = 148517 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 70675 tggcggcggcgtcgtcgtcg 70694
>dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0005A05 Length = 162520 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 7471 tggcggcggcgtcgtcgtcg 7452
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 60422 tggcggcggcgtcgtcgtcg 60403
>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0087F21 Length = 187401 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 gatggcggcggcgtcgtcgtcgacggcg 205 |||||||||| || |||||||||||||| Sbjct: 124603 gatggcggcgacggcgtcgtcgacggcg 124576
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gcggcgtcgtcgtcgacggc 204 |||||||||||||||||||| Sbjct: 147428 gcggcgtcgtcgtcgacggc 147447
>dbj|AP005744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1512_E04 Length = 157848 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gcgtcgtcgtcgacggcgtc 207 |||||||||||||||||||| Sbjct: 69795 gcgtcgtcgtcgacggcgtc 69776
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcga 200 |||||||||||||||||||| Sbjct: 97316 ggcggcggcgtcgtcgtcga 97297
>gb|AE005020.1| Halobacterium sp. NRC-1 section 51 of 170 of the complete genome Length = 9823 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 ggcggcgtcgtcgtcgacggcgtc 207 ||||||| |||||||||||||||| Sbjct: 861 ggcggcgacgtcgtcgacggcgtc 838
>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1175_B01 Length = 96191 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gcggcgtcgtcgtcgacggc 204 |||||||||||||||||||| Sbjct: 6802 gcggcgtcgtcgtcgacggc 6821
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 gtgatggcggcggcgtcgtcgtcg 199 ||||||||||||||||||| |||| Sbjct: 153928 gtgatggcggcggcgtcgtggtcg 153951
>dbj|AK109443.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-A03, full insert sequence Length = 1649 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 gtgatggcggcggcgtcgtcgtcg 199 ||||||||||||||||||| |||| Sbjct: 1110 gtgatggcggcggcgtcgtggtcg 1087
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 gtgatggcggcggcgtcgtcgtcg 199 ||||||||||||||||||| |||| Sbjct: 39906 gtgatggcggcggcgtcgtggtcg 39929
>dbj|AK120849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023F02, full insert sequence Length = 3155 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 173 tggcggcggcgtcgtcgtcg 192
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 gatggcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||| ||||| ||||| Sbjct: 98224 gatggcggcggcgtcggcgtcgtcggcg 98251
>dbj|AK108144.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-E12, full insert sequence Length = 1223 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 178 gatggcggcggcgtcgtcgtcgacggcg 205 |||||||||||||||| ||||| ||||| Sbjct: 581 gatggcggcggcgtcggcgtcgtcggcg 554
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 agcagtacggcgacatcctg 325 |||||||||||||||||||| Sbjct: 2847821 agcagtacggcgacatcctg 2847802
>dbj|AK067456.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107I10, full insert sequence Length = 1735 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gcggcgtcgtcgtcgacggc 204 |||||||||||||||||||| Sbjct: 130 gcggcgtcgtcgtcgacggc 149
>dbj|AK063515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-G07, full insert sequence Length = 2418 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 gtgatggcggcggcgtcgtcgtcg 199 ||||||||||||||||||| |||| Sbjct: 1713 gtgatggcggcggcgtcgtggtcg 1690
>dbj|AK059022.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B05, full insert sequence Length = 1579 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gcgtcgtcgtcgacggcgtc 207 |||||||||||||||||||| Sbjct: 387 gcgtcgtcgtcgacggcgtc 406
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 180 tggcggcggcgtcgtcgtcgacggcgtc 207 ||||||||||| ||||||||| |||||| Sbjct: 63156 tggcggcggcgccgtcgtcgatggcgtc 63183
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 cggcgacatcctggaggccg 332 |||||||||||||||||||| Sbjct: 1342233 cggcgacatcctggaggccg 1342252
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cggcgtcgtcgtcgacggcg 205 |||||||||||||||||||| Sbjct: 1291107 cggcgtcgtcgtcgacggcg 1291126
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 10679502 ggcggcggcgtcgtcgtcgccggc 10679479 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 ggcggcggcgtcgtcgtcgacggc 204 ||||||||||||||||||| |||| Sbjct: 10677857 ggcggcggcgtcgtcgtcgccggc 10677880
>gb|AF068186.1|AF068186 Spodoptera exigua nucleopolyhedrovirus DNA polymerase (dpol) gene, partial cds Length = 1910 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 gatggcggcggcgtcgtcgtcgac 201 ||||||| |||||||||||||||| Sbjct: 1078 gatggcgacggcgtcgtcgtcgac 1101
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 ||||||||| |||||||||||||| Sbjct: 25592889 gcggcggcggcgtcgtcgacggcg 25592866
>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167131 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 ||||||||| |||||||||||||| Sbjct: 31951 gcggcggcggcgtcgtcgacggcg 31928
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 gcggcggcgtcgtcgtcgacggcg 205 ||||||||| |||||||||||||| Sbjct: 8961 gcggcggcggcgtcgtcgacggcg 8984
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 180 tggcggcggcgtcgtcgtcgacggcgtc 207 ||||||||||| ||||||||| |||||| Sbjct: 55326 tggcggcggcgccgtcgtcgatggcgtc 55353
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tggcggcggcgtcgtcgtcg 199 |||||||||||||||||||| Sbjct: 8869 tggcggcggcgtcgtcgtcg 8850 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,840,107 Number of Sequences: 3902068 Number of extensions: 1840107 Number of successful extensions: 46871 Number of sequences better than 10.0: 142 Number of HSP's better than 10.0 without gapping: 158 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44533 Number of HSP's gapped (non-prelim): 2298 length of query: 356 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 334 effective length of database: 17,147,199,772 effective search space: 5727164723848 effective search space used: 5727164723848 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
