>ref|XM_475665.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1815

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                       
Query: 59  ggtccgtggggcggcagcggcggcaccatcttcgacgacggcgtgtacaccggcgtgtgg 118
           ||||| ||||| || || || |||||||| || || || ||| |||||||||| ||||||
Sbjct: 781 ggtccttggggtggaagtggtggcaccatgtttgatgatggcatgtacaccggtgtgtgg 840

                   
Query: 119 cagatcaa 126
           ||||||||
Sbjct: 841 cagatcaa 848

>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0108E17, complete sequence
          Length = 139829

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                         
Query: 59    ggtccgtggggcggcagcggcggcaccatcttcgacgacggcgtgtacaccggcgtgtgg 118
             ||||| ||||| || || || |||||||| || || || ||| |||||||||| ||||||
Sbjct: 30369 ggtccttggggtggaagtggtggcaccatgtttgatgatggcatgtacaccggtgtgtgg 30428

                     
Query: 119   cagatcaa 126
             ||||||||
Sbjct: 30429 cagatcaa 30436

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                            
Query: 59       ggtccgtggggcggcagcggcggcaccatcttcgacgacggcgtgtacaccggcgtgtgg 118
                ||||| ||||| || || || |||||||| || || || ||| |||||||||| ||||||
Sbjct: 24961516 ggtccttggggtggaagtggtggcaccatgtttgatgatggcatgtacaccggtgtgtgg 24961575

                        
Query: 119      cagatcaa 126
                ||||||||
Sbjct: 24961576 cagatcaa 24961583

>dbj|AK073221.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033005A04, full
           insert sequence
          Length = 2155

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                       
Query: 59  ggtccgtggggcggcagcggcggcaccatcttcgacgacggcgtgtacaccggcgtgtgg 118
           ||||| ||||| || || || |||||||| || || || ||| |||||||||| ||||||
Sbjct: 882 ggtccttggggtggaagtggtggcaccatgtttgatgatggcatgtacaccggtgtgtgg 941

                   
Query: 119 cagatcaa 126
           ||||||||
Sbjct: 942 cagatcaa 949

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 77      ggcggcaccatcttcgacgacgg 99
               |||||||||||||||||||||||
Sbjct: 2444906 ggcggcaccatcttcgacgacgg 2444884

>gb|AE008707.1| Salmonella typhimurium LT2, section 15 of 220 of the complete genome
          Length = 22026

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 67    gggcggcagcggcggcaccatc 88
             ||||||||||||||||||||||
Sbjct: 16023 gggcggcagcggcggcaccatc 16044

>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16
          Length = 346362

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 88     cttcgacgacggcgtgtacaccggcg 113
              ||||||||||||| ||||||||||||
Sbjct: 247506 cttcgacgacggcctgtacaccggcg 247481

>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 88     cttcgacgacggcgtgtacaccggcg 113
              ||||||||||||| ||||||||||||
Sbjct: 161438 cttcgacgacggcctgtacaccggcg 161413

>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12
          Length = 348134

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 88     cttcgacgacggcgtgtacaccggcg 113
              ||||||||||||| ||||||||||||
Sbjct: 218605 cttcgacgacggcctgtacaccggcg 218630

>emb|AJ320483.1|SEN320483 Salmonella enterica subsp. enterica serovar Typhimurium DNA for
             centisome 7 genomic island
          Length = 37866

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 67    gggcggcagcggcggcaccatc 88
             ||||||||||||||||||||||
Sbjct: 12962 gggcggcagcggcggcaccatc 12983

>gb|AF171632.1|AF171632 Bordetella bronchiseptica phosphoglucomutase (pgm) gene, complete cds
          Length = 3200

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 88   cttcgacgacggcgtgtacaccggcg 113
            ||||||||||||| ||||||||||||
Sbjct: 2093 cttcgacgacggcctgtacaccggcg 2118

>gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence
          Length = 338007

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 67    gggcggcagcggcggcaccat 87
             |||||||||||||||||||||
Sbjct: 17176 gggcggcagcggcggcaccat 17196

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 68       ggcggcagcggcggcaccatc 88
                |||||||||||||||||||||
Sbjct: 25564548 ggcggcagcggcggcaccatc 25564528

>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0523F01
          Length = 146419

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 68    ggcggcagcggcggcaccatc 88
             |||||||||||||||||||||
Sbjct: 82865 ggcggcagcggcggcaccatc 82845

>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 114     tgtggcagatcaacctgacccgcg 137
               ||||||||||||||| ||||||||
Sbjct: 1333552 tgtggcagatcaaccagacccgcg 1333529

>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete
             sequence
          Length = 147117

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    cgtggggcggcagcggcggc 82
             ||||||||||||||||||||
Sbjct: 72334 cgtggggcggcagcggcggc 72315

>gb|AE009850.1|AE009850 Pyrobaculum aerophilum strain IM2 section 105 of 201 of the complete
            genome
          Length = 11183

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 95   gacggcgtgtacaccggcgtgtgg 118
            |||||||||||||||| |||||||
Sbjct: 9039 gacggcgtgtacaccgacgtgtgg 9016

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 63       cgtggggcggcagcggcggc 82
                ||||||||||||||||||||
Sbjct: 21397321 cgtggggcggcagcggcggc 21397302

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 288     gcccgaccatcatcatgggc 307
               ||||||||||||||||||||
Sbjct: 3357327 gcccgaccatcatcatgggc 3357308

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 79      cggcaccatcttcgacgacggcgt 102
               ||||||| ||||||||||||||||
Sbjct: 2433958 cggcaccgtcttcgacgacggcgt 2433935

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 63       cgtggggcggcagcggcggc 82
                ||||||||||||||||||||
Sbjct: 21408584 cgtggggcggcagcggcggc 21408565


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,850,038
Number of Sequences: 3902068
Number of extensions: 1850038
Number of successful extensions: 52318
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51885
Number of HSP's gapped (non-prelim): 433
length of query: 385
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 363
effective length of database: 17,147,199,772
effective search space: 6224433517236
effective search space used: 6224433517236
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)