>CSPG2_MOUSE (Q62059) Versican core protein precursor (Large fibroblast|
            proteoglycan) (Chondroitin sulfate proteoglycan core
            protein 2) (PG-M)
          Length = 3358

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = +2

Query: 194  TEATPEMASFFGAKPE--AAVLPEALDNSKAAKPEA--ASAMPTTTNTSARQS 340
            TEATPE++S     P+  ++  P  +DN  +  PE    SA P +T TS+++S
Sbjct: 2783 TEATPEVSSLAELSPQIPSSPFPVYVDNGVSKFPEVPHTSAQPVSTVTSSQKS 2835

>FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1|
          Length = 959

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
 Frame = +2

Query: 185 EGKTEATPEMASFFGAKPEAAVLPEALDNSKA---AKPEAASAMPTTTNTSARQS 340
           E +TE TPE  +   A+PEA   PEA   ++A   A+PEA +  P +   + +++
Sbjct: 340 EAETEVTPEAEAEPEAEPEAEAEPEAEAEAEAEAEAEPEAEAPAPESVAPALQEA 394

>H1_CHITH (P21895) Histone H1|
          Length = 231

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +2

Query: 191 KTEATPEMASFFGAKPEAAVLPEALDNSKAAKPEAASAMPTTTNTSARQSP 343
           K  A  +      AKP+AA  P+A    K AKP+ A+A P     +A + P
Sbjct: 171 KKPAAAKPTKKVAAKPKAAPKPKAAPKPKVAKPKKAAA-PKAKKPAAEKKP 220

>K0690_CHICK (Q5ZKD5) Protein KIAA0690 homolog|
          Length = 1294

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = -2

Query: 184  VAEVLQPVGLRPDGQQRR--HAERHEQIPPDGRHCFGRRSSSGASRK-DRVCARDGERRS 14
            VA+VLQ VGLR    Q+R    E  +  P  G +   R   SG  R  D+  A   E RS
Sbjct: 1173 VADVLQEVGLRSKKSQKRRFREEPDDDEPETGTYSQYRAGGSGIHRPLDKKPAFGAEYRS 1232

Query: 13   K 11
            K
Sbjct: 1233 K 1233

>H12_VOLCA (Q08865) Histone H1-II|
          Length = 240

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +2

Query: 185 EGKTEATPEMASFFGAKPEAAVLPEALDNSKAAKPEAASAMPTTTNTSARQSPPRRS 355
           EG+ +A    +    AKP+    P+A    KAAK  AA   P     +A+++ P+++
Sbjct: 131 EGEKKAVKPKSEKKAAKPKTEKKPKAAKKPKAAKKPAAK-KPAAKKPAAKKATPKKA 186

>DHSL_ANASP (Q8YQL7) Deoxyhypusine synthase-like protein (EC 2.5.-.-)|
          Length = 383

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
 Frame = +2

Query: 164 GLEDFGNE---GKTEATPEMASFFGAKPEAAVL-----PEALDNSKAAKPEAASAMPTTT 319
           GLE+ G++     T+A P+     GA P  AV      P+ L ++     ++  A+P  T
Sbjct: 266 GLEERGHDFFVQFTDARPDTGGLSGATPAEAVSWGKIDPDELPSTIVCYTDSTIALPLVT 325

Query: 320 NTSARQSPPR 349
                Q PPR
Sbjct: 326 AYVLNQCPPR 335

>CACB2_BOVIN (Q9MZL5) Voltage-dependent L-type calcium channel beta-2 subunit|
           (CAB2) (Calcium channel, voltage-dependent, beta 2
           subunit)
          Length = 603

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
 Frame = -2

Query: 145 GQQRRHAERHEQIPPDGR--HCFGRRSSSGASRKDRVCARDGERRSK 11
           G+ R    RH    PD    H    +  S    KDR C +DGE  S+
Sbjct: 541 GEHRHREPRHRSRDPDREQDHNESNKQRSRHKSKDRYCDKDGEGLSR 587

>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)|
          Length = 5183

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 17/67 (25%), Positives = 26/67 (38%)
 Frame = +2

Query: 152 SESHGLEDFGNEGKTEATPEMASFFGAKPEAAVLPEALDNSKAAKPEAASAMPTTTNTSA 331
           SES G +      K E   +  +    KP+A  +P+        +P A   +PT   +  
Sbjct: 784 SESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPK 843

Query: 332 RQSPPRR 352
            Q   RR
Sbjct: 844 PQEQSRR 850


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,654,323
Number of Sequences: 219361
Number of extensions: 473694
Number of successful extensions: 2354
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2349
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)