ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast69d08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ243961.1|OSA243961 Oryza sativa chromosome 4 BAC l1332 genomic sequences Length = 74658 Score = 151 bits (76), Expect = 2e-33 Identities = 150/174 (86%), Gaps = 3/174 (1%) Strand = Plus / Minus Query: 110 ctgctcgtggcgctctgcgtggcggcgctgctggccgtcgggtcggagtcccacgggctg 169 ||||| || ||||||||||| | |||||| | |||||||| |||||||||||||| || Sbjct: 14533 ctgctggtcgcgctctgcgtcgtggcgctcttcgccgtcggatcggagtcccacggcctc 14474 Query: 170 gaggacttcggcaacgaggggaagacggaggcgacgccggagatggcctccttcttcggc 229 ||||||||| || |||||||| || ||||||||||||| ||||||||||||||||||| Sbjct: 14473 gaggacttccgc---gaggggaacaccgaggcgacgccggcgatggcctccttcttcggc 14417 Query: 230 gccaagcccgaggccgccgtgctcccggaggcgctggacaactccaaggccgcc 283 ||||||||||||||||| ||||||||||||||| ||| |||||| |||||| Sbjct: 14416 agcaagcccgaggccgccgagctcccggaggcgctcgacgcctccaatgccgcc 14363 Score = 103 bits (52), Expect = 5e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 341 ccgccgcgcagatccgtggccgtggccgccggtgtggcctgcggcgtcgcggcactggcc 400 ||||| |||||||||||| ||||||||||||| ||||| |||| ||||||||| |||| Sbjct: 14284 ccgcctcgcagatccgtgtccgtggccgccggcgtggcgtgcgccgtcgcggcggtggcg 14225 Query: 401 gtcgtcggcgtggcagtcgccgtcgccttcgtggtgcgcgccaggcgc 448 || |||||||| || |||||||| || | ||||||||||||||||||| Sbjct: 14224 gtggtcggcgtcgcggtcgccgtggcgtacgtggtgcgcgccaggcgc 14177 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 279 ccgccaagccggaggcggcctcggcgatgccca 311 |||||||||||||||| || |||||||| |||| Sbjct: 14355 ccgccaagccggaggccgcgtcggcgatcccca 14323
>ref|XM_473917.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 432 Score = 143 bits (72), Expect = 6e-31 Identities = 149/174 (85%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 110 ctgctcgtggcgctctgcgtggcggcgctgctggccgtcgggtcggagtcccacgggctg 169 ||||| || ||||||||||| | |||||| | |||||||| |||||||||||||| || Sbjct: 34 ctgctggtcgcgctctgcgtcgtggcgctcttcgccgtcggatcggagtcccacggcctc 93 Query: 170 gaggacttcggcaacgaggggaagacggaggcgacgccggagatggcctccttcttcggc 229 ||||||||| || |||||||| || ||||||||||||| |||||| |||||||||||| Sbjct: 94 gaggacttccgc---gaggggaacaccgaggcgacgccggcgatggcttccttcttcggc 150 Query: 230 gccaagcccgaggccgccgtgctcccggaggcgctggacaactccaaggccgcc 283 ||||||||||||||||| ||||||||||||||| ||| |||||| |||||| Sbjct: 151 agcaagcccgaggccgccgagctcccggaggcgctcgacgcctccaatgccgcc 204 Score = 103 bits (52), Expect = 5e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 341 ccgccgcgcagatccgtggccgtggccgccggtgtggcctgcggcgtcgcggcactggcc 400 ||||| |||||||||||| ||||||||||||| ||||| |||| ||||||||| |||| Sbjct: 283 ccgcctcgcagatccgtgtccgtggccgccggcgtggcgtgcgccgtcgcggcggtggcg 342 Query: 401 gtcgtcggcgtggcagtcgccgtcgccttcgtggtgcgcgccaggcgc 448 || |||||||| || |||||||| || | ||||||||||||||||||| Sbjct: 343 gtggtcggcgtcgcggtcgccgtggcgtacgtggtgcgcgccaggcgc 390 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 279 ccgccaagccggaggcggcctcggcgatgccca 311 |||||||||||||||| || |||||||| |||| Sbjct: 212 ccgccaagccggaggccgcgtcggcgatcccca 244
>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23, complete sequence Length = 164805 Score = 143 bits (72), Expect = 6e-31 Identities = 149/174 (85%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 110 ctgctcgtggcgctctgcgtggcggcgctgctggccgtcgggtcggagtcccacgggctg 169 ||||| || ||||||||||| | |||||| | |||||||| |||||||||||||| || Sbjct: 104388 ctgctggtcgcgctctgcgtcgtggcgctcttcgccgtcggatcggagtcccacggcctc 104447 Query: 170 gaggacttcggcaacgaggggaagacggaggcgacgccggagatggcctccttcttcggc 229 ||||||||| || |||||||| || ||||||||||||| |||||| |||||||||||| Sbjct: 104448 gaggacttccgc---gaggggaacaccgaggcgacgccggcgatggcttccttcttcggc 104504 Query: 230 gccaagcccgaggccgccgtgctcccggaggcgctggacaactccaaggccgcc 283 ||||||||||||||||| ||||||||||||||| ||| |||||| |||||| Sbjct: 104505 agcaagcccgaggccgccgagctcccggaggcgctcgacgcctccaatgccgcc 104558 Score = 103 bits (52), Expect = 5e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 341 ccgccgcgcagatccgtggccgtggccgccggtgtggcctgcggcgtcgcggcactggcc 400 ||||| |||||||||||| ||||||||||||| ||||| |||| ||||||||| |||| Sbjct: 104637 ccgcctcgcagatccgtgtccgtggccgccggcgtggcgtgcgccgtcgcggcggtggcg 104696 Query: 401 gtcgtcggcgtggcagtcgccgtcgccttcgtggtgcgcgccaggcgc 448 || |||||||| || |||||||| || | ||||||||||||||||||| Sbjct: 104697 gtggtcggcgtcgcggtcgccgtggcgtacgtggtgcgcgccaggcgc 104744 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 279 ccgccaagccggaggcggcctcggcgatgccca 311 |||||||||||||||| || |||||||| |||| Sbjct: 104566 ccgccaagccggaggccgcgtcggcgatcccca 104598
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 143 bits (72), Expect = 6e-31 Identities = 149/174 (85%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 110 ctgctcgtggcgctctgcgtggcggcgctgctggccgtcgggtcggagtcccacgggctg 169 ||||| || ||||||||||| | |||||| | |||||||| |||||||||||||| || Sbjct: 31526705 ctgctggtcgcgctctgcgtcgtggcgctcttcgccgtcggatcggagtcccacggcctc 31526764 Query: 170 gaggacttcggcaacgaggggaagacggaggcgacgccggagatggcctccttcttcggc 229 ||||||||| || |||||||| || ||||||||||||| |||||| |||||||||||| Sbjct: 31526765 gaggacttccgc---gaggggaacaccgaggcgacgccggcgatggcttccttcttcggc 31526821 Query: 230 gccaagcccgaggccgccgtgctcccggaggcgctggacaactccaaggccgcc 283 ||||||||||||||||| ||||||||||||||| ||| |||||| |||||| Sbjct: 31526822 agcaagcccgaggccgccgagctcccggaggcgctcgacgcctccaatgccgcc 31526875 Score = 103 bits (52), Expect = 5e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 341 ccgccgcgcagatccgtggccgtggccgccggtgtggcctgcggcgtcgcggcactggcc 400 ||||| |||||||||||| ||||||||||||| ||||| |||| ||||||||| |||| Sbjct: 31526954 ccgcctcgcagatccgtgtccgtggccgccggcgtggcgtgcgccgtcgcggcggtggcg 31527013 Query: 401 gtcgtcggcgtggcagtcgccgtcgccttcgtggtgcgcgccaggcgc 448 || |||||||| || |||||||| || | ||||||||||||||||||| Sbjct: 31527014 gtggtcggcgtcgcggtcgccgtggcgtacgtggtgcgcgccaggcgc 31527061 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 279 ccgccaagccggaggcggcctcggcgatgccca 311 |||||||||||||||| || |||||||| |||| Sbjct: 31526883 ccgccaagccggaggccgcgtcggcgatcccca 31526915 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gtggcggcgctgctggccgt 147 |||||||||||||||||||| Sbjct: 21755621 gtggcggcgctgctggccgt 21755640
>gb|BT018339.1| Zea mays clone EL01T0403A09.c mRNA sequence Length = 838 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 341 ccgccgcgcagatccgtggccgtggccgccggtgtggcctgcggcgtcgcggcactggcc 400 ||||||||||| |||||| ||||||||||||| |||||||||||||| || || ||||| Sbjct: 406 ccgccgcgcaggtccgtgtccgtggccgccggcgtggcctgcggcgtggctgccgtggcc 465 Query: 401 gtcgtcggcgtggcagtcgccgtcgccttcgtggtgcgcgccaggcgc 448 || |||||| | || | |||||| || | ||||||||||| ||||||| Sbjct: 466 gtggtcggcatcgcggccgccgtggcgtacgtggtgcgcggcaggcgc 513 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 130 ggcggcgctgctggccgtcgggtcggagtcccacgggctggaggacttcg 179 |||||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 153 ggcggcgctgctcgccgtgcggtcggagtcccacggcctggaggacttcg 202 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 232 caagcccgaggccgccgtgctcccggaggcgctggac 268 ||||||||||||||| | |||||||||||| |||||| Sbjct: 240 caagcccgaggccgcggcgctcccggaggccctggac 276
>gb|AY103780.1| Zea mays PCO084743 mRNA sequence Length = 1200 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 341 ccgccgcgcagatccgtggccgtggccgccggtgtggcctgcggcgtcgcggcactggcc 400 ||||||||||| |||||| ||||||||||||| |||||||||||||| || || ||||| Sbjct: 620 ccgccgcgcaggtccgtgtccgtggccgccggcgtggcctgcggcgtggctgccgtggcc 679 Query: 401 gtcgtcggcgtggcagtcgccgtcgccttcgtggtgcgcgccaggcgc 448 || |||||| | || | |||||| || | ||||||||||| ||||||| Sbjct: 680 gtggtcggcatcgcggccgccgtggcgtacgtggtgcgcggcaggcgc 727 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 130 ggcggcgctgctggccgtcgggtcggagtcccacgggctggaggacttcg 179 |||||||||||| ||||| |||||||| ||||||| ||||||||||||| Sbjct: 370 ggcggcgctgctcgccgtgcggtcggaggcccacggcctggaggacttcg 419 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 232 caagcccgaggccgccgtgctcccggaggcgctggac 268 ||||||||||||||| | |||||||||||| |||||| Sbjct: 457 caagcccgaggccgcggcgctcccggaggccctggac 493
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 300 cggcgatgcccaccaccaccaac 322 ||||||||||||||||||||||| Sbjct: 25093205 cggcgatgcccaccaccaccaac 25093227 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 agcccgaggccgccgtgctc 253 |||||||||||||||||||| Sbjct: 5847078 agcccgaggccgccgtgctc 5847059
>dbj|AP004733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0023I22 Length = 170029 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 300 cggcgatgcccaccaccaccaac 322 ||||||||||||||||||||||| Sbjct: 145538 cggcgatgcccaccaccaccaac 145560
>dbj|AP007205.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0048L03 Length = 142377 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 300 cggcgatgcccaccaccaccaac 322 ||||||||||||||||||||||| Sbjct: 39391 cggcgatgcccaccaccaccaac 39413
>gb|AC022351.3| Drosophila melanogaster clone BACR29G15, complete sequence Length = 179396 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 gctggaggacttcggcaacgag 187 |||||||||||||||||||||| Sbjct: 83364 gctggaggacttcggcaacgag 83343
>ref|NM_167524.2| Drosophila melanogaster Calcineurin A at 14F CG9819-RB, transcript variant B (CanA-14F), mRNA Length = 3041 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 gctggaggacttcggcaacgag 187 |||||||||||||||||||||| Sbjct: 1410 gctggaggacttcggcaacgag 1431
>ref|NM_167523.2| Drosophila melanogaster Calcineurin A at 14F CG9819-RA, transcript variant A (CanA-14F), mRNA Length = 3007 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 gctggaggacttcggcaacgag 187 |||||||||||||||||||||| Sbjct: 1376 gctggaggacttcggcaacgag 1397
>gb|BT004864.1| Drosophila melanogaster RE14919 full insert cDNA Length = 3028 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 gctggaggacttcggcaacgag 187 |||||||||||||||||||||| Sbjct: 1376 gctggaggacttcggcaacgag 1397
>gb|AE003502.4| Drosophila melanogaster chromosome X, section 54 of 74 of the complete sequence Length = 304712 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 gctggaggacttcggcaacgag 187 |||||||||||||||||||||| Sbjct: 234297 gctggaggacttcggcaacgag 234276
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 gtggccgtggccgccggtgtg 376 ||||||||||||||||||||| Sbjct: 1258866 gtggccgtggccgccggtgtg 1258886
>ref|NM_001009949.1| Mus musculus mitochondrial carrier triple repeat 1 (Mcart1), mRNA Length = 4211 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgtggcggcgctgctggccg 146 ||||||||||||||||||||| Sbjct: 486 gcgtggcggcgctgctggccg 506
>ref|XM_951134.1| Neurospora crassa OR74A hypothetical protein (NCU08784.1) partial mRNA Length = 1056 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ccaccaccaccaacaccagcg 329 ||||||||||||||||||||| Sbjct: 44 ccaccaccaccaacaccagcg 64
>ref|XM_330900.1| Neurospora crassa OR74A hypothetical protein (NCU08784.1) partial mRNA Length = 1056 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ccaccaccaccaacaccagcg 329 ||||||||||||||||||||| Sbjct: 44 ccaccaccaccaacaccagcg 64
>gb|DQ088033.1| Desulfovibrio gigas cytochrome bd operon, complete sequence; and Ca2+/Na+ antiporter gene, complete cds Length = 5052 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 cggcgatgcccaccaccacca 320 ||||||||||||||||||||| Sbjct: 3762 cggcgatgcccaccaccacca 3742
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 419 gccgtcgccttcgtggtgcgc 439 ||||||||||||||||||||| Sbjct: 1285531 gccgtcgccttcgtggtgcgc 1285511 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 gcgctctgcgtggcggcgctgctg 142 |||||| ||||||||||||||||| Sbjct: 382448 gcgctcggcgtggcggcgctgctg 382471
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 274 caaggccgccaagccggaggcggcc 298 ||||||||| ||||||||||||||| Sbjct: 445896 caaggccgcaaagccggaggcggcc 445920
>dbj|AK156168.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830010G03 product:Mitochondrial carrier triple repeat 1 homolog [Homo sapiens], full insert sequence Length = 4327 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgtggcggcgctgctggccg 146 ||||||||||||||||||||| Sbjct: 549 gcgtggcggcgctgctggccg 569
>dbj|AK146788.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920055M12 product:Mitochondrial carrier triple repeat 1 homolog [Homo sapiens], full insert sequence Length = 4258 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgtggcggcgctgctggccg 146 ||||||||||||||||||||| Sbjct: 553 gcgtggcggcgctgctggccg 573
>dbj|AK151688.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830034A06 product:Mitochondrial carrier triple repeat 1 homolog [Homo sapiens], full insert sequence Length = 1895 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgtggcggcgctgctggccg 146 ||||||||||||||||||||| Sbjct: 549 gcgtggcggcgctgctggccg 569
>dbj|AK150362.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830005H03 product:Mitochondrial carrier triple repeat 1 homolog [Homo sapiens], full insert sequence Length = 1895 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgtggcggcgctgctggccg 146 ||||||||||||||||||||| Sbjct: 549 gcgtggcggcgctgctggccg 569
>dbj|AK152171.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830053G08 product:Mitochondrial carrier triple repeat 1 homolog [Homo sapiens], full insert sequence Length = 1895 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgtggcggcgctgctggccg 146 ||||||||||||||||||||| Sbjct: 549 gcgtggcggcgctgctggccg 569
>dbj|AK165253.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430004A21 product:Mitochondrial carrier triple repeat 1 homolog [Homo sapiens], full insert sequence Length = 1935 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgtggcggcgctgctggccg 146 ||||||||||||||||||||| Sbjct: 587 gcgtggcggcgctgctggccg 607
>dbj|AK156342.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830017G01 product:Mitochondrial carrier triple repeat 1 homolog [Homo sapiens], full insert sequence Length = 4254 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgtggcggcgctgctggccg 146 ||||||||||||||||||||| Sbjct: 550 gcgtggcggcgctgctggccg 570
>dbj|AK051139.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130005A03 product:hypothetical Mitochondrial energy transfer proteins (carrier protein) containing protein, full insert sequence Length = 2403 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgtggcggcgctgctggccg 146 ||||||||||||||||||||| Sbjct: 587 gcgtggcggcgctgctggccg 607
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 tcggcgccaagcccgaggccgccgt 249 |||||||||||||||| |||||||| Sbjct: 16904493 tcggcgccaagcccgacgccgccgt 16904517
>gb|AE004467.1| Pseudomonas aeruginosa PAO1, section 28 of 529 of the complete genome Length = 12795 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 cctcggcgatgcccaccacca 317 ||||||||||||||||||||| Sbjct: 525 cctcggcgatgcccaccacca 505
>dbj|AK198170.1| Mus musculus cDNA, clone:Y1G0127F07, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000062977, based on BLAT search Length = 144 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgtggcggcgctgctggccg 146 ||||||||||||||||||||| Sbjct: 33 gcgtggcggcgctgctggccg 53
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 gtcgccgtcgccttcgtggtg 436 ||||||||||||||||||||| Sbjct: 208150 gtcgccgtcgccttcgtggtg 208170
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 tcggcgccaagcccgaggccgccgt 249 |||||||||||||||| |||||||| Sbjct: 34306 tcggcgccaagcccgacgccgccgt 34330
>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1163_C07 Length = 107121 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 tcggcgccaagcccgaggccgccgt 249 |||||||||||||||| |||||||| Sbjct: 102184 tcggcgccaagcccgacgccgccgt 102208
>dbj|AK106042.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-E02, full insert sequence Length = 1721 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 tcggcgccaagcccgaggccgccgt 249 |||||||||||||||| |||||||| Sbjct: 601 tcggcgccaagcccgacgccgccgt 625
>gb|AY937239.1| Chlamydomonas incerta plus agglutinin (SAG1) gene, partial cds Length = 13081 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 ttcggcaacgaggggaagacggagg 200 ||||| ||||||||||||||||||| Sbjct: 2318 ttcgggaacgaggggaagacggagg 2294
>dbj|AK059479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F03, full insert sequence Length = 1515 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 tcggcgccaagcccgaggccgccgt 249 |||||||||||||||| |||||||| Sbjct: 486 tcggcgccaagcccgacgccgccgt 510
>emb|AL772376.6| Mouse DNA sequence from clone RP23-30F6 on chromosome 4, complete sequence Length = 237323 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 gcgtggcggcgctgctggccg 146 ||||||||||||||||||||| Sbjct: 44982 gcgtggcggcgctgctggccg 44962
>gb|BC089000.1| Mus musculus mitochondrial carrier triple repeat 1, mRNA (cDNA clone MGC:115765 IMAGE:6418170), complete cds Length = 4211 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gcgtggcggcgctgctggccg 146 ||||||||||||||||||||| Sbjct: 486 gcgtggcggcgctgctggccg 506
>emb|AL662835.11| Mouse DNA sequence from clone RP23-458A23 on chromosome 11, complete sequence Length = 162024 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 304 gatgcccaccaccaccaacaccagc 328 ||||||||||||||||| ||||||| Sbjct: 43540 gatgcccaccaccaccaccaccagc 43516
>ref|NM_124269.1| Arabidopsis thaliana unknown protein AT5G48920 mRNA, complete cds Length = 618 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ccaccaccaccaacaccagc 328 |||||||||||||||||||| Sbjct: 256 ccaccaccaccaacaccagc 275
>ref|NM_114897.2| Arabidopsis thaliana unknown protein AT3G50370 mRNA, complete cds Length = 6917 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ccaccaccaccaacaccagc 328 |||||||||||||||||||| Sbjct: 6354 ccaccaccaccaacaccagc 6373
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 ggccgtggccgccggtgtgg 377 |||||||||||||||||||| Sbjct: 476719 ggccgtggccgccggtgtgg 476738
>ref|XM_549873.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2364 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 agacggaggcgacgccggagatgg 215 ||||||||| |||||||||||||| Sbjct: 317 agacggaggtgacgccggagatgg 340
>ref|XM_510552.1| PREDICTED: Pan troglodytes similar to KIAA1971 protein (LOC453596), mRNA Length = 1776 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ccaagcccgaggccgccgtg 250 |||||||||||||||||||| Sbjct: 200 ccaagcccgaggccgccgtg 219
>ref|XM_482870.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1347 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 gcgtggcggcgctgctggccgtcg 149 ||||||||||||||| |||||||| Sbjct: 170 gcgtggcggcgctgcaggccgtcg 193
>ref|XM_475488.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 321 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 ggcgctctgcgtggcggcgc 137 |||||||||||||||||||| Sbjct: 45 ggcgctctgcgtggcggcgc 64
>ref|XM_472588.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1281 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gtggcggcgctgctggccgt 147 |||||||||||||||||||| Sbjct: 1120 gtggcggcgctgctggccgt 1139
>gb|U40410.1| Caenorhabditis elegans cosmid C54G7, complete sequence Length = 40270 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ccaccaccaccaacaccagc 328 |||||||||||||||||||| Sbjct: 24724 ccaccaccaccaacaccagc 24743
>gb|AY677086.1| Azospirillum brasilense NifA (nifA) gene, partial cds; and unknown genes Length = 3364 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cgtggcggcgctgctggccg 146 |||||||||||||||||||| Sbjct: 1171 cgtggcggcgctgctggccg 1190
>gb|AC008257.6| Drosophila melanogaster clone BACR08A11, complete sequence Length = 170478 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 cgtcggcgtggcagtcgccgtcgc 426 ||||| |||||||||||||||||| Sbjct: 19336 cgtcgacgtggcagtcgccgtcgc 19359
>gb|AC099029.2| Drosophila melanogaster clone BACR09J12, complete sequence Length = 189618 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 ccaccaccaccaacaccagcgcac 332 |||||||||||| ||||||||||| Sbjct: 129457 ccaccaccaccaccaccagcgcac 129434
>gb|AY657643.1| Synthetic construct Peudomonas aeruginosa clone FLH041451.01F PA0843 gene, partial cds Length = 624 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gccgccggtgtggcctgcgg 384 |||||||||||||||||||| Sbjct: 137 gccgccggtgtggcctgcgg 118
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 ggcgctctgcgtggcggcgc 137 |||||||||||||||||||| Sbjct: 33616 ggcgctctgcgtggcggcgc 33597
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 gcgtggcggcgctgctggcc 145 |||||||||||||||||||| Sbjct: 3117121 gcgtggcggcgctgctggcc 3117102
>gb|AC135016.3| Mus musculus BAC clone RP24-244B4 from chromosome 18, complete sequence Length = 177193 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ccaccaccaccaacaccagc 328 |||||||||||||||||||| Sbjct: 19896 ccaccaccaccaacaccagc 19915
>gb|BT011316.1| Arabidopsis thaliana At5g48920 gene, complete cds Length = 618 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ccaccaccaccaacaccagc 328 |||||||||||||||||||| Sbjct: 256 ccaccaccaccaacaccagc 275
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ccgccaagccggaggcggcc 298 |||||||||||||||||||| Sbjct: 4178181 ccgccaagccggaggcggcc 4178200
>ref|XM_747447.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g11740) partial mRNA Length = 795 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 gcccaccaccaccaacacca 326 |||||||||||||||||||| Sbjct: 674 gcccaccaccaccaacacca 655
>gb|BT010840.1| Arabidopsis thaliana At5g48920 mRNA, complete cds Length = 786 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ccaccaccaccaacaccagc 328 |||||||||||||||||||| Sbjct: 324 ccaccaccaccaacaccagc 343
>gb|AC108812.9| Mus musculus chromosome 18, clone RP23-417M2, complete sequence Length = 202340 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ccaccaccaccaacaccagc 328 |||||||||||||||||||| Sbjct: 111865 ccaccaccaccaacaccagc 111884
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tggcggcgctgctggccgtc 148 |||||||||||||||||||| Sbjct: 2058188 tggcggcgctgctggccgtc 2058207
>emb|AL356215.11| Human DNA sequence from clone RP4-607I7 on chromosome 11p11.2-12 Contains the start of the CD44 (CD44 antigen (homing function andnIndian blood group system)) gene, ESTs, STSs, GSSs and a CpG island, complete sequence Length = 150533 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 gcacacactctatcctttcgtgaa 59 |||||||||||||||||| ||||| Sbjct: 148056 gcacacactctatccttttgtgaa 148079
>emb|AL138781.13| Human DNA sequence from clone RP11-83N9 on chromosome 9p34.1-35.1 Contains a novel gene (LOC90120), the LHX3 gene for LIM homeobox protein 3, the gene for a novel protein (DKFZp762A2013) similar to quiescin proteins and seven CpG islands, complete sequence Length = 154918 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 cggaggcggcctcggcgatg 307 |||||||||||||||||||| Sbjct: 103489 cggaggcggcctcggcgatg 103470
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 tctgctcgtggcgctctgcg 128 |||||||||||||||||||| Sbjct: 113294 tctgctcgtggcgctctgcg 113275
>emb|BX649605.1| Aspergillus fumigatus BAC pilot project supercontig; segment 1/3 Length = 345637 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gcccaccaccaccaacacca 326 |||||||||||||||||||| Sbjct: 132264 gcccaccaccaccaacacca 132283
>emb|AL583918.1|MLEPRTN2 Mycobacterium leprae strain TN complete genome; segment 2/10 Length = 344050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 gtggcctgcggcgtcgcggc 393 |||||||||||||||||||| Sbjct: 310945 gtggcctgcggcgtcgcggc 310926
>emb|AL132976.2|ATF11C1 Arabidopsis thaliana DNA chromosome 3, BAC clone F11C1 Length = 111122 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ccaccaccaccaacaccagc 328 |||||||||||||||||||| Sbjct: 77002 ccaccaccaccaacaccagc 76983
>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1485_B09 Length = 66599 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tcgccgtcgccttcgtggtg 436 |||||||||||||||||||| Sbjct: 13385 tcgccgtcgccttcgtggtg 13404
>dbj|AB207102.1| Acidovorax avenae subsp. avenae Hrp gene cluster, complete cds, strain: N1141 Length = 66987 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 ggcgctctgcgtggcggcgctgctggcc 145 ||||||| |||||| ||||||||||||| Sbjct: 1775 ggcgctcggcgtgggggcgctgctggcc 1748
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ccggaggcggcctcggcgat 306 |||||||||||||||||||| Sbjct: 5495912 ccggaggcggcctcggcgat 5495893
>gb|AE011779.1| Xanthomonas axonopodis pv. citri str. 306, section 157 of 469 of the complete genome Length = 10887 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 267 acaactccaaggccgccaagccgg 290 ||||| |||||||||||||||||| Sbjct: 7266 acaacaccaaggccgccaagccgg 7243
>gb|AE012147.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 55 of 460 of the complete genome Length = 12236 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 ccaccaccaacaccagcgca 331 |||||||||||||||||||| Sbjct: 10818 ccaccaccaacaccagcgca 10799
>dbj|AK001127.1| Homo sapiens cDNA FLJ10265 fis, clone HEMBB1001014 Length = 2603 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 gcacacactctatcctttcgtgaa 59 |||||||||||||||||| ||||| Sbjct: 135 gcacacactctatccttttgtgaa 112
>ref|NM_136711.2| Drosophila melanogaster CG11866-RA (CG11866), mRNA Length = 2491 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 309 ccaccaccaccaacaccagcgcac 332 |||||||||||| ||||||||||| Sbjct: 581 ccaccaccaccaccaccagcgcac 604
>ref|XM_944038.1| PREDICTED: Homo sapiens hypothetical protein LOC650079 (LOC650079), mRNA Length = 1271 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 cggaggcggcctcggcgatg 307 |||||||||||||||||||| Sbjct: 284 cggaggcggcctcggcgatg 303
>ref|XM_931560.1| PREDICTED: Homo sapiens hypothetical protein LOC643461 (LOC643461), mRNA Length = 1271 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 cggaggcggcctcggcgatg 307 |||||||||||||||||||| Sbjct: 284 cggaggcggcctcggcgatg 303
>gb|AY060879.1| Drosophila melanogaster GM04147 full length cDNA Length = 2462 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 309 ccaccaccaccaacaccagcgcac 332 |||||||||||| ||||||||||| Sbjct: 543 ccaccaccaccaccaccagcgcac 566
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 tggcgctctgcgtggcggcg 136 |||||||||||||||||||| Sbjct: 3401924 tggcgctctgcgtggcggcg 3401943
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 ccaccaccaacaccagcgca 331 |||||||||||||||||||| Sbjct: 610636 ccaccaccaacaccagcgca 610617
>ref|NM_061099.1| Caenorhabditis elegans F49B2.3 (F49B2.3) mRNA, complete cds Length = 969 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ccaccaccaccaacaccagc 328 |||||||||||||||||||| Sbjct: 97 ccaccaccaccaacaccagc 78
>gb|AC008339.2|AC008339 Drosophila melanogaster, chromosome 2R, region 42A-42A, BAC clone BACR13P06, complete sequence Length = 180699 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 cgtcggcgtggcagtcgccgtcgc 426 ||||| |||||||||||||||||| Sbjct: 133462 cgtcgacgtggcagtcgccgtcgc 133485
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 gcgtggcggcgctgctggccgtcg 149 ||||||||||||||| |||||||| Sbjct: 23058562 gcgtggcggcgctgcaggccgtcg 23058585
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 ggcgctctgcgtggcggcgc 137 |||||||||||||||||||| Sbjct: 24347826 ggcgctctgcgtggcggcgc 24347807
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tcgccgtcgccttcgtggtg 436 |||||||||||||||||||| Sbjct: 40214433 tcgccgtcgccttcgtggtg 40214452 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 agacggaggcgacgccggagatgg 215 ||||||||| |||||||||||||| Sbjct: 537227 agacggaggtgacgccggagatgg 537250
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 ggcggcctcggcgatgccca 311 |||||||||||||||||||| Sbjct: 2491559 ggcggcctcggcgatgccca 2491578
>emb|BX005183.9| Zebrafish DNA sequence from clone CH211-136A14 in linkage group 3, complete sequence Length = 168366 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ccaccaccaccaacaccagc 328 |||||||||||||||||||| Sbjct: 135216 ccaccaccaccaacaccagc 135235
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tcgccgtcgccttcgtggtg 436 |||||||||||||||||||| Sbjct: 80211 tcgccgtcgccttcgtggtg 80230
>gb|AY205563.1| Chlamydomonas reinhardtii genomic sequence Length = 7479 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ccaccaccaccaacaccagc 328 |||||||||||||||||||| Sbjct: 1491 ccaccaccaccaacaccagc 1510
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 gtggcctgcggcgtcgcggc 393 |||||||||||||||||||| Sbjct: 7509097 gtggcctgcggcgtcgcggc 7509078
>gb|AE004519.1| Pseudomonas aeruginosa PAO1, section 80 of 529 of the complete genome Length = 11622 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 gccgccggtgtggcctgcgg 384 |||||||||||||||||||| Sbjct: 2884 gccgccggtgtggcctgcgg 2903
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 ggcggcctcggcgatgcccaccac 315 |||||||||||| ||||||||||| Sbjct: 891968 ggcggcctcggccatgcccaccac 891945
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ccaccaccaccaacaccagc 328 |||||||||||||||||||| Sbjct: 4561260 ccaccaccaccaacaccagc 4561241
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 ctgctcgtggcgctctgcgtggcg 133 ||||||| |||||||||||||||| Sbjct: 5824633 ctgctcgcggcgctctgcgtggcg 5824656
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 agacggaggcgacgccggagatgg 215 ||||||||| |||||||||||||| Sbjct: 177428 agacggaggtgacgccggagatgg 177451
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 agacggaggcgacgccggagatgg 215 ||||||||| |||||||||||||| Sbjct: 11832 agacggaggtgacgccggagatgg 11855
>dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1425D05, complete sequence Length = 66450 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tcgccgtcgccttcgtggtg 436 |||||||||||||||||||| Sbjct: 5783 tcgccgtcgccttcgtggtg 5802
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0701E03 Length = 183245 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 agcccgaggccgccgtgctc 253 |||||||||||||||||||| Sbjct: 162607 agcccgaggccgccgtgctc 162588
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 agcccgaggccgccgtgctc 253 |||||||||||||||||||| Sbjct: 47853 agcccgaggccgccgtgctc 47834
>dbj|AK109407.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C01, full insert sequence Length = 1270 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 agcccgaggccgccgtgctc 253 |||||||||||||||||||| Sbjct: 652 agcccgaggccgccgtgctc 633
>dbj|AK109351.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G08, full insert sequence Length = 1265 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 agcccgaggccgccgtgctc 253 |||||||||||||||||||| Sbjct: 647 agcccgaggccgccgtgctc 628
>dbj|AB017061.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19E20 Length = 61712 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ccaccaccaccaacaccagc 328 |||||||||||||||||||| Sbjct: 11724 ccaccaccaccaacaccagc 11743
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 gcgtggcggcgctgctggccgtcg 149 ||||||||||||||| |||||||| Sbjct: 118290 gcgtggcggcgctgcaggccgtcg 118313
>dbj|AK121647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058N21, full insert sequence Length = 1800 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gtggcggcgctgctggccgt 147 |||||||||||||||||||| Sbjct: 1520 gtggcggcgctgctggccgt 1539
>dbj|AK098967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084E12, full insert sequence Length = 1264 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 agcccgaggccgccgtgctc 253 |||||||||||||||||||| Sbjct: 650 agcccgaggccgccgtgctc 631
>dbj|AK070299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047F19, full insert sequence Length = 1315 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 agcccgaggccgccgtgctc 253 |||||||||||||||||||| Sbjct: 701 agcccgaggccgccgtgctc 682
>gb|AC007121.1|AC007121 Drosophila melanogaster, chromosome 2R, region 42A8-42A16, P1 clones DS06954 and DS05325, complete sequence Length = 135182 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 cgtcggcgtggcagtcgccgtcgc 426 ||||| |||||||||||||||||| Sbjct: 11476 cgtcgacgtggcagtcgccgtcgc 11453
>gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19 of 73 of the complete sequence Length = 275390 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 309 ccaccaccaccaacaccagcgcac 332 |||||||||||| ||||||||||| Sbjct: 270572 ccaccaccaccaccaccagcgcac 270595
>gb|AE003784.5| Drosophila melanogaster chromosome 2R, section 5 of 73 of the complete sequence Length = 305162 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 cgtcggcgtggcagtcgccgtcgc 426 ||||| |||||||||||||||||| Sbjct: 195949 cgtcgacgtggcagtcgccgtcgc 195972
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 tctgctcgtggcgctctgcgtggc 132 ||||||||||||||| |||||||| Sbjct: 3943854 tctgctcgtggcgctgtgcgtggc 3943831
>gb|AC005974.1|AC005974 Drosophila melanogaster, chromosome 2R, region 46E1-46F6, P1 clones DS05033, DS01913, and DS05181, complete sequence Length = 158983 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 ccaccaccaccaacaccagcgcac 332 |||||||||||| ||||||||||| Sbjct: 94601 ccaccaccaccaccaccagcgcac 94578
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cgtggcggcgctgctggccg 146 |||||||||||||||||||| Sbjct: 2787743 cgtggcggcgctgctggccg 2787724
>emb|Z81543.1|CEF49B2 Caenorhabditis elegans Cosmid F49B2, complete sequence Length = 38086 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ccaccaccaccaacaccagc 328 |||||||||||||||||||| Sbjct: 15927 ccaccaccaccaacaccagc 15908
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccttcttcggcgccaagccc 238 |||||||||||||||||||| Sbjct: 4651124 ccttcttcggcgccaagccc 4651143
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gtggcggcgctgctggccgt 147 |||||||||||||||||||| Sbjct: 67238 gtggcggcgctgctggccgt 67257
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 292 ggcggcctcggcgatgcccaccac 315 |||||||||||| ||||||||||| Sbjct: 560373 ggcggcctcggccatgcccaccac 560350
>gb|M17745.1|PSEPLCRPA P.aeruginosa phospholipase C (plcR) gene, complete cds Length = 911 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gccgccggtgtggcctgcgg 384 |||||||||||||||||||| Sbjct: 158 gccgccggtgtggcctgcgg 139 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,174,622 Number of Sequences: 3902068 Number of extensions: 3174622 Number of successful extensions: 152704 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 149243 Number of HSP's gapped (non-prelim): 3457 length of query: 449 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 427 effective length of database: 17,147,199,772 effective search space: 7321854302644 effective search space used: 7321854302644 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
