ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast69d05 |
|---|---|
| Clone Library Name | barley_pub |
>BTF3_HUMAN (P20290) Transcription factor BTF3 (RNA polymerase B transcription| factor 3) Length = 206 Score = 89.0 bits (219), Expect = 5e-18 Identities = 48/117 (41%), Positives = 70/117 (59%), Gaps = 1/117 (0%) Frame = +2 Query: 98 MNKERLMKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQSTLKRVGVNTIPAIEEVNIF 277 MN+E+L K+ +LQ +LK++GVN I IEEVN+F Sbjct: 50 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMF 109 Query: 278 KDD-LVIQFLNPKVQASIAAXTWVVSGTPQTKKLQDVLPSIINQLGPDNMEHLKRIA 445 + VI F NPKVQAS+AA T+ ++G +TK+L ++LPSI+NQLG D++ L+R+A Sbjct: 110 TNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLA 166
>BTF3_MOUSE (Q64152) Transcription factor BTF3 (RNA polymerase B transcription| factor 3) Length = 204 Score = 89.0 bits (219), Expect = 5e-18 Identities = 48/117 (41%), Positives = 70/117 (59%), Gaps = 1/117 (0%) Frame = +2 Query: 98 MNKERLMKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQSTLKRVGVNTIPAIEEVNIF 277 MN+E+L K+ +LQ +LK++GVN I IEEVN+F Sbjct: 48 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMF 107 Query: 278 KDD-LVIQFLNPKVQASIAAXTWVVSGTPQTKKLQDVLPSIINQLGPDNMEHLKRIA 445 + VI F NPKVQAS+AA T+ ++G +TK+L ++LPSI+NQLG D++ L+R+A Sbjct: 108 TNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLA 164
>BTF3_CAEEL (Q18885) Transcription factor BTF3 homolog (Inhibitor of cell death| 1) Length = 161 Score = 88.2 bits (217), Expect = 8e-18 Identities = 42/80 (52%), Positives = 60/80 (75%), Gaps = 1/80 (1%) Frame = +2 Query: 209 RLQSTLKRVGVNTIPAIEEVNIFKDD-LVIQFLNPKVQASIAAXTWVVSGTPQTKKLQDV 385 +LQS LK++ V IP IEEVN+ KDD VI F NPKVQ S+ A T+ V+G+ K++ ++ Sbjct: 45 KLQSNLKKLSVTNIPGIEEVNMIKDDGTVIHFNNPKVQTSVPANTFSVTGSADNKQITEM 104 Query: 386 LPSIINQLGPDNMEHLKRIA 445 LP I+NQLGP+++ HLK++A Sbjct: 105 LPGILNQLGPESLTHLKKLA 124
>BT3L4_MOUSE (Q9CQH7) Transcription factor BTF3 homolog 4 (Basic transcription| factor 3-like 4) Length = 158 Score = 84.0 bits (206), Expect = 2e-16 Identities = 44/117 (37%), Positives = 68/117 (58%), Gaps = 1/117 (0%) Frame = +2 Query: 98 MNKERLMKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQSTLKRVGVNTIPAIEEVNIF 277 MN+E+L K+ +LQS+LK++ VN I IEEVN+ Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60 Query: 278 KDD-LVIQFLNPKVQASIAAXTWVVSGTPQTKKLQDVLPSIINQLGPDNMEHLKRIA 445 KDD VI F NPKVQAS++A T+ ++G + K + ++LP I++QLG D++ L+++A Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLA 117
>BT3L4_HUMAN (Q96K17) Transcription factor BTF3 homolog 4 (Basic transcription| factor 3-like 4) Length = 158 Score = 84.0 bits (206), Expect = 2e-16 Identities = 44/117 (37%), Positives = 68/117 (58%), Gaps = 1/117 (0%) Frame = +2 Query: 98 MNKERLMKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQSTLKRVGVNTIPAIEEVNIF 277 MN+E+L K+ +LQS+LK++ VN I IEEVN+ Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60 Query: 278 KDD-LVIQFLNPKVQASIAAXTWVVSGTPQTKKLQDVLPSIINQLGPDNMEHLKRIA 445 KDD VI F NPKVQAS++A T+ ++G + K + ++LP I++QLG D++ L+++A Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLA 117
>BT3L3_HUMAN (Q13892) Transcription factor BTF3 homolog 3 (Basic transcription| factor 3-like 3) Length = 214 Score = 72.4 bits (176), Expect = 5e-13 Identities = 35/80 (43%), Positives = 58/80 (72%), Gaps = 1/80 (1%) Frame = +2 Query: 209 RLQSTLKRVGVNTIPAIEEVNIFKDD-LVIQFLNPKVQASIAAXTWVVSGTPQTKKLQDV 385 +LQ +LK++ VN I IE+VN+F + VI F NPK QAS+A T+ ++G + K++ ++ Sbjct: 73 KLQFSLKKLQVNNISGIEKVNMFTNQGTVIHFNNPKFQASLAVNTFTITGHAEAKQVTEM 132 Query: 386 LPSIINQLGPDNMEHLKRIA 445 LPS+++QLG D++ L+R+A Sbjct: 133 LPSVLSQLGADSLTSLRRLA 152
>BT3L1_HUMAN (Q13890) Transcription factor BTF3 homolog 1 (Basic transcription| factor 3-like 1) Length = 111 Score = 62.8 bits (151), Expect = 4e-10 Identities = 33/64 (51%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Frame = +2 Query: 209 RLQSTLKRVGVNTIPAIEEVNIFKDD-LVIQFLNPKVQASIAAXTWVVSGTPQTKKLQDV 385 + Q +LK++GVN IP IEEVN+F VI F NP+VQAS+AA T+ ++G +TK+L ++ Sbjct: 39 KFQFSLKKLGVNNIPGIEEVNMFTHQGTVIHFNNPEVQASLAANTFTMTGHAETKQLTEM 98 Query: 386 LPSI 397 L SI Sbjct: 99 LLSI 102
>BTF3_SCHPO (Q92371) Transcription factor BTF3 homolog| Length = 151 Score = 60.8 bits (146), Expect = 1e-09 Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 1/80 (1%) Frame = +2 Query: 209 RLQSTLKRVGVNTIPAIEEVNIFKDDL-VIQFLNPKVQASIAAXTWVVSGTPQTKKLQDV 385 ++Q LK++ + + I+EVN+FK+D VI F P V +S+ T + G + K L ++ Sbjct: 40 KVQGALKKLNMQNLAGIQEVNMFKEDGGVINFRAPTVHSSLPNETTAIYGKAEEKTLSEI 99 Query: 386 LPSIINQLGPDNMEHLKRIA 445 LP I+N LGP+++ L+++A Sbjct: 100 LPGILNNLGPESLTALRQMA 119
>EGD1_YEAST (Q02642) BTF3 homolog EGD1 (GAL4 DNA-binding enhancer protein 1)| Length = 157 Score = 59.3 bits (142), Expect = 4e-09 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 1/80 (1%) Frame = +2 Query: 209 RLQSTLKRVGVNTIPAIEEVNIFKDD-LVIQFLNPKVQASIAAXTWVVSGTPQTKKLQDV 385 +LQS L ++ TI + E N FKDD V+ F VQ + T V G PQ K LQD+ Sbjct: 43 KLQSQLAKLHAVTIDNVAEANFFKDDGKVMHFNKVGVQVAAQHNTSVFYGLPQEKNLQDL 102 Query: 386 LPSIINQLGPDNMEHLKRIA 445 P II+QLGP+ ++ L ++A Sbjct: 103 FPGIISQLGPEAIQALSQLA 122
>BTT1_YEAST (P40314) BTF3 homolog BTT1| Length = 149 Score = 41.6 bits (96), Expect = 0.001 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Frame = +2 Query: 209 RLQSTLKRVGVNTIPAIEEVNIFKDD-LVIQFLNPKVQASIAAXTWVVSGTPQTKKLQDV 385 +LQ+ L ++ TI + E N FK + V+ F + VQ + ++ G P+ L + Sbjct: 43 KLQAELHKLHPMTIENVAEANFFKKNGKVLHFNSAVVQIAPQCNLTMIHGQPKENTLNGL 102 Query: 386 LPSIINQLGPDNMEHLKRIA 445 PS+ +QLG +E+L +A Sbjct: 103 YPSVASQLGSQELEYLTGLA 122
>KAD2_SYNY3 (P72641) Probable adenylate kinase 2 (EC 2.7.4.3) (ATP-AMP| transphosphorylase 2) Length = 181 Score = 33.1 bits (74), Expect = 0.32 Identities = 13/60 (21%), Positives = 30/60 (50%) Frame = +2 Query: 233 VGVNTIPAIEEVNIFKDDLVIQFLNPKVQASIAAXTWVVSGTPQTKKLQDVLPSIINQLG 412 +G+ P +E ++ D ++I+F+ ++ W++ G P+T + L ++ LG Sbjct: 45 LGIKAKPYVERGDLLPDPMMIEFIQQRLVQEDGGQGWILEGYPRTAFQAEELDFLLEDLG 104
>KAD2_ANASP (Q8Z0M3) Probable adenylate kinase 2 (EC 2.7.4.3) (ATP-AMP| transphosphorylase 2) Length = 184 Score = 32.0 bits (71), Expect = 0.71 Identities = 15/65 (23%), Positives = 35/65 (53%) Frame = +2 Query: 218 STLKRVGVNTIPAIEEVNIFKDDLVIQFLNPKVQASIAAXTWVVSGTPQTKKLQDVLPSI 397 S L +G + P + + + D+++I+ + +++ S WV+ G P+T + L + Sbjct: 40 SHLSELGRHAQPYMIKGELVPDEMIIELIRLRLKKSDVIDGWVLEGYPRTAFQAEELDFL 99 Query: 398 INQLG 412 +++LG Sbjct: 100 LDELG 104
>CITG_KLEPN (P45414) 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase| (EC 2.7.8.25) (2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase) Length = 302 Score = 30.4 bits (67), Expect = 2.1 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = +2 Query: 215 QSTLKRVGVNTIPAIEEVNIFKDDLVIQFLNPKVQASIAAXTWVVSGTP 361 Q L + GV +E + F D+L+ + L+P A + A TW +S P Sbjct: 247 QRLLWQGGVLADGGLEALRQFDDELIARHLSPGGSADLLAVTWFLSAFP 295
>LAMC3_MOUSE (Q9R0B6) Laminin gamma-3 chain precursor (Laminin 12 gamma 3| subunit) Length = 1581 Score = 29.6 bits (65), Expect = 3.5 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = +1 Query: 304 QPQSASVHRRXHMGGQWDSPDQEATRCSSFYHQPIGP*QHGAPEEDRR 447 +P+S ++++R + G W+ + C Y +P G + P ED R Sbjct: 150 RPESFAIYKRTYASGPWEPYQYYSASCQKTYGRPEG--HYLRPGEDER 195
>LAMC3_HUMAN (Q9Y6N6) Laminin gamma-3 chain precursor (Laminin 12 gamma 3| subunit) Length = 1587 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = +1 Query: 304 QPQSASVHRRXHMGGQWDSPDQEATRCSSFYHQPIGP*QHGAPEEDRR 447 +P+S ++++R G W+ + C Y +P G Q+ P ED R Sbjct: 141 RPESFAIYKRSRADGPWEPYQFYSASCQKTYGRPEG--QYLRPGEDER 186
>ATPG_ANASP (P12408) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 315 Score = 28.9 bits (63), Expect = 6.0 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = +2 Query: 236 GVNTIPAIEEVNIFKDDLVIQFLNPKVQASIAAXTWVVSGTPQTKKLQDVLP 391 G+ IP +E N D+L+ FL+ KV T VS +Q +LP Sbjct: 141 GLEQIPTADEANKIADELLSLFLSEKVDRIELVYTRFVSLVSSRPVIQTLLP 192
>ERG27_KLULA (Q6CJC2) 3-keto-steroid reductase (EC 1.1.1.270)| Length = 346 Score = 28.5 bits (62), Expect = 7.9 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%) Frame = +2 Query: 224 LKRVGVNT---IPAIEEVNIFKDDLVIQFLNPKVQASIAAXTWV--VSGTPQTKKLQDV 385 ++RVGV + + + + N+F +IQ L P +QA WV + P+ LQD+ Sbjct: 134 IQRVGVKSKDGMGLVFQANVFGPYYLIQKLLPLLQAGQGTVVWVSSIMSAPKYLSLQDI 192
>ATPG_HELHP (Q7VJ22) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 297 Score = 28.5 bits (62), Expect = 7.9 Identities = 16/59 (27%), Positives = 26/59 (44%) Frame = +2 Query: 227 KRVGVNTIPAIEEVNIFKDDLVIQFLNPKVQASIAAXTWVVSGTPQTKKLQDVLPSIIN 403 K +G++ P E+ F +++V FLN I + Q + Q +LP IN Sbjct: 145 KAIGLSAAPTFEKAEAFIENVVEDFLNGATDEVIIVHNGFKNMISQELESQAILPLTIN 203 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.132 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,533,858 Number of Sequences: 219361 Number of extensions: 608899 Number of successful extensions: 1802 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1776 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1794 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
