>CRR1_ASHGO (Q75A41) Probable glycosidase CRR1 precursor (EC 3.2.-.-)|
           (CRH-related protein 1)
          Length = 450

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 262 RLQHHHRALPHVPSLPVSRT 203
           R QHH R+LPHV + P++ T
Sbjct: 430 RQQHHRRSLPHVEAPPITNT 449

>ATPD_HUMAN (P30049) ATP synthase delta chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 168

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 280 RRPGLGRLQHHHRALPHVPSLPVSRTRANE 191
           RRPGLGRL  H RA     + P + +  N+
Sbjct: 8   RRPGLGRLVRHARAYAEAAAAPAAASGPNQ 37

>CACP_COLLI (P52826) Carnitine O-acetyltransferase precursor (EC 2.3.1.7)|
           (Carnitine acetylase) (CAT) (Carnitine
           acetyltransferase) (CrAT)
          Length = 627

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 265 GRLQHHHRALPHVPSLPVSRT 203
           GR Q H  ALPH+P  P+ +T
Sbjct: 27  GRFQLHQEALPHLPVPPLQQT 47

>APEX1_BOVIN (P23196) DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)|
           (AP endonuclease 1) (APEX nuclease) (APEN)
          Length = 317

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +2

Query: 197 RPGARDRERRDMGEGAVVVLEPPKPR-SPRG 286
           + GA+  E+  +GEGAV+  +PP  + SP G
Sbjct: 26  KAGAKKNEKEAVGEGAVLYEDPPDQKTSPSG 56

>PDGFA_XENLA (P13698) Platelet-derived growth factor A chain precursor (PDGF|
           A-chain) (Platelet-derived growth factor alpha
           polypeptide) (PDGF-1)
          Length = 226

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 253 HHHRALPHVPSLPVSRTRANEEGLPS 176
           HH+R +P   S+P  R R+ EE +P+
Sbjct: 74  HHNRLVPEKRSVPSRRKRSVEEAVPA 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,512,998
Number of Sequences: 219361
Number of extensions: 323555
Number of successful extensions: 1248
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)