ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast69c08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04, complete sequence Length = 176678 Score = 244 bits (123), Expect = 2e-61 Identities = 150/159 (94%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 145375 ctgctacttcaacaactactccctctcccagccccgccacttctgccgcgcctgccgccg 145316 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgcca 120 ||||||||||||||||||||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 145315 ctactggacccgcggcggcgcgctccgcaacgtccccgtcggcggcggctaccgccgcca 145256 Query: 121 cgccaagcgcgccaaacccaagcaggcggcggcggcggg 159 ||||||||||||||| ||||||| |||| | |||||||| Sbjct: 145255 cgccaagcgcgccaagcccaagccggcgtccgcggcggg 145217 Score = 105 bits (53), Expect = 1e-19 Identities = 59/61 (96%) Strand = Plus / Minus Query: 300 tcctgccgccgctgcttcgcctcgcggacttcgacgccatgagcctcggctccaccttct 359 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 145085 tcctgccgccgctgctccgcctcgccgacttcgacgccatgagcctcggctccaccttct 145026 Query: 360 c 360 | Sbjct: 145025 c 145025
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 244 bits (123), Expect = 2e-61 Identities = 150/159 (94%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 627976 ctgctacttcaacaactactccctctcccagccccgccacttctgccgcgcctgccgccg 627917 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgcca 120 ||||||||||||||||||||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 627916 ctactggacccgcggcggcgcgctccgcaacgtccccgtcggcggcggctaccgccgcca 627857 Query: 121 cgccaagcgcgccaaacccaagcaggcggcggcggcggg 159 ||||||||||||||| ||||||| |||| | |||||||| Sbjct: 627856 cgccaagcgcgccaagcccaagccggcgtccgcggcggg 627818 Score = 105 bits (53), Expect = 1e-19 Identities = 59/61 (96%) Strand = Plus / Minus Query: 300 tcctgccgccgctgcttcgcctcgcggacttcgacgccatgagcctcggctccaccttct 359 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 627686 tcctgccgccgctgctccgcctcgccgacttcgacgccatgagcctcggctccaccttct 627627 Query: 360 c 360 | Sbjct: 627626 c 627626 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 53 tgccgccgctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtac 112 |||||||||||||||||| |||||| ||||||||||||| || || |||||||||| | Sbjct: 21410609 tgccgccgctactggaccaagggcggctcgctccggaacgtgcccgtcggcggcgggtgc 21410668 Query: 113 cgc 115 ||| Sbjct: 21410669 cgc 21410671 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 aggcggcggcggcgggggcaccggc 168 ||||||||||||||| ||||||||| Sbjct: 20675810 aggcggcggcggcggcggcaccggc 20675786 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcac 164 |||||||||||||||||||| Sbjct: 20145123 ggcggcggcggcgggggcac 20145104 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 aacggcggcggcggcaacct 291 |||||||||||||||||||| Sbjct: 19672995 aacggcggcggcggcaacct 19672976 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 caagcaggcggcggcggcgg 158 |||||||||||||||||||| Sbjct: 1107061 caagcaggcggcggcggcgg 1107042
>dbj|AK108933.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-A09, full insert sequence Length = 1520 Score = 244 bits (123), Expect = 2e-61 Identities = 150/159 (94%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 310 ctgctacttcaacaactactccctctcccagccccgccacttctgccgcgcctgccgccg 369 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgcca 120 ||||||||||||||||||||||||||| |||||||| || |||||||| ||||||||||| Sbjct: 370 ctactggacccgcggcggcgcgctccgcaacgtccccgtcggcggcggctaccgccgcca 429 Query: 121 cgccaagcgcgccaaacccaagcaggcggcggcggcggg 159 ||||||||||||||| ||||||| |||| | |||||||| Sbjct: 430 cgccaagcgcgccaagcccaagccggcgtccgcggcggg 468 Score = 105 bits (53), Expect = 1e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 300 tcctgccgccgctgcttcgcctcgcggacttcgacgccatgagcctcggctccaccttct 359 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 600 tcctgccgccgctgctccgcctcgccgacttcgacgccatgagcctcggctccaccttct 659 Query: 360 c 360 | Sbjct: 660 c 660
>emb|X79935.1|ZMDOF3 Z.mays Dof3 mRNA Length = 1230 Score = 192 bits (97), Expect = 7e-46 Identities = 133/145 (91%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||| Sbjct: 133 ctgctacttcaacaactactccctcacgcagccgcgccacttctgccgggcctgccgccg 192 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgcca 120 ||||||||| || |||||||||||||| ||||| || || || ||||| ||||||||||| Sbjct: 193 ctactggacgcgtggcggcgcgctccgcaacgtgccggtcggtggcggataccgccgcca 252 Query: 121 cgccaagcgcgccaaacccaagcag 145 ||||||||||||||| ||||||||| Sbjct: 253 cgccaagcgcgccaagcccaagcag 277 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 302 ctgccgccgctgcttcgcctcgcggacttcgacgccatgagcctcggctccaccttctcc 361 ||||||||||| | ||||| || ||||||||||| |||||||||||||||| ||||||| Sbjct: 434 ctgccgccgctcgtccgcctagcagacttcgacgcaatgagcctcggctccagcttctcc 493
>emb|AJ312326.1|HVU312326 Hordeum vulgare dof140 gene for dof zinc finger protein Length = 795 Score = 168 bits (85), Expect = 1e-38 Identities = 118/129 (91%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| Sbjct: 267 ctgctacttcaacaactactccctcacgcagccccgccacttttgccgcgcatgccgccg 326 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgcca 120 ||||||||||||||| ||||||||||| ||| |||| |||| |||||||| |||||||| Sbjct: 327 ctactggacccgcggtggcgcgctccgcaacatccccattggtggcgggtatcgccgcca 386 Query: 121 cgccaagcg 129 |||||||| Sbjct: 387 tgccaagcg 395
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 147 bits (74), Expect = 3e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||| || |||||||| |||||||||||| || |||||||| Sbjct: 8875 ctgctacttcaacaactactcgctgtcgcagccgcgccacttctgcaaggcttgccgccg 8816 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgcca 120 ||||||||| ||||||||||||||||| |||||||| || |||||||||| ||||||| | Sbjct: 8815 ctactggacgcgcggcggcgcgctccgcaacgtccccgtcggcggcgggtgccgccgcaa 8756 Query: 121 cgccaagcgc 130 | |||||||| Sbjct: 8755 caccaagcgc 8746
>ref|XM_477205.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1534 Score = 139 bits (70), Expect = 9e-30 Identities = 106/118 (89%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||||||| | |||||||||||||||||| || |||||||| Sbjct: 268 ctgctacttcaacaactactccctcacccagccccgccacttctgcaaggcttgccgccg 327 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||||||||||||||||| ||||| |||||||| || |||||||| | ||||||| Sbjct: 328 ctactggacccgcggcggcgccctccgcaacgtccccgtcggcggcggcttccgccgc 385
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 139 bits (70), Expect = 9e-30 Identities = 106/118 (89%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||||||| | |||||||||||||||||| || |||||||| Sbjct: 7637529 ctgctacttcaacaactactccctcacccagccccgccacttctgcaaggcttgccgccg 7637470 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||||||||||||||||| ||||| |||||||| || |||||||| | ||||||| Sbjct: 7637469 ctactggacccgcggcggcgccctccgcaacgtccccgtcggcggcggcttccgccgc 7637412 Score = 83.8 bits (42), Expect = 4e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||||| || |||||||| || ||||||||| || ||| || Sbjct: 19309208 ctgctactacaacaactactcgctgtcgcagccgcggcacttctgcaaggcgtgcaagcg 19309267 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggt 110 ||||||||| ||||||||| |||| ||||||||||| || |||||||||| Sbjct: 19309268 ctactggacgcgcggcggcacgctgcggaacgtccccgtcggcggcgggt 19309317 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcac 164 |||||||||||||||||||| Sbjct: 7829055 ggcggcggcggcgggggcac 7829036 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcac 164 |||||||||||||||||||| Sbjct: 5354861 ggcggcggcggcgggggcac 5354880
>dbj|AK068542.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155H18, full insert sequence Length = 1534 Score = 139 bits (70), Expect = 9e-30 Identities = 106/118 (89%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||||||| | |||||||||||||||||| || |||||||| Sbjct: 268 ctgctacttcaacaactactccctcacccagccccgccacttctgcaaggcttgccgccg 327 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||||||||||||||||| ||||| |||||||| || |||||||| | ||||||| Sbjct: 328 ctactggacccgcggcggcgccctccgcaacgtccccgtcggcggcggcttccgccgc 385
>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0407H12 Length = 167754 Score = 139 bits (70), Expect = 9e-30 Identities = 106/118 (89%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||||||| | |||||||||||||||||| || |||||||| Sbjct: 142939 ctgctacttcaacaactactccctcacccagccccgccacttctgcaaggcttgccgccg 142880 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||||||||||||||||| ||||| |||||||| || |||||||| | ||||||| Sbjct: 142879 ctactggacccgcggcggcgccctccgcaacgtccccgtcggcggcggcttccgccgc 142822
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 137 bits (69), Expect = 3e-29 Identities = 105/117 (89%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 9332580 ctgctactacaacaactactccctctcccagccccgccacttctgcaagacctgccgccg 9332521 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccg 117 ||||||||| ||||||||| ||||||| |||||||| || |||||||||| |||||| Sbjct: 9332520 ctactggacgcgcggcggctcgctccgcaacgtccccgtcggcggcgggtgccgccg 9332464 Score = 131 bits (66), Expect = 2e-27 Identities = 105/118 (88%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||| ||||||||||| |||||||||||| | |||||||| Sbjct: 34151861 ctgctacttcaacaactactcgctctcgcagccgcgccacttctgcaagacgtgccgccg 34151920 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||||| |||||||| |||||||| |||||||| || |||||||||| ||||||| Sbjct: 34151921 ctactggacgcgcggcggagcgctccgcaacgtccccgtcggcggcgggtgccgccgc 34151978 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | |||||||| |||||||||||||||||||||||||| Sbjct: 23283136 ctgctactacaacaactacaacacgtcgcagccgcgccacttctgccgcgcctgccgccg 23283077 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccc 96 ||||||||| | ||||||| | ||||| |||||||| Sbjct: 23283076 ctactggacgctcggcggctccctccgcaacgtccc 23283041 Score = 69.9 bits (35), Expect = 7e-09 Identities = 95/115 (82%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||| | ||||| |||||||||||| | |||||||| Sbjct: 31359610 ctgctactacaacaactacaacctcacccagccgcgccacttctgcaagacgtgccgccg 31359551 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgc 115 ||||||||| |||||||||||||| |||||||| | |||||||||| |||| Sbjct: 31359550 gtactggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggtgccgc 31359496 Score = 48.1 bits (24), Expect = 0.024 Identities = 87/108 (80%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||| ||||| |||||||||||| | ||||| | Sbjct: 21407730 ctgctactacaacaactacagcctcagccagccgcgccacttctgcaagacgtgccggag 21407789 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 21407790 gtactggaccaagggcggcgcgctccgcaacgtcccagtcggcggcgg 21407837 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgccg 434 ||||||||||||||||||||| Sbjct: 1651090 gcggcggcggtggtggcgccg 1651070 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||||||| ||||| Sbjct: 7581645 ggcggcggcggcgggggcgccggc 7581622
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 137 bits (69), Expect = 3e-29 Identities = 105/117 (89%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 29980 ctgctactacaacaactactccctctcccagccccgccacttctgcaagacctgccgccg 29921 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccg 117 ||||||||| ||||||||| ||||||| |||||||| || |||||||||| |||||| Sbjct: 29920 ctactggacgcgcggcggctcgctccgcaacgtccccgtcggcggcgggtgccgccg 29864
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 137 bits (69), Expect = 3e-29 Identities = 105/117 (89%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 9330475 ctgctactacaacaactactccctctcccagccccgccacttctgcaagacctgccgccg 9330416 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccg 117 ||||||||| ||||||||| ||||||| |||||||| || |||||||||| |||||| Sbjct: 9330415 ctactggacgcgcggcggctcgctccgcaacgtccccgtcggcggcgggtgccgccg 9330359 Score = 131 bits (66), Expect = 2e-27 Identities = 105/118 (88%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||| ||||||||||| |||||||||||| | |||||||| Sbjct: 34242333 ctgctacttcaacaactactcgctctcgcagccgcgccacttctgcaagacgtgccgccg 34242392 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||||| |||||||| |||||||| |||||||| || |||||||||| ||||||| Sbjct: 34242393 ctactggacgcgcggcggagcgctccgcaacgtccccgtcggcggcgggtgccgccgc 34242450 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | |||||||| |||||||||||||||||||||||||| Sbjct: 23276164 ctgctactacaacaactacaacacgtcgcagccgcgccacttctgccgcgcctgccgccg 23276105 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccc 96 ||||||||| | ||||||| | ||||| |||||||| Sbjct: 23276104 ctactggacgctcggcggctccctccgcaacgtccc 23276069 Score = 69.9 bits (35), Expect = 7e-09 Identities = 95/115 (82%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||| | ||||| |||||||||||| | |||||||| Sbjct: 31450126 ctgctactacaacaactacaacctcacccagccgcgccacttctgcaagacgtgccgccg 31450067 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgc 115 ||||||||| |||||||||||||| |||||||| | |||||||||| |||| Sbjct: 31450066 gtactggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggtgccgc 31450012 Score = 48.1 bits (24), Expect = 0.024 Identities = 87/108 (80%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||| ||||| |||||||||||| | ||||| | Sbjct: 21400759 ctgctactacaacaactacagcctcagccagccgcgccacttctgcaagacgtgccggag 21400818 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 21400819 gtactggaccaagggcggcgcgctccgcaacgtcccagtcggcggcgg 21400866 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgccg 434 ||||||||||||||||||||| Sbjct: 1651088 gcggcggcggtggtggcgccg 1651068 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||||||| ||||| Sbjct: 7579480 ggcggcggcggcgggggcgccggc 7579457
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence Length = 134014 Score = 137 bits (69), Expect = 3e-29 Identities = 105/117 (89%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 23611 ctgctactacaacaactactccctctcccagccccgccacttctgcaagacctgccgccg 23670 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccg 117 ||||||||| ||||||||| ||||||| |||||||| || |||||||||| |||||| Sbjct: 23671 ctactggacgcgcggcggctcgctccgcaacgtccccgtcggcggcgggtgccgccg 23727
>ref|XM_470142.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1068 Score = 131 bits (66), Expect = 2e-27 Identities = 105/118 (88%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||| ||||||||||| |||||||||||| | |||||||| Sbjct: 213 ctgctacttcaacaactactcgctctcgcagccgcgccacttctgcaagacgtgccgccg 272 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||||| |||||||| |||||||| |||||||| || |||||||||| ||||||| Sbjct: 273 ctactggacgcgcggcggagcgctccgcaacgtccccgtcggcggcgggtgccgccgc 330
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 131 bits (66), Expect = 2e-27 Identities = 115/130 (88%), Gaps = 1/130 (0%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||| || |||||||| |||||||||||| || |||||||| Sbjct: 23493285 ctgctacttcaacaactactcgctgtcgcagccgcgccacttctgcaaggcttgccgccg 23493344 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgcca 120 ||||||||| |||||||||||| |||| |||||||| || |||||||||| ||||||| | Sbjct: 23493345 ctactggacgcgcggcggcgcg-tccgcaacgtccccgtcggcggcgggtgccgccgcaa 23493403 Query: 121 cgccaagcgc 130 | |||||||| Sbjct: 23493404 caccaagcgc 23493413 Score = 83.8 bits (42), Expect = 4e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 27 cgcagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgctcc 86 ||||||| || |||||||||||||||||||||||||||||||| | ||||||| | |||| Sbjct: 24758000 cgcagccgcggcacttctgccgcgcctgccgccgctactggacgctcggcggctccctcc 24757941 Query: 87 ggaacgtccc 96 | |||||||| Sbjct: 24757940 gcaacgtccc 24757931 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 aggcggcggcggcgggggcaccggc 168 ||||||||||||||| ||||||||| Sbjct: 26697808 aggcggcggcggcggcggcaccggc 26697832 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcac 164 |||||||||||||||||||| Sbjct: 22650637 ggcggcggcggcgggggcac 22650618
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 131 bits (66), Expect = 2e-27 Identities = 105/118 (88%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||| ||||||||||| |||||||||||| | |||||||| Sbjct: 115673 ctgctacttcaacaactactcgctctcgcagccgcgccacttctgcaagacgtgccgccg 115732 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||||| |||||||| |||||||| |||||||| || |||||||||| ||||||| Sbjct: 115733 ctactggacgcgcggcggagcgctccgcaacgtccccgtcggcggcgggtgccgccgc 115790
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 131 bits (66), Expect = 2e-27 Identities = 115/130 (88%), Gaps = 1/130 (0%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||| || |||||||| |||||||||||| || |||||||| Sbjct: 23421476 ctgctacttcaacaactactcgctgtcgcagccgcgccacttctgcaaggcttgccgccg 23421535 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgcca 120 ||||||||| |||||||||||| |||| |||||||| || |||||||||| ||||||| | Sbjct: 23421536 ctactggacgcgcggcggcgcg-tccgcaacgtccccgtcggcggcgggtgccgccgcaa 23421594 Query: 121 cgccaagcgc 130 | |||||||| Sbjct: 23421595 caccaagcgc 23421604 Score = 83.8 bits (42), Expect = 4e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 27 cgcagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgctcc 86 ||||||| || |||||||||||||||||||||||||||||||| | ||||||| | |||| Sbjct: 24686206 cgcagccgcggcacttctgccgcgcctgccgccgctactggacgctcggcggctccctcc 24686147 Query: 87 ggaacgtccc 96 | |||||||| Sbjct: 24686146 gcaacgtccc 24686137 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 aggcggcggcggcgggggcaccggc 168 ||||||||||||||| ||||||||| Sbjct: 26625977 aggcggcggcggcggcggcaccggc 26626001 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcac 164 |||||||||||||||||||| Sbjct: 22578828 ggcggcggcggcgggggcac 22578809
>emb|AL845346.4|CNS08CB8 Oryza sativa chromosome 12, . BAC OSJNBa0018E22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 69273 Score = 131 bits (66), Expect = 2e-27 Identities = 115/130 (88%), Gaps = 1/130 (0%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||| || |||||||| |||||||||||| || |||||||| Sbjct: 13833 ctgctacttcaacaactactcgctgtcgcagccgcgccacttctgcaaggcttgccgccg 13892 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgcca 120 ||||||||| |||||||||||| |||| |||||||| || |||||||||| ||||||| | Sbjct: 13893 ctactggacgcgcggcggcgcg-tccgcaacgtccccgtcggcggcgggtgccgccgcaa 13951 Query: 121 cgccaagcgc 130 | |||||||| Sbjct: 13952 caccaagcgc 13961
>emb|AJ312327.1|HVU312327 Hordeum vulgare dof155 gene for dof zinc finger protein Length = 986 Score = 115 bits (58), Expect = 1e-22 Identities = 103/118 (87%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 201 ctgctactacaacaactactccctctcgcagccccgccacttctgcaaggcatgccgccg 260 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgc 118 ||||||||| ||||| ||||| |||||| ||| || || || ||||||| ||||||| Sbjct: 261 ctactggacgcgcgggggcgccctccggtccgttccggtgggaggcgggtgccgccgc 318
>ref|NM_189690.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 103 bits (52), Expect = 5e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| ||| ||||||| |||||||||||| || |||||||| Sbjct: 126 ctgctactacaacaactacaacctggcgcagccgcgccacttctgcaaggcgtgccgccg 185 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| ||||||||||||||||| |||||||| || |||||||| Sbjct: 186 ctactggacgcgcggcggcgcgctccgcaacgtccccgtcggcggcgg 233
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 103 bits (52), Expect = 5e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| ||| ||||||| |||||||||||| || |||||||| Sbjct: 5013734 ctgctactacaacaactacaacctggcgcagccgcgccacttctgcaaggcgtgccgccg 5013793 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| ||||||||||||||||| |||||||| || |||||||| Sbjct: 5013794 ctactggacgcgcggcggcgcgctccgcaacgtccccgtcggcggcgg 5013841 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||| | | |||||| |||||| |||||||| |||||||||| Sbjct: 27670046 ctgctacttcaacaactacaacgtgcggcagccgcgccacctctgccgctcctgccgccg 27670105 Query: 61 ctactggacccgcggcggcgcgctccg 87 ||||||||| ||||||||||||||| Sbjct: 27670106 ctactggacggccggcggcgcgctccg 27670132 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||| | || ||||| |||||||||||| ||||||| ||| Sbjct: 31844405 ctgctacttcaacaactacaacgtcaaccagccgcgccacttctgcaaggcctgccaccg 31844346 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccc 96 ||||||||| ||||||||||||||| |||||||| Sbjct: 31844345 ctactggacggccggcggcgcgctccgcaacgtccc 31844310 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgccg 434 ||||||||||||||||||||| Sbjct: 37988128 gcggcggcggtggtggcgccg 37988108 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcaccggc 168 ||||||||||||||||||| |||| Sbjct: 40029894 ggcggcggcggcgggggcaacggc 40029871 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||| ||||||||| Sbjct: 39517090 ggcggcggcggcggcggcaccggc 39517067 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||| ||||||||| Sbjct: 31109036 ggcggcggcggcggcggcaccggc 31109013 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 aacggcggcggcggcaacct 291 |||||||||||||||||||| Sbjct: 30323381 aacggcggcggcggcaacct 30323400 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 gcggcggcggtggtggcgcc 433 |||||||||||||||||||| Sbjct: 9074000 gcggcggcggtggtggcgcc 9074019 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 274 cggcggcggcggcaacctgtccggcctc 301 |||||||||||||||||| | ||||||| Sbjct: 3660153 cggcggcggcggcaacctcttcggcctc 3660180 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctgccgcgcctgccgccgct 62 |||||||||||||||||||| Sbjct: 3120532 ctgccgcgcctgccgccgct 3120513
>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0001B06 Length = 140304 Score = 103 bits (52), Expect = 5e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| ||| ||||||| |||||||||||| || |||||||| Sbjct: 7172 ctgctactacaacaactacaacctggcgcagccgcgccacttctgcaaggcgtgccgccg 7231 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| ||||||||||||||||| |||||||| || |||||||| Sbjct: 7232 ctactggacgcgcggcggcgcgctccgcaacgtccccgtcggcggcgg 7279
>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671B11 Length = 168372 Score = 103 bits (52), Expect = 5e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| ||| ||||||| |||||||||||| || |||||||| Sbjct: 114187 ctgctactacaacaactacaacctggcgcagccgcgccacttctgcaaggcgtgccgccg 114246 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| ||||||||||||||||| |||||||| || |||||||| Sbjct: 114247 ctactggacgcgcggcggcgcgctccgcaacgtccccgtcggcggcgg 114294
>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete sequence Length = 154558 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | |||||||| |||||||||||||||||||||||||| Sbjct: 119617 ctgctactacaacaactacaacacgtcgcagccgcgccacttctgccgcgcctgccgccg 119558 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccc 96 ||||||||| | ||||||| | ||||| |||||||| Sbjct: 119557 ctactggacgctcggcggctccctccgcaacgtccc 119522
>dbj|AK119803.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-F03, full insert sequence Length = 965 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | |||||||| |||||||||||||||||||||||||| Sbjct: 237 ctgctactacaacaactacaacacgtcgcagccgcgccacttctgccgcgcctgccgccg 296 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccc 96 ||||||||| | ||||||| | ||||| |||||||| Sbjct: 297 ctactggacgctcggcggctccctccgcaacgtccc 332
>emb|AJ312329.1|HVU312329 Hordeum vulgare partial dof171 gene for dof zinc finger protein Length = 535 Score = 91.7 bits (46), Expect = 2e-15 Identities = 109/130 (83%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||||||||| | |||||||| |||||||||| | | ||| |||| Sbjct: 148 ctgctacttcaacaactactccctcacccagccccgtcacttctgccacacatgcggccg 207 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgccgcca 120 || ||||| || |||||||||||||| | |||| || ||| || ||||| || |||| Sbjct: 208 ctcttggactcgtggcggcgcgctccgcagtgtccgcgtgggcagcaggtacagctgcca 267 Query: 121 cgccaagcgc 130 |||||||||| Sbjct: 268 cgccaagcgc 277
>gb|AF542507.1| Oryza sativa Dof-like protein 34 mRNA, partial cds Length = 1134 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||||||||||| ||| |||||||| | |||||||| Sbjct: 168 ctgctactacaacaactacagcctctcgcagccgcgctacttctgcaagacgtgccgccg 227 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||| |||||| |||||||||||||||| || |||||||| Sbjct: 228 ctactggaccaagggcggctcgctccggaacgtccccgtcggcggcgg 275
>gb|AY461803.1| Oryza sativa (japonica cultivar-group) Dof28 mRNA, complete cds Length = 879 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | |||||||| |||||||||||||||||||||||||| Sbjct: 210 ctgctactacaacaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccg 269 Query: 61 ctactggacccgcggcggcgcgctccg 87 ||||||||| | ||| ||| ||||||| Sbjct: 270 ctactggacgcacgggggcacgctccg 296
>ref|XM_474359.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 621 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | |||||||| |||||||||||||||||||||||||| Sbjct: 183 ctgctactacaacaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccg 242 Query: 61 ctactggacccgcggcggcgcgctccg 87 ||||||||| | ||| ||| ||||||| Sbjct: 243 ctactggacgcacgggggcacgctccg 269
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence Length = 150206 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | |||||||| |||||||||||||||||||||||||| Sbjct: 145346 ctgctactacaacaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccg 145287 Query: 61 ctactggacccgcggcggcgcgctccg 87 ||||||||| | ||| ||| ||||||| Sbjct: 145286 ctactggacgcacgggggcacgctccg 145260
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | |||||||| |||||||||||||||||||||||||| Sbjct: 34691225 ctgctactacaacaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccg 34691166 Query: 61 ctactggacccgcggcggcgcgctccg 87 ||||||||| | ||| ||| ||||||| Sbjct: 34691165 ctactggacgcacgggggcacgctccg 34691139 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 aggcggcggcggcgggggca 163 |||||||||||||||||||| Sbjct: 25348097 aggcggcggcggcgggggca 25348078 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 gcggcggcggtggtggcgcc 433 |||||||||||||||||||| Sbjct: 16852793 gcggcggcggtggtggcgcc 16852812
>dbj|AK107524.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-F12, full insert sequence Length = 1096 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | |||||||| |||||||||||||||||||||||||| Sbjct: 320 ctgctactacaacaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccg 379 Query: 61 ctactggacccgcggcggcgcgctccg 87 ||||||||| | ||| ||| ||||||| Sbjct: 380 ctactggacgcacgggggcacgctccg 406
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete sequence Length = 100836 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | |||||||| |||||||||||||||||||||||||| Sbjct: 89453 ctgctactacaacaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccg 89394 Query: 61 ctactggacccgcggcggcgcgctccg 87 ||||||||| | ||| ||| ||||||| Sbjct: 89393 ctactggacgcacgggggcacgctccg 89367
>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete sequence Length = 103264 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | |||||||| |||||||||||||||||||||||||| Sbjct: 34549 ctgctactacaacaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccg 34490 Query: 61 ctactggacccgcggcggcgcgctccg 87 ||||||||| | ||| ||| ||||||| Sbjct: 34489 ctactggacgcacgggggcacgctccg 34463
>ref|XM_478332.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1080 Score = 83.8 bits (42), Expect = 4e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||||| || |||||||| || ||||||||| || ||| || Sbjct: 183 ctgctactacaacaactactcgctgtcgcagccgcggcacttctgcaaggcgtgcaagcg 242 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggt 110 ||||||||| ||||||||| |||| ||||||||||| || |||||||||| Sbjct: 243 ctactggacgcgcggcggcacgctgcggaacgtccccgtcggcggcgggt 292
>dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1163_G04 Length = 106253 Score = 83.8 bits (42), Expect = 4e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||||| || |||||||| || ||||||||| || ||| || Sbjct: 85434 ctgctactacaacaactactcgctgtcgcagccgcggcacttctgcaaggcgtgcaagcg 85493 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggt 110 ||||||||| ||||||||| |||| ||||||||||| || |||||||||| Sbjct: 85494 ctactggacgcgcggcggcacgctgcggaacgtccccgtcggcggcgggt 85543
>emb|AL954829.6|CNS08CD5 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140383 Score = 83.8 bits (42), Expect = 4e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 27 cgcagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgctcc 86 ||||||| || |||||||||||||||||||||||||||||||| | ||||||| | |||| Sbjct: 65157 cgcagccgcggcacttctgccgcgcctgccgccgctactggacgctcggcggctccctcc 65098 Query: 87 ggaacgtccc 96 | |||||||| Sbjct: 65097 gcaacgtccc 65088
>ref|XM_467389.1| Oryza sativa (japonica cultivar-group), mRNA Length = 900 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| ||| |||||| |||||||||||| ||| |||||||| | |||||||| Sbjct: 192 ctgctactacaataactacagcctctcgcagccgcgctacttctgcaagacgtgccgccg 251 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||| |||||| |||||||||||||||| || |||||||| Sbjct: 252 ctactggaccaagggcggctcgctccggaacgtccccgtcggcggcgg 299
>ref|XM_464857.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1537 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | | ||||||| ||| |||||||||||| |||||||| Sbjct: 267 ctgctactacaacaactacagcatggcgcagccgcgctacttctgccgcgagtgccgccg 326 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||||| |||||| | ||||| |||||||| || |||||||| Sbjct: 327 ctactggacccagggcggctccctccgcaacgtccccgtcggcggcgg 374
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| ||| |||||| |||||||||||| ||| |||||||| | |||||||| Sbjct: 105036 ctgctactacaataactacagcctctcgcagccgcgctacttctgcaagacgtgccgccg 105095 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||| |||||| |||||||||||||||| || |||||||| Sbjct: 105096 ctactggaccaagggcggctcgctccggaacgtccccgtcggcggcgg 105143
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||||| |||||||||||||||||| || |||||||| Sbjct: 10112382 ctgctactacaacaactacaacctctcccagccccgccacttctgcaaggcgtgccgccg 10112441 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||| |||||| ||||| |||||||| || |||||||| Sbjct: 10112442 ctactggaccaagggcggcctcctccgcaacgtccccgtcggcggcgg 10112489 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 caagcaggcggcggcggcgg 158 |||||||||||||||||||| Sbjct: 12418006 caagcaggcggcggcggcgg 12417987
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| ||| |||||| |||||||||||| ||| |||||||| | |||||||| Sbjct: 29257595 ctgctactacaataactacagcctctcgcagccgcgctacttctgcaagacgtgccgccg 29257536 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||| |||||| |||||||||||||||| || |||||||| Sbjct: 29257535 ctactggaccaagggcggctcgctccggaacgtccccgtcggcggcgg 29257488 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | | ||||||| ||| |||||||||||| |||||||| Sbjct: 8590687 ctgctactacaacaactacagcatggcgcagccgcgctacttctgccgcgagtgccgccg 8590628 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||||| |||||| | ||||| |||||||| || |||||||| Sbjct: 8590627 ctactggacccagggcggctccctccgcaacgtccccgtcggcggcgg 8590580 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||||||||||| |||||||||||| ||||||||| Sbjct: 30226425 ctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccg 30226366 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| ||||||| ||||| |||||||| || |||||||| Sbjct: 30226365 gtactggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 30226318 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||| |||||| ||| |||||||| | |||||||| Sbjct: 27455584 ctgctactacaacaactacagcctccagcagccgcgctacttctgcaagacgtgccgccg 27455525 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| |||||| ||||||| |||||||| || |||||||| Sbjct: 27455524 ctactggacggagggcggctcgctccgcaacgtccccgtcggcggcgg 27455477
>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0009N02 Length = 121142 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | | ||||||| ||| |||||||||||| |||||||| Sbjct: 60010 ctgctactacaacaactacagcatggcgcagccgcgctacttctgccgcgagtgccgccg 59951 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||||| |||||| | ||||| |||||||| || |||||||| Sbjct: 59950 ctactggacccagggcggctccctccgcaacgtccccgtcggcggcgg 59903
>dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0491D10 Length = 162039 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||||| |||||||||||||||||| || |||||||| Sbjct: 78748 ctgctactacaacaactacaacctctcccagccccgccacttctgcaaggcgtgccgccg 78807 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||| |||||| ||||| |||||||| || |||||||| Sbjct: 78808 ctactggaccaagggcggcctcctccgcaacgtccccgtcggcggcgg 78855
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| ||| |||||| |||||||||||| ||| |||||||| | |||||||| Sbjct: 54940 ctgctactacaataactacagcctctcgcagccgcgctacttctgcaagacgtgccgccg 54881 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||| |||||| |||||||||||||||| || |||||||| Sbjct: 54880 ctactggaccaagggcggctcgctccggaacgtccccgtcggcggcgg 54833
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| ||| |||||| |||||||||||| ||| |||||||| | |||||||| Sbjct: 147563 ctgctactacaataactacagcctctcgcagccgcgctacttctgcaagacgtgccgccg 147504 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||| |||||| |||||||||||||||| || |||||||| Sbjct: 147503 ctactggaccaagggcggctcgctccggaacgtccccgtcggcggcgg 147456
>dbj|AK107294.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-C02, full insert sequence Length = 1537 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | | ||||||| ||| |||||||||||| |||||||| Sbjct: 267 ctgctactacaacaactacagcatggcgcagccgcgctacttctgccgcgagtgccgccg 326 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||||| |||||| | ||||| |||||||| || |||||||| Sbjct: 327 ctactggacccagggcggctccctccgcaacgtccccgtcggcggcgg 374
>dbj|AB028131.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1572 Score = 79.8 bits (40), Expect = 7e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | | ||||||| ||| |||||||||||| |||||||| Sbjct: 296 ctgctactacaacaactacagcatggcgcagccgcgctacttctgccgcgagtgccgccg 355 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||||| |||||| | ||||| |||||||| || |||||||| Sbjct: 356 ctactggacccagggcggctccctccgcaacgtccccgtcggcggcgg 403
>ref|NM_191985.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 528 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||| | | |||||| |||||| |||||||| |||||||||| Sbjct: 288 ctgctacttcaacaactacaacgtgcggcagccgcgccacctctgccgctcctgccgccg 347 Query: 61 ctactggacccgcggcggcgcgctccg 87 ||||||||| ||||||||||||||| Sbjct: 348 ctactggacggccggcggcgcgctccg 374
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||| | | |||||| |||||| |||||||| |||||||||| Sbjct: 78612 ctgctacttcaacaactacaacgtgcggcagccgcgccacctctgccgctcctgccgccg 78671 Query: 61 ctactggacccgcggcggcgcgctccg 87 ||||||||| ||||||||||||||| Sbjct: 78672 ctactggacggccggcggcgcgctccg 78698
>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0007F06 Length = 150817 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||| | | |||||| |||||| |||||||| |||||||||| Sbjct: 137340 ctgctacttcaacaactacaacgtgcggcagccgcgccacctctgccgctcctgccgccg 137399 Query: 61 ctactggacccgcggcggcgcgctccg 87 ||||||||| ||||||||||||||| Sbjct: 137400 ctactggacggccggcggcgcgctccg 137426
>ref|XM_507527.1| PREDICTED Oryza sativa (japonica cultivar-group), B1121A12.10 mRNA Length = 1328 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||||||||||| |||||||||||| ||||||||| Sbjct: 369 ctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccg 428 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| ||||||| ||||| |||||||| || |||||||| Sbjct: 429 gtactggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 476
>ref|XM_467571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1277 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||||||||||| |||||||||||| ||||||||| Sbjct: 315 ctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccg 374 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| ||||||| ||||| |||||||| || |||||||| Sbjct: 375 gtactggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 422
>ref|XM_506950.2| PREDICTED Oryza sativa (japonica cultivar-group), B1121A12.10 mRNA Length = 1343 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||||||||||| |||||||||||| ||||||||| Sbjct: 375 ctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccg 434 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| ||||||| ||||| |||||||| || |||||||| Sbjct: 435 gtactggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 482
>ref|NM_191305.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 618 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||| | || ||||| |||||||||||| ||||||| ||| Sbjct: 345 ctgctacttcaacaactacaacgtcaaccagccgcgccacttctgcaaggcctgccaccg 404 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccc 96 ||||||||| ||||||||||||||| |||||||| Sbjct: 405 ctactggacggccggcggcgcgctccgcaacgtccc 440
>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131G08 Length = 158241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||| | || ||||| |||||||||||| ||||||| ||| Sbjct: 30483 ctgctacttcaacaactacaacgtcaaccagccgcgccacttctgcaaggcctgccaccg 30424 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccc 96 ||||||||| ||||||||||||||| |||||||| Sbjct: 30423 ctactggacggccggcggcgcgctccgcaacgtccc 30388
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1121A12 Length = 138796 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||||||||||| |||||||||||| ||||||||| Sbjct: 27342 ctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccg 27283 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| ||||||| ||||| |||||||| || |||||||| Sbjct: 27282 gtactggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 27235
>dbj|AK100892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130J11, full insert sequence Length = 1328 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||||||||||| |||||||||||| ||||||||| Sbjct: 369 ctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccg 428 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| ||||||| ||||| |||||||| || |||||||| Sbjct: 429 gtactggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 476
>dbj|AK101321.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034E07, full insert sequence Length = 1343 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||||||||||| |||||||||||| ||||||||| Sbjct: 375 ctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccg 434 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| ||||||| ||||| |||||||| || |||||||| Sbjct: 435 gtactggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 482
>dbj|AK071083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023076F14, full insert sequence Length = 1078 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||| | || ||||| |||||||||||| ||||||| ||| Sbjct: 472 ctgctacttcaacaactacaacgtcaaccagccgcgccacttctgcaaggcctgccaccg 531 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccc 96 ||||||||| ||||||||||||||| |||||||| Sbjct: 532 ctactggacggccggcggcgcgctccgcaacgtccc 567
>dbj|AK061000.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F09, full insert sequence Length = 1277 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||||||||||| |||||||||||| ||||||||| Sbjct: 315 ctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccg 374 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| ||||||| ||||| |||||||| || |||||||| Sbjct: 375 gtactggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 422
>dbj|AB028132.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1331 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||||||||||| |||||||||||| ||||||||| Sbjct: 358 ctgctactacaacaactacaacctctcgcagccgcgccacttctgcaagagctgccgccg 417 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| ||||||| ||||| |||||||| || |||||||| Sbjct: 418 gtactggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 465
>ref|XM_469889.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1415 Score = 69.9 bits (35), Expect = 7e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||| | ||||| |||||||||||| | |||||||| Sbjct: 243 ctgctactacaacaactacaacctcacccagccgcgccacttctgcaagacgtgccgccg 302 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgc 115 ||||||||| |||||||||||||| |||||||| | |||||||||| |||| Sbjct: 303 gtactggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggtgccgc 357
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 69.9 bits (35), Expect = 7e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||| | ||||| |||||||||||| | |||||||| Sbjct: 136190 ctgctactacaacaactacaacctcacccagccgcgccacttctgcaagacgtgccgccg 136249 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgc 115 ||||||||| |||||||||||||| |||||||| | |||||||||| |||| Sbjct: 136250 gtactggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggtgccgc 136304
>dbj|AK063380.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-F11, full insert sequence Length = 1626 Score = 69.9 bits (35), Expect = 7e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||| | ||||| |||||||||||| | |||||||| Sbjct: 425 ctgctactacaacaactacaacctcacccagccgcgccacttctgcaagacgtgccgccg 484 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtaccgc 115 ||||||||| |||||||||||||| |||||||| | |||||||||| |||| Sbjct: 485 gtactggaccaagggcggcgcgctccgcaacgtccccatcggcggcgggtgccgc 539
>gb|DQ490965.1| Mutant Zea mays clone pGR25C22 disrupted DOF1 (Dof1) gene, promoter region and complete cds Length = 12502 Score = 63.9 bits (32), Expect = 4e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | ||| ||||| |||||||||||| | ||||||||| Sbjct: 9125 ctgctactacaacaactacaacacctcccagccgcgccacttctgcaagggctgccgccg 9184 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||| |||||| |||| || |||||||| || |||||||| Sbjct: 9185 ctactggaccaagggcggcacgctgcgcaacgtccccgtcggcggcgg 9232
>emb|AJ312331.1|HVU312331 Hordeum vulgare partial dof172 gene for dof zinc finger protein, exon 1 Length = 534 Score = 63.9 bits (32), Expect = 4e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| ||| |||||||| |||||||||||| | ||||| || Sbjct: 126 ctgctactacaacaactacagcctgtcgcagccgcgccacttctgcaagacatgccggcg 185 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| |||||||||||||| | |||||| || |||||||| Sbjct: 186 gtactggaccaagggcggcgcgctccgcagcgtccccgtcggcggcgg 233
>gb|AY955493.2| Triticum aestivum Dof1 mRNA, complete cds Length = 1000 Score = 63.9 bits (32), Expect = 4e-07 Identities = 89/108 (82%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| ||| |||||||| |||||||||||| ||||||||| Sbjct: 281 ctgctactacaacaactacaacctgtcgcagccgcgccacttctgcaagagctgccgccg 340 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| ||||||| ||||| |||||||| || |||||||| Sbjct: 341 gtactggaccaagggcggcgtcctccgcaacgtccccgtcggcggcgg 388
>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01, complete sequence Length = 160142 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 53 tgccgccgctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgggtac 112 |||||||||||||||||| |||||| ||||||||||||| || || |||||||||| | Sbjct: 3692 tgccgccgctactggaccaagggcggctcgctccggaacgtgcccgtcggcggcgggtgc 3751 Query: 113 cgc 115 ||| Sbjct: 3752 cgc 3754
>ref|NM_179795.1| Arabidopsis thaliana DNA binding / transcription factor AT2G28810 mRNA, complete cds Length = 1371 Score = 60.0 bits (30), Expect = 6e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 5 tacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgctac 64 ||||||||||||||| |||| ||||||| |||||||||||| || ||||| |||||| Sbjct: 373 tacttcaacaactacaacctcacgcagccacgccacttctgcaaagcttgccgtcgctac 432 Query: 65 tggacccgcggcgg 78 ||||| || ||||| Sbjct: 433 tggacacgtggcgg 446
>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete sequence Length = 107097 Score = 60.0 bits (30), Expect = 6e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 5 tacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgctac 64 ||||||||||||||| |||| ||||||| |||||||||||| || ||||| |||||| Sbjct: 35563 tacttcaacaactacaacctcacgcagccacgccacttctgcaaagcttgccgtcgctac 35622 Query: 65 tggacccgcggcgg 78 ||||| || ||||| Sbjct: 35623 tggacacgtggcgg 35636
>emb|BX819308.1|CNS0A8SY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB67ZB08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1287 Score = 60.0 bits (30), Expect = 6e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 5 tacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgctac 64 ||||||||||||||| |||| ||||||| |||||||||||| || ||||| |||||| Sbjct: 370 tacttcaacaactacaacctcacgcagccacgccacttctgcaaagcttgccgtcgctac 429 Query: 65 tggacccgcggcgg 78 ||||| || ||||| Sbjct: 430 tggacacgtggcgg 443
>emb|BX818903.1|CNS0A8YZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB25ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1436 Score = 60.0 bits (30), Expect = 6e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 5 tacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgctac 64 ||||||||||||||| |||| ||||||| |||||||||||| || ||||| |||||| Sbjct: 367 tacttcaacaactacaacctcacgcagccacgccacttctgcaaagcttgccgtcgctac 426 Query: 65 tggacccgcggcgg 78 ||||| || ||||| Sbjct: 427 tggacacgtggcgg 440
>emb|BX818852.1|CNS0A91K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1257 Score = 60.0 bits (30), Expect = 6e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 5 tacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccgctac 64 ||||||||||||||| |||| ||||||| |||||||||||| || ||||| |||||| Sbjct: 359 tacttcaacaactacaacctcacgcagccacgccacttctgcaaagcttgccgtcgctac 418 Query: 65 tggacccgcggcgg 78 ||||| || ||||| Sbjct: 419 tggacacgtggcgg 432
>emb|AJ312328.1|HVU312328 Hordeum vulgare partial dof151 gene for dof zinc finger protein Length = 657 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||| | || ||||| || ||||||||||| ||||||| ||| Sbjct: 252 ctgctacttcaacaactacaacgtcaaccagccgcggcacttctgccgagcctgccaccg 311 Query: 61 ctactggac 69 ||||||||| Sbjct: 312 ctactggac 320
>emb|AJ012284.1|TAE012284 Triticum aestivum mRNA for DNA binding protein PBF, partial Length = 993 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 29 cagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgctccgg 88 ||||||||| |||||||| |||||||||||||||||||||| || ||| | ||||| Sbjct: 172 cagccccgctacttctgcaaggcctgccgccgctactggacccatggtggctccctccgc 231 Query: 89 aacgtccc 96 |||||||| Sbjct: 232 aacgtccc 239
>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0657H12 Length = 142688 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Minus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||| |||||| ||| |||||||| | |||||||| Sbjct: 47306 ctgctactacaacaactacagcctccagcagccgcgctacttctgcaagacgtgccgccg 47247 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| |||||| ||||||| |||||||| || |||||||| Sbjct: 47246 ctactggacggagggcggctcgctccgcaacgtccccgtcggcggcgg 47199
>dbj|AK120810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014F11, full insert sequence Length = 1744 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||| |||||| ||| |||||||| | |||||||| Sbjct: 372 ctgctactacaacaactacagcctccagcagccgcgctacttctgcaagacgtgccgccg 431 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| |||||| ||||||| |||||||| || |||||||| Sbjct: 432 ctactggacggagggcggctcgctccgcaacgtccccgtcggcggcgg 479
>emb|AJ312297.1|HVU312297 Hordeum vulgare sed gene for dof zinc finger protein, exons 1-2 Length = 4727 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||| |||||| ||| |||||||| | |||||||| Sbjct: 3694 ctgctactacaacaactacagcctccagcagccgcgctacttctgcaagacgtgccgccg 3753 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||| |||||| ||||||| ||||| || || |||||||| Sbjct: 3754 ctactggaccgagggcggctcgctccgcaacgtgcccgtcggcggcgg 3801
>emb|X66076.1|ZMMNB1A Z.mays MNB1a mRNA for DNA-binding protein Length = 1225 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | ||| ||||| |||||||||||| | ||||||||| Sbjct: 263 ctgctactacaacaactacaacacctcccagccgcgccacttctgcaagggctgccgccg 322 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||| || ||| |||| || |||||||| || |||||||| Sbjct: 323 ctactggaccaagggtggcacgctgcgcaacgtccccgtcggcggcgg 370
>emb|AJ276357.1|HVU276357 Hordeum vulgare mRNA for dof zinc finger protein (sed gene) Length = 1555 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||| |||||| ||| |||||||| | |||||||| Sbjct: 489 ctgctactacaacaactacagcctccagcagccgcgctacttctgcaagacgtgccgccg 548 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||| |||||| ||||||| ||||| || || |||||||| Sbjct: 549 ctactggaccgagggcggctcgctccgcaacgtgcccgtcggcggcgg 596
>emb|AJ000991.1|HVBPBF Hordeum vulgare mRNA for DNA binding protein BPBF Length = 1318 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| | | || ||||| ||| |||||||| ||||||||||| Sbjct: 174 ctgctactacaacaactacagcatgtcccagccgcgctacttctgcaaggcctgccgccg 233 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccc 96 ||||||||||| || ||| | ||||| |||||||| Sbjct: 234 ctactggacccatggtggctccctccgcaacgtccc 269
>gb|AY496057.2| Triticum aestivum Dof DNA-binding protein mRNA, complete cds Length = 1279 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 29 cagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgctccgg 88 ||||||||| |||||||| |||||||||||||||||||||| || ||| | ||||| Sbjct: 215 cagccccgctacttctgcaaggcctgccgccgctactggacccatggtggctccctccgc 274 Query: 89 aacgtccc 96 |||||||| Sbjct: 275 aacgtccc 282
>dbj|AB028133.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1174 Score = 56.0 bits (28), Expect = 1e-04 Identities = 80/96 (83%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||| | || ||||| |||||||||||| ||||||| ||| Sbjct: 550 ctgctacttcaacaactacaacgtcaaccagccgcgccacttctgcaaggcctgccaccg 609 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccc 96 ||||||||| |||||||||| |||| |||||||| Sbjct: 610 ctactggacggccggcggcgcg-tccgcaacgtccc 644
>dbj|AB028130.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1550 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||| |||||| ||| |||||||| | |||||||| Sbjct: 500 ctgctactacaacaactacagcctccagcagccgcgctacttctgcaagacgtgccgccg 559 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| |||||| ||||||| |||||||| || |||||||| Sbjct: 560 ctactggacggagggcggctcgctccgcaacgtccccgtcggcggcgg 607
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 27 cgcagccccgccacttctgccgcgcctgccgccgctactggac 69 ||||||| || || ||||||||||| ||||||||||||||||| Sbjct: 65935 cgcagccgcggcatttctgccgcgcgtgccgccgctactggac 65893
>ref|NM_129315.2| Arabidopsis thaliana DNA binding / transcription factor AT2G37590 mRNA, complete cds Length = 1263 Score = 50.1 bits (25), Expect = 0.006 Identities = 85/105 (80%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||| |||| | || || |||||||||||| ||||||| | Sbjct: 451 ctgctacttcaacaactacagcctcactcaaccacgccacttctgcaagacctgccggag 510 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcgg 105 |||||||| || ||||| || ||||| |||||||| || ||||| Sbjct: 511 atactggacacgtggcggagctctccgcaacgtcccagtcggcgg 555
>gb|AC004684.3| Arabidopsis thaliana chromosome 2 clone F13M22 map ve018, complete sequence Length = 93845 Score = 50.1 bits (25), Expect = 0.006 Identities = 85/105 (80%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||| |||| | || || |||||||||||| ||||||| | Sbjct: 25873 ctgctacttcaacaactacagcctcactcaaccacgccacttctgcaagacctgccggag 25932 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcgg 105 |||||||| || ||||| || ||||| |||||||| || ||||| Sbjct: 25933 atactggacacgtggcggagctctccgcaacgtcccagtcggcgg 25977
>emb|BX820837.1|CNS0A8PT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZC06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1314 Score = 50.1 bits (25), Expect = 0.006 Identities = 85/105 (80%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 ||||||||||||||||||| |||| | || || |||||||||||| ||||||| | Sbjct: 452 ctgctacttcaacaactacagcctcactcaaccacgccacttctgcaagacctgccggag 511 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcgg 105 |||||||| || ||||| || ||||| |||||||| || ||||| Sbjct: 512 atactggacacgtggcggagctctccgcaacgtcccagtcggcgg 556
>ref|XM_483086.1| Oryza sativa (japonica cultivar-group), mRNA Length = 831 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Plus Query: 53 tgccgccgctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||||||||||| || ||| ||||||| |||||||| || |||||||| Sbjct: 271 tgccgccgctactggaccaagggtggcacgctccgcaacgtccccgtcggcggcgg 326
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 48.1 bits (24), Expect = 0.024 Identities = 87/108 (80%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| |||| ||||| |||||||||||| | ||||| | Sbjct: 100641 ctgctactacaacaactacagcctcagccagccgcgccacttctgcaagacgtgccggag 100700 Query: 61 ctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 ||||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 100701 gtactggaccaagggcggcgcgctccgcaacgtcccagtcggcggcgg 100748
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Plus Query: 53 tgccgccgctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||||||||||| |||||| | ||||| |||||||| || |||||||| Sbjct: 18180534 tgccgccgctactggaccaagggcggctccctccgcaacgtccccgtcggcggcgg 18180589 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 gcggcggcggtggtggcgccg 434 ||||||||||||||||||||| Sbjct: 7171299 gcggcggcggtggtggcgccg 7171319 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 aacggcggcggcggcaacct 291 |||||||||||||||||||| Sbjct: 16167555 aacggcggcggcggcaacct 16167574
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Plus Query: 53 tgccgccgctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||||||||||| || ||| ||||||| |||||||| || |||||||| Sbjct: 24225862 tgccgccgctactggaccaagggtggcacgctccgcaacgtccccgtcggcggcgg 24225917 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 198 cgacgacgtcatcgacgacttccgct 223 |||||||||| ||||||||||||||| Sbjct: 27171791 cgacgacgtcctcgacgacttccgct 27171766 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 gcggcggcggtggtggcgcc 433 |||||||||||||||||||| Sbjct: 16114491 gcggcggcggtggtggcgcc 16114510 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 acggcggcggcggcaacctg 292 |||||||||||||||||||| Sbjct: 5050295 acggcggcggcggcaacctg 5050314 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 aacggcggcggcggcaacct 291 |||||||||||||||||||| Sbjct: 3175294 aacggcggcggcggcaacct 3175313
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556A05 Length = 158189 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Plus Query: 53 tgccgccgctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||||||||||| |||||| | ||||| |||||||| || |||||||| Sbjct: 29258 tgccgccgctactggaccaagggcggctccctccgcaacgtccccgtcggcggcgg 29313
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Plus Query: 53 tgccgccgctactggacccgcggcggcgcgctccggaacgtccctgttggcggcgg 108 |||||||||||||||||| || ||| ||||||| |||||||| || |||||||| Sbjct: 92201 tgccgccgctactggaccaagggtggcacgctccgcaacgtccccgtcggcggcgg 92256
>gb|AY111473.1| Zea mays CL830_1 mRNA sequence Length = 1414 Score = 48.1 bits (24), Expect = 0.024 Identities = 75/92 (81%) Strand = Plus / Plus Query: 1 ctgctacttcaacaactactccctctcgcagccccgccacttctgccgcgcctgccgccg 60 |||||||| |||||||||| ||| ||||||| ||| |||||||| | |||||||| Sbjct: 199 ctgctactacaacaactacaacctgacgcagccgcgctacttctgcaagacgtgccgccg 258 Query: 61 ctactggacccgcggcggcgcgctccggaacg 92 ||||||||| | ||||||| | ||||| |||| Sbjct: 259 ctactggacacacggcggcaccctccgcaacg 290
>gb|AC160545.8| Mus musculus chromosome 1, clone RP23-217K18, complete sequence Length = 240081 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 341 agcctcggctccaccttctccag 363 ||||||||||||||||||||||| Sbjct: 173898 agcctcggctccaccttctccag 173920
>gb|AC107846.4| Mus musculus chromosome 1, clone RP23-309I23, complete sequence Length = 178870 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 341 agcctcggctccaccttctccag 363 ||||||||||||||||||||||| Sbjct: 142628 agcctcggctccaccttctccag 142606
>ref|XM_846960.1| PREDICTED: Canis familiaris similar to trans-acting transcription factor 3 isoform 1 (LOC488405), mRNA Length = 3777 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcaccggctgc 171 |||||||||||||||||| |||||||| Sbjct: 252 ggcggcggcggcgggggccccggctgc 226
>ref|XM_483599.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3633 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 198 cgacgacgtcatcgacgacttccgct 223 |||||||||| ||||||||||||||| Sbjct: 231 cgacgacgtcctcgacgacttccgct 256
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 cctgccgccgctgcttcgcctc 322 |||||||||||||||||||||| Sbjct: 863080 cctgccgccgctgcttcgcctc 863059
>gb|AE005959.1| Caulobacter crescentus CB15 section 285 of 359 of the complete genome Length = 10624 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 196 gacgacgacgtcatcgacgact 217 |||||||||||||||||||||| Sbjct: 7183 gacgacgacgtcatcgacgact 7162
>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1521_G02 Length = 117964 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 198 cgacgacgtcatcgacgacttccgct 223 |||||||||| ||||||||||||||| Sbjct: 72824 cgacgacgtcctcgacgacttccgct 72799
>dbj|AK063340.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-A11, full insert sequence Length = 1645 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgccgt 435 |||||||||||||||||||||| Sbjct: 48 gcggcggcggtggtggcgccgt 27
>gb|AY111630.1| Zea mays CL2150_1 mRNA sequence Length = 1313 Score = 44.1 bits (22), Expect = 0.38 Identities = 61/74 (82%) Strand = Plus / Plus Query: 35 cgccacttctgccgcgcctgccgccgctactggacccgcggcggcgcgctccggaacgtc 94 |||||||||||| | ||||||||||||||||||| || ||| |||| || |||||| Sbjct: 297 cgccacttctgcaagggctgccgccgctactggaccaagggtggcacgctgcgcaacgtc 356 Query: 95 cctgttggcggcgg 108 || || |||||||| Sbjct: 357 cccgtcggcggcgg 370
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 32 ccccgccacttctgccgcgcctgccgccgc 61 |||||| |||||||||||||||||| |||| Sbjct: 1469138 ccccgctacttctgccgcgcctgccaccgc 1469109
>gb|U44381.1|HUMANTIMP1 Human tissue inhibitor of metalloproteinases-2 (TIMP-2) gene, exon 1 Length = 2691 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 295 cggcctcctgccgccgctgcttcgcc 320 ||||||||||| |||||||||||||| Sbjct: 2581 cggcctcctgctgccgctgcttcgcc 2606
>gb|AC113538.14| Mus musculus chromosome 8, clone RP23-118F24, complete sequence Length = 206380 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 109971 ggcggcggcggcgggggcacc 109991
>gb|AC102525.8| Mus musculus chromosome 8, clone RP24-133K20, complete sequence Length = 162463 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 153944 ggcggcggcggcgggggcacc 153964
>gb|AY070137.1| Homo sapiens specificity protein 3 (SP3) mRNA, complete cds Length = 3979 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 cggcggcggcgggggcaccggctgc 171 |||||||||||||||| |||||||| Sbjct: 454 cggcggcggcgggggccccggctgc 430
>ref|XM_468595.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 276 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 gcggcggcggtggtggcgccg 434 ||||||||||||||||||||| Sbjct: 29 gcggcggcggtggtggcgccg 49
>ref|XM_463519.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2325 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgccg 434 ||||||||||||||||||||| Sbjct: 92 gcggcggcggtggtggcgccg 72
>ref|NM_024329.4| Homo sapiens EF-hand domain family, member D2 (EFHD2), mRNA Length = 2387 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 129 ggcggcggcggcgggggcacc 149
>ref|XM_515917.1| PREDICTED: Pan troglodytes Sp3 transcription factor (LOC459750), mRNA Length = 2550 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 cggcggcggcgggggcaccggctgc 171 |||||||||||||||| |||||||| Sbjct: 532 cggcggcggcgggggccccggctgc 508
>gb|AC112953.15| Mus musculus chromosome 7, clone RP23-44J21, complete sequence Length = 205513 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 accttctccagcatggggaag 373 ||||||||||||||||||||| Sbjct: 55133 accttctccagcatggggaag 55113
>gb|AY441957.1| Homo sapiens transcription factor SP3 large isoform (SP3) mRNA, complete cds Length = 4286 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 cggcggcggcgggggcaccggctgc 171 |||||||||||||||| |||||||| Sbjct: 805 cggcggcggcgggggccccggctgc 781
>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02, complete sequence Length = 125650 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 aggcggcggcggcgggggcaccggc 168 ||||||||||||||| ||||||||| Sbjct: 97850 aggcggcggcggcggcggcaccggc 97826
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 ccaagcaggcggcggcggcgg 158 ||||||||||||||||||||| Sbjct: 356038 ccaagcaggcggcggcggcgg 356058
>gb|AC164700.3| Mus musculus BAC clone RP24-548M16 from chromosome 5, complete sequence Length = 212172 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 ggcggcggcgggggcaccggc 168 ||||||||||||||||||||| Sbjct: 89166 ggcggcggcgggggcaccggc 89186
>ref|XM_876261.1| PREDICTED: Bos taurus similar to desmoplakin isoform II, transcript variant 3 (LOC514360), mRNA Length = 7583 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 121 ggcggcggcggcgggggcacc 141
>ref|XM_592197.2| PREDICTED: Bos taurus similar to desmoplakin isoform II, transcript variant 1 (LOC514360), mRNA Length = 9380 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 121 ggcggcggcggcgggggcacc 141
>ref|NM_009233.1| Mus musculus SRY-box containing gene 1 (Sox1), mRNA Length = 1176 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 112 ggcggcggcggcgggggcacc 132
>ref|NM_019944.1| Mus musculus homeobox gene HB9 (Hlxb9), mRNA Length = 2018 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 ggcggcggcgggggcaccggc 168 ||||||||||||||||||||| Sbjct: 1138 ggcggcggcgggggcaccggc 1158
>gb|AE009369.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 139 of 187 of the complete sequence Length = 11923 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 cgtcatcgacgacttccgctt 224 ||||||||||||||||||||| Sbjct: 11811 cgtcatcgacgacttccgctt 11831
>gb|AE008244.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 48 of 187 of the complete sequence Length = 13803 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 cgtcatcgacgacttccgctt 224 ||||||||||||||||||||| Sbjct: 7750 cgtcatcgacgacttccgctt 7730
>gb|AC137096.10| Mus musculus chromosome 8, clone RP24-473D4, complete sequence Length = 149463 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 137968 ggcggcggcggcgggggcacc 137948
>gb|AC136022.3| Mus musculus BAC clone RP24-497H18 from chromosome 8, complete sequence Length = 165677 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 412 gcgcggcggcggtggtggcgc 432 ||||||||||||||||||||| Sbjct: 5544 gcgcggcggcggtggtggcgc 5524
>gb|AC147788.1| Latimeria menadoensis clone VMRC4-19C10, complete sequence Length = 168364 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 79505 ggcggcggcggcgggggcacc 79485
>gb|AC129599.3| Mus musculus BAC clone RP23-349A5 from chromosome 8, complete sequence Length = 188426 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 412 gcgcggcggcggtggtggcgc 432 ||||||||||||||||||||| Sbjct: 158501 gcgcggcggcggtggtggcgc 158481
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 gccgccgctgcttcgcctcgc 324 ||||||||||||||||||||| Sbjct: 107391 gccgccgctgcttcgcctcgc 107371
>ref|XM_849203.1| PREDICTED: Canis familiaris similar to CG5514-PB, isoform B (LOC612987), mRNA Length = 1367 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggct 169 |||||||||||||||||| |||||| Sbjct: 77 ggcggcggcggcgggggccccggct 101
>gb|AC126019.16| Medicago truncatula clone mth2-22p22, complete sequence Length = 130044 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 2 tgctacttcaacaactactccctctcgcagccccgccacttctgc 46 |||||||||||||||||| ||||| |||||| | ||||||||| Sbjct: 127314 tgctacttcaacaactacagtctctctcagcccagacacttctgc 127270
>gb|AC058788.89| Mus musculus strain C57BL/6J clone rp23-284a9 map 5, complete sequence Length = 200015 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 ggcggcggcgggggcaccggc 168 ||||||||||||||||||||| Sbjct: 15724 ggcggcggcgggggcaccggc 15744
>ref|NM_003111.3| Homo sapiens Sp3 transcription factor (SP3), transcript variant 1, mRNA Length = 3920 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 cggcggcggcgggggcaccggctgc 171 |||||||||||||||| |||||||| Sbjct: 438 cggcggcggcgggggccccggctgc 414
>ref|NM_001017371.3| Homo sapiens Sp3 transcription factor (SP3), transcript variant 2, mRNA Length = 3980 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 cggcggcggcgggggcaccggctgc 171 |||||||||||||||| |||||||| Sbjct: 454 cggcggcggcgggggccccggctgc 430
>emb|AL031283.26|HS467K16 Human DNA sequence from clone RP3-467K16 on chromosome 1p36.11-36.23 Contains the 3' end of the gene for a novel protein (FLJ25234, KIAA1937, FLJ36564, FLJ39642, FLJ35981), three novel genes, the gene for a novel EF Hand domain-containing protein (MGC4342), the CTRC gene for chymotrypsin C (caldecrin) and a CpG island, complete sequence Length = 175964 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 129724 ggcggcggcggcgggggcacc 129744
>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07, complete sequence Length = 87592 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgccg 434 ||||||||||||||||||||| Sbjct: 59312 gcggcggcggtggtggcgccg 59292
>emb|X94126.1|MMSOX1 M.musculus SOX1 gene Length = 2376 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 547 ggcggcggcggcgggggcacc 567
>gb|BC068473.1| Homo sapiens EF-hand domain family, member D2, mRNA (cDNA clone MGC:87102 IMAGE:5267148), complete cds Length = 2264 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 152 ggcggcggcggcgggggcacc 172
>gb|BC023611.2| Homo sapiens EF-hand domain family, member D2, mRNA (cDNA clone MGC:23298 IMAGE:4638660), complete cds Length = 2387 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 129 ggcggcggcggcgggggcacc 149
>gb|BC007233.1| Homo sapiens EF-hand domain family, member D2, mRNA (cDNA clone MGC:15408 IMAGE:2961350), complete cds Length = 2382 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 137 ggcggcggcggcgggggcacc 157
>gb|BC014923.2| Homo sapiens EF-hand domain family, member D2, mRNA (cDNA clone MGC:17894 IMAGE:3909362), complete cds Length = 2265 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 133 ggcggcggcggcgggggcacc 153
>emb|AJ310752.1|HSA310752 Homo sapiens partial mRNA for transcription factor SP3 (SP3 gene) Length = 300 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 cggcggcggcgggggcaccggctgc 171 |||||||||||||||| |||||||| Sbjct: 238 cggcggcggcgggggccccggctgc 214
>gb|AC113579.3| Tetraodon nigroviridis clone GSTNA-27O10, complete sequence Length = 79804 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 47164 ggcggcggcggcgggggcacc 47184
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 gatgctgcagaacggcggcgg 282 ||||||||||||||||||||| Sbjct: 2415560 gatgctgcagaacggcggcgg 2415540
>emb|CR616014.1| full-length cDNA clone CS0DL008YM03 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 2210 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 140 ggcggcggcggcgggggcacc 160
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 tcgggtgggtcgacgacgacg 205 ||||||||||||||||||||| Sbjct: 3080781 tcgggtgggtcgacgacgacg 3080801
>dbj|AK032564.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430596N04 product:DISKS LARGE-ASSOCIATED PROTEIN 2 (DAP-2) (SAP90/PSD-95-ASSOCIATED PROTEIN 2) (SAPAP2) (PSD-95/SAP90 BINDING PROTEIN 2) (FRAGMENT) homolog [Rattus norvegicus], full insert sequence Length = 4505 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 412 gcgcggcggcggtggtggcgc 432 ||||||||||||||||||||| Sbjct: 43 gcgcggcggcggtggtggcgc 63
>dbj|AK030386.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330405N19 product:hypothetical protein, full insert sequence Length = 4173 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 149 gcggcggcgggggcaccggctgcca 173 |||||||||||||||||||| |||| Sbjct: 487 gcggcggcgggggcaccggcggcca 463
>gb|AF372833.1|AF372833 Oryza sativa phosphoenolpyruvate/phosphate translocator mRNA, complete cds Length = 1588 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgccg 434 ||||||||||||||||||||| Sbjct: 105 gcggcggcggtggtggcgccg 85
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 gccgccgctgcttcgcctcgc 324 ||||||||||||||||||||| Sbjct: 21755338 gccgccgctgcttcgcctcgc 21755318 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctgccgcgcctgccgccgct 62 |||||||||||||||||||| Sbjct: 14782899 ctgccgcgcctgccgccgct 14782880 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tgcagaacggcggcggcggc 286 |||||||||||||||||||| Sbjct: 7547498 tgcagaacggcggcggcggc 7547479 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||| ||||||||| Sbjct: 2790684 ggcggcggcggcggcggcaccggc 2790661
>dbj|AB221704.1| Synthetic construct Mus musculus DNA, clone:V02Y056A05 Length = 1215 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 ggcggcggcgggggcaccggc 168 ||||||||||||||||||||| Sbjct: 943 ggcggcggcgggggcaccggc 963
>gb|M97191.2|HUMSP3A Homo sapiens Sp3 protein mRNA, partial cds Length = 2217 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 cggcggcggcgggggcaccggctgc 171 |||||||||||||||| |||||||| Sbjct: 65 cggcggcggcgggggccccggctgc 41
>gb|AC016737.8| Homo sapiens BAC clone RP11-394I13 from 2, complete sequence Length = 196085 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 cggcggcggcgggggcaccggctgc 171 |||||||||||||||| |||||||| Sbjct: 28062 cggcggcggcgggggccccggctgc 28086
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 cgcggcggcggtggtggcgcc 433 ||||||||||||||||||||| Sbjct: 5595293 cgcggcggcggtggtggcgcc 5595273 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 277 cggcggcggcaacctgtccggcctc 301 |||||||||||||||||||| |||| Sbjct: 5405018 cggcggcggcaacctgtccgacctc 5404994 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 cggcggcggtggtggcgccg 434 |||||||||||||||||||| Sbjct: 2941850 cggcggcggtggtggcgccg 2941869
>ref|NM_172910.1| Mus musculus discs, large (Drosophila) homolog-associated protein 2 (Dlgap2), mRNA Length = 4505 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 412 gcgcggcggcggtggtggcgc 432 ||||||||||||||||||||| Sbjct: 43 gcgcggcggcggtggtggcgc 63
>ref|XM_344122.2| PREDICTED: Rattus norvegicus similar to nemo like kinase (LOC363942), mRNA Length = 4174 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 caagcaggcggcggcggcgggggca 163 ||||||| ||||||||||||||||| Sbjct: 13 caagcagccggcggcggcgggggca 37
>ref|XM_573152.1| PREDICTED: Rattus norvegicus similar to nemo like kinase (LOC497961), mRNA Length = 4442 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 caagcaggcggcggcggcgggggca 163 ||||||| ||||||||||||||||| Sbjct: 165 caagcagccggcggcggcgggggca 189
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 412 gcgcggcggcggtggtggcgc 432 ||||||||||||||||||||| Sbjct: 2987336 gcgcggcggcggtggtggcgc 2987316 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 acgacgacgtcatcgacgac 216 |||||||||||||||||||| Sbjct: 442987 acgacgacgtcatcgacgac 442968
>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A10 Length = 137348 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgccg 434 ||||||||||||||||||||| Sbjct: 69072 gcggcggcggtggtggcgccg 69052
>dbj|AB108672.1| Mus musculus Sox1 mRNA for transcriptional factor SOX1, complete cds Length = 1220 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcacc 165 ||||||||||||||||||||| Sbjct: 151 ggcggcggcggcgggggcacc 171
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1381_H04 Length = 130961 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 gcggcggcggtggtggcgccg 434 ||||||||||||||||||||| Sbjct: 23404 gcggcggcggtggtggcgccg 23424
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0592C05 Length = 150478 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 gcggcggcggtggtggcgccg 434 ||||||||||||||||||||| Sbjct: 123378 gcggcggcggtggtggcgccg 123398
>gb|AE005051.1| Halobacterium sp. NRC-1 section 82 of 170 of the complete genome Length = 11846 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 tcgacgacgacgtcatcgacg 214 ||||||||||||||||||||| Sbjct: 2187 tcgacgacgacgtcatcgacg 2207
>dbj|AK107389.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-C10, full insert sequence Length = 1494 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 aggcggcggcggcgggggcaccggc 168 ||||||||||||||| ||||||||| Sbjct: 403 aggcggcggcggcggcggcaccggc 379
>dbj|AK102715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105C09, full insert sequence Length = 3192 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgccg 434 ||||||||||||||||||||| Sbjct: 358 gcggcggcggtggtggcgccg 338
>dbj|AK101399.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037E13, full insert sequence Length = 3441 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgccg 434 ||||||||||||||||||||| Sbjct: 136 gcggcggcggtggtggcgccg 116
>dbj|AK071036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080P10, full insert sequence Length = 1672 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgccg 434 ||||||||||||||||||||| Sbjct: 172 gcggcggcggtggtggcgccg 152
>gb|AF153046.1|AF153046 Mus musculus homeodomain protein HB9 mRNA, complete cds Length = 2018 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 ggcggcggcgggggcaccggc 168 ||||||||||||||||||||| Sbjct: 1138 ggcggcggcgggggcaccggc 1158
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 gatgctgcagaacggcggcgg 282 ||||||||||||||||||||| Sbjct: 2435632 gatgctgcagaacggcggcgg 2435612
>gb|AC104548.6| Mus musculus chromosome 5, clone RP24-83N12, complete sequence Length = 214247 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggc 168 ||||||||||||||||||||| Sbjct: 58457 ggcggcggcgggggcaccggc 58437
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 gccgccgctgcttcgcctcgc 324 ||||||||||||||||||||| Sbjct: 22065537 gccgccgctgcttcgcctcgc 22065517 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctgccgcgcctgccgccgct 62 |||||||||||||||||||| Sbjct: 14863336 ctgccgcgcctgccgccgct 14863317 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tgcagaacggcggcggcggc 286 |||||||||||||||||||| Sbjct: 7617584 tgcagaacggcggcggcggc 7617565 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||| ||||||||| Sbjct: 2799715 ggcggcggcggcggcggcaccggc 2799692
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 aggcggcggcggcgggggcaccggc 168 ||||||||||||||| ||||||||| Sbjct: 73319 aggcggcggcggcggcggcaccggc 73295
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 aggcggcggcggcgggggcaccggc 168 ||||||||||||||| ||||||||| Sbjct: 101170 aggcggcggcggcggcggcaccggc 101146
>gb|AF494280.1| Homo sapiens GC-binding transcription factor Sp3 gene, partial cds Length = 9596 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 cggcggcggcgggggcaccggctgc 171 |||||||||||||||| |||||||| Sbjct: 1937 cggcggcggcgggggccccggctgc 1913
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgccg 434 ||||||||||||||||||||| Sbjct: 63553 gcggcggcggtggtggcgccg 63533
>dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0648C09 Length = 107522 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgccg 434 ||||||||||||||||||||| Sbjct: 84404 gcggcggcggtggtggcgccg 84384
>gb|BC073988.1| Homo sapiens formin-like 1, mRNA (cDNA clone IMAGE:5729432), partial cds Length = 2590 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||| ||||||||| Sbjct: 568 ggcggcggcggcggaggcaccggc 545
>ref|XM_550218.1| Oryza sativa (japonica cultivar-group), mRNA Length = 702 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctgccgcgcctgccgccgct 62 |||||||||||||||||||| Sbjct: 378 ctgccgcgcctgccgccgct 359
>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10, complete sequence Length = 150825 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 aacggcggcggcggcaacct 291 |||||||||||||||||||| Sbjct: 1069 aacggcggcggcggcaacct 1050
>ref|XM_515067.1| PREDICTED: Pan troglodytes splicing factor 3a, subunit 1, 120kDa (LOC458750), mRNA Length = 2568 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggctgc 171 ||||||||||||||||||| |||| Sbjct: 41 ggcggcggcgggggcaccgcctgc 18
>ref|XM_480162.1| Oryza sativa (japonica cultivar-group), mRNA Length = 186 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 aacggcggcggcggcaacct 291 |||||||||||||||||||| Sbjct: 160 aacggcggcggcggcaacct 179
>ref|XM_521691.1| PREDICTED: Pan troglodytes LOC466291 (LOC466291), mRNA Length = 1206 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||||||| ||||| Sbjct: 52 ggcggcggcggcgggggcgccggc 75
>ref|XM_468349.1| Oryza sativa (japonica cultivar-group), mRNA Length = 516 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 gcgcggcggcggtggtggcg 431 |||||||||||||||||||| Sbjct: 125 gcgcggcggcggtggtggcg 144
>ref|NM_001003260.1| Canis familiaris thyroid transcription factor 1 (TITF1), mRNA Length = 1116 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggctgcc 172 |||||||||||||||||| |||| |||| Sbjct: 706 ggcggcggcggcgggggcgccgggtgcc 733
>ref|NM_189958.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 942 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggc 168 ||||||||||||||||||| |||| Sbjct: 676 ggcggcggcggcgggggcaacggc 699
>ref|XM_463583.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2052 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||| ||||||||| Sbjct: 194 ggcggcggcggcggcggcaccggc 171
>ref|NM_191171.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1638 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||| ||||||||| Sbjct: 57 ggcggcggcggcggcggcaccggc 80
>ref|NM_005892.3| Homo sapiens formin-like 1 (FMNL1), mRNA Length = 3973 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||| ||||||||| Sbjct: 2020 ggcggcggcggcggaggcaccggc 1997
>ref|XM_477220.1| Oryza sativa (japonica cultivar-group), mRNA Length = 846 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcac 164 |||||||||||||||||||| Sbjct: 83 ggcggcggcggcgggggcac 102
>ref|XM_472026.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2250 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgcc 433 |||||||||||||||||||| Sbjct: 161 gcggcggcggtggtggcgcc 142
>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08, complete sequence Length = 132017 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcac 164 |||||||||||||||||||| Sbjct: 33784 ggcggcggcggcgggggcac 33765
>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01, complete sequence Length = 122768 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 caagcaggcggcggcggcgg 158 |||||||||||||||||||| Sbjct: 62672 caagcaggcggcggcggcgg 62653
>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091I11, complete sequence Length = 135993 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tgcagaacggcggcggcggc 286 |||||||||||||||||||| Sbjct: 6583 tgcagaacggcggcggcggc 6564
>gb|AC119671.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084F23, complete sequence Length = 89829 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tgcagaacggcggcggcggc 286 |||||||||||||||||||| Sbjct: 10602 tgcagaacggcggcggcggc 10621
>gb|AC145325.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0034E03 map near 50283S, complete sequence Length = 134074 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ctgccgcgcctgccgccgct 62 |||||||||||||||||||| Sbjct: 44161 ctgccgcgcctgccgccgct 44180
>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041C22, complete sequence Length = 161172 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctgccgcgcctgccgccgct 62 |||||||||||||||||||| Sbjct: 6432 ctgccgcgcctgccgccgct 6413
>gb|AC119897.8| Mus musculus chromosome 1, clone RP24-227F14, complete sequence Length = 195375 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agcaggcggcggcggcgggg 160 |||||||||||||||||||| Sbjct: 141367 agcaggcggcggcggcgggg 141386
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||| ||||||||| Sbjct: 70491 ggcggcggcggcggcggcaccggc 70468
>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10, complete sequence Length = 149870 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcac 164 |||||||||||||||||||| Sbjct: 143448 ggcggcggcggcgggggcac 143429
>ref|XM_366254.1| Magnaporthe grisea 70-15 hypothetical protein (MG10473.4) partial mRNA Length = 1476 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggc 168 ||||||||||||||| |||||||| Sbjct: 1168 ggcggcggcggcgggcgcaccggc 1191
>ref|XM_370437.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06934.4) partial mRNA Length = 1254 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||| ||||||||| Sbjct: 660 ggcggcggcggcggcggcaccggc 683
>ref|XM_878225.1| PREDICTED: Bos taurus similar to Splicing factor 3 subunit 1 (Spliceosome associated protein 114) (SAP 114) (SF3a120), transcript variant 6 (LOC504381), mRNA Length = 2908 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggctgc 171 ||||||||||||||||||| |||| Sbjct: 167 ggcggcggcgggggcaccgcctgc 144
>ref|XM_878187.1| PREDICTED: Bos taurus similar to Splicing factor 3 subunit 1 (Spliceosome associated protein 114) (SAP 114) (SF3a120), transcript variant 5 (LOC504381), mRNA Length = 2953 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggctgc 171 ||||||||||||||||||| |||| Sbjct: 167 ggcggcggcgggggcaccgcctgc 144
>ref|XM_878151.1| PREDICTED: Bos taurus similar to Splicing factor 3 subunit 1 (Spliceosome associated protein 114) (SAP 114) (SF3a120), transcript variant 4 (LOC504381), mRNA Length = 2668 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggctgc 171 ||||||||||||||||||| |||| Sbjct: 167 ggcggcggcgggggcaccgcctgc 144
>ref|XM_580491.2| PREDICTED: Bos taurus similar to Splicing factor 3 subunit 1 (Spliceosome associated protein 114) (SAP 114) (SF3a120), transcript variant 2 (LOC504381), mRNA Length = 2676 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggctgc 171 ||||||||||||||||||| |||| Sbjct: 127 ggcggcggcgggggcaccgcctgc 104
>ref|XM_866266.1| PREDICTED: Bos taurus similar to Splicing factor 3 subunit 1 (Spliceosome associated protein 114) (SAP 114) (SF3a120), transcript variant 3 (LOC504381), mRNA Length = 2905 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggctgc 171 ||||||||||||||||||| |||| Sbjct: 167 ggcggcggcgggggcaccgcctgc 144
>gb|BC007684.2| Homo sapiens splicing factor 3a, subunit 1, 120kDa, mRNA (cDNA clone MGC:3569 IMAGE:3634035), complete cds Length = 2935 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggctgc 171 ||||||||||||||||||| |||| Sbjct: 163 ggcggcggcgggggcaccgcctgc 140
>gb|BC001976.1| Homo sapiens splicing factor 3a, subunit 1, 120kDa, mRNA (cDNA clone MGC:5589 IMAGE:3459964), complete cds Length = 2910 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggctgc 171 ||||||||||||||||||| |||| Sbjct: 136 ggcggcggcgggggcaccgcctgc 113
>ref|XM_958403.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein B15I20.160 [imported] - Neurospora crassa OR74A ) (NCU05408.1) partial mRNA Length = 852 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 caagcaggcggcggcggcgg 158 |||||||||||||||||||| Sbjct: 198 caagcaggcggcggcggcgg 217
>ref|XM_325262.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein B15I20.160 [imported] - Neurospora crassa OR74A ) (NCU05408.1) partial mRNA Length = 852 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 caagcaggcggcggcggcgg 158 |||||||||||||||||||| Sbjct: 198 caagcaggcggcggcggcgg 217
>ref|NM_005877.4| Homo sapiens splicing factor 3a, subunit 1, 120kDa (SF3A1), transcript variant 1, mRNA Length = 5136 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggctgc 171 ||||||||||||||||||| |||| Sbjct: 173 ggcggcggcgggggcaccgcctgc 150
>ref|NM_001005409.1| Homo sapiens splicing factor 3a, subunit 1, 120kDa (SF3A1), transcript variant 2, mRNA Length = 4941 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggctgc 171 ||||||||||||||||||| |||| Sbjct: 173 ggcggcggcgggggcaccgcctgc 150
>ref|NM_017522.3| Homo sapiens low density lipoprotein receptor-related protein 8, apolipoprotein e receptor (LRP8), transcript variant 3, mRNA Length = 3739 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggc 168 ||||||||||||||||||| |||| Sbjct: 25 ggcggcggcggcgggggcagcggc 48
>ref|NM_033300.2| Homo sapiens low density lipoprotein receptor-related protein 8, apolipoprotein e receptor (LRP8), transcript variant 2, mRNA Length = 4097 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggc 168 ||||||||||||||||||| |||| Sbjct: 120 ggcggcggcggcgggggcagcggc 143
>ref|NM_004631.3| Homo sapiens low density lipoprotein receptor-related protein 8, apolipoprotein e receptor (LRP8), transcript variant 1, mRNA Length = 4528 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggc 168 ||||||||||||||||||| |||| Sbjct: 25 ggcggcggcggcgggggcagcggc 48
>ref|NM_001018054.1| Homo sapiens low density lipoprotein receptor-related protein 8, apolipoprotein e receptor (LRP8), transcript variant 4, mRNA Length = 4351 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggc 168 ||||||||||||||||||| |||| Sbjct: 25 ggcggcggcggcgggggcagcggc 48
>ref|NM_030197.1| Mus musculus RIKEN cDNA 2700078E11 gene (2700078E11Rik), mRNA Length = 2619 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcaccggc 168 ||||||||||||||||||| |||| Sbjct: 415 ggcggcggcggcgggggcagcggc 392
>gb|AC105319.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1657_H11, complete sequence Length = 98103 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 aacggcggcggcggcaacct 291 |||||||||||||||||||| Sbjct: 38004 aacggcggcggcggcaacct 37985
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gcggcggcaacctgtccggc 298 |||||||||||||||||||| Sbjct: 4579539 gcggcggcaacctgtccggc 4579520
>ref|NM_138357.1| Homo sapiens chromosome 10 open reading frame 42 (C10orf42), mRNA Length = 2978 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||||||| ||||| Sbjct: 70 ggcggcggcggcgggggcgccggc 93
>ref|XM_860794.1| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 6 (LOC477538), mRNA Length = 2867 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggctgc 171 ||||||||||||||||||| |||| Sbjct: 134 ggcggcggcgggggcaccgcctgc 111
>ref|XM_860778.1| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 5 (LOC477538), mRNA Length = 2840 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggctgc 171 ||||||||||||||||||| |||| Sbjct: 134 ggcggcggcgggggcaccgcctgc 111
>ref|XM_847423.1| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 2 (LOC477538), mRNA Length = 2843 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggctgc 171 ||||||||||||||||||| |||| Sbjct: 134 ggcggcggcgggggcaccgcctgc 111
>ref|XM_860750.1| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 4 (LOC477538), mRNA Length = 2840 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggctgc 171 ||||||||||||||||||| |||| Sbjct: 134 ggcggcggcgggggcaccgcctgc 111
>ref|XM_860739.1| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 3 (LOC477538), mRNA Length = 2702 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggctgc 171 ||||||||||||||||||| |||| Sbjct: 134 ggcggcggcgggggcaccgcctgc 111
>ref|XM_534733.2| PREDICTED: Canis familiaris similar to splicing factor 3a, subunit 1, 120kDa isoform 2, transcript variant 1 (LOC477538), mRNA Length = 2921 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 ggcggcggcgggggcaccggctgc 171 ||||||||||||||||||| |||| Sbjct: 164 ggcggcggcgggggcaccgcctgc 141
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 gcggcggcggcaacctgtcc 295 |||||||||||||||||||| Sbjct: 2408801 gcggcggcggcaacctgtcc 2408820
>ref|XM_755907.1| Ustilago maydis 521 hypothetical protein (UM04853.1) partial mRNA Length = 4572 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 tcgacgccatgagcctcggc 349 |||||||||||||||||||| Sbjct: 1391 tcgacgccatgagcctcggc 1410
>gb|BC010682.1| Homo sapiens chromosome 10 open reading frame 42, mRNA (cDNA clone IMAGE:3866821), partial cds Length = 2856 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||||||| ||||| Sbjct: 27 ggcggcggcggcgggggcgccggc 50
>gb|BC021906.1| Homo sapiens formin-like 1, mRNA (cDNA clone IMAGE:4343469), complete cds Length = 2383 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||| ||||||||| Sbjct: 531 ggcggcggcggcggaggcaccggc 508
>ref|XM_538893.2| PREDICTED: Canis familiaris similar to Proto-oncogene serine/threonine-protein kinase Pim-1 (LOC481772), mRNA Length = 2472 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||| ||||||||| Sbjct: 347 ggcggcggcggcggcggcaccggc 370
>emb|X65165.1|VCISGMR V.carteri ISG mRNA for extensin Length = 1395 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gcgcggcggcggtggtggcg 431 |||||||||||||||||||| Sbjct: 831 gcgcggcggcggtggtggcg 812
>gb|AF521671.1| Homo sapiens SWI/SNF chromatin remodeling complex subunit OSA2 (OSA2) mRNA, partial cds Length = 7757 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 caggcggcggcggcgggggc 162 |||||||||||||||||||| Sbjct: 1153 caggcggcggcggcgggggc 1172
>gb|AC124733.4| Mus musculus BAC clone RP23-306C18 from 12, complete sequence Length = 206837 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgcc 433 |||||||||||||||||||| Sbjct: 77261 gcggcggcggtggtggcgcc 77242
>ref|NM_017519.1| Homo sapiens AT rich interactive domain 1B (SWI1-like) (ARID1B), transcript variant 1, mRNA Length = 8246 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 caggcggcggcggcgggggc 162 |||||||||||||||||||| Sbjct: 1344 caggcggcggcggcgggggc 1363
>ref|NM_020732.2| Homo sapiens AT rich interactive domain 1B (SWI1-like) (ARID1B), transcript variant 2, mRNA Length = 8126 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 caggcggcggcggcgggggc 162 |||||||||||||||||||| Sbjct: 1344 caggcggcggcggcgggggc 1363
>ref|XM_546704.2| PREDICTED: Canis familiaris similar to low density lipoprotein receptor-related protein 8 (LOC489584), mRNA Length = 3559 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggc 168 ||||||||||||||||||| |||| Sbjct: 324 ggcggcggcggcgggggcagcggc 347
>gb|BC052034.1| Mus musculus tripartite motif protein 9, mRNA (cDNA clone MGC:62392 IMAGE:5684877), complete cds Length = 2413 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgcc 433 |||||||||||||||||||| Sbjct: 349 gcggcggcggtggtggcgcc 330
>gb|BC006221.2| Homo sapiens thyroid transcription factor 1, mRNA (cDNA clone MGC:10523 IMAGE:3941576), complete cds Length = 2131 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggctgcc 172 ||||| ||||||||||||||||| |||| Sbjct: 826 ggcgggggcggcgggggcaccgggtgcc 853
>gb|AC108409.8| Mus musculus chromosome 19, clone RP23-84G7, complete sequence Length = 270854 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggc 168 ||||||||||||||||||| |||| Sbjct: 127144 ggcggcggcggcgggggcagcggc 127167
>ref|NM_175863.2| Homo sapiens AT rich interactive domain 1B (SWI1-like) (ARID1B), transcript variant 3, mRNA Length = 8087 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 caggcggcggcggcgggggc 162 |||||||||||||||||||| Sbjct: 1344 caggcggcggcggcgggggc 1363
>ref|NM_019318.1| Rattus norvegicus v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) (Maf), mRNA Length = 1944 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcac 164 |||||||||||||||||||| Sbjct: 861 ggcggcggcggcgggggcac 880
>ref|NM_130420.1| Rattus norvegicus tripartite motif protein 9 (Trim9), mRNA Length = 3689 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 gcggcggcggtggtggcgcc 433 |||||||||||||||||||| Sbjct: 61 gcggcggcggtggtggcgcc 42
>emb|AL772363.15| Human DNA sequence from clone RP11-974F22 on chromosome 9 Contains the 5' end of the CACNA1B gene for alpha 1B subunit of L type voltage-dependent calcium channel and two CpG islands, complete sequence Length = 121478 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ctccaccttctccagcatgg 368 |||||||||||||||||||| Sbjct: 81421 ctccaccttctccagcatgg 81402
>gb|BC064572.1| Homo sapiens formin-like 1, mRNA (cDNA clone IMAGE:5732058), containing frame-shift errors Length = 2100 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||| ||||||||| Sbjct: 102 ggcggcggcggcggaggcaccggc 79
>gb|BC040232.1| Homo sapiens coiled-coil domain containing 88, mRNA (cDNA clone IMAGE:5165679), containing frame-shift errors Length = 2389 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggcctcctgccgccgctgc 314 |||||||||||||||||||| Sbjct: 877 cggcctcctgccgccgctgc 858
>emb|AL356579.24| Human DNA sequence from clone RP11-593A16 on chromosome 6 Contains the 5' end of the gene for KIAA1798 protein and a CpG island, complete sequence Length = 172816 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggcggcggcggcgggggcaccggc 168 |||||||||||||| ||||||||| Sbjct: 148971 ggcggcggcggcggcggcaccggc 148994
>emb|AL355297.20| Human DNA sequence from clone RP11-230C9 on chromosome 6 Contains the gene for DAN15 protein, a H3 histone, family 3A (H3F3A) (H3F3, H3.3A) pseudogene, the 5' end of the gene for BRG1-binding protein ELD/OSA1 (p250R KIAA1235) and four CpG islands, complete sequence Length = 169218 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 caggcggcggcggcgggggc 162 |||||||||||||||||||| Sbjct: 154173 caggcggcggcggcgggggc 154192 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,324,972 Number of Sequences: 3902068 Number of extensions: 4324972 Number of successful extensions: 288455 Number of sequences better than 10.0: 388 Number of HSP's better than 10.0 without gapping: 417 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 257965 Number of HSP's gapped (non-prelim): 30130 length of query: 436 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 414 effective length of database: 17,147,199,772 effective search space: 7098940705608 effective search space used: 7098940705608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
