ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast69c07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191225.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 816 Score = 103 bits (52), Expect = 5e-19 Identities = 133/160 (83%) Strand = Plus / Plus Query: 252 gggcagaggaagccgggagggatacgcagggagccgtcgttctcgcggtggtgcaaggac 311 ||||||||||| | ||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 502 gggcagaggaaacagggcgggatccgcagggagccgtcgttctcgcggtggtgcaaggac 561 Query: 312 ccatccgcggcgtccaatgcccactccggagccgcttcgccggcctctgcaccgagcgac 371 ||||| ||||||||||| | | || | ||| || || ||||| || | |||||| Sbjct: 562 tgctccgccatgtccaatgccccccctgggggcgcctcccctgcctcggcggccagcgac 621 Query: 372 gatgactcggaggagttcgagctgccgcttctgccgtccg 411 || || || |||||||||||||| ||||||||||| |||| Sbjct: 622 gacgattccgaggagttcgagcttccgcttctgccctccg 661
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 103 bits (52), Expect = 5e-19 Identities = 133/160 (83%) Strand = Plus / Plus Query: 252 gggcagaggaagccgggagggatacgcagggagccgtcgttctcgcggtggtgcaaggac 311 ||||||||||| | ||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 31388489 gggcagaggaaacagggcgggatccgcagggagccgtcgttctcgcggtggtgcaaggac 31388548 Query: 312 ccatccgcggcgtccaatgcccactccggagccgcttcgccggcctctgcaccgagcgac 371 ||||| ||||||||||| | | || | ||| || || ||||| || | |||||| Sbjct: 31388549 tgctccgccatgtccaatgccccccctgggggcgcctcccctgcctcggcggccagcgac 31388608 Query: 372 gatgactcggaggagttcgagctgccgcttctgccgtccg 411 || || || |||||||||||||| ||||||||||| |||| Sbjct: 31388609 gacgattccgaggagttcgagcttccgcttctgccctccg 31388648 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 cgccgcggcttcgccgccgccgccg 77 ||||||||| ||||||||||||||| Sbjct: 13244848 cgccgcggcctcgccgccgccgccg 13244872 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 55 ccgcggcttcgccgccgccgccgatgag 82 ||||| ||||||||||||||||| |||| Sbjct: 6431665 ccgcgccttcgccgccgccgccgctgag 6431692 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 4070067 cggcttcgccgccgccgccg 4070086
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 103 bits (52), Expect = 5e-19 Identities = 133/160 (83%) Strand = Plus / Plus Query: 252 gggcagaggaagccgggagggatacgcagggagccgtcgttctcgcggtggtgcaaggac 311 ||||||||||| | ||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 142772 gggcagaggaaacagggcgggatccgcagggagccgtcgttctcgcggtggtgcaaggac 142831 Query: 312 ccatccgcggcgtccaatgcccactccggagccgcttcgccggcctctgcaccgagcgac 371 ||||| ||||||||||| | | || | ||| || || ||||| || | |||||| Sbjct: 142832 tgctccgccatgtccaatgccccccctgggggcgcctcccctgcctcggcggccagcgac 142891 Query: 372 gatgactcggaggagttcgagctgccgcttctgccgtccg 411 || || || |||||||||||||| ||||||||||| |||| Sbjct: 142892 gacgattccgaggagttcgagcttccgcttctgccctccg 142931
>dbj|AK103588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133C05, full insert sequence Length = 2210 Score = 103 bits (52), Expect = 5e-19 Identities = 133/160 (83%) Strand = Plus / Plus Query: 252 gggcagaggaagccgggagggatacgcagggagccgtcgttctcgcggtggtgcaaggac 311 ||||||||||| | ||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 320 gggcagaggaaacagggcgggatccgcagggagccgtcgttctcgcggtggtgcaaggac 379 Query: 312 ccatccgcggcgtccaatgcccactccggagccgcttcgccggcctctgcaccgagcgac 371 ||||| ||||||||||| | | || | ||| || || ||||| || | |||||| Sbjct: 380 tgctccgccatgtccaatgccccccctgggggcgcctcccctgcctcggcggccagcgac 439 Query: 372 gatgactcggaggagttcgagctgccgcttctgccgtccg 411 || || || |||||||||||||| ||||||||||| |||| Sbjct: 440 gacgattccgaggagttcgagcttccgcttctgccctccg 479
>gb|AF443622.1| Craterostigma plantagineum homeodomain leucine zipper protein CPHB-6 (CPHB-6) mRNA, complete cds Length = 1280 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 61 cttcgccgccgccgccgatgagat 84 |||||||||||||||||||||||| Sbjct: 404 cttcgccgccgccgccgatgagat 381
>ref|XM_935880.1| PREDICTED: Homo sapiens hypothetical protein LOC641819 (LOC641819), mRNA Length = 1082 Score = 46.1 bits (23), Expect = 0.094 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 392 gctgccgcttctgccgtccgccgccgccgcc 422 |||||||||||||||| |||||||||||||| Sbjct: 497 gctgccgcttctgccg-ccgccgccgccgcc 526
>ref|XM_943605.1| PREDICTED: Homo sapiens hypothetical protein LOC649165 (LOC649165), mRNA Length = 1082 Score = 46.1 bits (23), Expect = 0.094 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 392 gctgccgcttctgccgtccgccgccgccgcc 422 |||||||||||||||| |||||||||||||| Sbjct: 497 gctgccgcttctgccg-ccgccgccgccgcc 526
>ref|XM_934106.1| PREDICTED: Homo sapiens hypothetical protein LOC646968 (LOC646968), mRNA Length = 1082 Score = 46.1 bits (23), Expect = 0.094 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 392 gctgccgcttctgccgtccgccgccgccgcc 422 |||||||||||||||| |||||||||||||| Sbjct: 497 gctgccgcttctgccg-ccgccgccgccgcc 526
>gb|AC078846.2|AC078846 Homo sapiens chromosome 7 clone RP11-448A19, complete sequence Length = 219428 Score = 46.1 bits (23), Expect = 0.094 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 392 gctgccgcttctgccgtccgccgccgccgcc 422 |||||||||||||||| |||||||||||||| Sbjct: 64011 gctgccgcttctgccg-ccgccgccgccgcc 63982
>gb|AC147282.3| Pan troglodytes BAC clone RP43-86L11 from chromosome 7, complete sequence Length = 223086 Score = 46.1 bits (23), Expect = 0.094 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 392 gctgccgcttctgccgtccgccgccgccgcc 422 |||||||||||||||| |||||||||||||| Sbjct: 180556 gctgccgcttctgccg-ccgccgccgccgcc 180527
>gb|AC145873.3| Pan troglodytes BAC clone RP43-20K16 from chromosome 7, complete sequence Length = 149916 Score = 46.1 bits (23), Expect = 0.094 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 392 gctgccgcttctgccgtccgccgccgccgcc 422 |||||||||||||||| |||||||||||||| Sbjct: 56171 gctgccgcttctgccg-ccgccgccgccgcc 56200
>gb|U27701.1|HSU27701 Human nuclear respiratory factor 1 (NRF-1) gene, 5' region and partial cds Length = 271 Score = 46.1 bits (23), Expect = 0.094 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 392 gctgccgcttctgccgtccgccgccgccgcc 422 |||||||||||||||| |||||||||||||| Sbjct: 34 gctgccgcttctgccg-ccgccgccgccgcc 5
>gb|AY360385.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0095C12, complete sequence Length = 146632 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 tcgccgcggcttcgccgccgccgccg 77 |||||||||||| ||||||||||||| Sbjct: 89669 tcgccgcggctttgccgccgccgccg 89644
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 401 tctgccgtccgccgccgccgcc 422 |||||||||||||||||||||| Sbjct: 103647 tctgccgtccgccgccgccgcc 103668
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 390 gagctgccgcttctgccgtccgccgccgcc 419 ||||||||||||| ||||| |||||||||| Sbjct: 13489850 gagctgccgcttcggccgtgcgccgccgcc 13489821 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 31008654 cggcttcgccgccgccgccg 31008635 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 gccgccgccgcccaccgttt 430 |||||||||||||||||||| Sbjct: 10076334 gccgccgccgcccaccgttt 10076315
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 401 tctgccgtccgccgccgccgcc 422 |||||||||||||||||||||| Sbjct: 13935021 tctgccgtccgccgccgccgcc 13935042 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 ctgccgtccgccgccgccgcc 422 ||||||||||||||||||||| Sbjct: 22394491 ctgccgtccgccgccgccgcc 22394511 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 15380341 cggcttcgccgccgccgccg 15380322
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 tcgccgcggcttcgccgccgccgccg 77 |||||||||||| ||||||||||||| Sbjct: 13502042 tcgccgcggctttgccgccgccgccg 13502017 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 tccgccgccgccgcccaccg 427 |||||||||||||||||||| Sbjct: 19868345 tccgccgccgccgcccaccg 19868326
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 403 tgccgtccgccgccgccgcccaccgt 428 ||||| |||||||||||||||||||| Sbjct: 4698385 tgccggccgccgccgccgcccaccgt 4698410 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 tccgccgccgccgcccaccg 427 |||||||||||||||||||| Sbjct: 26098540 tccgccgccgccgcccaccg 26098559 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 cttcgccgccgccgccgatg 80 |||||||||||||||||||| Sbjct: 24460849 cttcgccgccgccgccgatg 24460868
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 403 tgccgtccgccgccgccgcccaccgt 428 ||||| |||||||||||||||||||| Sbjct: 60984 tgccggccgccgccgccgcccaccgt 61009
>dbj|AP005500.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0451H06 Length = 136473 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 tcgccgcggcttcgccgccgccgccg 77 |||||||||||| ||||||||||||| Sbjct: 40356 tcgccgcggctttgccgccgccgccg 40331
>dbj|AK103169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121F18, full insert sequence Length = 1675 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 403 tgccgtccgccgccgccgcccaccgt 428 ||||| |||||||||||||||||||| Sbjct: 367 tgccggccgccgccgccgcccaccgt 392
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 401 tctgccgtccgccgccgccgcc 422 |||||||||||||||||||||| Sbjct: 13942363 tctgccgtccgccgccgccgcc 13942384 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 ctgccgtccgccgccgccgcc 422 ||||||||||||||||||||| Sbjct: 22406559 ctgccgtccgccgccgccgcc 22406579 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 15388582 cggcttcgccgccgccgccg 15388563
>emb|AL662999.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0018A10, complete sequence Length = 133238 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 390 gagctgccgcttctgccgtccgccgccgcc 419 ||||||||||||| ||||| |||||||||| Sbjct: 17644 gagctgccgcttcggccgtgcgccgccgcc 17615
>ref|NM_197873.1| Oryza sativa (japonica cultivar-group) putative outer cell layer homeo domain protein (OSJNBa0027L23.2), mRNA Length = 2891 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 402 ctgccgtccgccgccgccgcc 422 ||||||||||||||||||||| Sbjct: 765 ctgccgtccgccgccgccgcc 745
>ref|NM_183913.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2499 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 cgccgcggcttcgccgccgccgccg 77 ||||||||| ||||||||||||||| Sbjct: 60 cgccgcggcctcgccgccgccgccg 36
>ref|XM_478877.1| Oryza sativa (japonica cultivar-group), mRNA Length = 6102 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 cgccgccgccgccgatgagat 84 ||||||||||||||||||||| Sbjct: 1641 cgccgccgccgccgatgagat 1661
>ref|XM_477571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 747 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 cgtccgccgccgccgcccacc 426 ||||||||||||||||||||| Sbjct: 136 cgtccgccgccgccgcccacc 116
>ref|NM_017610.6| Homo sapiens ring finger protein 111 (RNF111), mRNA Length = 5556 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 cgccgcggcttcgccgccgccgccg 77 |||||| |||||||||||||||||| Sbjct: 61 cgccgccgcttcgccgccgccgccg 37
>gb|DQ156121.1| Bos taurus somatostatin gene, complete cds Length = 3002 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccga 78 ||||||||||||||||||||| Sbjct: 892 cggcttcgccgccgccgccga 912
>ref|XM_387660.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07484.1) partial mRNA Length = 1608 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 ccgccgatgagatccgcgccg 92 ||||||||||||||||||||| Sbjct: 137 ccgccgatgagatccgcgccg 157
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 cgccgcggcttcgccgccgcc 73 ||||||||||||||||||||| Sbjct: 3135899 cgccgcggcttcgccgccgcc 3135919 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 tcgccgcggcttcgccgccgc 72 ||||||||||||||||||||| Sbjct: 1708835 tcgccgcggcttcgccgccgc 1708855
>gb|AE008912.1| Salmonella typhimurium LT2, section 216 of 220 of the complete genome Length = 20216 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 gcttcgccgccgccgccgatgagat 84 |||||||||||||||||||| |||| Sbjct: 10985 gcttcgccgccgccgccgatcagat 11009
>emb|BX538130.1|HSM806331 Homo sapiens mRNA; cDNA DKFZp686H1966 (from clone DKFZp686H1966); complete cds Length = 4992 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 cgccgcggcttcgccgccgccgccg 77 |||||| |||||||||||||||||| Sbjct: 62 cgccgccgcttcgccgccgccgccg 38
>gb|BC060862.1| Homo sapiens ring finger protein 111, mRNA (cDNA clone MGC:71797 IMAGE:30336202), complete cds Length = 4923 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 cgccgcggcttcgccgccgccgccg 77 |||||| |||||||||||||||||| Sbjct: 64 cgccgccgcttcgccgccgccgccg 40
>emb|AL627284.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 20/20 Length = 88037 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 gcttcgccgccgccgccgatgagat 84 |||||||||||||||||||| |||| Sbjct: 10047 gcttcgccgccgccgccgatcagat 10071
>dbj|AB211077.1| Trididemnum paracyclops gene for 18S rRNA, partial sequence, isolate:TriP4/95 Length = 2108 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 54 gccgcggcttcgccgccgccgccga 78 |||||||||||||||||| |||||| Sbjct: 958 gccgcggcttcgccgccggcgccga 982
>dbj|AB211076.1| Trididemnum paracyclops gene for 18S rRNA, partial sequence, isolate:TriP3/88 Length = 2108 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 54 gccgcggcttcgccgccgccgccga 78 |||||||||||||||||| |||||| Sbjct: 958 gccgcggcttcgccgccggcgccga 982
>dbj|AB211075.1| Trididemnum paracyclops gene for 18S rRNA, partial sequence, isolate:TriP2/44 Length = 2108 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 54 gccgcggcttcgccgccgccgccga 78 |||||||||||||||||| |||||| Sbjct: 964 gccgcggcttcgccgccggcgccga 988
>dbj|AB211074.1| Trididemnum paracyclops gene for 18S rRNA, partial sequence, isolate:TriP1/22 Length = 2108 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 54 gccgcggcttcgccgccgccgccga 78 |||||||||||||||||| |||||| Sbjct: 964 gccgcggcttcgccgccggcgccga 988
>gb|BC103253.1| Bos taurus somatostatin, mRNA (cDNA clone MGC:128461 IMAGE:7984320), complete cds Length = 654 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccga 78 ||||||||||||||||||||| Sbjct: 92 cggcttcgccgccgccgccga 112
>gb|AC148074.19| Serratia marcescens clone fosu1, complete sequence Length = 37026 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 cgccgccgccgccgatgagat 84 ||||||||||||||||||||| Sbjct: 6330 cgccgccgccgccgatgagat 6310
>gb|U97077.1|BTU97077 Bos taurus somatostatin precursor gene, complete cds Length = 1880 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccga 78 ||||||||||||||||||||| Sbjct: 526 cggcttcgccgccgccgccga 546
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 54 gccgcggcttcgccgccgccgccga 78 |||||| |||||||||||||||||| Sbjct: 3246551 gccgcgacttcgccgccgccgccga 3246575
>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete sequence Length = 143961 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 ctgccgtccgccgccgccgcc 422 ||||||||||||||||||||| Sbjct: 46514 ctgccgtccgccgccgccgcc 46534
>gb|AC092757.2| Homo sapiens chromosome 15 clone RP11-59H7 map 15q21.3, complete sequence Length = 171114 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 cgccgcggcttcgccgccgccgccg 77 |||||| |||||||||||||||||| Sbjct: 2170 cgccgccgcttcgccgccgccgccg 2146
>gb|AC025918.7| Homo sapiens chromosome 15 clone RP11-313H3 map 15q21.3, complete sequence Length = 187734 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 cgccgcggcttcgccgccgccgccg 77 |||||| |||||||||||||||||| Sbjct: 169466 cgccgccgcttcgccgccgccgccg 169442
>gb|AF322121.1|AF322121 Cleistachne sorghoides teosinte branched1 protein (tb1) gene, partial cds Length = 1059 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cttcgccgccgccgccgatga 81 ||||||||||||||||||||| Sbjct: 141 cttcgccgccgccgccgatga 161
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 cgccgccgccgccgatgagat 84 ||||||||||||||||||||| Sbjct: 23445068 cgccgccgccgccgatgagat 23445048 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 cgtccgccgccgccgcccacc 426 ||||||||||||||||||||| Sbjct: 11578762 cgtccgccgccgccgcccacc 11578742 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 26634517 cggcttcgccgccgccgccg 26634536 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 gccgtccgccgccgccgccc 423 |||||||||||||||||||| Sbjct: 12295678 gccgtccgccgccgccgccc 12295697 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 2784378 cggcttcgccgccgccgccg 2784397
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 395 gccgcttctgccgtccgccgccgcc 419 |||||||| |||||||||||||||| Sbjct: 11795253 gccgcttcggccgtccgccgccgcc 11795277 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 tcgccgccgccgccgatgag 82 |||||||||||||||||||| Sbjct: 878303 tcgccgccgccgccgatgag 878322
>ref|NM_173960.1| Bos taurus somatostatin (SST), mRNA Length = 595 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccga 78 ||||||||||||||||||||| Sbjct: 76 cggcttcgccgccgccgccga 96
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 gccgccgccgatgagatccgc 88 ||||||||||||||||||||| Sbjct: 851632 gccgccgccgatgagatccgc 851612
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 gcttcgccgccgccgccgatgagat 84 |||||||||||||||||||| |||| Sbjct: 4506984 gcttcgccgccgccgccgatcagat 4507008
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 ttcgccgccgccgccgatgag 82 ||||||||||||||||||||| Sbjct: 5867518 ttcgccgccgccgccgatgag 5867538
>dbj|AP003793.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487E11 Length = 151303 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 cgccgcggcttcgccgccgccgccg 77 ||||||||| ||||||||||||||| Sbjct: 117149 cgccgcggcctcgccgccgccgccg 117173
>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1120F06 Length = 186712 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 cgtccgccgccgccgcccacc 426 ||||||||||||||||||||| Sbjct: 142420 cgtccgccgccgccgcccacc 142400
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 cgccgccgccgccgatgagat 84 ||||||||||||||||||||| Sbjct: 5461 cgccgccgccgccgatgagat 5441
>dbj|AP006479.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1272H04 Length = 87113 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 cgtccgccgccgccgcccacc 426 ||||||||||||||||||||| Sbjct: 24134 cgtccgccgccgccgcccacc 24114
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 cgccgccgccgccgatgagat 84 ||||||||||||||||||||| Sbjct: 64965 cgccgccgccgccgatgagat 64945
>dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0477B05 Length = 142166 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 395 gccgcttctgccgtccgccgccgcc 419 |||||||| |||||||||||||||| Sbjct: 103143 gccgcttcggccgtccgccgccgcc 103167
>dbj|AK119468.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-A05, full insert sequence Length = 1470 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 cgccgcggcttcgccgccgccgccg 77 ||||||||| ||||||||||||||| Sbjct: 199 cgccgcggcctcgccgccgccgccg 175
>dbj|AK099595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044O19, full insert sequence Length = 3378 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 cgccgcggcttcgccgccgccgccg 77 ||||||||| ||||||||||||||| Sbjct: 158 cgccgcggcctcgccgccgccgccg 134
>dbj|AK071939.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087I01, full insert sequence Length = 3742 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 402 ctgccgtccgccgccgccgcc 422 ||||||||||||||||||||| Sbjct: 1128 ctgccgtccgccgccgccgcc 1108
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 gcttcgccgccgccgccgatgagat 84 |||||||||||||||||||| |||| Sbjct: 4713971 gcttcgccgccgccgccgatcagat 4713995
>dbj|AB101646.1| Oryza sativa (japonica cultivar-group) Roc3 mRNA for GL2-type homeodomain protein, complete cds Length = 3098 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 402 ctgccgtccgccgccgccgcc 422 ||||||||||||||||||||| Sbjct: 957 ctgccgtccgccgccgccgcc 937
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 gcttcgccgccgccgccgatgagat 84 |||||||||||||||||||| |||| Sbjct: 4674712 gcttcgccgccgccgccgatcagat 4674736
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 cggcttcgccgccgccgccga 78 ||||||||||||||||||||| Sbjct: 2049108 cggcttcgccgccgccgccga 2049088
>emb|X04912.1|HSREPSST Human DNA of SstI repeat member Length = 2494 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 cgccgcggcttcgccgccgccgccg 77 |||| |||||||||||||||||||| Sbjct: 996 cgcctcggcttcgccgccgccgccg 1020
>gb|M31217.1|BOVPSOMA Bovine somatostatin mRNA, complete cds Length = 595 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccga 78 ||||||||||||||||||||| Sbjct: 76 cggcttcgccgccgccgccga 96
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003A09, complete sequence Length = 167222 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tcgccgccgccgccgatgag 82 |||||||||||||||||||| Sbjct: 33421 tcgccgccgccgccgatgag 33402
>ref|XM_476099.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 876 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 cgccgcggcttcgccgccgccgcc 76 |||||| ||||||||||||||||| Sbjct: 158 cgccgccgcttcgccgccgccgcc 135
>ref|XM_550380.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1512 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 159 cggcttcgccgccgccgccg 140
>ref|NM_188471.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1554 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 55 ccgcggcttcgccgccgccgccgatgag 82 ||||| ||||||||||||||||| |||| Sbjct: 342 ccgcgccttcgccgccgccgccgctgag 369
>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence Length = 151656 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 cgccgcggcttcgccgccgccgcc 76 |||||| ||||||||||||||||| Sbjct: 31658 cgccgccgcttcgccgccgccgcc 31681
>ref|XM_482405.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2073 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 tccgccgccgccgcccaccg 427 |||||||||||||||||||| Sbjct: 239 tccgccgccgccgcccaccg 220
>ref|XM_475209.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 198 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 84 cggcttcgccgccgccgccg 65
>ref|XM_507431.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1442_E05.19 mRNA Length = 1093 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tcgccgccgccgccgatgag 82 |||||||||||||||||||| Sbjct: 150 tcgccgccgccgccgatgag 131
>ref|XM_463878.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1093 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tcgccgccgccgccgatgag 82 |||||||||||||||||||| Sbjct: 150 tcgccgccgccgccgatgag 131
>ref|XM_506685.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1442_E05.19 mRNA Length = 1325 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tcgccgccgccgccgatgag 82 |||||||||||||||||||| Sbjct: 314 tcgccgccgccgccgatgag 295
>ref|XM_519010.1| PREDICTED: Pan troglodytes similar to homeobox A2 protein; homeobox protein HOX-A2 (LOC463309), mRNA Length = 1225 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 cttctgccgtccgccgccgccgcc 422 ||||||||| |||||||||||||| Sbjct: 799 cttctgccggccgccgccgccgcc 822
>ref|NM_196703.1| Oryza sativa (japonica cultivar-group) putative putative glucosyltransferase (OSJNBa0046P18.12), mRNA Length = 1512 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 1068 cggcttcgccgccgccgccg 1087
>ref|XM_479296.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1785 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 141 cggcttcgccgccgccgccg 122
>ref|XM_476664.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1248 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 693 cggcttcgccgccgccgccg 712
>ref|XM_473853.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2337 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 442 cggcttcgccgccgccgccg 423
>gb|AC136519.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007C23, complete sequence Length = 173764 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 cgccgcggcttcgccgccgccgcc 76 |||||| ||||||||||||||||| Sbjct: 131642 cgccgccgcttcgccgccgccgcc 131665
>gb|AY023200.1| Oryza sativa microsatellite MRG5525 containing (GCG)X9, closest to marker R2658S, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 133 cggcttcgccgccgccgccg 114
>gb|AY022832.1| Oryza sativa microsatellite MRG5157 containing (CGC)X10, genomic sequence Length = 230 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 95 cggcttcgccgccgccgccg 114
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 ccgcggcttcgccgccgccgccga 78 |||| ||||||||||||||||||| Sbjct: 393591 ccgccgcttcgccgccgccgccga 393568
>gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0095K08, complete sequence Length = 180999 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 60981 cggcttcgccgccgccgccg 61000
>gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map near S2137, complete sequence Length = 197516 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 17843 cggcttcgccgccgccgccg 17824
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cgcggcttcgccgccgccgccgat 79 |||| ||||||||||||||||||| Sbjct: 1263329 cgcgacttcgccgccgccgccgat 1263352
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 ccgcggcttcgccgccgccg 74 |||||||||||||||||||| Sbjct: 2435192 ccgcggcttcgccgccgccg 2435173
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 101285 cggcttcgccgccgccgccg 101304
>ref|NM_010093.1| Mus musculus E2F transcription factor 3 (E2f3), mRNA Length = 1901 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 523 cggcttcgccgccgccgccg 542
>ref|XM_878505.1| PREDICTED: Bos taurus similar to phosphoprotein enriched in astrocytes 15 (predicted), transcript variant 2 (LOC510586), mRNA Length = 4587 Score = 40.1 bits (20), Expect = 5.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 395 gccgcttctgccgtccgccgccgccgcc 422 ||||||||||||| |||||||||||||| Sbjct: 89 gccgcttctgccg-ccgccgccgccgcc 63
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 cgccgcggcttcgccgccgccgcc 76 ||||||| |||||||||||||||| Sbjct: 1776443 cgccgcgacttcgccgccgccgcc 1776420
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cgcggcttcgccgccgccgccgat 79 |||| ||||||||||||||||||| Sbjct: 2242035 cgcgacttcgccgccgccgccgat 2242012
>gb|AC105319.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1657_H11, complete sequence Length = 98103 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 26318 cggcttcgccgccgccgccg 26337 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 6395 cggcttcgccgccgccgccg 6414
>gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosome 5, complete sequence Length = 225376 Score = 40.1 bits (20), Expect = 5.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 395 gccgcttctgccgtccgccgccgccgcc 422 ||||||||||||| |||||||||||||| Sbjct: 168013 gccgcttctgccg-ccgccgccgccgcc 167987
>gb|AC099640.6| Mus musculus chromosome 1, clone RP24-339K18, complete sequence Length = 177962 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 402 ctgccgtccgccgccgccgcccac 425 |||||| ||||||||||||||||| Sbjct: 14417 ctgccgcccgccgccgccgcccac 14440
>gb|BC021875.1| Mus musculus sno, strawberry notch homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:4212192), partial cds Length = 2389 Score = 40.1 bits (20), Expect = 5.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 395 gccgcttctgccgtccgccgccgccgcc 422 ||||||||||||| |||||||||||||| Sbjct: 18 gccgcttctgccg-ccgccgccgccgcc 44
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gcggcttcgccgccgccgcc 76 |||||||||||||||||||| Sbjct: 695607 gcggcttcgccgccgccgcc 695588 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 cgccgccgatgagatccgcgccgc 93 |||||||||||||| ||||||||| Sbjct: 637273 cgccgccgatgagagccgcgccgc 637296
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tcgccgccgccgccgatgag 82 |||||||||||||||||||| Sbjct: 1994660 tcgccgccgccgccgatgag 1994641
>gb|AC004079.1| Homo sapiens PAC clone RP1-167F23 from 7, complete sequence Length = 102717 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cttctgccgtccgccgccgccgcc 422 ||||||||| |||||||||||||| Sbjct: 84571 cttctgccggccgccgccgccgcc 84548
>ref|XM_987520.1| PREDICTED: Mus musculus zinc finger, CCHC domain containing 2, transcript variant 2 (Zcchc2), mRNA Length = 6658 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 402 ctgccgtccgccgccgccgcccac 425 |||||| ||||||||||||||||| Sbjct: 504 ctgccgcccgccgccgccgcccac 527
>ref|XM_129972.7| PREDICTED: Mus musculus zinc finger, CCHC domain containing 2, transcript variant 1 (Zcchc2), mRNA Length = 6658 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 402 ctgccgtccgccgccgccgcccac 425 |||||| ||||||||||||||||| Sbjct: 504 ctgccgcccgccgccgccgcccac 527
>gb|AC146102.2| Pan troglodytes BAC clone RP43-21L13 from 7, complete sequence Length = 191971 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cttctgccgtccgccgccgccgcc 422 ||||||||| |||||||||||||| Sbjct: 105959 cttctgccggccgccgccgccgcc 105936
>gb|AC127313.3| Mus musculus BAC clone RP23-311A21 from 5, complete sequence Length = 195651 Score = 40.1 bits (20), Expect = 5.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 395 gccgcttctgccgtccgccgccgccgcc 422 ||||||||||||| |||||||||||||| Sbjct: 1733 gccgcttctgccg-ccgccgccgccgcc 1707
>gb|AC142285.1| Pan troglodytes BAC clone RP43-169B4 from 7, complete sequence Length = 170237 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cttctgccgtccgccgccgccgcc 422 ||||||||| |||||||||||||| Sbjct: 125880 cttctgccggccgccgccgccgcc 125857
>gb|DQ383389.1| Oryza nivara voucher IRGC 105801 shattering protein (sh4) gene, partial cds Length = 1639 Score = 40.1 bits (20), Expect = 5.8 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 392 gctgccgcttctgccgtccgccgccgccgccc 423 ||||||||||| |||| ||||||||||||||| Sbjct: 1389 gctgccgcttccgccg-ccgccgccgccgccc 1419
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cgcggcttcgccgccgccgc 75 |||||||||||||||||||| Sbjct: 80367 cgcggcttcgccgccgccgc 80386
>emb|AL132775.29|HSDJ46C2 Human DNA sequence from clone RP1-46C2 on chromosome 6p22.2-23 Contains the 5' end of the E2F3 gene for E2F transcription factor 3 (E2F-3, KIAA0075) and two CpG islands, complete sequence Length = 109902 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 96792 cggcttcgccgccgccgccg 96811
>gb|AF547386.1| Homo sapiens E2F transcription factor 3 (E2F3) gene, complete cds Length = 93003 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 625 cggcttcgccgccgccgccg 644
>emb|Y10479.1|HSE2F3TF H.sapiens mRNA for E2F-3 transcription factor Length = 1515 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 192 cggcttcgccgccgccgccg 211
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 cgccgcggcttcgccgccgccgcc 76 ||||||| |||||||||||||||| Sbjct: 3111743 cgccgcgacttcgccgccgccgcc 3111720
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cgcggcttcgccgccgccgccgat 79 |||| ||||||||||||||||||| Sbjct: 2132648 cgcgacttcgccgccgccgccgat 2132671
>emb|AL607007.3|OSJN00118 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0018J12, complete sequence Length = 120004 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 gccgccgccgcccaccgttt 430 |||||||||||||||||||| Sbjct: 56818 gccgccgccgcccaccgttt 56799
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 106027 cggcttcgccgccgccgccg 106008
>emb|AL513025.13| Mouse DNA sequence from clone RP23-235O1 on chromosome 13 Contains the 5' end of a novel gene, the E2f3 gene for E2F transcription factor 3, a novel gene and two CpG islands, complete sequence Length = 197940 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 188260 cggcttcgccgccgccgccg 188241
>emb|CR861381.1| Pongo pygmaeus mRNA; cDNA DKFZp459A112 (from clone DKFZp459A112) Length = 4455 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 gccgcggcttcgccgccgccgccg 77 ||||| |||||||||||||||||| Sbjct: 29 gccgccgcttcgccgccgccgccg 6
>emb|BX546482.15| Zebrafish DNA sequence from clone DKEY-226B20 in linkage group 13, complete sequence Length = 206949 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggcagaggaagccgggaggg 272 |||||||||||||||||||| Sbjct: 127178 ggcagaggaagccgggaggg 127159
>dbj|AK096742.1| Homo sapiens cDNA FLJ39423 fis, clone PROST1000322, highly similar to HOMEOBOX PROTEIN HOX-A2 Length = 1993 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 cttctgccgtccgccgccgccgcc 422 ||||||||| |||||||||||||| Sbjct: 511 cttctgccggccgccgccgccgcc 534
>dbj|AK133828.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730439B14 product:E2F transcription factor 3, full insert sequence Length = 1901 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 523 cggcttcgccgccgccgccg 542
>dbj|AK164542.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330036E08 product:sno, strawberry notch homolog 1 (Drosophila), full insert sequence Length = 5298 Score = 40.1 bits (20), Expect = 5.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 395 gccgcttctgccgtccgccgccgccgcc 422 ||||||||||||| |||||||||||||| Sbjct: 43 gccgcttctgccg-ccgccgccgccgcc 69
>gb|AC161061.2| Pan troglodytes BAC clone CH251-489A6 from chromosome 7, complete sequence Length = 177652 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cttctgccgtccgccgccgccgcc 422 ||||||||| |||||||||||||| Sbjct: 37975 cttctgccggccgccgccgccgcc 37952
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 gcgccgtggagaacggccacgccc 174 |||| ||||||||||||||||||| Sbjct: 1855991 gcgcggtggagaacggccacgccc 1855968
>gb|AC177809.2| Pan troglodytes BAC clone CH251-550E5 from chromosome 7, complete sequence Length = 180443 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 cttctgccgtccgccgccgccgcc 422 ||||||||| |||||||||||||| Sbjct: 172605 cttctgccggccgccgccgccgcc 172582
>dbj|AK046562.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430011M18 product:hypothetical PX (Bem1/NCF1/PI3K) domain/ATP synthase alpha and beta subunit, central region containing protein, full insert sequence Length = 2079 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 402 ctgccgtccgccgccgccgcccac 425 |||||| ||||||||||||||||| Sbjct: 505 ctgccgcccgccgccgccgcccac 528
>emb|BX465859.13| Zebrafish DNA sequence from clone DKEYP-67G10 in linkage group 4, complete sequence Length = 214205 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 caggtgttggctggcgggcagagg 260 |||||||||| ||||||||||||| Sbjct: 171925 caggtgttggttggcgggcagagg 171948
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 cgccgcggcttcgccgccgccgcc 76 ||||||| |||||||||||||||| Sbjct: 2259468 cgccgcgacttcgccgccgccgcc 2259445
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccgatga 81 ||||||||| |||||||||||||| Sbjct: 914376 cggcttcgctgccgccgccgatga 914399
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 7936967 cggcttcgccgccgccgccg 7936948
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 19661309 cggcttcgccgccgccgccg 19661328 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 19641386 cggcttcgccgccgccgccg 19641405 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 cgccgcggcttcgccgccgccgcc 76 |||||| ||||||||||||||||| Sbjct: 6084089 cgccgccgcttcgccgccgccgcc 6084112
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tcgccgccgccgccgatgag 82 |||||||||||||||||||| Sbjct: 1994672 tcgccgccgccgccgatgag 1994653
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 97704 cggcttcgccgccgccgccg 97685
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 36810 cggcttcgccgccgccgccg 36829
>gb|DQ075069.1| Scirtothrips kenyensis isolate KE-04-003 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 1308 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ggcttcgccgccgccgccga 78 |||||||||||||||||||| Sbjct: 1169 ggcttcgccgccgccgccga 1188
>gb|DQ075068.1| Scirtothrips kenyensis isolate KE-04-001 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 1308 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ggcttcgccgccgccgccga 78 |||||||||||||||||||| Sbjct: 1169 ggcttcgccgccgccgccga 1188
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 cgtccgccgccgccgcccac 425 |||||||||||||||||||| Sbjct: 1184814 cgtccgccgccgccgcccac 1184795
>gb|AF107264.1|AF107264 Rhizobium etli glutamate synthase large subunit (gltB) and glutamate synthase small subunit (gltD) genes, complete cds Length = 7195 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 176 cccgaaggaagaggacgctccggaagtc 203 ||||||||||| ||||||| |||||||| Sbjct: 3058 cccgaaggaagtggacgcttcggaagtc 3085
>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1340_C08 Length = 192167 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 179788 cggcttcgccgccgccgccg 179807
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0433E10 Length = 144643 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 tccgccgccgccgcccaccg 427 |||||||||||||||||||| Sbjct: 36523 tccgccgccgccgcccaccg 36504
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 55 ccgcggcttcgccgccgccgccgatgag 82 ||||| ||||||||||||||||| |||| Sbjct: 54060 ccgcgccttcgccgccgccgccgctgag 54087
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 tcgccgccgccgccgatgag 82 |||||||||||||||||||| Sbjct: 87511 tcgccgccgccgccgatgag 87530
>emb|AJ585191.1| Chlamydomonas reinhardtii chloroplast mRNA for ribosomal protein S1 homologue (S1 gene) Length = 2649 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 agagcgccgcggagccgcag 239 |||||||||||||||||||| Sbjct: 1331 agagcgccgcggagccgcag 1350
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 17038 cggcttcgccgccgccgccg 17057
>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J02 Length = 151636 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 tccgccgccgccgcccaccg 427 |||||||||||||||||||| Sbjct: 77785 tccgccgccgccgcccaccg 77804
>emb|BX649514.8| Zebrafish DNA sequence from clone CH211-232P6 in linkage group 4, complete sequence Length = 152488 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 caggtgttggctggcgggcagagg 260 |||||||||| ||||||||||||| Sbjct: 89013 caggtgttggttggcgggcagagg 88990
>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012B02 Length = 149807 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 cttcgccgccgccgccgatg 80 |||||||||||||||||||| Sbjct: 72322 cttcgccgccgccgccgatg 72341
>dbj|AK173248.1| Mus musculus mRNA for mKIAA1744 protein Length = 6369 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 402 ctgccgtccgccgccgccgcccac 425 |||||| ||||||||||||||||| Sbjct: 221 ctgccgcccgccgccgccgcccac 244
>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1364A02 Length = 137933 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 87939 cggcttcgccgccgccgccg 87958
>dbj|AP005063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016I05 Length = 140933 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 gccgtccgccgccgccgccc 423 |||||||||||||||||||| Sbjct: 42838 gccgtccgccgccgccgccc 42857
>dbj|AK120898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030I02, full insert sequence Length = 2788 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 580 cggcttcgccgccgccgccg 561
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 52121 cggcttcgccgccgccgccg 52140
>dbj|AK107476.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-B09, full insert sequence Length = 696 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tcgccgccgccgccgatgag 82 |||||||||||||||||||| Sbjct: 176 tcgccgccgccgccgatgag 157
>dbj|AK107075.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-F03, full insert sequence Length = 915 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 cttcgccgccgccgccgatg 80 |||||||||||||||||||| Sbjct: 243 cttcgccgccgccgccgatg 224
>dbj|AK104188.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B03, full insert sequence Length = 1093 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tcgccgccgccgccgatgag 82 |||||||||||||||||||| Sbjct: 150 tcgccgccgccgccgatgag 131
>dbj|AK103434.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129B02, full insert sequence Length = 1325 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tcgccgccgccgccgatgag 82 |||||||||||||||||||| Sbjct: 314 tcgccgccgccgccgatgag 295
>dbj|AK100463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092A20, full insert sequence Length = 1723 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 55 ccgcggcttcgccgccgccgccgatgag 82 ||||| ||||||||||||||||| |||| Sbjct: 330 ccgcgccttcgccgccgccgccgctgag 357
>dbj|AK069019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170B15, full insert sequence Length = 1270 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 cgccgcggcttcgccgccgccgcc 76 |||||| ||||||||||||||||| Sbjct: 267 cgccgccgcttcgccgccgccgcc 244
>emb|BX649444.12| Zebrafish DNA sequence from clone DKEYP-27E10 in linkage group 4, complete sequence Length = 85097 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 caggtgttggctggcgggcagagg 260 |||||||||| ||||||||||||| Sbjct: 1946 caggtgttggttggcgggcagagg 1923
>emb|BX901962.8| Zebrafish DNA sequence from clone DKEY-153K10 in linkage group 4, complete sequence Length = 182550 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 caggtgttggctggcgggcagagg 260 |||||||||| ||||||||||||| Sbjct: 182496 caggtgttggttggcgggcagagg 182473
>dbj|AK060881.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A10, full insert sequence Length = 1093 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tcgccgccgccgccgatgag 82 |||||||||||||||||||| Sbjct: 150 tcgccgccgccgccgatgag 131
>dbj|AP003704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1048_C10 Length = 99194 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 91389 cggcttcgccgccgccgccg 91408
>emb|AL117264.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0313F03, complete sequence Length = 131195 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 cttcgccgccgccgccgatg 80 |||||||||||||||||||| Sbjct: 61634 cttcgccgccgccgccgatg 61653
>gb|AF061107.1|AF061107 Zea mays transcription factor MYC7E mRNA, partial cds Length = 2503 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 53 cgccgcggcttcgccgccgccgccgatg 80 ||||||||| ||||||||||||| |||| Sbjct: 105 cgccgcggcgtcgccgccgccgcagatg 132
>ref|NM_006735.3| Homo sapiens homeobox A2 (HOXA2), mRNA Length = 1791 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 cttctgccgtccgccgccgccgcc 422 ||||||||| |||||||||||||| Sbjct: 600 cttctgccggccgccgccgccgcc 623
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 8007054 cggcttcgccgccgccgccg 8007035
>gb|AC132123.3| Mus musculus BAC clone RP24-79F8 from 1, complete sequence Length = 214923 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 402 ctgccgtccgccgccgccgcccac 425 |||||| ||||||||||||||||| Sbjct: 19788 ctgccgcccgccgccgccgcccac 19765
>gb|BC106156.1| Mus musculus sno, strawberry notch homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:5011186), partial cds Length = 2287 Score = 40.1 bits (20), Expect = 5.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 395 gccgcttctgccgtccgccgccgccgcc 422 ||||||||||||| |||||||||||||| Sbjct: 28 gccgcttctgccg-ccgccgccgccgcc 54
>ref|NM_001949.2| Homo sapiens E2F transcription factor 3 (E2F3), mRNA Length = 4744 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cggcttcgccgccgccgccg 77 |||||||||||||||||||| Sbjct: 192 cggcttcgccgccgccgccg 211
>gb|L11243.1|RATRSKM2X Rat skeletal muscle voltage-sensitive sodium channel subtype 2 (rSkM2) gene Length = 2825 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 ccgtccgccgccgccgccca 424 |||||||||||||||||||| Sbjct: 2162 ccgtccgccgccgccgccca 2181 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,013,608 Number of Sequences: 3902068 Number of extensions: 4013608 Number of successful extensions: 360082 Number of sequences better than 10.0: 171 Number of HSP's better than 10.0 without gapping: 173 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 332522 Number of HSP's gapped (non-prelim): 27569 length of query: 430 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 408 effective length of database: 17,147,199,772 effective search space: 6996057506976 effective search space used: 6996057506976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
