ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast69c04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472749.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1194 Score = 139 bits (70), Expect = 8e-30 Identities = 195/234 (83%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 168 gtgccctacgcgctgtcggagggcgggtggctaagcctgctgctgctggccgccgtagcc 227 ||||||||||| || || ||||| || ||| | ||||| |||||| |||||||| ||| Sbjct: 70 gtgccctacgccctctccgaggggggctgggtgagcctcgcgctgctcgccgccgtggcc 129 Query: 228 gccgcctgctggtacaccggcctcctcgtcgggcgctgcatggacgccgacccggcaatc 287 |||||||||||||||||||| ||||| || | |||||||||||||||||| || ||| Sbjct: 130 gccgcctgctggtacaccgggatcctcctctgccgctgcatggacgccgacgacgccatc 189 Query: 288 cggacgtacccggacataggccggcgcgccttcgggccgc-ccggccgcctgctcgtgtc 346 ||||||||||||||||| ||| |||||| ||| |||||| | |||||||| |||||||| Sbjct: 190 cggacgtacccggacatcggcgagcgcgcgttc-ggccgcacgggccgcctcctcgtgtc 248 Query: 347 gtctttcctgtacgccgaggtgtacctcgtcgccgtcggcttcctcatcctcga 400 | ||| ||||| |||| | |||||||||||| |||||||||||||||||| Sbjct: 249 cgccttcacgtacgtcgagctctacctcgtcgccaccggcttcctcatcctcga 302
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16, complete sequence Length = 176383 Score = 139 bits (70), Expect = 8e-30 Identities = 195/234 (83%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 168 gtgccctacgcgctgtcggagggcgggtggctaagcctgctgctgctggccgccgtagcc 227 ||||||||||| || || ||||| || ||| | ||||| |||||| |||||||| ||| Sbjct: 39138 gtgccctacgccctctccgaggggggctgggtgagcctcgcgctgctcgccgccgtggcc 39197 Query: 228 gccgcctgctggtacaccggcctcctcgtcgggcgctgcatggacgccgacccggcaatc 287 |||||||||||||||||||| ||||| || | |||||||||||||||||| || ||| Sbjct: 39198 gccgcctgctggtacaccgggatcctcctctgccgctgcatggacgccgacgacgccatc 39257 Query: 288 cggacgtacccggacataggccggcgcgccttcgggccgc-ccggccgcctgctcgtgtc 346 ||||||||||||||||| ||| |||||| ||| |||||| | |||||||| |||||||| Sbjct: 39258 cggacgtacccggacatcggcgagcgcgcgttc-ggccgcacgggccgcctcctcgtgtc 39316 Query: 347 gtctttcctgtacgccgaggtgtacctcgtcgccgtcggcttcctcatcctcga 400 | ||| ||||| |||| | |||||||||||| |||||||||||||||||| Sbjct: 39317 cgccttcacgtacgtcgagctctacctcgtcgccaccggcttcctcatcctcga 39370 Score = 56.0 bits (28), Expect = 9e-05 Identities = 88/108 (81%) Strand = Plus / Plus Query: 147 tcaggtgtcggggtgctgtcggtgccctacgcgctgtcggagggcgggtggctaagcctg 206 ||||| || ||| |||||||| | || ||||| |||||||||| |||||||| |||||| Sbjct: 47364 tcaggcgttgggctgctgtcgattccgtacgccttgtcggagggagggtggctgagcctg 47423 Query: 207 ctgctgctggccgccgtagccgccgcctgctggtacaccggcctcctc 254 |||| ||| |||||| ||| | |||||| ||||||||||||||| Sbjct: 47424 gtgctcctgctcgccgtcgccatggtctgctgctacaccggcctcctc 47471 Score = 48.1 bits (24), Expect = 0.022 Identities = 57/68 (83%) Strand = Plus / Plus Query: 341 cgtgtcgtctttcctgtacgccgaggtgtacctcgtcgccgtcggcttcctcatcctcga 400 ||||||| | ||||| ||||||||| | |||||||||||| |||| ||||| || || || Sbjct: 47558 cgtgtcggcgttcctctacgccgagctctacctcgtcgccatcgggttcctgatactgga 47617 Query: 401 cggggaca 408 ||||||| Sbjct: 47618 gggggaca 47625
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 139 bits (70), Expect = 8e-30 Identities = 195/234 (83%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 168 gtgccctacgcgctgtcggagggcgggtggctaagcctgctgctgctggccgccgtagcc 227 ||||||||||| || || ||||| || ||| | ||||| |||||| |||||||| ||| Sbjct: 22944682 gtgccctacgccctctccgaggggggctgggtgagcctcgcgctgctcgccgccgtggcc 22944741 Query: 228 gccgcctgctggtacaccggcctcctcgtcgggcgctgcatggacgccgacccggcaatc 287 |||||||||||||||||||| ||||| || | |||||||||||||||||| || ||| Sbjct: 22944742 gccgcctgctggtacaccgggatcctcctctgccgctgcatggacgccgacgacgccatc 22944801 Query: 288 cggacgtacccggacataggccggcgcgccttcgggccgc-ccggccgcctgctcgtgtc 346 ||||||||||||||||| ||| |||||| ||| |||||| | |||||||| |||||||| Sbjct: 22944802 cggacgtacccggacatcggcgagcgcgcgttc-ggccgcacgggccgcctcctcgtgtc 22944860 Query: 347 gtctttcctgtacgccgaggtgtacctcgtcgccgtcggcttcctcatcctcga 400 | ||| ||||| |||| | |||||||||||| |||||||||||||||||| Sbjct: 22944861 cgccttcacgtacgtcgagctctacctcgtcgccaccggcttcctcatcctcga 22944914 Score = 56.0 bits (28), Expect = 9e-05 Identities = 88/108 (81%) Strand = Plus / Plus Query: 147 tcaggtgtcggggtgctgtcggtgccctacgcgctgtcggagggcgggtggctaagcctg 206 ||||| || ||| |||||||| | || ||||| |||||||||| |||||||| |||||| Sbjct: 22952908 tcaggcgttgggctgctgtcgattccgtacgccttgtcggagggagggtggctgagcctg 22952967 Query: 207 ctgctgctggccgccgtagccgccgcctgctggtacaccggcctcctc 254 |||| ||| |||||| ||| | |||||| ||||||||||||||| Sbjct: 22952968 gtgctcctgctcgccgtcgccatggtctgctgctacaccggcctcctc 22953015 Score = 48.1 bits (24), Expect = 0.022 Identities = 57/68 (83%) Strand = Plus / Plus Query: 341 cgtgtcgtctttcctgtacgccgaggtgtacctcgtcgccgtcggcttcctcatcctcga 400 ||||||| | ||||| ||||||||| | |||||||||||| |||| ||||| || || || Sbjct: 22953102 cgtgtcggcgttcctctacgccgagctctacctcgtcgccatcgggttcctgatactgga 22953161 Query: 401 cggggaca 408 ||||||| Sbjct: 22953162 gggggaca 22953169 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cgcgcggccggagcaggcgg 75 |||||||||||||||||||| Sbjct: 27391118 cgcgcggccggagcaggcgg 27391099
>ref|XM_472750.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1368 Score = 77.8 bits (39), Expect = 3e-11 Identities = 123/151 (81%) Strand = Plus / Plus Query: 104 cgccagcttcgtgcgaacttgcctcaacggcgtcaacgccttgtcaggtgtcggggtgct 163 ||||| ||||||||| || ||| |||| ||| ||||||| ||||||| || ||| |||| Sbjct: 201 cgccaccttcgtgcgcacctgcttcaatggcctcaacgcgctgtcaggcgttgggctgct 260 Query: 164 gtcggtgccctacgcgctgtcggagggcgggtggctaagcctgctgctgctggccgccgt 223 |||| | || ||||| |||||||||| |||||||| |||||| |||| ||| |||||| Sbjct: 261 gtcgattccgtacgccttgtcggagggagggtggctgagcctggtgctcctgctcgccgt 320 Query: 224 agccgccgcctgctggtacaccggcctcctc 254 ||| | |||||| ||||||||||||||| Sbjct: 321 cgccatggtctgctgctacaccggcctcctc 351 Score = 48.1 bits (24), Expect = 0.022 Identities = 57/68 (83%) Strand = Plus / Plus Query: 341 cgtgtcgtctttcctgtacgccgaggtgtacctcgtcgccgtcggcttcctcatcctcga 400 ||||||| | ||||| ||||||||| | |||||||||||| |||| ||||| || || || Sbjct: 438 cgtgtcggcgttcctctacgccgagctctacctcgtcgccatcgggttcctgatactgga 497 Query: 401 cggggaca 408 ||||||| Sbjct: 498 gggggaca 505
>dbj|AK106202.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-F06, full insert sequence Length = 1816 Score = 77.8 bits (39), Expect = 3e-11 Identities = 123/151 (81%) Strand = Plus / Plus Query: 104 cgccagcttcgtgcgaacttgcctcaacggcgtcaacgccttgtcaggtgtcggggtgct 163 ||||| ||||||||| || ||| |||| ||| ||||||| ||||||| || ||| |||| Sbjct: 297 cgccaccttcgtgcgcacctgcttcaatggcctcaacgcgctgtcaggcgttgggctgct 356 Query: 164 gtcggtgccctacgcgctgtcggagggcgggtggctaagcctgctgctgctggccgccgt 223 |||| | || ||||| |||||||||| |||||||| |||||| |||| ||| |||||| Sbjct: 357 gtcgattccgtacgccttgtcggagggagggtggctgagcctggtgctcctgctcgccgt 416 Query: 224 agccgccgcctgctggtacaccggcctcctc 254 ||| | |||||| ||||||||||||||| Sbjct: 417 cgccatggtctgctgctacaccggcctcctc 447 Score = 48.1 bits (24), Expect = 0.022 Identities = 57/68 (83%) Strand = Plus / Plus Query: 341 cgtgtcgtctttcctgtacgccgaggtgtacctcgtcgccgtcggcttcctcatcctcga 400 ||||||| | ||||| ||||||||| | |||||||||||| |||| ||||| || || || Sbjct: 534 cgtgtcggcgttcctctacgccgagctctacctcgtcgccatcgggttcctgatactgga 593 Query: 401 cggggaca 408 ||||||| Sbjct: 594 gggggaca 601
>ref|XM_463381.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1275 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 154 tcggggtgctgtcggtgccctacgcgctgtcggagggcgggtggctaagcctgctgct 211 ||||||||||||| |||| |||||| ||||| ||||||||||||| ||||||||||| Sbjct: 158 tcggggtgctgtccatgccgtacgcggtgtcgcagggcgggtggctcagcctgctgct 215
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 154 tcggggtgctgtcggtgccctacgcgctgtcggagggcgggtggctaagcctgctgct 211 ||||||||||||| |||| |||||| ||||| ||||||||||||| ||||||||||| Sbjct: 23443528 tcggggtgctgtccatgccgtacgcggtgtcgcagggcgggtggctcagcctgctgct 23443585 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 166 cggtgccctacgcgctgtcggagggcgggtggctaagcctgctgct 211 ||||||| |||||||| ||| ||||||||||||| |||||| |||| Sbjct: 22781744 cggtgccgtacgcgctatcgcagggcgggtggctcagcctggtgct 22781789 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 369 tacctcgtcgccgtcggcttcctcatcctcga 400 |||||||||||| || |||||||||||||||| Sbjct: 23436019 tacctcgtcgccatcagcttcctcatcctcga 23436050 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 369 tacctcgtcgccgtcggcttcctcatcctcga 400 |||||||||||| || |||||||||||||||| Sbjct: 22811649 tacctcgtcgccatcagcttcctcatcctcga 22811680 Score = 44.1 bits (22), Expect = 0.35 Identities = 40/46 (86%) Strand = Plus / Plus Query: 154 tcggggtgctgtcggtgccctacgcgctgtcggagggcgggtggct 199 ||||| |||| || ||||| |||||| ||||| ||||||||||||| Sbjct: 23435804 tcgggatgctctccgtgccgtacgcgttgtcgcagggcgggtggct 23435849
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 154 tcggggtgctgtcggtgccctacgcgctgtcggagggcgggtggctaagcctgctgct 211 ||||||||||||| |||| |||||| ||||| ||||||||||||| ||||||||||| Sbjct: 6833 tcggggtgctgtccatgccgtacgcggtgtcgcagggcgggtggctcagcctgctgct 6890
>ref|NM_192533.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 771 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 166 cggtgccctacgcgctgtcggagggcgggtggctaagcctgctgct 211 ||||||| |||||||| ||| ||||||||||||| |||||| |||| Sbjct: 8 cggtgccgtacgcgctatcgcagggcgggtggctcagcctggtgct 53
>gb|AC135927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B02, complete sequence Length = 146435 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 355 tgtacgccgaggtgtacctcgtcgccgtcggcttcctcatcctcga 400 |||||| |||| | |||||||||||| || |||||||||||||||| Sbjct: 69797 tgtacgtcgagctctacctcgtcgccatcagcttcctcatcctcga 69752
>gb|AC135928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0686B10, complete sequence Length = 159672 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 355 tgtacgccgaggtgtacctcgtcgccgtcggcttcctcatcctcga 400 |||||| |||| | |||||||||||| || |||||||||||||||| Sbjct: 121056 tgtacgtcgagctctacctcgtcgccatcagcttcctcatcctcga 121011
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 355 tgtacgccgaggtgtacctcgtcgccgtcggcttcctcatcctcga 400 |||||| |||| | |||||||||||| || |||||||||||||||| Sbjct: 17323744 tgtacgtcgagctctacctcgtcgccatcagcttcctcatcctcga 17323699 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gccgccgtagccgccgcctg 235 |||||||||||||||||||| Sbjct: 20552504 gccgccgtagccgccgcctg 20552485
>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0712E02 Length = 158084 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 166 cggtgccctacgcgctgtcggagggcgggtggctaagcctgctgct 211 ||||||| |||||||| ||| ||||||||||||| |||||| |||| Sbjct: 99133 cggtgccgtacgcgctatcgcagggcgggtggctcagcctggtgct 99178 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 369 tacctcgtcgccgtcggcttcctcatcctcga 400 |||||||||||| || |||||||||||||||| Sbjct: 129038 tacctcgtcgccatcagcttcctcatcctcga 129069
>ref|XM_463378.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1332 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 369 tacctcgtcgccgtcggcttcctcatcctcga 400 |||||||||||| || |||||||||||||||| Sbjct: 400 tacctcgtcgccatcagcttcctcatcctcga 431 Score = 44.1 bits (22), Expect = 0.35 Identities = 40/46 (86%) Strand = Plus / Plus Query: 154 tcggggtgctgtcggtgccctacgcgctgtcggagggcgggtggct 199 ||||| |||| || ||||| |||||| ||||| ||||||||||||| Sbjct: 185 tcgggatgctctccgtgccgtacgcgttgtcgcagggcgggtggct 230
>ref|NM_192538.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1383 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 369 tacctcgtcgccgtcggcttcctcatcctcga 400 |||||||||||| || |||||||||||||||| Sbjct: 466 tacctcgtcgccatcagcttcctcatcctcga 497
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 369 tacctcgtcgccgtcggcttcctcatcctcgacggggaca 408 |||||||||||| ||| |||||||||||| || ||||||| Sbjct: 6689840 tacctcgtcgccatcgacttcctcatcctggagggggaca 6689879 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 369 tacctcgtcgccgtcggcttcctcatcctcga 400 ||||| |||||| || |||||||||||||||| Sbjct: 25153128 taccttgtcgccatcagcttcctcatcctcga 25153097 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tcgtcgccgtcggcttcctc 392 |||||||||||||||||||| Sbjct: 1126582 tcgtcgccgtcggcttcctc 1126563
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 369 tacctcgtcgccgtcggcttcctcatcctcga 400 |||||||||||| || |||||||||||||||| Sbjct: 15206 tacctcgtcgccatcagcttcctcatcctcga 15237
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 369 tacctcgtcgccgtcggcttcctcatcctcga 400 |||||||||||| || |||||||||||||||| Sbjct: 161717 tacctcgtcgccatcagcttcctcatcctcga 161748 Score = 44.1 bits (22), Expect = 0.35 Identities = 40/46 (86%) Strand = Plus / Plus Query: 154 tcggggtgctgtcggtgccctacgcgctgtcggagggcgggtggct 199 ||||| |||| || ||||| |||||| ||||| ||||||||||||| Sbjct: 161502 tcgggatgctctccgtgccgtacgcgttgtcgcagggcgggtggct 161547
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0425F05 Length = 162858 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 369 tacctcgtcgccgtcggcttcctcatcctcgacggggaca 408 |||||||||||| ||| |||||||||||| || ||||||| Sbjct: 123966 tacctcgtcgccatcgacttcctcatcctggagggggaca 124005
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 369 tacctcgtcgccgtcggcttcctcatcctcgacggggaca 408 |||||||||||| ||| |||||||||||| || ||||||| Sbjct: 19519 tacctcgtcgccatcgacttcctcatcctggagggggaca 19558
>dbj|AK107472.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-B05, full insert sequence Length = 1433 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 369 tacctcgtcgccgtcggcttcctcatcctcgacggggaca 408 |||||||||||| ||| |||||||||||| || ||||||| Sbjct: 324 tacctcgtcgccatcgacttcctcatcctggagggggaca 363
>ref|NM_190212.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 810 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 216 gccgccgtagccgccgcctgctggtac 242 ||||||| ||||||||||||||||||| Sbjct: 446 gccgccgcagccgccgcctgctggtac 420
>dbj|AB200237.1| Oryza sativa (japonica cultivar-group) CRLL3 mRNA for LOB domain protein, complete cds Length = 810 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 216 gccgccgtagccgccgcctgctggtac 242 ||||||| ||||||||||||||||||| Sbjct: 446 gccgccgcagccgccgcctgctggtac 420
>dbj|AK119575.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-B04, full insert sequence Length = 1515 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 216 gccgccgtagccgccgcctgctggtac 242 ||||||| ||||||||||||||||||| Sbjct: 914 gccgccgcagccgccgcctgctggtac 888
>dbj|AK071407.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089G14, full insert sequence Length = 1464 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 216 gccgccgtagccgccgcctgctggtac 242 ||||||| ||||||||||||||||||| Sbjct: 746 gccgccgcagccgccgcctgctggtac 720
>emb|Z48624.1|HVGRP3 H.vulgare mRNA for glycine-rich RNA binding protein Length = 907 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 gctggccgccgtagccgccgcc 233 |||||||||||||||||||||| Sbjct: 354 gctggccgccgtagccgccgcc 333
>emb|AJ421798.1|SCA421798 Streptomyces cattleya thienamycin gene cluster Length = 32329 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 cgccttcgggccgcccggccgc 335 |||||||||||||||||||||| Sbjct: 7791 cgccttcgggccgcccggccgc 7812
>gb|U32310.1|TAU32310 Triticum aestivum single-stranded nucleic acid binding protein (whGRP-1) gene, complete cds Length = 937 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 gctggccgccgtagccgccgcc 233 |||||||||||||||||||||| Sbjct: 401 gctggccgccgtagccgccgcc 380 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 ctggccgccgtagccgccgcc 233 ||||||||||||||||||||| Sbjct: 469 ctggccgccgtagccgccgcc 449
>ref|NM_196701.1| Oryza sativa (japonica cultivar-group) putative serine/threonine-specific kinase like protein (OSJNBa0046P18.10), mRNA Length = 2844 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 374 cgtcgccgtcggcttcctcatcctc 398 ||||||||||||||||||| ||||| Sbjct: 942 cgtcgccgtcggcttcctcctcctc 966
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 ccgccgtagccgccgcctgct 237 ||||||||||||||||||||| Sbjct: 2901839 ccgccgtagccgccgcctgct 2901819
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 ctggccgccgtagccgccgcc 233 ||||||||||||||||||||| Sbjct: 3614811 ctggccgccgtagccgccgcc 3614831
>ref|NM_079985.2| Drosophila melanogaster bonus CG5206-RA (bon), mRNA Length = 5789 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 tggccgccgtagccgccgcctgctg 238 ||||||||| ||||||||||||||| Sbjct: 2656 tggccgccgcagccgccgcctgctg 2632
>gb|AF210315.1|AF210315 Drosophila melanogaster bonus (bon) mRNA, complete cds Length = 5811 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 tggccgccgtagccgccgcctgctg 238 ||||||||| ||||||||||||||| Sbjct: 2668 tggccgccgcagccgccgcctgctg 2644
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 374 cgtcgccgtcggcttcctcatcctc 398 ||||||||||||||||||| ||||| Sbjct: 15364571 cgtcgccgtcggcttcctcctcctc 15364595
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 ctcgtcgccgtcggcttcctc 392 ||||||||||||||||||||| Sbjct: 23284392 ctcgtcgccgtcggcttcctc 23284372 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cgcgcggccggagcaggcgg 75 |||||||||||||||||||| Sbjct: 4015155 cgcgcggccggagcaggcgg 4015174
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 374 cgtcgccgtcggcttcctcatcctc 398 ||||||||||||||||||| ||||| Sbjct: 81934 cgtcgccgtcggcttcctcctcctc 81958
>gb|AC007771.7|AC007771 Drosophila melanogaster, chromosome 3R, region 92E-92F, BAC clone BACR26M03, complete sequence Length = 197071 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 tggccgccgtagccgccgcctgctg 238 ||||||||| ||||||||||||||| Sbjct: 18466 tggccgccgcagccgccgcctgctg 18442
>gb|AC007757.5|AC007757 Drosophila melanogaster, chromosome 3R, region 92E-92F, BAC clone BACR13J19, complete sequence Length = 170939 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 tggccgccgtagccgccgcctgctg 238 ||||||||| ||||||||||||||| Sbjct: 130438 tggccgccgcagccgccgcctgctg 130414
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 ctcgtcgccgtcggcttcctc 392 ||||||||||||||||||||| Sbjct: 39650 ctcgtcgccgtcggcttcctc 39630
>dbj|AK071359.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089J23, full insert sequence Length = 2374 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 374 cgtcgccgtcggcttcctcatcctc 398 ||||||||||||||||||| ||||| Sbjct: 1063 cgtcgccgtcggcttcctcctcctc 1087
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 202 gcctgctgctgctggccgccgtagccgcc 230 |||||||||||||||||| ||| |||||| Sbjct: 774686 gcctgctgctgctggccggcgtggccgcc 774658
>gb|AE003731.3| Drosophila melanogaster chromosome 3R, section 69 of 118 of the complete sequence Length = 230001 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 tggccgccgtagccgccgcctgctg 238 ||||||||| ||||||||||||||| Sbjct: 84681 tggccgccgcagccgccgcctgctg 84657
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 374 cgtcgccgtcggcttcctcatcctc 398 ||||||||||||||||||| ||||| Sbjct: 15372812 cgtcgccgtcggcttcctcctcctc 15372836
>gb|AC122562.8| Mus musculus chromosome 5, clone RP24-103L16, complete sequence Length = 172210 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ggccgcccggccgcctgctc 341 |||||||||||||||||||| Sbjct: 55228 ggccgcccggccgcctgctc 55209
>ref|XM_475241.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1020 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gccgccgtagccgccgcctg 235 |||||||||||||||||||| Sbjct: 82 gccgccgtagccgccgcctg 101
>ref|XM_476811.1| Oryza sativa (japonica cultivar-group), mRNA Length = 351 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cgcgcggccggagcaggcgg 75 |||||||||||||||||||| Sbjct: 245 cgcgcggccggagcaggcgg 264
>ref|XM_473406.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 363 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cgcgcggccggagcaggcgg 75 |||||||||||||||||||| Sbjct: 187 cgcgcggccggagcaggcgg 168
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 ctgctgctggccgccgtagccgcc 230 ||||||||||||||||| |||||| Sbjct: 1119663 ctgctgctggccgccgttgccgcc 1119640
>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence Length = 355714 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 ctgctgctggccgccgtagccgcc 230 ||||||||||||||||| |||||| Sbjct: 345208 ctgctgctggccgccgttgccgcc 345185
>gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0086N07 map S790A, complete sequence Length = 178523 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 372 ctcgtcgccgtcggcttcctcatc 395 |||| ||||||||||||||||||| Sbjct: 100631 ctcggcgccgtcggcttcctcatc 100608
>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092E21, complete sequence Length = 132649 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gccgccgtagccgccgcctg 235 |||||||||||||||||||| Sbjct: 95983 gccgccgtagccgccgcctg 95964
>ref|NM_022365.2| Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 1 (DNAJC1), mRNA Length = 1881 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ctgctgctgctggccgccgt 223 |||||||||||||||||||| Sbjct: 213 ctgctgctgctggccgccgt 232
>ref|XR_001946.1| PREDICTED: Mus musculus hypothetical protein LOC666938 (LOC666938), mRNA Length = 2313 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ggccgcccggccgcctgctc 341 |||||||||||||||||||| Sbjct: 560 ggccgcccggccgcctgctc 541
>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence Length = 236455 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 acctcgtcgccgtcggcttc 389 |||||||||||||||||||| Sbjct: 191714 acctcgtcgccgtcggcttc 191695
>ref|XM_817176.1| Leishmania major strain Friedlin serine peptidase (LMJ_0156) partial mRNA Length = 2454 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 ctgctgctggccgccgtagccgcc 230 ||||||||||||||||| |||||| Sbjct: 258 ctgctgctggccgccgttgccgcc 235
>ref|XM_843121.1| Leishmania major strain Friedlin serine peptidase (LMJ_0520) partial mRNA Length = 2454 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 ctgctgctggccgccgtagccgcc 230 ||||||||||||||||| |||||| Sbjct: 258 ctgctgctggccgccgttgccgcc 235
>ref|XM_741688.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g01510) partial mRNA Length = 840 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 ctgctgctgctggccgccgtagcc 227 |||||||||||| ||||||||||| Sbjct: 51 ctgctgctgctgaccgccgtagcc 28
>gb|AY225122.1| Homo sapiens MTJ1-like protein mRNA, complete cds Length = 1665 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ctgctgctgctggccgccgt 223 |||||||||||||||||||| Sbjct: 106 ctgctgctgctggccgccgt 125
>gb|BC014436.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 1, mRNA (cDNA clone IMAGE:4876586), with apparent retained intron Length = 683 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ctgctgctgctggccgccgt 223 |||||||||||||||||||| Sbjct: 257 ctgctgctgctggccgccgt 276
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cgcgcggccggagcaggcgg 75 |||||||||||||||||||| Sbjct: 125714 cgcgcggccggagcaggcgg 125695
>gb|AC126071.5| Rattus norvegicus 10 BAC CH230-209B21 (Children's Hospital Oakland Research Institute) complete sequence Length = 227741 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 taagcctgctgctgctggcc 218 |||||||||||||||||||| Sbjct: 125782 taagcctgctgctgctggcc 125763
>emb|AL445431.16| Human DNA sequence from clone RP11-365J16 on chromosome 10 Contains the 5' end of the DNAJC1 gene for DnaJ (Hsp40) homolog, subfamily C, member 1 (DNAJL1) and a CpG island, complete sequence Length = 138653 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ctgctgctgctggccgccgt 223 |||||||||||||||||||| Sbjct: 96823 ctgctgctgctggccgccgt 96804
>gb|AY956411.1| Stenotrophomonas maltophilia phosphomannose isomerase/GDP-mannose pyrophosphorylase (xanB), phosphomannomutase (xanA), electron transfer flavoprotein alpha subunit (etfA), electron transfer flavoprotein beta subunit (etfB), dTDP-glucose 4,6-dehydratase (rmlB), glucose-1-phosphate thymidyltransferase (rmlA), dTDP-dehydrorhamnose 3,5-epimerase (rmlC), dTDP-4-dehydrorhamnose reductase (rmlD), and 3-oxoadipate CoA-succinyl transferase alpha subunit (ipsI) genes, complete cds Length = 12467 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gcctgctgctgctggccgcc 221 |||||||||||||||||||| Sbjct: 74 gcctgctgctgctggccgcc 93
>emb|Z23164.1|CFFARPA2A C.fasciculata CfaRPA2 gene, complete CDS Length = 1376 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 ctgctgctgctggccgccgt 223 |||||||||||||||||||| Sbjct: 473 ctgctgctgctggccgccgt 454
>gb|AY956334.1| Streptomyces aureofaciens strain CCM3239 auricin biosynthesis gene cluster, partial sequence Length = 17455 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 cctgctgctgctggccgccg 222 |||||||||||||||||||| Sbjct: 13745 cctgctgctgctggccgccg 13764
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence Length = 133967 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cgcgcggccggagcaggcgg 75 |||||||||||||||||||| Sbjct: 42272 cgcgcggccggagcaggcgg 42253
>emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in linkage group 25, complete sequence Length = 169168 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 acctcgtcgccgtcggcttc 389 |||||||||||||||||||| Sbjct: 39825 acctcgtcgccgtcggcttc 39806
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 aggccggcgcgccttcgggc 324 |||||||||||||||||||| Sbjct: 1834023 aggccggcgcgccttcgggc 1834042
>emb|CR613772.1| full-length cDNA clone CS0DI029YD10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1985 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ctgctgctgctggccgccgt 223 |||||||||||||||||||| Sbjct: 355 ctgctgctgctggccgccgt 374
>dbj|AK027263.1| Homo sapiens cDNA FLJ14357 fis, clone HEMBA1000005, highly similar to DNAJ PROTEIN HOMOLOG MTJ1 Length = 1881 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ctgctgctgctggccgccgt 223 |||||||||||||||||||| Sbjct: 213 ctgctgctgctggccgccgt 232
>gb|AF318077.1| Pseudomonas aeruginosa integron InAB1 aminoglycoside 6'-N-acetyltransferase (aacC4), metallo-beta-lactamase (blaIMP-7), and aminoglycoside 3-N-acetyltransferase (aacC1) genes, complete cds Length = 2651 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tgtcggtgccctacgcgctgtcgg 186 |||||||||||||||| ||||||| Sbjct: 444 tgtcggtgccctacgccctgtcgg 467
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 ctcgtcgccgtcggcttcctcatc 395 |||| ||||||||||||||||||| Sbjct: 13083449 ctcggcgccgtcggcttcctcatc 13083472
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 cctgctgctgctggccgccg 222 |||||||||||||||||||| Sbjct: 18220569 cctgctgctgctggccgccg 18220588
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cgcgcggccggagcaggcgg 75 |||||||||||||||||||| Sbjct: 28726167 cgcgcggccggagcaggcgg 28726148
>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase, polyketide synthase type Is, acyl transferase, membrane protein, ABC transporter, sugar dehydratase/epimerase, sugar epimerase, sugar nucleotidyltransferase, sugar dehydratase/epimerase, thioesterase, acyl CoA ligase, amine oxidase, phosphopantetheinyl transferase, transcriptional regulator, carboxylase/carboxyltransferase, amidinohydrolase, amide synthetase, 5-aminolevulinate synthase, and acyl CoA ligase genes, complete cds; and unknown gene Length = 161719 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 ccgtcggcttcctcatcctcgacg 402 ||||||||||||| |||||||||| Sbjct: 139675 ccgtcggcttcctgatcctcgacg 139652
>gb|AY205563.1| Chlamydomonas reinhardtii genomic sequence Length = 7479 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ctgctgctgctggccgccgt 223 |||||||||||||||||||| Sbjct: 1991 ctgctgctgctggccgccgt 2010
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cgcgcggccggagcaggcgg 75 |||||||||||||||||||| Sbjct: 42740 cgcgcggccggagcaggcgg 42721
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tcgtcgccgtcggcttcctc 392 |||||||||||||||||||| Sbjct: 102805 tcgtcgccgtcggcttcctc 102786
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 204 ctgctgctgctggccgccgtagccgccg 231 |||||| ||||||||||||| ||||||| Sbjct: 5344263 ctgctggtgctggccgccgtcgccgccg 5344236
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556A05 Length = 158189 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 cctgctgctgctggccgccg 222 |||||||||||||||||||| Sbjct: 69293 cctgctgctgctggccgccg 69312
>dbj|AP007205.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0048L03 Length = 142377 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 369 tacctcgtcgccgtcggcttcctcatcctcga 400 ||||| |||||| || |||||||||||||||| Sbjct: 99314 taccttgtcgccatcagcttcctcatcctcga 99283
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cgcgcggccggagcaggcgg 75 |||||||||||||||||||| Sbjct: 8013 cgcgcggccggagcaggcgg 8032
>ref|XM_310553.2| Anopheles gambiae str. PEST ENSANGP00000017316 (ENSANGG00000014827), partial mRNA Length = 2904 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 tggccgccgtagccgccgcc 233 |||||||||||||||||||| Sbjct: 1627 tggccgccgtagccgccgcc 1608
>gb|U62317.2|HUB384D8 Homo sapiens chromosome 22q13 BAC clone CIT987SK-384D8 complete sequence Length = 139934 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 agaggccgcgcggccggagc 69 |||||||||||||||||||| Sbjct: 114515 agaggccgcgcggccggagc 114496
>dbj|AK071806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111J10, full insert sequence Length = 1925 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 ctcgtcgccgtcggcttcctcatc 395 |||| ||||||||||||||||||| Sbjct: 820 ctcggcgccgtcggcttcctcatc 843
>gb|DQ306260.1| Rhodococcus sp. T104 p-cumate-degrading gene cluster, complete sequence Length = 42397 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tggccgccgtagccgccgcc 233 |||||||||||||||||||| Sbjct: 16293 tggccgccgtagccgccgcc 16312
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 ctcgtcgccgtcggcttcctcatc 395 |||| ||||||||||||||||||| Sbjct: 13163628 ctcggcgccgtcggcttcctcatc 13163651
>gb|BC110894.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 1, mRNA (cDNA clone MGC:131954 IMAGE:5164559), complete cds Length = 2213 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ctgctgctgctggccgccgt 223 |||||||||||||||||||| Sbjct: 393 ctgctgctgctggccgccgt 412
>gb|M58602.1|HUMPDGFAA Human platelet-derived endothelial cell growth factor gene, exons 1 through 10 Length = 5845 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 agaggccgcgcggccggagc 69 |||||||||||||||||||| Sbjct: 5516 agaggccgcgcggccggagc 5497
>dbj|AB053455.1| Burkholderia glumae gene for putative HrpO, complete cds Length = 2920 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 ccggcctcctcgtcgggcgc 263 |||||||||||||||||||| Sbjct: 2728 ccggcctcctcgtcgggcgc 2709 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,772,759 Number of Sequences: 3902068 Number of extensions: 2772759 Number of successful extensions: 63354 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62059 Number of HSP's gapped (non-prelim): 1292 length of query: 408 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 386 effective length of database: 17,147,199,772 effective search space: 6618819111992 effective search space used: 6618819111992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
