ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast69b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK099587.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 5e-68
2gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic seque... 109 7e-21
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 109 7e-21
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 109 7e-21
5gb|BT013361.1| Lycopersicon esculentum clone 135354R, mRNA sequence 92 2e-15
6ref|NM_106556.1| Arabidopsis thaliana ATP binding / DNA binding ... 82 2e-12
7gb|AY113960.1| Arabidopsis thaliana putative replicase (At1g7905... 82 2e-12
8gb|AY050885.1| Arabidopsis thaliana putative replicase (At1g7905... 82 2e-12
9emb|BX813935.1|CNS0ADWA Arabidopsis thaliana Full-length cDNA Co... 82 2e-12
10emb|BX814982.1|CNS0ACWR Arabidopsis thaliana Full-length cDNA Co... 82 2e-12
11gb|M98039.1|ATHRECAHOM Arabidopsis thaliana recA homolog protein... 82 2e-12
12emb|BX815277.1|CNS0ACXW Arabidopsis thaliana Full-length cDNA Co... 68 2e-08
13gb|AC002986.1|YUP8H12R Arabidopsis thaliana chromosome 1 YAC YUP... 64 4e-07
14gb|L15229.1|ATHRECA Arabidopsis thaliana nuclear-encoded chlorop... 64 4e-07
15gb|AC023712.5| Drosophila melanogaster X BAC RP98-1M22 (Roswell ... 46 0.090
16gb|AC023692.5| Drosophila melanogaster X BAC RP98-15B10 (Roswell... 46 0.090
17ref|NM_131980.1| Drosophila melanogaster CG15464-RA (CG15464), mRNA 46 0.090
18gb|AE003433.3| Drosophila melanogaster chromosome X, section 17 ... 46 0.090
19gb|AC121870.2| Mus musculus chromosome 9 clone RP24-121D5, compl... 44 0.36
20gb|AY351388.1| Mus musculus nectin-like molecule 2 mRNA, complet... 44 0.36
21gb|AF434663.1| Mus musculus tumor suprressor in lung cancer 1 mR... 44 0.36
22gb|DQ279856.1| Rattus norvegicus nectin-like 2 mRNA, partial cds 44 0.36
23gb|BC095986.1| Mus musculus immunoglobulin superfamily, member 4... 44 0.36
24ref|NM_001025600.1| Mus musculus immunoglobulin superfamily, mem... 44 0.36
25ref|NM_018770.3| Mus musculus immunoglobulin superfamily, member... 44 0.36
26ref|NM_207675.2| Mus musculus immunoglobulin superfamily, member... 44 0.36
27ref|NM_207676.2| Mus musculus immunoglobulin superfamily, member... 44 0.36
28dbj|AK172628.1| Mus musculus activated spleen cDNA, RIKEN full-l... 44 0.36
29dbj|AK013775.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 44 0.36
30dbj|AK053839.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 44 0.36
31gb|BC069937.1| Mus musculus immunoglobulin superfamily, member 4... 44 0.36
32ref|XM_576404.1| PREDICTED: Rattus norvegicus immunoglobulin sup... 44 0.36
33dbj|AB183402.1| Mus musculus RA175 mRNA for RA175 isoform e, com... 44 0.36
34dbj|AB183401.1| Mus musculus RA175 mRNA for RA175 isoform d, com... 44 0.36
35dbj|AB183400.1| Mus musculus RA175 mRNA for RA175 isoform b, com... 44 0.36
36dbj|AB183399.1| Mus musculus RA175 mRNA for RA175 isoform c, com... 44 0.36
37dbj|AB114443.1| Rattus norvegicus sgigsf mRNA for spermatogenic ... 44 0.36
38gb|BC057125.1| Mus musculus immunoglobulin superfamily, member 4... 44 0.36
39dbj|AB064265.2| Mus musculus mRNA for RA175, complete cds 44 0.36
40dbj|AB092414.1| Mus musculus mRNA for a secretion form of SgIGSF... 44 0.36
41gb|BC078966.1| Rattus norvegicus immunoglobulin superfamily, mem... 44 0.36
42gb|AF539424.1| Mus musculus synaptic cell adhesion molecule 1 mR... 44 0.36
43ref|NM_001012201.1| Rattus norvegicus immunoglobulin superfamily... 44 0.36
44gb|BC090970.1| Mus musculus immunoglobulin superfamily, member 4... 44 0.36
45dbj|AB052293.1| Mus musculus sgigsf mRNA for spermatogenic immun... 44 0.36
46gb|AC011072.9| Drosophila melanogaster clone BACR48A20, complete... 42 1.4
47gb|AC116324.6| Mus musculus BAC clone RP23-282P1 from 16, comple... 42 1.4
48emb|AL157821.14| Human DNA sequence from clone RP11-93M14 on chr... 42 1.4
49emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.4
50gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 42 1.4
51ref|NM_166289.1| Drosophila melanogaster scruin like at the midl... 42 1.4
52ref|NM_079058.2| Drosophila melanogaster scruin like at the midl... 42 1.4
53gb|AY058460.1| Drosophila melanogaster GH26048 full length cDNA 42 1.4
54gb|AF239722.1|AF239722 Drosophila melanogaster Slim (slim) mRNA,... 42 1.4
55gb|BT003216.1| Drosophila melanogaster RE08517 full insert cDNA 42 1.4
56gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.4
57gb|AE003799.4| Drosophila melanogaster chromosome 2R, section 51... 42 1.4
58gb|AC136147.4| Mus musculus BAC clone RP23-18B3 from 8, complete... 42 1.4
59gb|L39063.1|HUMIL9RPS Homo sapiens interleukin 9 receptor (IL9R)... 42 1.4
60ref|NM_183484.2| Oryza sativa (japonica cultivar-group), mRNA 40 5.6
61gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome 40 5.6
62gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
63gb|AC149084.5| Mus musculus BAC clone RP23-173A12 from chromosom... 40 5.6
64gb|AC159228.2| Mus musculus BAC clone RP24-338I14 from chromosom... 40 5.6
65gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
66gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 5.6
67gb|AC145549.3| Mus musculus BAC clone RP23-21M23 from chromosome... 40 5.6
68gb|AC132957.3| Mus musculus BAC clone RP23-149E9 from chromosome... 40 5.6
69emb|AL445072.17| Human DNA sequence from clone RP11-13E5 on chro... 40 5.6
70emb|AL136379.19| Human DNA sequence from clone RP5-881P19 on chr... 40 5.6
71gb|AF169829.1| Mus musculus glycoprotein IIb (GPalpha IIb) gene,... 40 5.6
72gb|AE006462.1| Homo sapiens 16p13.3 sequence section 1 of 8 40 5.6
73emb|BX571773.12| Zebrafish DNA sequence from clone DKEY-174K1 in... 40 5.6
74gb|AC008742.9| Homo sapiens chromosome 19 clone CTD-2553C6, comp... 40 5.6
75gb|AC104462.1| Homo sapiens chromosome 1 clone RP11-522M21, comp... 40 5.6
76gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.6
77tpg|BK001428.1| TPA: TPA_exp: Homo sapiens NOELIN2_V1 (OLFM2) ge... 40 5.6
78dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
79dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
80dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
81dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
82gb|AC007218.6| Homo sapiens chromosome 16 clone RP11-297M9, comp... 40 5.6
83dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
84dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
85dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
86dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
87dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
88dbj|AK120739.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
89dbj|AK119550.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
90dbj|AK104735.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
91dbj|AK104669.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
92dbj|AK104238.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
93dbj|AK104189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
94dbj|AK098946.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
95dbj|AK061325.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
96gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
97emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.6
98emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb... 40 5.6
99gb|AC173481.1| Mus musculus BAC clone RP23-411A24 from chromosom... 40 5.6
100gb|L39062.1|HUMIL9R Homo sapiens interleukin 9 receptor IL9R pse... 40 5.6
101emb|AL596258.15| Mouse DNA sequence from clone RP23-226P4 on chr... 40 5.6
102emb|Z84723.1|HSLAW2 Human DNA sequence from phage LAW2 from a co... 40 5.6 
>dbj|AK099587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043C07, full
           insert sequence
          Length = 1551

 Score =  266 bits (134), Expect = 5e-68
 Identities = 206/230 (89%)
 Strand = Plus / Plus

                                                                       
Query: 186 gccgccggctgcgctgcgagttcgttgccagcgtcgggaacggcgcgctctccggcgagg 245
           ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||
Sbjct: 172 gccgccggctgcgctgcgagttcgtggccggcggcgggaacggcgcgctctccggggagg 231

                                                                       
Query: 246 acgaccctcgactgatagaccgccaaaaagctcttgatgcagcaatgactgacataaaca 305
           ||||||| || || ||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 232 acgacccgcgcctcatagaccgccaaaaagctcttgatgcagccatgaatgacataaaca 291

                                                                       
Query: 306 attcttttggaaaaggaagcgttacaagattagggagtgctggtggtgcttttgttgaga 365
             || ||||||||||| || |||||||||||||| || || |||||||| ||||||||||
Sbjct: 292 gctcctttggaaaaggcagtgttacaagattaggaagcgcgggtggtgcctttgttgaga 351

                                                             
Query: 366 cttttccgagtggttgcttaacactagattttgctttgggcggtggcctt 415
           | ||||| ||||| ||||| |||||||||||||| ||||| |||||||||
Sbjct: 352 catttccaagtggctgcttgacactagattttgccttgggtggtggcctt 401
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>gb|AC147427.2| Oryza sativa chromosome 3  B1394A07 genomic sequence, complete sequence
          Length = 175704

 Score =  109 bits (55), Expect = 7e-21
 Identities = 76/83 (91%)
 Strand = Plus / Minus

                                                                          
Query: 186    gccgccggctgcgctgcgagttcgttgccagcgtcgggaacggcgcgctctccggcgagg 245
              ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||
Sbjct: 156827 gccgccggctgcgctgcgagttcgtggccggcggcgggaacggcgcgctctccggggagg 156768

                                     
Query: 246    acgaccctcgactgatagaccgc 268
              ||||||| || || |||||||||
Sbjct: 156767 acgacccgcgcctcatagaccgc 156745



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                          
Query: 269    caaaaagctcttgatgcagcaatgactgacataaacaattcttttggaaaaggaagcgtt 328
              |||||||||||||||||||| |||| |||||||||||  || ||||||||||| || |||
Sbjct: 155903 caaaaagctcttgatgcagccatgaatgacataaacagctcctttggaaaaggcagtgtt 155844

                                              
Query: 329    acaagattagggagtgctggtggtgcttttgt 360
              ||||||||||| || || |||||||| |||||
Sbjct: 155843 acaagattaggaagcgcgggtggtgcctttgt 155812



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                     
Query: 361    tgagacttttccgagtggttgcttaacactagattttgctttgggcggtggcctt 415
              |||||| ||||| ||||| ||||| |||||||||||||| ||||| |||||||||
Sbjct: 155719 tgagacatttccaagtggctgcttgacactagattttgccttgggtggtggcctt 155665
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  109 bits (55), Expect = 7e-21
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                            
Query: 186      gccgccggctgcgctgcgagttcgttgccagcgtcgggaacggcgcgctctccggcgagg 245
                ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||
Sbjct: 24479033 gccgccggctgcgctgcgagttcgtggccggcggcgggaacggcgcgctctccggggagg 24479092

                                       
Query: 246      acgaccctcgactgatagaccgc 268
                ||||||| || || |||||||||
Sbjct: 24479093 acgacccgcgcctcatagaccgc 24479115



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                            
Query: 269      caaaaagctcttgatgcagcaatgactgacataaacaattcttttggaaaaggaagcgtt 328
                |||||||||||||||||||| |||| |||||||||||  || ||||||||||| || |||
Sbjct: 24479957 caaaaagctcttgatgcagccatgaatgacataaacagctcctttggaaaaggcagtgtt 24480016

                                                
Query: 329      acaagattagggagtgctggtggtgcttttgt 360
                ||||||||||| || || |||||||| |||||
Sbjct: 24480017 acaagattaggaagcgcgggtggtgcctttgt 24480048



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                       
Query: 361      tgagacttttccgagtggttgcttaacactagattttgctttgggcggtggcctt 415
                |||||| ||||| ||||| ||||| |||||||||||||| ||||| |||||||||
Sbjct: 24480141 tgagacatttccaagtggctgcttgacactagattttgccttgggtggtggcctt 24480195
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  109 bits (55), Expect = 7e-21
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                            
Query: 186      gccgccggctgcgctgcgagttcgttgccagcgtcgggaacggcgcgctctccggcgagg 245
                ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||
Sbjct: 24396502 gccgccggctgcgctgcgagttcgtggccggcggcgggaacggcgcgctctccggggagg 24396561

                                       
Query: 246      acgaccctcgactgatagaccgc 268
                ||||||| || || |||||||||
Sbjct: 24396562 acgacccgcgcctcatagaccgc 24396584



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                            
Query: 269      caaaaagctcttgatgcagcaatgactgacataaacaattcttttggaaaaggaagcgtt 328
                |||||||||||||||||||| |||| |||||||||||  || ||||||||||| || |||
Sbjct: 24397426 caaaaagctcttgatgcagccatgaatgacataaacagctcctttggaaaaggcagtgtt 24397485

                                                
Query: 329      acaagattagggagtgctggtggtgcttttgt 360
                ||||||||||| || || |||||||| |||||
Sbjct: 24397486 acaagattaggaagcgcgggtggtgcctttgt 24397517



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                       
Query: 361      tgagacttttccgagtggttgcttaacactagattttgctttgggcggtggcctt 415
                |||||| ||||| ||||| ||||| |||||||||||||| ||||| |||||||||
Sbjct: 24397610 tgagacatttccaagtggctgcttgacactagattttgccttgggtggtggcctt 24397664
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>gb|BT013361.1| Lycopersicon esculentum clone 135354R, mRNA sequence
          Length = 1836

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 124/150 (82%)
 Strand = Plus / Plus

                                                                       
Query: 263 gaccgccaaaaagctcttgatgcagcaatgactgacataaacaattcttttggaaaagga 322
           ||||| ||||||||  | ||||| |||||||  || |||||||  || ||||| ||||||
Sbjct: 325 gaccggcaaaaagcattggatgctgcaatgaacgatataaacagctcgtttggcaaagga 384

                                                                       
Query: 323 agcgttacaagattagggagtgctggtggtgcttttgttgagacttttccgagtggttgc 382
           |||||||| ||||| || |||||||| || ||| | ||||| |||||||||||||| |||
Sbjct: 385 agcgttactagattgggtagtgctggcggagctctggttgaaacttttccgagtggctgc 444

                                         
Query: 383 ttaacactagattttgctttgggcggtggc 412
           || || ||||| |||||||| || ||||||
Sbjct: 445 ttgacgctagactttgctttaggtggtggc 474
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>ref|NM_106556.1| Arabidopsis thaliana ATP binding / DNA binding / DNA-dependent
           ATPase/ nucleoside-triphosphatase/ nucleotide binding
           AT1G79050 mRNA, complete cds
          Length = 1459

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Plus

                                                                       
Query: 263 gaccgccaaaaagctcttgatgcagcaatgactgacataaacaattcttttggaaaagga 322
           ||||||||||| ||| | || ||||| |||| |||||| |||| ||| ||||| ||||||
Sbjct: 260 gaccgccaaaaggctttagaggcagctatgaatgacattaacagttcatttggtaaagga 319

                                                                    
Query: 323 agcgttacaagattagggagtgctggtggtgcttttgttgagacttttccgagtggt 379
           || || |||||||| |||||||||||||| || || || ||||| ||| ||||||||
Sbjct: 320 agtgtaacaagattggggagtgctggtggagcattagtggagaccttttcgagtggt 376
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>gb|AY113960.1| Arabidopsis thaliana putative replicase (At1g79050) mRNA, complete
           cds
          Length = 1351

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Plus

                                                                       
Query: 263 gaccgccaaaaagctcttgatgcagcaatgactgacataaacaattcttttggaaaagga 322
           ||||||||||| ||| | || ||||| |||| |||||| |||| ||| ||||| ||||||
Sbjct: 244 gaccgccaaaaggctttagaggcagctatgaatgacattaacagttcatttggtaaagga 303

                                                                    
Query: 323 agcgttacaagattagggagtgctggtggtgcttttgttgagacttttccgagtggt 379
           || || |||||||| |||||||||||||| || || || ||||| ||| ||||||||
Sbjct: 304 agtgtaacaagattggggagtgctggtggagcattagtggagaccttttcgagtggt 360
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>gb|AY050885.1| Arabidopsis thaliana putative replicase (At1g79050) mRNA, complete
           cds
          Length = 1475

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Plus

                                                                       
Query: 263 gaccgccaaaaagctcttgatgcagcaatgactgacataaacaattcttttggaaaagga 322
           ||||||||||| ||| | || ||||| |||| |||||| |||| ||| ||||| ||||||
Sbjct: 260 gaccgccaaaaggctttagaggcagctatgaatgacattaacagttcatttggtaaagga 319

                                                                    
Query: 323 agcgttacaagattagggagtgctggtggtgcttttgttgagacttttccgagtggt 379
           || || |||||||| |||||||||||||| || || || ||||| ||| ||||||||
Sbjct: 320 agtgtaacaagattggggagtgctggtggagcattagtggagaccttttcgagtggt 376
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>emb|BX813935.1|CNS0ADWA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB49ZA01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1377

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Plus

                                                                       
Query: 263 gaccgccaaaaagctcttgatgcagcaatgactgacataaacaattcttttggaaaagga 322
           ||||||||||| ||| | || ||||| |||| |||||| |||| ||| ||||| ||||||
Sbjct: 243 gaccgccaaaaggctttagaggcagctatgaatgacattaacagttcatttggtaaagga 302

                                                                    
Query: 323 agcgttacaagattagggagtgctggtggtgcttttgttgagacttttccgagtggt 379
           || || |||||||| |||||||||||||| || || || ||||| ||| ||||||||
Sbjct: 303 agtgtaacaagattggggagtgctggtggagcattagtggagaccttttcgagtggt 359
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>emb|BX814982.1|CNS0ACWR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS21ZF07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1453

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Plus

                                                                       
Query: 263 gaccgccaaaaagctcttgatgcagcaatgactgacataaacaattcttttggaaaagga 322
           ||||||||||| ||| | || ||||| |||| |||||| |||| ||| ||||| ||||||
Sbjct: 255 gaccgccaaaaggctttagaggcagctatgaatgacattaacagttcatttggtaaagga 314

                                                                    
Query: 323 agcgttacaagattagggagtgctggtggtgcttttgttgagacttttccgagtggt 379
           || || |||||||| |||||||||||||| || || || ||||| ||| ||||||||
Sbjct: 315 agtgtaacaagattggggagtgctggtggagcattagtggagaccttttcgagtggt 371
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>gb|M98039.1|ATHRECAHOM Arabidopsis thaliana recA homolog protein mRNA, 3' end
          Length = 1404

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Plus

                                                                       
Query: 263 gaccgccaaaaagctcttgatgcagcaatgactgacataaacaattcttttggaaaagga 322
           ||||||||||| ||| | || ||||| |||| |||||| |||| ||| ||||| ||||||
Sbjct: 242 gaccgccaaaaggctttagaggcagctatgaatgacattaacagttcatttggtaaagga 301

                                                                    
Query: 323 agcgttacaagattagggagtgctggtggtgcttttgttgagacttttccgagtggt 379
           || || |||||||| |||||||||||||| || || || ||||| ||| ||||||||
Sbjct: 302 agtgtaacaagattggggagtgctggtggagcattagtggagaccttttcgagtggt 358
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>emb|BX815277.1|CNS0ACXW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS49ZB01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1405

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 98/118 (83%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                       
Query: 263 gaccgccaaaaagctcttgatgcagcaatgactgacataaacaattcttttggaaaagga 322
           ||||||||||| ||| | || ||||| |||| |||||| |||| ||| ||||| ||||||
Sbjct: 252 gaccgccaaaaggctttagaggcagctatgaatgacattaacagttcatttggtaaagga 311

                                                                     
Query: 323 agcgttac-aagattagggagtgctggtggtgcttttgttgagacttttccgagtggt 379
           || || || |||||| |||||||||||||| || || || ||||| ||| ||||||||
Sbjct: 312 agtgtaacgaagattggggagtgctggtggagcattagtggagaccttttcgagtggt 369
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>gb|AC002986.1|YUP8H12R Arabidopsis thaliana chromosome 1 YAC YUP8H12R sequence, complete
              sequence
          Length = 181925

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                          
Query: 284    gcagcaatgactgacataaacaattcttttggaaaaggaagcgttacaagattagggagt 343
              ||||| |||| |||||| |||| ||| ||||| |||||||| || |||||||| ||||||
Sbjct: 120254 gcagctatgaatgacattaacagttcatttggtaaaggaagtgtaacaagattggggagt 120313

                      
Query: 344    gctggtgg 351
              ||||||||
Sbjct: 120314 gctggtgg 120321
to top
>gb|L15229.1|ATHRECA Arabidopsis thaliana nuclear-encoded chloroplast DNA repair protein
            (homologue of E.coli recA) gene, complete cds
          Length = 3853

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                        
Query: 284  gcagcaatgactgacataaacaattcttttggaaaaggaagcgttacaagattagggagt 343
            ||||| |||| |||||| |||| ||| ||||| |||||||| || |||||||| ||||||
Sbjct: 1279 gcagctatgaatgacattaacagttcatttggtaaaggaagtgtaacaagattggggagt 1338

                    
Query: 344  gctggtgg 351
            ||||||||
Sbjct: 1339 gctggtgg 1346
to top
>gb|AC023712.5| Drosophila melanogaster X BAC RP98-1M22 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 170129

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 78   tggccacagccgctgccgccgca 100
            |||||||||||||||||||||||
Sbjct: 6822 tggccacagccgctgccgccgca 6844
to top
>gb|AC023692.5| Drosophila melanogaster X BAC RP98-15B10 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 163090

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 78    tggccacagccgctgccgccgca 100
             |||||||||||||||||||||||
Sbjct: 44127 tggccacagccgctgccgccgca 44105
to top
>ref|NM_131980.1| Drosophila melanogaster CG15464-RA (CG15464), mRNA
          Length = 321

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 78  tggccacagccgctgccgccgca 100
           |||||||||||||||||||||||
Sbjct: 65  tggccacagccgctgccgccgca 87
to top
>gb|AE003433.3| Drosophila melanogaster chromosome X, section 17 of 74 of the complete
              sequence
          Length = 303602

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 78     tggccacagccgctgccgccgca 100
              |||||||||||||||||||||||
Sbjct: 167523 tggccacagccgctgccgccgca 167545
to top
>gb|AC121870.2| Mus musculus chromosome 9 clone RP24-121D5, complete sequence
          Length = 191747

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 80     gccacagccgctgccgccgcac 101
              ||||||||||||||||||||||
Sbjct: 162405 gccacagccgctgccgccgcac 162384
to top
>gb|AY351388.1| Mus musculus nectin-like molecule 2 mRNA, complete cds;
           alternatively spliced
          Length = 1254

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 56  gccacagccgctgccgccgcac 35
to top
>gb|AF434663.1| Mus musculus tumor suprressor in lung cancer 1 mRNA, complete cds
          Length = 4444

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 172 gccacagccgctgccgccgcac 151
to top
>gb|DQ279856.1| Rattus norvegicus nectin-like 2 mRNA, partial cds
          Length = 1284

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 56  gccacagccgctgccgccgcac 35
to top
>gb|BC095986.1| Mus musculus immunoglobulin superfamily, member 4A, transcript
           variant 3, mRNA (cDNA clone MGC:106033 IMAGE:5372277),
           complete cds
          Length = 2030

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 69  gccacagccgctgccgccgcac 48
to top
>ref|NM_001025600.1| Mus musculus immunoglobulin superfamily, member 4A (Igsf4a),
           transcript variant 4, mRNA
          Length = 4270

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 77  gccacagccgctgccgccgcac 56
to top
>ref|NM_018770.3| Mus musculus immunoglobulin superfamily, member 4A (Igsf4a),
           transcript variant 3, mRNA
          Length = 4354

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 77  gccacagccgctgccgccgcac 56
to top
>ref|NM_207675.2| Mus musculus immunoglobulin superfamily, member 4A (Igsf4a),
           transcript variant 1, mRNA
          Length = 4387

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 77  gccacagccgctgccgccgcac 56
to top
>ref|NM_207676.2| Mus musculus immunoglobulin superfamily, member 4A (Igsf4a),
           transcript variant 2, mRNA
          Length = 4303

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 77  gccacagccgctgccgccgcac 56
to top
>dbj|AK172628.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830221K06 product:immunoglobulin
           superfamily, member 4A, full insert sequence
          Length = 4790

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 78  gccacagccgctgccgccgcac 57
to top
>dbj|AK013775.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length
           enriched library, clone:2900073G06
           product:immunoglobulin superfamily, member 4A, full
           insert sequence
          Length = 1118

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 78  gccacagccgctgccgccgcac 57
to top
>dbj|AK053839.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
           library, clone:E130314H03 product:immunoglobulin
           superfamily, member 4, full insert sequence
          Length = 1372

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 78  gccacagccgctgccgccgcac 57
to top
>gb|BC069937.1| Mus musculus immunoglobulin superfamily, member 4A, mRNA (cDNA
           clone IMAGE:5008124)
          Length = 948

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 66  gccacagccgctgccgccgcac 45
to top
>ref|XM_576404.1| PREDICTED: Rattus norvegicus immunoglobulin superfamily, member 4A
           (predicted) (Igsf4a_predicted), mRNA
          Length = 1777

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 219 gccacagccgctgccgccgcac 198
to top
>dbj|AB183402.1| Mus musculus RA175 mRNA for RA175 isoform e, complete cds
          Length = 1011

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 56  gccacagccgctgccgccgcac 35
to top
>dbj|AB183401.1| Mus musculus RA175 mRNA for RA175 isoform d, complete cds
          Length = 1254

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 56  gccacagccgctgccgccgcac 35
to top
>dbj|AB183400.1| Mus musculus RA175 mRNA for RA175 isoform b, complete cds
          Length = 1287

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 56  gccacagccgctgccgccgcac 35
to top
>dbj|AB183399.1| Mus musculus RA175 mRNA for RA175 isoform c, complete cds
          Length = 1338

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 56  gccacagccgctgccgccgcac 35
to top
>dbj|AB114443.1| Rattus norvegicus sgigsf mRNA for spermatogenic immunoglobulin
           superfamily, complete cds
          Length = 1954

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 108 gccacagccgctgccgccgcac 87
to top
>gb|BC057125.1| Mus musculus immunoglobulin superfamily, member 4A, transcript
           variant 2, mRNA (cDNA clone MGC:73503 IMAGE:6414884),
           complete cds
          Length = 1958

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 65  gccacagccgctgccgccgcac 44
to top
>dbj|AB064265.2| Mus musculus mRNA for RA175, complete cds
          Length = 1450

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 56  gccacagccgctgccgccgcac 35
to top
>dbj|AB092414.1| Mus musculus mRNA for a secretion form of SgIGSF/TSLC1, complete
           cds
          Length = 1112

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 56  gccacagccgctgccgccgcac 35
to top
>gb|BC078966.1| Rattus norvegicus immunoglobulin superfamily, member 4A, mRNA (cDNA
           clone MGC:93845 IMAGE:7111523), complete cds
          Length = 1801

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 219 gccacagccgctgccgccgcac 198
to top
>gb|AF539424.1| Mus musculus synaptic cell adhesion molecule 1 mRNA, complete cds
          Length = 1817

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 69  gccacagccgctgccgccgcac 48
to top
>ref|NM_001012201.1| Rattus norvegicus immunoglobulin superfamily, member 4A (Igsf4a),
           mRNA
          Length = 1801

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 219 gccacagccgctgccgccgcac 198
to top
>gb|BC090970.1| Mus musculus immunoglobulin superfamily, member 4A, mRNA (cDNA
           clone MGC:107101 IMAGE:6703838), complete cds
          Length = 1796

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 256 gccacagccgctgccgccgcac 235
to top
>dbj|AB052293.1| Mus musculus sgigsf mRNA for spermatogenic immunoglobulin
           superfamily protein, complete cds
          Length = 2024

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 80  gccacagccgctgccgccgcac 101
           ||||||||||||||||||||||
Sbjct: 77  gccacagccgctgccgccgcac 56
to top
>gb|AC011072.9| Drosophila melanogaster clone BACR48A20, complete sequence
          Length = 166178

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 111    ccgccatcctgccccgccccc 131
              |||||||||||||||||||||
Sbjct: 127638 ccgccatcctgccccgccccc 127658
to top
>gb|AC116324.6| Mus musculus BAC clone RP23-282P1 from 16, complete sequence
          Length = 200774

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 109    ccccgccatcctgccccgcccccgc 133
              ||||||| |||||||||||||||||
Sbjct: 132491 ccccgccctcctgccccgcccccgc 132467
to top
>emb|AL157821.14| Human DNA sequence from clone RP11-93M14 on chromosome 13 Contains part
              of the GPC5 gene for glypican 5, complete sequence
          Length = 138781

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 295    tgacataaacaattcttttggaaaa 319
              |||||||||||||| ||||||||||
Sbjct: 132642 tgacataaacaattgttttggaaaa 132618
to top
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16
          Length = 349635

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 162   cgagcagcgcctccggacgcggcagccgc 190
             |||||||||||||| ||||| ||||||||
Sbjct: 89508 cgagcagcgcctccagacgctgcagccgc 89480
to top
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 109     ccccgccatcctgccccgcccccgcagga 137
               |||||||| || |||||||||||||||||
Sbjct: 2077696 ccccgccagcccgccccgcccccgcagga 2077668
to top
>ref|NM_166289.1| Drosophila melanogaster scruin like at the midline CG5186-RB,
            transcript variant B (slim), mRNA
          Length = 2955

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 111  ccgccatcctgccccgccccc 131
            |||||||||||||||||||||
Sbjct: 1849 ccgccatcctgccccgccccc 1869
to top
>ref|NM_079058.2| Drosophila melanogaster scruin like at the midline CG5186-RA,
            transcript variant A (slim), mRNA
          Length = 3095

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 111  ccgccatcctgccccgccccc 131
            |||||||||||||||||||||
Sbjct: 1989 ccgccatcctgccccgccccc 2009
to top
>gb|AY058460.1| Drosophila melanogaster GH26048 full length cDNA
          Length = 2194

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 111  ccgccatcctgccccgccccc 131
            |||||||||||||||||||||
Sbjct: 1065 ccgccatcctgccccgccccc 1085
to top
>gb|AF239722.1|AF239722 Drosophila melanogaster Slim (slim) mRNA, complete cds
          Length = 3034

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 111  ccgccatcctgccccgccccc 131
            |||||||||||||||||||||
Sbjct: 1899 ccgccatcctgccccgccccc 1919
to top
>gb|BT003216.1| Drosophila melanogaster RE08517 full insert cDNA
          Length = 3105

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 111  ccgccatcctgccccgccccc 131
            |||||||||||||||||||||
Sbjct: 1989 ccgccatcctgccccgccccc 2009
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 110     cccgccatcctgccccgcccccgca 134
               ||||||||||||| |||||||||||
Sbjct: 4567373 cccgccatcctgcgccgcccccgca 4567349
to top
>gb|AE003799.4| Drosophila melanogaster chromosome 2R, section 51 of 73 of the complete
              sequence
          Length = 316981

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 111    ccgccatcctgccccgccccc 131
              |||||||||||||||||||||
Sbjct: 132017 ccgccatcctgccccgccccc 132037
to top
>gb|AC136147.4| Mus musculus BAC clone RP23-18B3 from 8, complete sequence
          Length = 210916

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 115   catcctgccccgcccccgcag 135
             |||||||||||||||||||||
Sbjct: 39032 catcctgccccgcccccgcag 39052
to top
>gb|L39063.1|HUMIL9RPS Homo sapiens interleukin 9 receptor (IL9R) pseudogene, exons 1-9
          Length = 10550

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     cccttcactccaccccataca 29
             |||||||||||||||||||||
Sbjct: 10503 cccttcactccaccccataca 10483
to top
>ref|NM_183484.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1256

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 171 cctccggacgcggcagccgccggc 194
           |||||||||||||| |||||||||
Sbjct: 410 cctccggacgcggccgccgccggc 387
to top
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 267     gccaaaaagctcttgatgca 286
               ||||||||||||||||||||
Sbjct: 1074440 gccaaaaagctcttgatgca 1074459
to top
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04,
            complete sequence
          Length = 88553

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 80   gccacagccgctgccgccgc 99
            ||||||||||||||||||||
Sbjct: 7573 gccacagccgctgccgccgc 7592
to top
>gb|AC149084.5| Mus musculus BAC clone RP23-173A12 from chromosome 19, complete
             sequence
          Length = 188848

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 108   cccccgccatcctgccccgccccc 131
             |||||||||||||||||| |||||
Sbjct: 27258 cccccgccatcctgcccccccccc 27235
to top
>gb|AC159228.2| Mus musculus BAC clone RP24-338I14 from chromosome 13, complete
             sequence
          Length = 158726

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     acttcttccccttcactcca 20
             ||||||||||||||||||||
Sbjct: 97080 acttcttccccttcactcca 97061
to top
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02,
             complete sequence
          Length = 93826

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    gccacagccgctgccgccgc 99
             ||||||||||||||||||||
Sbjct: 90085 gccacagccgctgccgccgc 90104
to top
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     cctccggacgcggcagccgc 190
               ||||||||||||||||||||
Sbjct: 1057609 cctccggacgcggcagccgc 1057590
to top
>gb|AC145549.3| Mus musculus BAC clone RP23-21M23 from chromosome 19, complete sequence
          Length = 247655

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 108   cccccgccatcctgccccgccccc 131
             |||||||||||||||||| |||||
Sbjct: 86041 cccccgccatcctgcccccccccc 86018
to top
>gb|AC132957.3| Mus musculus BAC clone RP23-149E9 from chromosome 19, complete sequence
          Length = 246177

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 108    cccccgccatcctgccccgccccc 131
              |||||||||||||||||| |||||
Sbjct: 146248 cccccgccatcctgcccccccccc 146225
to top
>emb|AL445072.17| Human DNA sequence from clone RP11-13E5 on chromosome X Contains a
             novel gene, the gene for a novel protein similar to
             KIAA1892 and a CpG island, complete sequence
          Length = 134277

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     tcttccccttcactccaccc 23
             ||||||||||||||||||||
Sbjct: 97620 tcttccccttcactccaccc 97601
to top
>emb|AL136379.19| Human DNA sequence from clone RP5-881P19 on chromosome 1q42.11-42.3
             Contains the WNT3A gene for wingless-type MMTV integration
             site family member 3A protein, a novel protein, the ARF1
             gene for ADP-ribosylation factor 1 protein, a C1orf35 gene
             for chromosome 1 open reading frame 35, the MRPL55 gene
             for  mitochondrial ribosomal protein L55, a novel
             processed pseudogene and six CpG islands, complete
             sequence
          Length = 127816

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    cactccaccccatacacaaa 33
             ||||||||||||||||||||
Sbjct: 55369 cactccaccccatacacaaa 55388
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>gb|AF169829.1| Mus musculus glycoprotein IIb (GPalpha IIb) gene, GPalpha IIb-ITG2B
             allele, complete cds
          Length = 25662

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   tcctgccccgcccccgcagg 136
             ||||||||||||||||||||
Sbjct: 19205 tcctgccccgcccccgcagg 19186
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>gb|AE006462.1| Homo sapiens 16p13.3 sequence section 1 of 8
          Length = 258002

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     cccttcactccaccccatac 28
             ||||||||||||||||||||
Sbjct: 18164 cccttcactccaccccatac 18183
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>emb|BX571773.12| Zebrafish DNA sequence from clone DKEY-174K1 in linkage group 6,
             complete sequence
          Length = 135439

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   cgtgcgcctcagcgagcagc 169
             ||||||||||||||||||||
Sbjct: 80399 cgtgcgcctcagcgagcagc 80380
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>gb|AC008742.9| Homo sapiens chromosome 19 clone CTD-2553C6, complete sequence
          Length = 194624

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    gccacagccgctgccgccgc 99
             ||||||||||||||||||||
Sbjct: 80874 gccacagccgctgccgccgc 80855
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>gb|AC104462.1| Homo sapiens chromosome 1 clone RP11-522M21, complete sequence
          Length = 183271

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     cttcttccccttcactccac 21
             ||||||||||||||||||||
Sbjct: 59016 cttcttccccttcactccac 58997
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 151     gtgcgcctcagcgagcagcgcctc 174
               ||||||||| ||||||||||||||
Sbjct: 2111512 gtgcgcctcggcgagcagcgcctc 2111535
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>tpg|BK001428.1| TPA: TPA_exp: Homo sapiens NOELIN2_V1 (OLFM2) gene, complete cds
          Length = 84679

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    gccacagccgctgccgccgc 99
             ||||||||||||||||||||
Sbjct: 23964 gccacagccgctgccgccgc 23983
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 80       gccacagccgctgccgccgc 99
                ||||||||||||||||||||
Sbjct: 12404856 gccacagccgctgccgccgc 12404837
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 80       gccacagccgctgccgccgc 99
                ||||||||||||||||||||
Sbjct: 16132093 gccacagccgctgccgccgc 16132112



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 80       gccacagccgctgccgccgc 99
                ||||||||||||||||||||
Sbjct: 10923142 gccacagccgctgccgccgc 10923123
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 80       gccacagccgctgccgccgc 99
                ||||||||||||||||||||
Sbjct: 22595035 gccacagccgctgccgccgc 22595054
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 171    cctccggacgcggcagccgccggc 194
              |||||||||||||| |||||||||
Sbjct: 322499 cctccggacgcggccgccgccggc 322522
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>gb|AC007218.6| Homo sapiens chromosome 16 clone RP11-297M9, complete sequence
          Length = 193220

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   caattcttttggaaaaggaa 323
             ||||||||||||||||||||
Sbjct: 88408 caattcttttggaaaaggaa 88389
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>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0512H04
          Length = 151049

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     gccacagccgctgccgccgc 99
              ||||||||||||||||||||
Sbjct: 146865 gccacagccgctgccgccgc 146846
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>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0005A05
          Length = 190834

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 171   cctccggacgcggcagccgccggc 194
             |||||||||||||| |||||||||
Sbjct: 74337 cctccggacgcggccgccgccggc 74360
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>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0556H01
          Length = 149800

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    gccacagccgctgccgccgc 99
             ||||||||||||||||||||
Sbjct: 36694 gccacagccgctgccgccgc 36713
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>dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1328_D07
          Length = 155007

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     gccacagccgctgccgccgc 99
              ||||||||||||||||||||
Sbjct: 132306 gccacagccgctgccgccgc 132325
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>dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0698G06
          Length = 138282

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    gccacagccgctgccgccgc 99
             ||||||||||||||||||||
Sbjct: 62847 gccacagccgctgccgccgc 62828
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>dbj|AK120739.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003N01, full
           insert sequence
          Length = 3515

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  gccacagccgctgccgccgc 99
           ||||||||||||||||||||
Sbjct: 464 gccacagccgctgccgccgc 483
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>dbj|AK119550.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E04, full
           insert sequence
          Length = 1265

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 171 cctccggacgcggcagccgccggc 194
           |||||||||||||| |||||||||
Sbjct: 414 cctccggacgcggccgccgccggc 391
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>dbj|AK104735.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D01, full
           insert sequence
          Length = 1260

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 171 cctccggacgcggcagccgccggc 194
           |||||||||||||| |||||||||
Sbjct: 414 cctccggacgcggccgccgccggc 391
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>dbj|AK104669.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-B02, full
           insert sequence
          Length = 1256

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 171 cctccggacgcggcagccgccggc 194
           |||||||||||||| |||||||||
Sbjct: 410 cctccggacgcggccgccgccggc 387
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>dbj|AK104238.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H12, full
           insert sequence
          Length = 1260

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 171 cctccggacgcggcagccgccggc 194
           |||||||||||||| |||||||||
Sbjct: 414 cctccggacgcggccgccgccggc 391
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>dbj|AK104189.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C06, full
           insert sequence
          Length = 1259

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 171 cctccggacgcggcagccgccggc 194
           |||||||||||||| |||||||||
Sbjct: 414 cctccggacgcggccgccgccggc 391
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>dbj|AK098946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045H04, full
           insert sequence
          Length = 1256

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 171 cctccggacgcggcagccgccggc 194
           |||||||||||||| |||||||||
Sbjct: 426 cctccggacgcggccgccgccggc 403
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>dbj|AK061325.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G05, full
           insert sequence
          Length = 1265

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 171 cctccggacgcggcagccgccggc 194
           |||||||||||||| |||||||||
Sbjct: 414 cctccggacgcggccgccgccggc 391
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 80       gccacagccgctgccgccgc 99
                ||||||||||||||||||||
Sbjct: 12359226 gccacagccgctgccgccgc 12359207
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>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 163702

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     gccacagccgctgccgccgc 99
              ||||||||||||||||||||
Sbjct: 119221 gccacagccgctgccgccgc 119202
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>emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb0080P14 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 132241

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   gccacagccgctgccgccgc 99
            ||||||||||||||||||||
Sbjct: 6334 gccacagccgctgccgccgc 6315
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>gb|AC173481.1| Mus musculus BAC clone RP23-411A24 from chromosome 13, complete
             sequence
          Length = 203948

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     acttcttccccttcactcca 20
             ||||||||||||||||||||
Sbjct: 18703 acttcttccccttcactcca 18722
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>gb|L39062.1|HUMIL9R Homo sapiens interleukin 9 receptor IL9R pseudogene, exons 1-9
          Length = 13649

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     cccttcactccaccccatac 28
             ||||||||||||||||||||
Sbjct: 11506 cccttcactccaccccatac 11487
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>emb|AL596258.15| Mouse DNA sequence from clone RP23-226P4 on chromosome 11, complete
             sequence
          Length = 219037

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tcctgccccgcccccgcagg 136
             ||||||||||||||||||||
Sbjct: 98019 tcctgccccgcccccgcagg 98038
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>emb|Z84723.1|HSLAW2 Human DNA sequence from phage LAW2 from a contig from the tip of the
            short arm of chromosome 16, spanning 2Mb of 16p13.3
            Contains Interleukin 9 receptor pseudogene
          Length = 17000

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 9    cccttcactccaccccatac 28
            ||||||||||||||||||||
Sbjct: 7526 cccttcactccaccccatac 7545


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,240,932
Number of Sequences: 3902068
Number of extensions: 3240932
Number of successful extensions: 79639
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78647
Number of HSP's gapped (non-prelim): 991
length of query: 415
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 393
effective length of database: 17,147,199,772
effective search space: 6738849510396
effective search space used: 6738849510396
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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