ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast69b10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_474328.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1677 Score = 329 bits (166), Expect = 3e-87 Identities = 214/230 (93%) Strand = Plus / Plus Query: 46 gccgacgtacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggg 105 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 672 gccgacgtacctgtggacgctccccatgttccacgccaatggctggagcttcccatgggg 731 Query: 106 gatggccgtggtgggcggcaccaacgtctgcctccgccgcgtcgacgccgccgaggtcta 165 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 732 gatggccgtggtgggcggcaccaacgtctgcctccgccgcgtcgacgccgccgaggtgtt 791 Query: 166 cgacaccatcgcccgccgcggggtcacgcacctctgcggcgcgccagtcgtgctcaacat 225 |||||| ||||| |||||||| |||| ||||| ||||||||||| |||||||||||||| Sbjct: 792 cgacacaatcgcgcgccgcggcgtcaaccacctgtgcggcgcgcccgtcgtgctcaacat 851 Query: 226 gctggccaacgcgcccgagggcgtgcggaggccgctgccggtgaaggtgc 275 |||||| |||||||||||||||||||||| |||||| |||| |||||||| Sbjct: 852 gctggcgaacgcgcccgagggcgtgcggaagccgctcccggggaaggtgc 901
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 329 bits (166), Expect = 3e-87 Identities = 214/230 (93%) Strand = Plus / Minus Query: 46 gccgacgtacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggg 105 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 98583 gccgacgtacctgtggacgctccccatgttccacgccaatggctggagcttcccatgggg 98524 Query: 106 gatggccgtggtgggcggcaccaacgtctgcctccgccgcgtcgacgccgccgaggtcta 165 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 98523 gatggccgtggtgggcggcaccaacgtctgcctccgccgcgtcgacgccgccgaggtgtt 98464 Query: 166 cgacaccatcgcccgccgcggggtcacgcacctctgcggcgcgccagtcgtgctcaacat 225 |||||| ||||| |||||||| |||| ||||| ||||||||||| |||||||||||||| Sbjct: 98463 cgacacaatcgcgcgccgcggcgtcaaccacctgtgcggcgcgcccgtcgtgctcaacat 98404 Query: 226 gctggccaacgcgcccgagggcgtgcggaggccgctgccggtgaaggtgc 275 |||||| |||||||||||||||||||||| |||||| |||| |||||||| Sbjct: 98403 gctggcgaacgcgcccgagggcgtgcggaagccgctcccggggaaggtgc 98354
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 329 bits (166), Expect = 3e-87 Identities = 214/230 (93%) Strand = Plus / Minus Query: 46 gccgacgtacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggg 105 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 34481098 gccgacgtacctgtggacgctccccatgttccacgccaatggctggagcttcccatgggg 34481039 Query: 106 gatggccgtggtgggcggcaccaacgtctgcctccgccgcgtcgacgccgccgaggtcta 165 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 34481038 gatggccgtggtgggcggcaccaacgtctgcctccgccgcgtcgacgccgccgaggtgtt 34480979 Query: 166 cgacaccatcgcccgccgcggggtcacgcacctctgcggcgcgccagtcgtgctcaacat 225 |||||| ||||| |||||||| |||| ||||| ||||||||||| |||||||||||||| Sbjct: 34480978 cgacacaatcgcgcgccgcggcgtcaaccacctgtgcggcgcgcccgtcgtgctcaacat 34480919 Query: 226 gctggccaacgcgcccgagggcgtgcggaggccgctgccggtgaaggtgc 275 |||||| |||||||||||||||||||||| |||||| |||| |||||||| Sbjct: 34480918 gctggcgaacgcgcccgagggcgtgcggaagccgctcccggggaaggtgc 34480869
>dbj|AK106615.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-H10, full insert sequence Length = 1897 Score = 329 bits (166), Expect = 3e-87 Identities = 214/230 (93%) Strand = Plus / Plus Query: 46 gccgacgtacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggg 105 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 766 gccgacgtacctgtggacgctccccatgttccacgccaatggctggagcttcccatgggg 825 Query: 106 gatggccgtggtgggcggcaccaacgtctgcctccgccgcgtcgacgccgccgaggtcta 165 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 826 gatggccgtggtgggcggcaccaacgtctgcctccgccgcgtcgacgccgccgaggtgtt 885 Query: 166 cgacaccatcgcccgccgcggggtcacgcacctctgcggcgcgccagtcgtgctcaacat 225 |||||| ||||| |||||||| |||| ||||| ||||||||||| |||||||||||||| Sbjct: 886 cgacacaatcgcgcgccgcggcgtcaaccacctgtgcggcgcgcccgtcgtgctcaacat 945 Query: 226 gctggccaacgcgcccgagggcgtgcggaggccgctgccggtgaaggtgc 275 |||||| |||||||||||||||||||||| |||||| |||| |||||||| Sbjct: 946 gctggcgaacgcgcccgagggcgtgcggaagccgctcccggggaaggtgc 995
>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete sequence Length = 138387 Score = 329 bits (166), Expect = 3e-87 Identities = 214/230 (93%) Strand = Plus / Minus Query: 46 gccgacgtacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggg 105 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 102647 gccgacgtacctgtggacgctccccatgttccacgccaatggctggagcttcccatgggg 102588 Query: 106 gatggccgtggtgggcggcaccaacgtctgcctccgccgcgtcgacgccgccgaggtcta 165 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 102587 gatggccgtggtgggcggcaccaacgtctgcctccgccgcgtcgacgccgccgaggtgtt 102528 Query: 166 cgacaccatcgcccgccgcggggtcacgcacctctgcggcgcgccagtcgtgctcaacat 225 |||||| ||||| |||||||| |||| ||||| ||||||||||| |||||||||||||| Sbjct: 102527 cgacacaatcgcgcgccgcggcgtcaaccacctgtgcggcgcgcccgtcgtgctcaacat 102468 Query: 226 gctggccaacgcgcccgagggcgtgcggaggccgctgccggtgaaggtgc 275 |||||| |||||||||||||||||||||| |||||| |||| |||||||| Sbjct: 102467 gctggcgaacgcgcccgagggcgtgcggaagccgctcccggggaaggtgc 102418
>emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0103C06, complete sequence Length = 104146 Score = 329 bits (166), Expect = 3e-87 Identities = 214/230 (93%) Strand = Plus / Minus Query: 46 gccgacgtacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggg 105 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 12980 gccgacgtacctgtggacgctccccatgttccacgccaatggctggagcttcccatgggg 12921 Query: 106 gatggccgtggtgggcggcaccaacgtctgcctccgccgcgtcgacgccgccgaggtcta 165 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 12920 gatggccgtggtgggcggcaccaacgtctgcctccgccgcgtcgacgccgccgaggtgtt 12861 Query: 166 cgacaccatcgcccgccgcggggtcacgcacctctgcggcgcgccagtcgtgctcaacat 225 |||||| ||||| |||||||| |||| ||||| ||||||||||| |||||||||||||| Sbjct: 12860 cgacacaatcgcgcgccgcggcgtcaaccacctgtgcggcgcgcccgtcgtgctcaacat 12801 Query: 226 gctggccaacgcgcccgagggcgtgcggaggccgctgccggtgaaggtgc 275 |||||| |||||||||||||||||||||| |||||| |||| |||||||| Sbjct: 12800 gctggcgaacgcgcccgagggcgtgcggaagccgctcccggggaaggtgc 12751
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 85.7 bits (43), Expect = 7e-14 Identities = 79/91 (86%) Strand = Plus / Plus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggcc 112 ||||||||||||||||||||||||||| |||||||||| ||||||| ||| ||||| Sbjct: 2819715 tacctgtggacgctgcccatgttccactgcaacggctggtgcttcccctggaccatggcg 2819774 Query: 113 gtggtgggcggcaccaacgtctgcctccgcc 143 ||||||| ||| |||| ||||||||| |||| Sbjct: 2819775 gtggtggccggaaccagcgtctgcctgcgcc 2819805 Score = 56.0 bits (28), Expect = 6e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 56 ctgtggacgctgcccatgttccacgccaacggctggagcttccc 99 |||||||| ||||||||||||||| |||||||||| ||||||| Sbjct: 2679357 ctgtggaccctgcccatgttccactgcaacggctggtgcttccc 2679314 Score = 42.1 bits (21), Expect = 0.95 Identities = 27/29 (93%) Strand = Plus / Plus Query: 198 tctgcggcgcgccagtcgtgctcaacatg 226 ||||||||||||| |||||||||||||| Sbjct: 2819860 tctgcggcgcgcccatcgtgctcaacatg 2819888
>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08, complete sequence Length = 138054 Score = 83.8 bits (42), Expect = 3e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 46 gccgacgtacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggg 105 |||||||||||||||||| |||||||||||||| ||||||||||| | | |||||||| Sbjct: 92476 gccgacgtacctgtggactgtgcccatgttccactgcaacggctggaacctgccgtgggg 92417 Query: 106 gatggccgtggtgggcggcaccaacgtctgcctccgcc 143 | ||| || ||||||||||||| |||||||||||| Sbjct: 92416 cgtcgccatgcagggcggcaccaacatctgcctccgcc 92379
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 83.8 bits (42), Expect = 3e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 46 gccgacgtacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggg 105 |||||||||||||||||| |||||||||||||| ||||||||||| | | |||||||| Sbjct: 1867614 gccgacgtacctgtggactgtgcccatgttccactgcaacggctggaacctgccgtgggg 1867555 Query: 106 gatggccgtggtgggcggcaccaacgtctgcctccgcc 143 | ||| || ||||||||||||| |||||||||||| Sbjct: 1867554 cgtcgccatgcagggcggcaccaacatctgcctccgcc 1867517 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 52 gtacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggc 111 |||||||||||||||||||||||||||| |||||| |||| |||| | ||||| ||||| Sbjct: 1686669 gtacctgtggacgctgcccatgttccactgcaacgggtggaccttcacctggggcatggc 1686728 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 52 gtacctgtggacgctgcccatgttcca 78 |||||||||||| |||||||||||||| Sbjct: 10797293 gtacctgtggactctgcccatgttcca 10797267
>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06, complete sequence Length = 122218 Score = 83.8 bits (42), Expect = 3e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 46 gccgacgtacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggg 105 |||||||||||||||||| |||||||||||||| ||||||||||| | | |||||||| Sbjct: 107797 gccgacgtacctgtggactgtgcccatgttccactgcaacggctggaacctgccgtgggg 107856 Query: 106 gatggccgtggtgggcggcaccaacgtctgcctccgcc 143 | ||| || ||||||||||||| |||||||||||| Sbjct: 107857 cgtcgccatgcagggcggcaccaacatctgcctccgcc 107894
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 83.8 bits (42), Expect = 3e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 46 gccgacgtacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggg 105 |||||||||||||||||| |||||||||||||| ||||||||||| | | |||||||| Sbjct: 1867612 gccgacgtacctgtggactgtgcccatgttccactgcaacggctggaacctgccgtgggg 1867553 Query: 106 gatggccgtggtgggcggcaccaacgtctgcctccgcc 143 | ||| || ||||||||||||| |||||||||||| Sbjct: 1867552 cgtcgccatgcagggcggcaccaacatctgcctccgcc 1867515 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 52 gtacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggc 111 |||||||||||||||||||||||||||| |||||| |||| |||| | ||||| ||||| Sbjct: 1686667 gtacctgtggacgctgcccatgttccactgcaacgggtggaccttcacctggggcatggc 1686726 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 52 gtacctgtggacgctgcccatgttcca 78 |||||||||||| |||||||||||||| Sbjct: 10795394 gtacctgtggactctgcccatgttcca 10795368
>emb|AM260515.1| Platanus acerifolia partial mRNA for AMP-binding protein (ampbp gene) Length = 626 Score = 83.8 bits (42), Expect = 3e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 57 tgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggccgtgg 116 ||||||| || |||||||||||||||||||||||| |||||||||||||||||| | | Sbjct: 21 tgtggaccctacccatgttccacgccaacggctggtccttcccgtgggggatggcggccg 80 Query: 117 tgggcggcaccaacgtctgcctccgc 142 | ||||| |||||| |||| |||||| Sbjct: 81 tcggcgggaccaacatctgtctccgc 106 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 203 ggcgcgccagtcgtgctcaacatgctggccaacgc 237 |||||||| ||||||||||||||||| |||||||| Sbjct: 167 ggcgcgcccgtcgtgctcaacatgcttgccaacgc 201
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 71.9 bits (36), Expect = 1e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtggg 104 ||||||||||||||||| ||||||||| |||||||||| |||||||||||| Sbjct: 1959867 tacctgtggacgctgccgatgttccactgcaacggctggtgcttcccgtggg 1959816
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 71.9 bits (36), Expect = 1e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtggg 104 ||||||||||||||||||||||||||| |||||||||| ||||| |||||| Sbjct: 1426325 tacctgtggacgctgcccatgttccactgcaacggctggtgcttcacgtggg 1426274 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 ccgccgaggtctacgacacc 172 |||||||||||||||||||| Sbjct: 1527057 ccgccgaggtctacgacacc 1527038
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 69.9 bits (35), Expect = 4e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgg 103 ||||||||||||||||| ||||||||| |||||||||| ||||||||||| Sbjct: 2380431 tacctgtggacgctgccgatgttccactgcaacggctggtgcttcccgtgg 2380481
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 198 tctgcggcgcgccagtcgtgctcaacatgctggccaacgcgcccga 243 ||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 707660 tctgcggcgcgcccatcgtgctgaacatgctggccaacgcgcccga 707705 Score = 40.1 bits (20), Expect = 3.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 56 ctgtggacgctgcccatgttccacgccaacggctgg 91 |||||||||||||| ||||| ||| |||||||||| Sbjct: 707518 ctgtggacgctgccgatgtttcactgcaacggctgg 707553
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 56 ctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggccg 113 |||||||||||||| ||||||||| |||||||||| ||||||||||| |||||||| Sbjct: 2037152 ctgtggacgctgccgatgttccactgcaacggctggtgcttcccgtggacgatggccg 2037095 Score = 61.9 bits (31), Expect = 1e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 52 gtacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggc 111 ||||||||||||| |||| ||||||||| |||||||||| ||||| ||||| |||||| Sbjct: 3862613 gtacctgtggacgttgccgatgttccactgcaacggctggtgcttcgcgtggacgatggc 3862554 Query: 112 cgtggtgggcggcaccaacgtctgcctccgccgcgtcga 150 | | ||||||||||||||| || ||||||||||| Sbjct: 3862553 ggccaacgccggcaccaacgtctgtctgcgccgcgtcga 3862515
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 65.9 bits (33), Expect = 7e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggcc 112 ||||||||||||||||| ||||||||| |||||||||| |||| ||||||| | ||||| Sbjct: 2798974 tacctgtggacgctgccgatgttccactgcaacggctggtgctttccgtgggcggtggcc 2799033 Query: 113 g 113 | Sbjct: 2799034 g 2799034
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 65.9 bits (33), Expect = 7e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggcc 112 ||||||||||||||||| ||||||||| |||||||||| |||| ||||||| | ||||| Sbjct: 981208 tacctgtggacgctgccgatgttccactgcaacggctggtgctttccgtgggcggtggcc 981267 Query: 113 g 113 | Sbjct: 981268 g 981268
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 65.9 bits (33), Expect = 7e-08 Identities = 54/61 (88%) Strand = Plus / Minus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggcc 112 ||||||||||||||||| ||||||||| |||||||||| |||| ||||||| | ||||| Sbjct: 1501179 tacctgtggacgctgccgatgttccactgcaacggctggtgctttccgtgggcggtggcc 1501120 Query: 113 g 113 | Sbjct: 1501119 g 1501119
>ref|XM_493818.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1737 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 52 gtacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggc 111 |||||||||||||||||||||||||||| |||||| |||| |||| | ||||| ||||| Sbjct: 672 gtacctgtggacgctgcccatgttccactgcaacgggtggaccttcacctggggcatggc 731
>dbj|AK110783.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-C04, full insert sequence Length = 1949 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 52 gtacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggc 111 |||||||||||||||||||||||||||| |||||| |||| |||| | ||||| ||||| Sbjct: 800 gtacctgtggacgctgcccatgttccactgcaacgggtggaccttcacctggggcatggc 859
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtggg 104 ||||||||||||||||| |||||||| |||||||||| |||||||||||| Sbjct: 2045062 tacctgtggacgctgccgatgttccattgcaacggctggtgcttcccgtggg 2045011
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 52 gtacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggc 111 |||||||||||||||||||||||||||| |||||| |||| |||| | ||||| ||||| Sbjct: 99132 gtacctgtggacgctgcccatgttccactgcaacgggtggaccttcacctggggcatggc 99191
>gb|AE004982.1| Halobacterium sp. NRC-1 section 13 of 170 of the complete genome Length = 13571 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctgg 91 ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 9880 tacctctggacgctgccgatgttccacgccaacggctgg 9918
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 56.0 bits (28), Expect = 6e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 56 ctgtggacgctgcccatgttccacgccaacggctggagcttccc 99 |||||||||||||| ||||||||| |||||||||| ||||||| Sbjct: 252133 ctgtggacgctgccgatgttccactgcaacggctggtgcttccc 252176
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 56.0 bits (28), Expect = 6e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 56 ctgtggacgctgcccatgttccacgccaacggctggagcttccc 99 |||||||||||||| ||||||||| |||||||||| ||||||| Sbjct: 3067289 ctgtggacgctgccgatgttccactgcaacggctggtgcttccc 3067246
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctgg 91 |||||||||||||| || |||||||||| |||||||||| Sbjct: 1646244 tacctgtggacgctcccgatgttccacgtcaacggctgg 1646282
>ref|XM_365968.1| Magnaporthe grisea 70-15 hypothetical protein (MG10188.4) partial mRNA Length = 1764 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 53 tacctgtggacgctgcccatgttccacgcc 82 |||||||||||||| ||||||||||||||| Sbjct: 766 tacctgtggacgcttcccatgttccacgcc 795
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Minus Query: 56 ctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggccg 113 |||||||||||||| ||||| ||| |||||||||| ||||||| ||| |||||||| Sbjct: 3036767 ctgtggacgctgccgatgtttcactgcaacggctggtgcttcccctggacgatggccg 3036710
>ref|XM_463896.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1967 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Plus Query: 52 gtacctgtggacgctgcccatgttccac 79 ||||||||||||| |||||||||||||| Sbjct: 825 gtacctgtggacggtgcccatgttccac 852
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 48.1 bits (24), Expect = 0.015 Identities = 42/48 (87%) Strand = Plus / Minus Query: 56 ctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgg 103 |||||||||||||| || |||||| |||||| ||| ||||||||||| Sbjct: 12700 ctgtggacgctgccgatattccactgcaacggttggtgcttcccgtgg 12653
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 48.1 bits (24), Expect = 0.015 Identities = 36/40 (90%) Strand = Plus / Minus Query: 52 gtacctgtggacgctgcccatgttccacgccaacggctgg 91 |||||||||||| ||||| ||||||||| |||||||||| Sbjct: 2416730 gtacctgtggaccctgccaatgttccactgcaacggctgg 2416691 Score = 48.1 bits (24), Expect = 0.015 Identities = 33/36 (91%) Strand = Plus / Minus Query: 187 ggtcacgcacctctgcggcgcgccagtcgtgctcaa 222 |||||||||||| ||||||||||| |||||||||| Sbjct: 2416595 ggtcacgcacctgtgcggcgcgcccatcgtgctcaa 2416560
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 48.1 bits (24), Expect = 0.015 Identities = 39/44 (88%) Strand = Plus / Minus Query: 56 ctgtggacgctgcccatgttccacgccaacggctggagcttccc 99 |||||||||||||| ||||| ||| |||||||||| ||||||| Sbjct: 2938816 ctgtggacgctgccgatgtttcactgcaacggctggtgcttccc 2938773
>emb|BX323601.6| Zebrafish DNA sequence from clone RP71-14P11, complete sequence Length = 207067 Score = 48.1 bits (24), Expect = 0.015 Identities = 75/92 (81%) Strand = Plus / Minus Query: 59 tggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggccgtggtg 118 ||||||||||| ||||| || ||| |||||| ||||||| ||| |||||| ||||| Sbjct: 69477 tggacgctgccaatgtttcattgcaatggctggtgcttcccctggacaatggccctggtg 69418 Query: 119 ggcggcaccaacgtctgcctccgccgcgtcga 150 | ||||||| ||||||||| || |||||||| Sbjct: 69417 gcaggcaccagcgtctgcctgcgtcgcgtcga 69386
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Plus Query: 52 gtacctgtggacgctgcccatgttccac 79 ||||||||||||| |||||||||||||| Sbjct: 1015031 gtacctgtggacggtgcccatgttccac 1015058
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Plus Query: 52 gtacctgtggacgctgcccatgttccac 79 ||||||||||||| |||||||||||||| Sbjct: 3739 gtacctgtggacggtgcccatgttccac 3766
>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1217_F02 Length = 118822 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Plus Query: 52 gtacctgtggacgctgcccatgttccac 79 ||||||||||||| |||||||||||||| Sbjct: 86450 gtacctgtggacggtgcccatgttccac 86477
>dbj|AK070181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043H21, full insert sequence Length = 1967 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Plus Query: 52 gtacctgtggacgctgcccatgttccac 79 ||||||||||||| |||||||||||||| Sbjct: 825 gtacctgtggacggtgcccatgttccac 852
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 48.1 bits (24), Expect = 0.015 Identities = 36/40 (90%) Strand = Plus / Plus Query: 52 gtacctgtggacgctgcccatgttccacgccaacggctgg 91 ||||||||||||| |||| ||||||||| |||||||||| Sbjct: 4029291 gtacctgtggacgttgccaatgttccactgcaacggctgg 4029330
>ref|NM_106373.2| Arabidopsis thaliana catalytic AT1G77240 mRNA, complete cds Length = 1832 Score = 46.1 bits (23), Expect = 0.061 Identities = 38/43 (88%) Strand = Plus / Plus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagct 95 ||||||||||| ||||| |||||||| ||||| || ||||||| Sbjct: 879 tacctgtggacactgccgatgttccatgccaatggttggagct 921
>gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1275B08, from chromosome 3, complete sequence Length = 108833 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 52 gtacctgtggacgctgcccatgttcca 78 |||||||||||| |||||||||||||| Sbjct: 57594 gtacctgtggactctgcccatgttcca 57620
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 46.1 bits (23), Expect = 0.061 Identities = 47/55 (85%) Strand = Plus / Plus Query: 59 tggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggccg 113 ||||| ||||||||||| ||| ||| |||||| |||||||||||| ||| |||| Sbjct: 2231251 tggaccctgcccatgtttcactgcaatggctggtgcttcccgtgggcgattgccg 2231305
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 46.1 bits (23), Expect = 0.061 Identities = 32/35 (91%) Strand = Plus / Plus Query: 57 tgtggacgctgcccatgttccacgccaacggctgg 91 ||||||||||||| |||||||| ||||| |||||| Sbjct: 696955 tgtggacgctgccgatgttccatgccaatggctgg 696989
>gb|AF503763.1| Arabidopsis thaliana adenosine monophosphate binding protein 4 AMPBP4 (AMPBP4) mRNA, complete cds Length = 1638 Score = 46.1 bits (23), Expect = 0.061 Identities = 38/43 (88%) Strand = Plus / Plus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagct 95 ||||||||||| ||||| |||||||| ||||| || ||||||| Sbjct: 685 tacctgtggacactgccgatgttccatgccaatggttggagct 727
>gb|AY064038.1| Arabidopsis thaliana unknown protein (At1g77230) mRNA, complete cds Length = 2579 Score = 46.1 bits (23), Expect = 0.061 Identities = 38/43 (88%) Strand = Plus / Minus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagct 95 ||||||||||| ||||| |||||||| ||||| || ||||||| Sbjct: 1703 tacctgtggacactgccgatgttccatgccaatggttggagct 1661
>emb|BX816525.1|CNS0AEL0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH53ZG09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2455 Score = 46.1 bits (23), Expect = 0.061 Identities = 38/43 (88%) Strand = Plus / Minus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagct 95 ||||||||||| ||||| |||||||| ||||| || ||||||| Sbjct: 1698 tacctgtggacactgccgatgttccatgccaatggttggagct 1656
>gb|AC004260.1| Arabidopsis thaliana chromosome I BAC T14N5 genomic sequence, complete sequence Length = 83822 Score = 46.1 bits (23), Expect = 0.061 Identities = 38/43 (88%) Strand = Plus / Minus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagct 95 ||||||||||| ||||| |||||||| ||||| || ||||||| Sbjct: 47432 tacctgtggacactgccgatgttccatgccaatggttggagct 47390
>dbj|AK176377.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL24-08-I16 Length = 2531 Score = 46.1 bits (23), Expect = 0.061 Identities = 38/43 (88%) Strand = Plus / Minus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagct 95 ||||||||||| ||||| |||||||| ||||| || ||||||| Sbjct: 1689 tacctgtggacactgccgatgttccatgccaatggttggagct 1647
>dbj|AK175665.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-15-K14 Length = 2479 Score = 46.1 bits (23), Expect = 0.061 Identities = 38/43 (88%) Strand = Plus / Minus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagct 95 ||||||||||| ||||| |||||||| ||||| || ||||||| Sbjct: 1703 tacctgtggacactgccgatgttccatgccaatggttggagct 1661
>dbj|AK175648.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-13-M16 Length = 2479 Score = 46.1 bits (23), Expect = 0.061 Identities = 38/43 (88%) Strand = Plus / Minus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagct 95 ||||||||||| ||||| |||||||| ||||| || ||||||| Sbjct: 1703 tacctgtggacactgccgatgttccatgccaatggttggagct 1661
>dbj|AK101765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064F11, full insert sequence Length = 1929 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 52 gtacctgtggacgctgcccatgttcca 78 |||||||||||| |||||||||||||| Sbjct: 838 gtacctgtggactctgcccatgttcca 864
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 44.1 bits (22), Expect = 0.24 Identities = 73/90 (81%) Strand = Plus / Minus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggcc 112 ||||||||| |||| || ||||||||| ||||||||||| |||| | ||||| |||| Sbjct: 128562 tacctgtggtcgctcccgatgttccactgcaacggctggaccttcacctggggcgtggcg 128503 Query: 113 gtggtgggcggcaccaacgtctgcctccgc 142 | | |||||||| ||||||||| ||||| Sbjct: 128502 gcgcgcggcggcacgaacgtctgcatccgc 128473
>gb|AY443344.1| Streptomyces globisporus putative reductase LndZ4 gene, complete cds Length = 564 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 140 cgccgcgtcgacgccgccgagg 161 |||||||||||||||||||||| Sbjct: 190 cgccgcgtcgacgccgccgagg 211
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.24 Identities = 28/30 (93%) Strand = Plus / Plus Query: 62 acgctgcccatgttccacgccaacggctgg 91 |||||||| |||||||||||||| |||||| Sbjct: 2535869 acgctgccgatgttccacgccaatggctgg 2535898 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 cgccgaggtctacgacacca 173 |||||||||||||||||||| Sbjct: 4780509 cgccgaggtctacgacacca 4780490 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 cgccgaggtctacgacacca 173 |||||||||||||||||||| Sbjct: 4778275 cgccgaggtctacgacacca 4778256
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.24 Identities = 73/90 (81%) Strand = Plus / Minus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagcttcccgtgggggatggcc 112 ||||||||| |||| || ||||||||| ||||||||||| |||| | ||||| |||| Sbjct: 21782542 tacctgtggtcgctcccgatgttccactgcaacggctggaccttcacctggggcgtggcg 21782483 Query: 113 gtggtgggcggcaccaacgtctgcctccgc 142 | | |||||||| ||||||||| ||||| Sbjct: 21782482 gcgcgcggcggcacgaacgtctgcatccgc 21782453
>gb|AF241171.1|AF241171 Pseudomonas aeruginosa pathogenicity island PAGI-1 gene, complete sequence Length = 51300 Score = 44.1 bits (22), Expect = 0.24 Identities = 37/42 (88%) Strand = Plus / Plus Query: 53 tacctgtggacgctgcccatgttccacgccaacggctggagc 94 ||||||||||| |||| ||||||||| ||||||||||||| Sbjct: 12086 tacctgtggaccttgccgatgttccactgcaacggctggagc 12127
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 57 tgtggacgctgcccatgttccacgcc 82 ||||| |||||||||||||||||||| Sbjct: 373 tgtggccgctgcccatgttccacgcc 348
>gb|AY107917.1| Zea mays PCO071987 mRNA sequence Length = 1735 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 53 tacctgtggacgctgcccatgttcca 78 ||||||||||| |||||||||||||| Sbjct: 519 tacctgtggactctgcccatgttcca 544
>gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence Length = 114178 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 caacgcgcccgagggcgtgcg 252 ||||||||||||||||||||| Sbjct: 84281 caacgcgcccgagggcgtgcg 84301
>emb|AJ534392.1|ECO534392 Escherichia coli ORF1, ORF2, ORF3, ORF4 and partial st55 pseudogene, strain 493/89 Length = 8846 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 ggcgcgccagtcgtgctcaac 223 ||||||||||||||||||||| Sbjct: 6555 ggcgcgccagtcgtgctcaac 6535
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 104 gggatggccgtggtgggcggcacca 128 ||||||| ||||||||||||||||| Sbjct: 3788383 gggatgggcgtggtgggcggcacca 3788359
>gb|BT009376.1| Triticum aestivum clone wlm96.pk030.e11:fis, full insert mRNA sequence Length = 1588 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 tccgccgcgtcgacgccgccgaggt 162 ||||||||||||||||| ||||||| Sbjct: 947 tccgccgcgtcgacgccaccgaggt 971
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 gccgcgtcgacgccgccgagg 161 ||||||||||||||||||||| Sbjct: 74848 gccgcgtcgacgccgccgagg 74868
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 0.95 Identities = 36/41 (87%) Strand = Plus / Plus Query: 59 tggacgctgcccatgttccacgccaacggctggagcttccc 99 ||||||||||| |||||||| |||||||||| ||||||| Sbjct: 5000115 tggacgctgccgatgttccattgcaacggctggtgcttccc 5000155 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 cgtgctcaacatgctggccaacgc 237 ||||||||||||||||| |||||| Sbjct: 6525356 cgtgctcaacatgctggtcaacgc 6525379
>gb|AF326777.3| Shigella flexneri 2a SRL pathogenicity island, complete sequence Length = 66715 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 ggcgcgccagtcgtgctcaac 223 ||||||||||||||||||||| Sbjct: 50349 ggcgcgccagtcgtgctcaac 50369
>ref|NM_192323.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 756 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 cgcgtcgacgccgccgaggt 162 |||||||||||||||||||| Sbjct: 285 cgcgtcgacgccgccgaggt 266
>ref|XM_478649.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3237 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 tccgccgcgtcgacgccgcc 157 |||||||||||||||||||| Sbjct: 256 tccgccgcgtcgacgccgcc 237
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 158 gaggtctacgacaccatcgcccgccgcg 185 |||||| || |||||||||||||||||| Sbjct: 668000 gaggtccaccacaccatcgcccgccgcg 667973
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tggccgtggtgggcggcacc 127 |||||||||||||||||||| Sbjct: 4829116 tggccgtggtgggcggcacc 4829097
>ref|XM_849827.1| PREDICTED: Canis familiaris similar to zinc finger protein 124 (LOC612099), mRNA Length = 1287 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 acgacaccatcgcccgccgc 184 |||||||||||||||||||| Sbjct: 762 acgacaccatcgcccgccgc 743
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 52 gtacctgtggacgctgcccatgttccac 79 ||||||||||||| |||| ||||||||| Sbjct: 569335 gtacctgtggacgttgccgatgttccac 569308
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cgtggtgggcggcaccaacg 131 |||||||||||||||||||| Sbjct: 98015 cgtggtgggcggcaccaacg 98034
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 142 ccgcgtcgacgccgccgaggtctacgac 169 |||||||| ||||||||||||| ||||| Sbjct: 63739 ccgcgtcggcgccgccgaggtcgacgac 63766
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 145 cgtcgacgccgccgaggtctacgacacc 172 |||||||||||||||| || |||||||| Sbjct: 96731 cgtcgacgccgccgagttcgacgacacc 96758
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tccgccgcgtcgacgccgcc 157 |||||||||||||||||||| Sbjct: 21814694 tccgccgcgtcgacgccgcc 21814713
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 cgtcgacgccgccgaggtctacga 168 ||||||||||||||||||| |||| Sbjct: 1874464 cgtcgacgccgccgaggtcgacga 1874441
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 cgcgtcgacgccgccgaggt 162 |||||||||||||||||||| Sbjct: 26036673 cgcgtcgacgccgccgaggt 26036654
>gb|AE009565.1| Brucella melitensis 16M chromosome I, section 122 of 195 of the complete sequence Length = 10029 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 158 gaggtctacgacaccatcgcccgccgcg 185 |||||| || |||||||||||||||||| Sbjct: 8601 gaggtccaccacaccatcgcccgccgcg 8628
>dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0707D10 Length = 172003 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 cgcgtcgacgccgccgaggt 162 |||||||||||||||||||| Sbjct: 132740 cgcgtcgacgccgccgaggt 132721
>dbj|AP003234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0038D11 Length = 156465 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 cgcgtcgacgccgccgaggt 162 |||||||||||||||||||| Sbjct: 40248 cgcgtcgacgccgccgaggt 40229
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03 Length = 153170 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tccgccgcgtcgacgccgcc 157 |||||||||||||||||||| Sbjct: 131877 tccgccgcgtcgacgccgcc 131896
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 158 gaggtctacgacaccatcgcccgccgcg 185 |||||| || |||||||||||||||||| Sbjct: 689686 gaggtccaccacaccatcgcccgccgcg 689659
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 cgtcgacgccgccgaggtctacga 168 ||||||||||||||||||| |||| Sbjct: 3244 cgtcgacgccgccgaggtcgacga 3221
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 cgtcgacgccgccgaggtctacga 168 ||||||||||||||||||| |||| Sbjct: 74942 cgtcgacgccgccgaggtcgacga 74919
>dbj|AK101616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052G09, full insert sequence Length = 3238 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 tccgccgcgtcgacgccgcc 157 |||||||||||||||||||| Sbjct: 257 tccgccgcgtcgacgccgcc 238
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 tcgtgctcaacatgctggccaacg 236 ||||||||||| |||||||||||| Sbjct: 2220028 tcgtgctcaacgtgctggccaacg 2220005
>dbj|AK063692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-F10, full insert sequence Length = 1546 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 cgtcgacgccgccgaggtctacga 168 ||||||||||||||||||| |||| Sbjct: 422 cgtcgacgccgccgaggtcgacga 445
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041B22 Length = 142446 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tccgccgcgtcgacgccgcc 157 |||||||||||||||||||| Sbjct: 28370 tccgccgcgtcgacgccgcc 28389
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 158 gaggtctacgacaccatcgcccgccgcg 185 |||||| || |||||||||||||||||| Sbjct: 685982 gaggtccaccacaccatcgcccgccgcg 685955 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,486,094 Number of Sequences: 3902068 Number of extensions: 1486094 Number of successful extensions: 40546 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 38290 Number of HSP's gapped (non-prelim): 2252 length of query: 286 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 264 effective length of database: 17,147,199,772 effective search space: 4526860739808 effective search space used: 4526860739808 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
