ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast69b08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197819.1| Oryza sativa (japonica cultivar-group) putative... 161 2e-36
2dbj|AK103251.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 9e-36
3gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 gen... 86 1e-13
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 86 1e-13
6ref|XM_550476.1| Oryza sativa (japonica cultivar-group), mRNA 58 2e-05
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
8dbj|AP002805.2| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
9dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
10gb|BT016551.1| Zea mays clone Contig384 mRNA sequence 50 0.006
11gb|AY110061.1| Zea mays CL537_1 mRNA sequence 50 0.006
12emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete ... 44 0.37
13gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 44 0.37
14dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.37
15gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.37
16dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.37
17gb|DQ230893.1| Anopheles gambiae strain SUA proximal 2La inversi... 42 1.5
18gb|AE005689.1| Caulobacter crescentus CB15 section 15 of 359 of ... 42 1.5
19gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.5
20gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 1.5
21ref|XM_482395.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
22gb|AE017129.1| Yersinia pestis biovar Medievalis str. 91001 sect... 40 5.8
23gb|AC160935.2| Mus musculus BAC clone RP23-456B7 from chromosome... 40 5.8
24gb|AE009952.1| Yersinia pestis KIM, complete genome 40 5.8
25gb|BC023502.1| Mus musculus protein kinase C and casein kinase s... 40 5.8
26gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 5.8
27gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 5.8
28gb|AE008802.1| Salmonella typhimurium LT2, section 106 of 220 of... 40 5.8
29emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 5.8
30emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 40 5.8
31emb|AJ414156.1| Yersinia pestis strain CO92 complete genome; seg... 40 5.8
32gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 5.8
33ref|XM_686447.1| PREDICTED: Danio rerio similar to chordin-like ... 40 5.8
34gb|AC158999.2| Mus musculus BAC clone RP24-201N16 from chromosom... 40 5.8
35dbj|AK052328.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 5.8
36dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
37dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
38gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 5.8
39gb|AC119867.11| Mus musculus chromosome 1, clone RP23-411L6, com... 40 5.8
40gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 40 5.8
41dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
42emb|BX005026.10| Zebrafish DNA sequence from clone DKEY-11J5, co... 40 5.8
43dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
44dbj|AK072217.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
45gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 5.8
46gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 40 5.8
47emb|AJ629123.1| Streptomyces sp. DSM 40477 genomic region of the... 40 5.8
48emb|AL583889.8| Mouse DNA sequence from clone RP23-10K12 on chro... 40 5.8 
>ref|NM_197819.1| Oryza sativa (japonica cultivar-group) putative
           beta-phosphoglucomutase (OSJNBa0095C07.1), mRNA
          Length = 1249

 Score =  161 bits (81), Expect = 2e-36
 Identities = 204/245 (83%)
 Strand = Plus / Plus

                                                                       
Query: 143 gaggcgatcctgttcgacatcgacggcaccctctgcgactccgaccccttccacttccgc 202
           ||||||||| |||| |||||||| ||||||||||||||||| || ||  |||| ||| ||
Sbjct: 138 gaggcgatcttgtttgacatcgatggcaccctctgcgactctgatcctatccatttctgc 197

                                                                       
Query: 203 gccttccgcgagctgctgcaggaggttggtttcaacaatggagtccccatcaccgaggaa 262
           ||||||||||| ||||||||| ||||||||||||||||||| || |||||| ||||||| 
Sbjct: 198 gccttccgcgaactgctgcagcaggttggtttcaacaatggcgtgcccatctccgaggag 257

                                                                       
Query: 263 ttctacagcgcaaacatcagcggatggcacaacgacgccctcgccggcgcgctgttcccg 322
           ||||||||||| || ||||||||  |||||||||| | ||||||  | ||  ||||||||
Sbjct: 258 ttctacagcgccaatatcagcggggggcacaacgatgacctcgcaagggccttgttcccg 317

                                                                       
Query: 323 gagctcgaccacgccaaggccatggagttcatggatcgcaaggaagccctgttcagaaag 382
           ||  | || || | |||||| ||| ||||||||||   |||||||||  ||| ||||| |
Sbjct: 318 gatttggatcatgacaaggcaatgaagttcatggacgacaaggaagcattgtacagaagg 377

                
Query: 383 ttggc 387
           |||||
Sbjct: 378 ttggc 382
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>dbj|AK103251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123M19, full
           insert sequence
          Length = 1653

 Score =  159 bits (80), Expect = 9e-36
 Identities = 143/164 (87%)
 Strand = Plus / Plus

                                                                       
Query: 143 gaggcgatcctgttcgacatcgacggcaccctctgcgactccgaccccttccacttccgc 202
           ||||||||| |||| |||||||| ||||||||||||||||| || ||  |||| ||| ||
Sbjct: 457 gaggcgatcttgtttgacatcgatggcaccctctgcgactctgatcctatccatttctgc 516

                                                                       
Query: 203 gccttccgcgagctgctgcaggaggttggtttcaacaatggagtccccatcaccgaggaa 262
           ||||||||||| ||||||||| ||||||||||||||||||| || |||||| ||||||| 
Sbjct: 517 gccttccgcgaactgctgcagcaggttggtttcaacaatggcgtgcccatctccgaggag 576

                                                       
Query: 263 ttctacagcgcaaacatcagcggatggcacaacgacgccctcgc 306
           ||||||||||| || ||||||||  |||||||||| | ||||||
Sbjct: 577 ttctacagcgccaatatcagcggggggcacaacgatgacctcgc 620
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>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete
             sequence
          Length = 187707

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 76/87 (87%)
 Strand = Plus / Plus

                                                                         
Query: 143   gaggcgatcctgttcgacatcgacggcaccctctgcgactccgaccccttccacttccgc 202
             ||||||||| |||| |||||||| ||||||||||||||||| || ||  |||| ||| ||
Sbjct: 41389 gaggcgatcttgtttgacatcgatggcaccctctgcgactctgatcctatccatttctgc 41448

                                        
Query: 203   gccttccgcgagctgctgcaggaggtt 229
             ||||||||||| ||||||||| |||||
Sbjct: 41449 gccttccgcgaactgctgcagcaggtt 41475



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                         
Query: 225   aggttggtttcaacaatggagtccccatcaccgaggaattctacagcgcaaacatcagcg 284
             ||||||||||||||||||| || |||||| ||||||| ||||||||||| || |||||||
Sbjct: 41582 aggttggtttcaacaatggcgtgcccatctccgaggagttctacagcgccaatatcagcg 41641

                                   
Query: 285   gatggcacaacgacgccctcgc 306
             |  |||||||||| | ||||||
Sbjct: 41642 gggggcacaacgatgacctcgc 41663
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 76/87 (87%)
 Strand = Plus / Plus

                                                                            
Query: 143      gaggcgatcctgttcgacatcgacggcaccctctgcgactccgaccccttccacttccgc 202
                ||||||||| |||| |||||||| ||||||||||||||||| || ||  |||| ||| ||
Sbjct: 22036845 gaggcgatcttgtttgacatcgatggcaccctctgcgactctgatcctatccatttctgc 22036904

                                           
Query: 203      gccttccgcgagctgctgcaggaggtt 229
                ||||||||||| ||||||||| |||||
Sbjct: 22036905 gccttccgcgaactgctgcagcaggtt 22036931



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                            
Query: 225      aggttggtttcaacaatggagtccccatcaccgaggaattctacagcgcaaacatcagcg 284
                ||||||||||||||||||| || |||||| ||||||| ||||||||||| || |||||||
Sbjct: 22037038 aggttggtttcaacaatggcgtgcccatctccgaggagttctacagcgccaatatcagcg 22037097

                                      
Query: 285      gatggcacaacgacgccctcgc 306
                |  |||||||||| | ||||||
Sbjct: 22037098 gggggcacaacgatgacctcgc 22037119
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 76/87 (87%)
 Strand = Plus / Plus

                                                                            
Query: 143      gaggcgatcctgttcgacatcgacggcaccctctgcgactccgaccccttccacttccgc 202
                ||||||||| |||| |||||||| ||||||||||||||||| || ||  |||| ||| ||
Sbjct: 22048508 gaggcgatcttgtttgacatcgatggcaccctctgcgactctgatcctatccatttctgc 22048567

                                           
Query: 203      gccttccgcgagctgctgcaggaggtt 229
                ||||||||||| ||||||||| |||||
Sbjct: 22048568 gccttccgcgaactgctgcagcaggtt 22048594



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                            
Query: 225      aggttggtttcaacaatggagtccccatcaccgaggaattctacagcgcaaacatcagcg 284
                ||||||||||||||||||| || |||||| ||||||| ||||||||||| || |||||||
Sbjct: 22048701 aggttggtttcaacaatggcgtgcccatctccgaggagttctacagcgccaatatcagcg 22048760

                                      
Query: 285      gatggcacaacgacgccctcgc 306
                |  |||||||||| | ||||||
Sbjct: 22048761 gggggcacaacgatgacctcgc 22048782
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>ref|XM_550476.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 756

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 152 ctgttcgacatcgacggcaccctctgcgactccgaccccttccac 196
           ||||||||||||||||||||| | |||| ||||||||| ||||||
Sbjct: 61  ctgttcgacatcgacggcaccatgtgcgtctccgacccgttccac 105
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                           
Query: 152    ctgttcgacatcgacggcaccctctgcgactccgaccccttccac 196
              ||||||||||||||||||||| | |||| ||||||||| ||||||
Sbjct: 555332 ctgttcgacatcgacggcaccatgtgcgtctccgacccgttccac 555288
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>dbj|AP002805.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0004I20
          Length = 94135

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 152   ctgttcgacatcgacggcaccctctgcgactccgaccccttccac 196
             ||||||||||||||||||||| | |||| ||||||||| ||||||
Sbjct: 31949 ctgttcgacatcgacggcaccatgtgcgtctccgacccgttccac 31905
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>dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0514G12
          Length = 138929

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                           
Query: 152    ctgttcgacatcgacggcaccctctgcgactccgaccccttccac 196
              ||||||||||||||||||||| | |||| ||||||||| ||||||
Sbjct: 100840 ctgttcgacatcgacggcaccatgtgcgtctccgacccgttccac 100796
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>gb|BT016551.1| Zea mays clone Contig384 mRNA sequence
          Length = 1157

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 152 ctgttcgacatcgacggcaccctctgcgactccgaccccttccac 196
           ||||||||||||||||| ||||| |||||||| || ||| |||||
Sbjct: 164 ctgttcgacatcgacgggaccctgtgcgactcggatcccctccac 208
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>gb|AY110061.1| Zea mays CL537_1 mRNA sequence
          Length = 1098

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 152 ctgttcgacatcgacggcaccctctgcgactccgaccccttccac 196
           ||||||||||||||||| ||||| |||||||| || ||| |||||
Sbjct: 53  ctgttcgacatcgacgggaccctgtgcgactcggatcccctccac 97
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>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29
          Length = 277000

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 150    tcctgttcgacatcgacggcaccctc 175
              |||||||||||| |||||||||||||
Sbjct: 130794 tcctgttcgacaacgacggcaccctc 130769
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 146     gcgatcctgttcgacatcgacggcac 171
               ||||||||| ||||||||||||||||
Sbjct: 5050410 gcgatcctgctcgacatcgacggcac 5050385
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 205    cttccgcgagctgctgcaggag 226
              ||||||||||||||||||||||
Sbjct: 673975 cttccgcgagctgctgcaggag 673996



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 89      gcgtcggacatgtcggccgc 108
               ||||||||||||||||||||
Sbjct: 3368775 gcgtcggacatgtcggccgc 3368794
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 203    gccttccgcgagctgctgcaggaggt 228
              |||||||||| |||||||||||||||
Sbjct: 518234 gccttccgcgcgctgctgcaggaggt 518209



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 299     gccctcgccggcgcgctgttcccg 322
               |||||||| |||||||||||||||
Sbjct: 2744621 gccctcgcgggcgcgctgttcccg 2744598
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 146    gcgatcctgttcgacatcgacggcac 171
              ||||||||| ||||||||||||||||
Sbjct: 336604 gcgatcctgctcgacatcgacggcac 336579



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 146     gcgatcctgttcgacatcgacggc 169
               ||||||||||||||||||| ||||
Sbjct: 4407064 gcgatcctgttcgacatcggcggc 4407087
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>gb|DQ230893.1| Anopheles gambiae strain SUA proximal 2La inversion breakpoint region
            genomic sequence
          Length = 4369

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 210  gcgagctgctgcaggaggttg 230
            |||||||||||||||||||||
Sbjct: 3371 gcgagctgctgcaggaggttg 3391
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>gb|AE005689.1| Caulobacter crescentus CB15 section 15 of 359 of the complete genome
          Length = 11119

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 51   agaaccgcaccgcgcgcgcct 71
            |||||||||||||||||||||
Sbjct: 1004 agaaccgcaccgcgcgcgcct 984
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 295     cgacgccctcgccggcgcgct 315
               |||||||||||||||||||||
Sbjct: 2213801 cgacgccctcgccggcgcgct 2213821
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 155     ttcgacatcgacggcaccctc 175
               |||||||||||||||||||||
Sbjct: 2034459 ttcgacatcgacggcaccctc 2034479
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>ref|XM_482395.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1694

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 305 gccggcgcgctgttcccgga 324
           ||||||||||||||||||||
Sbjct: 853 gccggcgcgctgttcccgga 872
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>gb|AE017129.1| Yersinia pestis biovar Medievalis str. 91001 section 3 of 16 of the
              complete genome
          Length = 290002

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     ccgcaccgcgcgcgcctacc 74
              ||||||||||||||||||||
Sbjct: 196930 ccgcaccgcgcgcgcctacc 196911
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>gb|AC160935.2| Mus musculus BAC clone RP23-456B7 from chromosome 9, complete sequence
          Length = 178690

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 389    gtaggagaactcaagggact 408
              ||||||||||||||||||||
Sbjct: 176933 gtaggagaactcaagggact 176914
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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 55      ccgcaccgcgcgcgcctacc 74
               ||||||||||||||||||||
Sbjct: 1097906 ccgcaccgcgcgcgcctacc 1097887
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>gb|BC023502.1| Mus musculus protein kinase C and casein kinase substrate in
           neurons 2, mRNA (cDNA clone MGC:32358 IMAGE:5031043),
           complete cds
          Length = 2826

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 ctgcgactccgaccccttcc 194
           ||||||||||||||||||||
Sbjct: 62  ctgcgactccgaccccttcc 43
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 257    gaggaattctacagcgcaaacatc 280
              |||||||||||||| |||||||||
Sbjct: 335440 gaggaattctacagagcaaacatc 335417
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 205     cttccgcgagctgctgcagg 224
               ||||||||||||||||||||
Sbjct: 2101602 cttccgcgagctgctgcagg 2101621
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>gb|AE008802.1| Salmonella typhimurium LT2, section 106 of 220 of the complete genome
          Length = 23759

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   ggatctgcgggagctggcgc 137
             ||||||||||||||||||||
Sbjct: 23360 ggatctgcgggagctggcgc 23341
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 310     cgcgctgttcccggagctcg 329
               ||||||||||||||||||||
Sbjct: 1380287 cgcgctgttcccggagctcg 1380268
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>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 55      ccgcaccgcgcgcgcctacc 74
               ||||||||||||||||||||
Sbjct: 1097544 ccgcaccgcgcgcgcctacc 1097525
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>emb|AJ414156.1| Yersinia pestis strain CO92 complete genome; segment 16/20
          Length = 220050

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  ccgcaccgcgcgcgcctacc 74
           ||||||||||||||||||||
Sbjct: 676 ccgcaccgcgcgcgcctacc 695
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 152   ctgttcgacatcgacggcaccctc 175
             ||||||||| ||||||||||||||
Sbjct: 46466 ctgttcgacctcgacggcaccctc 46443
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>ref|XM_686447.1| PREDICTED: Danio rerio similar to chordin-like 2 (LOC563085), mRNA
          Length = 1530

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  ttctacagcgcaaacatcag 282
            ||||||||||||||||||||
Sbjct: 1091 ttctacagcgcaaacatcag 1110
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>gb|AC158999.2| Mus musculus BAC clone RP24-201N16 from chromosome 9, complete sequence
          Length = 169860

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 389   gtaggagaactcaagggact 408
             ||||||||||||||||||||
Sbjct: 98209 gtaggagaactcaagggact 98190
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>dbj|AK052328.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330028P18 product:unclassifiable, full
            insert sequence
          Length = 3107

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 415  cctgaaggaactgtgcacat 434
            ||||||||||||||||||||
Sbjct: 1646 cctgaaggaactgtgcacat 1665
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 305      gccggcgcgctgttcccgga 324
                ||||||||||||||||||||
Sbjct: 19797742 gccggcgcgctgttcccgga 19797761
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 46       atacaagaaccgcaccgcgc 65
                ||||||||||||||||||||
Sbjct: 24245453 atacaagaaccgcaccgcgc 24245434
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 297     acgccctcgccggcgcgctgttcc 320
               |||||||||| |||||||||||||
Sbjct: 1037858 acgccctcgcgggcgcgctgttcc 1037881
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>gb|AC119867.11| Mus musculus chromosome 1, clone RP23-411L6, complete sequence
          Length = 215781

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    cctgaaggaactgtgcacat 434
              ||||||||||||||||||||
Sbjct: 106351 cctgaaggaactgtgcacat 106332
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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    ggatctgcgggagctggcgc 137
              ||||||||||||||||||||
Sbjct: 645315 ggatctgcgggagctggcgc 645334
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>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E05
          Length = 137364

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    atacaagaaccgcaccgcgc 65
             ||||||||||||||||||||
Sbjct: 57004 atacaagaaccgcaccgcgc 56985
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>emb|BX005026.10| Zebrafish DNA sequence from clone DKEY-11J5, complete sequence
          Length = 154034

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    ttctacagcgcaaacatcag 282
              ||||||||||||||||||||
Sbjct: 112826 ttctacagcgcaaacatcag 112845
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>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0007M04
          Length = 176293

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    gccggcgcgctgttcccgga 324
              ||||||||||||||||||||
Sbjct: 126693 gccggcgcgctgttcccgga 126712
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>dbj|AK072217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159I12, full
           insert sequence
          Length = 1694

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 305 gccggcgcgctgttcccgga 324
           ||||||||||||||||||||
Sbjct: 853 gccggcgcgctgttcccgga 872
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 292     caacgacgccctcgccggcg 311
               ||||||||||||||||||||
Sbjct: 2090696 caacgacgccctcgccggcg 2090715
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 118     ggatctgcgggagctggcgc 137
               ||||||||||||||||||||
Sbjct: 2414257 ggatctgcgggagctggcgc 2414238
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>emb|AJ629123.1| Streptomyces sp. DSM 40477 genomic region of the apramycin biosynthesis
             cluster
          Length = 41623

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   tcgacatcgacggcaccctc 175
             ||||||||||||||||||||
Sbjct: 22337 tcgacatcgacggcaccctc 22318
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>emb|AL583889.8| Mouse DNA sequence from clone RP23-10K12 on chromosome 15, complete
             sequence
          Length = 236344

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   ctgcgactccgaccccttcc 194
             ||||||||||||||||||||
Sbjct: 95129 ctgcgactccgaccccttcc 95110


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,682,856
Number of Sequences: 3902068
Number of extensions: 2682856
Number of successful extensions: 55444
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53972
Number of HSP's gapped (non-prelim): 1472
length of query: 434
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 412
effective length of database: 17,147,199,772
effective search space: 7064646306064
effective search space used: 7064646306064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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