| Clone Name | bast69b07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107646.1| Zea mays PCO072676 mRNA sequence Length = 941 Score = 95.6 bits (48), Expect = 1e-16 Identities = 116/139 (83%) Strand = Plus / Plus Query: 307 acaaggtgaagctggtggaccaagacgggcaggagcacgagtttgaggcgccggacgacg 366 |||||||||||||||| | || |||||| |||||||||||| ||||| || |||||| Sbjct: 338 acaaggtgaagctggtcggcccggacgggacggagcacgagttcgaggcccccgacgaca 397 Query: 367 cctacatccttgactcggcggagacggcaggggtggagctgccctactcgtgccgcgcgg 426 |||||||||| || |||| ||||| || |||||||||||||||| ||| |||||||| | Sbjct: 398 cctacatcctcgaggcggccgagaccgccggggtggagctgcccttctcctgccgcgccg 457 Query: 427 nggcgtgctcgacctgcgc 445 | | ||||| |||||||| Sbjct: 458 ggtcctgctccacctgcgc 476
>dbj|AB001386.1| Maize DNA for Fd VI, complete cds Length = 2351 Score = 95.6 bits (48), Expect = 1e-16 Identities = 116/139 (83%) Strand = Plus / Plus Query: 307 acaaggtgaagctggtggaccaagacgggcaggagcacgagtttgaggcgccggacgacg 366 |||||||||||||||| | || |||||| |||||||||||| ||||| || |||||| Sbjct: 1762 acaaggtgaagctggtcggcccggacgggacggagcacgagttcgaggcccccgacgaca 1821 Query: 367 cctacatccttgactcggcggagacggcaggggtggagctgccctactcgtgccgcgcgg 426 |||||||||| || |||| ||||| || |||||||||||||||| ||| |||||||| | Sbjct: 1822 cctacatcctcgaggcggccgagaccgccggggtggagctgcccttctcctgccgcgccg 1881 Query: 427 nggcgtgctcgacctgcgc 445 | | ||||| |||||||| Sbjct: 1882 ggtcctgctccacctgcgc 1900
>dbj|AB001385.1| Maize mRNA for Fd VI, complete cds Length = 845 Score = 95.6 bits (48), Expect = 1e-16 Identities = 116/139 (83%) Strand = Plus / Plus Query: 307 acaaggtgaagctggtggaccaagacgggcaggagcacgagtttgaggcgccggacgacg 366 |||||||||||||||| | || |||||| |||||||||||| ||||| || |||||| Sbjct: 336 acaaggtgaagctggtcggcccggacgggacggagcacgagttcgaggcccccgacgaca 395 Query: 367 cctacatccttgactcggcggagacggcaggggtggagctgccctactcgtgccgcgcgg 426 |||||||||| || |||| ||||| || |||||||||||||||| ||| |||||||| | Sbjct: 396 cctacatcctcgaggcggccgagaccgccggggtggagctgcccttctcctgccgcgccg 455 Query: 427 nggcgtgctcgacctgcgc 445 | | ||||| |||||||| Sbjct: 456 ggtcctgctccacctgcgc 474
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 89.7 bits (45), Expect = 7e-15 Identities = 92/108 (85%) Strand = Plus / Minus Query: 338 ggagcacgagtttgaggcgccggacgacgcctacatccttgactcggcggagacggcagg 397 |||||||||||| || || |||| ||||||| |||||| ||||| || |||||||| || Sbjct: 8467293 ggagcacgagttcgacgccccgggtgacgcctgcatcctggactccgctgagacggcggg 8467234 Query: 398 ggtggagctgccctactcgtgccgcgcggnggcgtgctcgacctgcgc 445 | ||||||||||||||||||||||||| | || ||||| |||||||| Sbjct: 8467233 gctggagctgccctactcgtgccgcgccggggattgctccacctgcgc 8467186 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ggagcacgaggaggaggagg 56 |||||||||||||||||||| Sbjct: 20073809 ggagcacgaggaggaggagg 20073790
>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0056I06 Length = 138653 Score = 89.7 bits (45), Expect = 7e-15 Identities = 92/108 (85%) Strand = Plus / Minus Query: 338 ggagcacgagtttgaggcgccggacgacgcctacatccttgactcggcggagacggcagg 397 |||||||||||| || || |||| ||||||| |||||| ||||| || |||||||| || Sbjct: 98886 ggagcacgagttcgacgccccgggtgacgcctgcatcctggactccgctgagacggcggg 98827 Query: 398 ggtggagctgccctactcgtgccgcgcggnggcgtgctcgacctgcgc 445 | ||||||||||||||||||||||||| | || ||||| |||||||| Sbjct: 98826 gctggagctgccctactcgtgccgcgccggggattgctccacctgcgc 98779
>gb|BT016313.1| Zea mays clone Contig146 mRNA sequence Length = 926 Score = 81.8 bits (41), Expect = 2e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 339 gagcacgagtttgaggcgccggacgacgcctacatccttgactcggcggagacggcaggg 398 |||||||||||||| || || ||||||||||||||||||||| | || ||||| || || Sbjct: 381 gagcacgagtttgatgctccagacgacgcctacatccttgacgcagccgagactgccggt 440 Query: 399 gtggagctgccctactcgtgccgcgcggnggcgtgctcgacctg 442 |||||| |||| ||||||||||| || | ||| ||||| ||||| Sbjct: 441 gtggagttgccatactcgtgccgtgctggggcttgctccacctg 484 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 119 gtcaggtttcaagatgtcaaccagcacgtttgcgacctcctgcgcgctcttgggcaatgt 178 |||||| ||||| ||||| |||||||| || || || |||||| |||| ||||||||||| Sbjct: 164 gtcaggattcaatatgtcgaccagcacattcgctacttcctgcacgctgttgggcaatgt 223 Query: 179 cggaacaaccggcgcctcccagaaagcggtcaagagc 215 ||||||| |||||||||| |||||| |||||| Sbjct: 224 tagaacaacgcaggcctcccagacagcggtgaagagc 260
>gb|AY104148.1| Zea mays PCO088579 mRNA sequence Length = 1090 Score = 81.8 bits (41), Expect = 2e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 339 gagcacgagtttgaggcgccggacgacgcctacatccttgactcggcggagacggcaggg 398 |||||||||||||| || || ||||||||||||||||||||| | || ||||| || || Sbjct: 523 gagcacgagtttgatgctccagacgacgcctacatccttgacgcagccgagactgccggt 582 Query: 399 gtggagctgccctactcgtgccgcgcggnggcgtgctcgacctg 442 |||||| |||| ||||||||||| || | ||| ||||| ||||| Sbjct: 583 gtggagttgccatactcgtgccgtgctggggcttgctccacctg 626 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 119 gtcaggtttcaagatgtcaaccagcacgtttgcgacctcctgcgcgctcttgggcaatgt 178 |||||| ||||| ||||| |||||||| || || || |||||| |||| ||||||||||| Sbjct: 306 gtcaggattcaatatgtcgaccagcacattcgctacttcctgcacgctgttgggcaatgt 365 Query: 179 cggaacaaccggcgcctcccagaaagcggtcaagagc 215 ||||||| |||||||||| |||||| |||||| Sbjct: 366 tagaacaacgcaggcctcccagacagcggtgaagagc 402
>gb|M73831.1|MZEFD3 Maize ferredoxin III (Fd) isoprotein mRNA, pFD3 Length = 705 Score = 81.8 bits (41), Expect = 2e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 339 gagcacgagtttgaggcgccggacgacgcctacatccttgactcggcggagacggcaggg 398 |||||||||||||| || || ||||||||||||||||||||| | || ||||| || || Sbjct: 216 gagcacgagtttgatgctccagacgacgcctacatccttgacgctgccgagactgccggt 275 Query: 399 gtggagctgccctactcgtgccgcgcggnggcgtgctcgacctg 442 |||||| |||| ||||||||||| || | ||| ||||| ||||| Sbjct: 276 gtggagttgccatactcgtgccgtgctggggcttgctccacctg 319 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 121 caggtttcaagatgtcaaccagcacgtttgcgacctcctgcgcgctcttgggcaatgtcg 180 |||| ||||| ||||| |||||||| || || || |||||| |||| ||||||||||| Sbjct: 1 caggattcaatatgtcgaccagcacattcgctacttcctgcacgctgttgggcaatgtta 60 Query: 181 gaacaaccggcgcctcccagaaagcggtcaagagc 215 ||||||| |||||||||| |||||| |||||| Sbjct: 61 gaacaacgcaggcctcccagacagcggtgaagagc 95
>dbj|AB001387.1| Maize DNA for Fd III, complete cds Length = 5179 Score = 81.8 bits (41), Expect = 2e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 339 gagcacgagtttgaggcgccggacgacgcctacatccttgactcggcggagacggcaggg 398 |||||||||||||| || || ||||||||||||||||||||| | || ||||| || || Sbjct: 4390 gagcacgagtttgatgctccagacgacgcctacatccttgacgctgccgagactgccggt 4449 Query: 399 gtggagctgccctactcgtgccgcgcggnggcgtgctcgacctg 442 |||||| |||| ||||||||||| || | ||| ||||| ||||| Sbjct: 4450 gtggagttgccatactcgtgccgtgctggggcttgctccacctg 4493 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 119 gtcaggtttcaagatgtcaaccagcacgtttgcgacctcctgcgcgctcttgggcaatgt 178 |||||| ||||| ||||| |||||||| || || || |||||| |||| ||||||||||| Sbjct: 4173 gtcaggattcaatatgtcgaccagcacattcgctacttcctgcacgctgttgggcaatgt 4232 Query: 179 cggaacaaccggcgcctcccagaaagcggtcaagagc 215 ||||||| |||||||||| |||||| |||||| Sbjct: 4233 tagaacaacgcaggcctcccagacagcggtgaagagc 4269
>ref|XM_470335.1| Oryza sativa (japonica cultivar-group), mRNA Length = 890 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 333 gggcaggagcacgagtttgaggcgccggacgacgcctacatccttgactcggcggagacg 392 ||||| ||||||||||| ||||| ||||| ||| ||||||||||||| | || ||||| Sbjct: 355 gggcaagagcacgagttcgaggctccggatgacacctacatccttgatgccgccgagacc 414 Query: 393 gcaggggtggagctgccctactcgtgccg 421 || || || ||||| |||||||| ||||| Sbjct: 415 gctggagtagagcttccctactcatgccg 443
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 333 gggcaggagcacgagtttgaggcgccggacgacgcctacatccttgactcggcggagacg 392 ||||| ||||||||||| ||||| ||||| ||| ||||||||||||| | || ||||| Sbjct: 34819929 gggcaagagcacgagttcgaggctccggatgacacctacatccttgatgccgccgagacc 34819988 Query: 393 gcaggggtggagctgccctactcgtgccg 421 || || || ||||| |||||||| ||||| Sbjct: 34819989 gctggagtagagcttccctactcatgccg 34820017
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 333 gggcaggagcacgagtttgaggcgccggacgacgcctacatccttgactcggcggagacg 392 ||||| ||||||||||| ||||| ||||| ||| ||||||||||||| | || ||||| Sbjct: 42721 gggcaagagcacgagttcgaggctccggatgacacctacatccttgatgccgccgagacc 42662 Query: 393 gcaggggtggagctgccctactcgtgccg 421 || || || ||||| |||||||| ||||| Sbjct: 42661 gctggagtagagcttccctactcatgccg 42633
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 333 gggcaggagcacgagtttgaggcgccggacgacgcctacatccttgactcggcggagacg 392 ||||| ||||||||||| ||||| ||||| ||| ||||||||||||| | || ||||| Sbjct: 34910001 gggcaagagcacgagttcgaggctccggatgacacctacatccttgatgccgccgagacc 34910060 Query: 393 gcaggggtggagctgccctactcgtgccg 421 || || || ||||| |||||||| ||||| Sbjct: 34910061 gctggagtagagcttccctactcatgccg 34910089
>gb|AY826849.1| Isochrysis galbana clone ISF1 chloroplast ferredoxin mRNA, partial cds; nuclear gene for chloroplast product Length = 764 Score = 58.0 bits (29), Expect = 3e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 405 ctgccctactcgtgccgcgcggnggcgtgctcgacctgcgcggg 448 ||||| |||||||||||||||| || ||||||||||||||||| Sbjct: 217 ctgccgtactcgtgccgcgcgggcgcctgctcgacctgcgcggg 260
>dbj|AK121063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058L21, full insert sequence Length = 857 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 333 gggcaggagcacgagtttgaggcgccggacgacgcctacatccttgactcggcggagacg 392 ||||| ||||||||||| ||||| ||||| ||| ||||||||||||| | || ||||| Sbjct: 330 gggcaagagcacgagttcgaggctccggatgacacctacatccttgatgccgccgagacc 389 Query: 393 gcaggggtggagctgccctactcgtgccg 421 || || || ||||| |||||||| ||||| Sbjct: 390 gctggagtagagcttccctactcatgccg 418
>ref|XM_472400.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 459 Score = 54.0 bits (27), Expect = 4e-04 Identities = 74/90 (82%) Strand = Plus / Plus Query: 356 gccggacgacgcctacatccttgactcggcggagacggcaggggtggagctgccctactc 415 |||||| ||| |||||||||| ||| |||| ||| || || || || ||||||||||| Sbjct: 222 gccggaggacacctacatcctggacgcggccgaggaagccggcgtcgacctgccctactc 281 Query: 416 gtgccgcgcggnggcgtgctcgacctgcgc 445 ||||||||| | |||||||| |||||||| Sbjct: 282 gtgccgcgccggcgcgtgctccacctgcgc 311
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 54.0 bits (27), Expect = 4e-04 Identities = 74/90 (82%) Strand = Plus / Plus Query: 356 gccggacgacgcctacatccttgactcggcggagacggcaggggtggagctgccctactc 415 |||||| ||| |||||||||| ||| |||| ||| || || || || ||||||||||| Sbjct: 108431 gccggaggacacctacatcctggacgcggccgaggaagccggcgtcgacctgccctactc 108490 Query: 416 gtgccgcgcggnggcgtgctcgacctgcgc 445 ||||||||| | |||||||| |||||||| Sbjct: 108491 gtgccgcgccggcgcgtgctccacctgcgc 108520
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 4e-04 Identities = 74/90 (82%) Strand = Plus / Plus Query: 356 gccggacgacgcctacatccttgactcggcggagacggcaggggtggagctgccctactc 415 |||||| ||| |||||||||| ||| |||| ||| || || || || ||||||||||| Sbjct: 20377798 gccggaggacacctacatcctggacgcggccgaggaagccggcgtcgacctgccctactc 20377857 Query: 416 gtgccgcgcggnggcgtgctcgacctgcgc 445 ||||||||| | |||||||| |||||||| Sbjct: 20377858 gtgccgcgccggcgcgtgctccacctgcgc 20377887
>dbj|AK120232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043H21, full insert sequence Length = 835 Score = 54.0 bits (27), Expect = 4e-04 Identities = 74/90 (82%) Strand = Plus / Plus Query: 356 gccggacgacgcctacatccttgactcggcggagacggcaggggtggagctgccctactc 415 |||||| ||| |||||||||| ||| |||| ||| || || || || ||||||||||| Sbjct: 417 gccggaggacacctacatcctggacgcggccgaggaagccggcgtcgacctgccctactc 476 Query: 416 gtgccgcgcggnggcgtgctcgacctgcgc 445 ||||||||| | |||||||| |||||||| Sbjct: 477 gtgccgcgccggcgcgtgctccacctgcgc 506
>dbj|AK062016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-F06, full insert sequence Length = 752 Score = 54.0 bits (27), Expect = 4e-04 Identities = 74/90 (82%) Strand = Plus / Plus Query: 356 gccggacgacgcctacatccttgactcggcggagacggcaggggtggagctgccctactc 415 |||||| ||| |||||||||| ||| |||| ||| || || || || ||||||||||| Sbjct: 380 gccggaggacacctacatcctggacgcggccgaggaagccggcgtcgacctgccctactc 439 Query: 416 gtgccgcgcggnggcgtgctcgacctgcgc 445 ||||||||| | |||||||| |||||||| Sbjct: 440 gtgccgcgccggcgcgtgctccacctgcgc 469
>gb|AC131719.5| Mus musculus BAC clone RP23-151H15 from chromosome 19, complete sequence Length = 216902 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 35 aaggagcacgaggaggaggaggcaagggaa 64 |||||| | ||||||||||||||||||||| Sbjct: 158508 aaggaggaggaggaggaggaggcaagggaa 158537
>gb|DQ334078.1| Drosophila miranda CG12109 gene, partial cds Length = 1074 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 32 cgcaaggagcacgaggaggaggaggc 57 ||||||||||||||| |||||||||| Sbjct: 874 cgcaaggagcacgagaaggaggaggc 899
>emb|CR377966.1| Pinus pinaster SSR, clone PPB6A11r Length = 516 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 aaggagcacgaggaggaggagg 56 |||||||||||||||||||||| Sbjct: 251 aaggagcacgaggaggaggagg 230
>ref|XM_508146.1| PREDICTED: Pan troglodytes similar to Protein-tyrosine phosphatase epsilon precursor (R-PTP-epsilon) (LOC450865), mRNA Length = 4458 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 aaggagcacgaggaggaggag 55 ||||||||||||||||||||| Sbjct: 1362 aaggagcacgaggaggaggag 1342
>ref|XM_506794.1| PREDICTED Oryza sativa (japonica cultivar-group), P0476C12.36 mRNA Length = 1059 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aggagcacgaggaggaggagg 56 ||||||||||||||||||||| Sbjct: 64 aggagcacgaggaggaggagg 84
>ref|NM_006504.3| Homo sapiens protein tyrosine phosphatase, receptor type, E (PTPRE), transcript variant 1, mRNA Length = 5376 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 aaggagcacgaggaggaggag 55 ||||||||||||||||||||| Sbjct: 468 aaggagcacgaggaggaggag 448
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 433 gctcgacctgcgcggggcaga 453 ||||||||||||||||||||| Sbjct: 1949218 gctcgacctgcgcggggcaga 1949198
>ref|XM_362048.1| Magnaporthe grisea 70-15 hypothetical protein (MG04493.4) partial cds Length = 1743 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gaggaggaggaggcaagggaa 64 ||||||||||||||||||||| Sbjct: 196 gaggaggaggaggcaagggaa 176
>ref|NM_015710.3| Homo sapiens glioma tumor suppressor candidate region gene 2 (GLTSCR2), mRNA Length = 1567 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1395 gtacaaggtgaagctggtgga 1415
>gb|AC118249.11| Mus musculus chromosome 19, clone RP23-397G23, complete sequence Length = 224129 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 gaggaggaggaggcaagggaa 64 ||||||||||||||||||||| Sbjct: 64722 gaggaggaggaggcaagggaa 64742
>gb|AY535000.1| Homo sapiens preS1 binding protein mRNA, complete cds Length = 1437 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1386 gtacaaggtgaagctggtgga 1406
>ref|XM_979221.1| PREDICTED: Mus musculus hypothetical protein LOC670114 (LOC670114), mRNA Length = 591 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aggagcacgaggaggaggagg 56 ||||||||||||||||||||| Sbjct: 428 aggagcacgaggaggaggagg 448 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aggagcacgaggaggaggagg 56 ||||||||||||||||||||| Sbjct: 308 aggagcacgaggaggaggagg 328 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aggagcacgaggaggaggag 55 |||||||||||||||||||| Sbjct: 413 aggagcacgaggaggaggag 432 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aggagcacgaggaggaggag 55 |||||||||||||||||||| Sbjct: 398 aggagcacgaggaggaggag 417
>ref|XM_979354.1| PREDICTED: Mus musculus hypothetical protein LOC670134 (LOC670134), mRNA Length = 600 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aggagcacgaggaggaggagg 56 ||||||||||||||||||||| Sbjct: 377 aggagcacgaggaggaggagg 397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aggagcacgaggaggaggagg 56 ||||||||||||||||||||| Sbjct: 359 aggagcacgaggaggaggagg 379
>gb|BC014009.2| Homo sapiens glioma tumor suppressor candidate region gene 2, mRNA (cDNA clone IMAGE:4039964), partial cds Length = 1525 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1380 gtacaaggtgaagctggtgga 1400
>gb|BC013235.1| Homo sapiens glioma tumor suppressor candidate region gene 2, mRNA (cDNA clone IMAGE:4154770) Length = 1499 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1381 gtacaaggtgaagctggtgga 1401
>emb|BX936293.11| Platypus DNA sequence from clone XX-516O5, complete sequence Length = 178175 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 31 gcgcaaggagcacgaggaggaggag 55 |||| |||||||||||||||||||| Sbjct: 16815 gcgcgaggagcacgaggaggaggag 16791 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 gcgcaaggagcacgaggaggagga 54 |||| ||||||||||||||||||| Sbjct: 16020 gcgcgaggagcacgaggaggagga 15997
>gb|BC004229.2| Homo sapiens glioma tumor suppressor candidate region gene 2, mRNA (cDNA clone IMAGE:3546165), partial cds Length = 1491 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1370 gtacaaggtgaagctggtgga 1390
>emb|CR662083.2|CNS0F9U1 Tetraodon nigroviridis full-length cDNA Length = 1177 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 cctcctcctccaagaagctgg 285 ||||||||||||||||||||| Sbjct: 988 cctcctcctccaagaagctgg 1008
>gb|BC021558.1| Homo sapiens cDNA clone IMAGE:5015020, **** WARNING: chimeric clone **** Length = 1874 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1735 gtacaaggtgaagctggtgga 1755
>emb|AL390236.21| Human DNA sequence from clone RP11-380J17 on chromosome 10 Contains the 3' end of the PTPRE gene for protein tyrosine phosphatase receptor type E and the 3' end of the MKI67 gene for antigen identified by monoclonal antibody Ki-67, complete sequence Length = 123057 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 aaggagcacgaggaggaggag 55 ||||||||||||||||||||| Sbjct: 62161 aaggagcacgaggaggaggag 62141
>emb|X75089.1|TAPETFFE Triticum aestivum petF gene for ferredoxin Length = 2244 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 acgtacaaggtgaagctggtg 323 ||||||||||||||||||||| Sbjct: 1673 acgtacaaggtgaagctggtg 1693
>emb|X54134.1|HSPTPE Human HPTP epsilon mRNA for protein tyrosine phosphatase epsilon Length = 2160 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 aaggagcacgaggaggaggag 55 ||||||||||||||||||||| Sbjct: 240 aaggagcacgaggaggaggag 220
>gb|BC013307.1| Homo sapiens, glioma tumor suppressor candidate region gene 2, clone IMAGE:2988686, mRNA Length = 1514 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1383 gtacaaggtgaagctggtgga 1403
>gb|BC010095.2| Homo sapiens glioma tumor suppressor candidate region gene 2, mRNA (cDNA clone MGC:19683 IMAGE:3501649), complete cds Length = 1601 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1429 gtacaaggtgaagctggtgga 1449
>gb|BC050062.1| Homo sapiens protein tyrosine phosphatase, receptor type, E, mRNA (cDNA clone MGC:48280 IMAGE:5274802), complete cds Length = 3709 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 aaggagcacgaggaggaggag 55 ||||||||||||||||||||| Sbjct: 547 aaggagcacgaggaggaggag 527
>emb|AL122063.1|HSM801207 Homo sapiens mRNA; cDNA DKFZp434C031 (from clone DKFZp434C031) Length = 1762 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 902 gtacaaggtgaagctggtgga 922
>gb|AC008745.7| Homo sapiens chromosome 19 clone CTD-2571L23, complete sequence Length = 180531 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 36914 gtacaaggtgaagctggtgga 36934
>dbj|AB214971.1| Oryzias latipes amh mRNA for anti-mullerian hormone, complete cds Length = 4464 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aggagcacgaggaggaggagg 56 ||||||||||||||||||||| Sbjct: 2830 aggagcacgaggaggaggagg 2850
>emb|CR318624.8| Zebrafish DNA sequence from clone CH211-227I15 in linkage group 24, complete sequence Length = 170084 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 gaggaggaggaggcaagggaa 64 ||||||||||||||||||||| Sbjct: 72498 gaggaggaggaggcaagggaa 72518
>emb|CR624324.1| full-length cDNA clone CS0DI074YC18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1407 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1365 gtacaaggtgaagctggtgga 1385
>emb|CR624154.1| full-length cDNA clone CS0DF009YJ13 of Fetal brain of Homo sapiens (human) Length = 1488 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1387 gtacaaggtgaagctggtgga 1407
>emb|CR622359.1| full-length cDNA clone CS0DC028YD06 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1469 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1372 gtacaaggtgaagctggtgga 1392
>emb|CR620661.1| full-length cDNA clone CS0DI043YL01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1432 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1377 gtacaaggtgaagctggtgga 1397
>emb|CR619993.1| full-length cDNA clone CS0DE004YD06 of Placenta of Homo sapiens (human) Length = 1360 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1314 gtacaaggtgaagctggtgga 1334
>emb|CR618849.1| full-length cDNA clone CS0DI001YD06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1427 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1381 gtacaaggtgaagctggtgga 1401
>emb|CR618822.1| full-length cDNA clone CS0CAP001YC16 of Thymus of Homo sapiens (human) Length = 1455 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1374 gtacaaggtgaagctggtgga 1394
>emb|CR617912.1| full-length cDNA clone CS0DI001YJ07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1439 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1380 gtacaaggtgaagctggtgga 1400
>emb|CR615162.1| full-length cDNA clone CS0DD008YE23 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1456 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1377 gtacaaggtgaagctggtgga 1397
>emb|CR614362.1| full-length cDNA clone CS0DJ001YF23 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1462 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1387 gtacaaggtgaagctggtgga 1407
>emb|CR614208.1| full-length cDNA clone CS0DF011YL14 of Fetal brain of Homo sapiens (human) Length = 1488 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1387 gtacaaggtgaagctggtgga 1407
>emb|CR609531.1| full-length cDNA clone CS0DI034YL01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1477 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1387 gtacaaggtgaagctggtgga 1407
>emb|CR613245.1| full-length cDNA clone CS0DC015YN08 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1420 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1370 gtacaaggtgaagctggtgga 1390
>emb|CR611242.1| full-length cDNA clone CS0DF002YO21 of Fetal brain of Homo sapiens (human) Length = 1446 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1372 gtacaaggtgaagctggtgga 1392
>emb|CR611227.1| full-length cDNA clone CS0DH007YH10 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1359 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1314 gtacaaggtgaagctggtgga 1334
>emb|CR610138.1| full-length cDNA clone CS0CAP006YD09 of Thymus of Homo sapiens (human) Length = 1404 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1358 gtacaaggtgaagctggtgga 1378
>emb|CR605735.1| full-length cDNA clone CS0DI022YE11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 889 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 843 gtacaaggtgaagctggtgga 863
>emb|CR604535.1| full-length cDNA clone CS0DF002YN23 of Fetal brain of Homo sapiens (human) Length = 1463 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1387 gtacaaggtgaagctggtgga 1407
>emb|CR603780.1| full-length cDNA clone CS0DA011YI11 of Neuroblastoma of Homo sapiens (human) Length = 1421 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1377 gtacaaggtgaagctggtgga 1397
>emb|CR602925.1| full-length cDNA clone CS0DH005YN03 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1481 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1381 gtacaaggtgaagctggtgga 1401
>emb|CR602831.1| full-length cDNA clone CS0DC006YP18 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1426 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1380 gtacaaggtgaagctggtgga 1400
>emb|CR601341.1| full-length cDNA clone CS0DI043YN01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1440 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1381 gtacaaggtgaagctggtgga 1401
>emb|CR600868.1| full-length cDNA clone CS0DI026YL01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1457 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1380 gtacaaggtgaagctggtgga 1400
>emb|CR600044.1| full-length cDNA clone CS0DI063YK01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1420 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1374 gtacaaggtgaagctggtgga 1394
>emb|CR598483.1| full-length cDNA clone CS0DI027YD21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1416 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1370 gtacaaggtgaagctggtgga 1390
>emb|CR598229.1| full-length cDNA clone CS0DI083YF19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1433 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1380 gtacaaggtgaagctggtgga 1400
>emb|CR597440.1| full-length cDNA clone CS0DI043YL19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1451 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1377 gtacaaggtgaagctggtgga 1397
>dbj|AK056111.1| Homo sapiens cDNA FLJ31549 fis, clone NT2RI2001030, highly similar to PROTEIN-TYROSINE PHOSPHATASE EPSILON PRECURSOR (EC 3.1.3.48) Length = 2304 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 aaggagcacgaggaggaggag 55 ||||||||||||||||||||| Sbjct: 2032 aaggagcacgaggaggaggag 2012
>emb|CR595527.1| full-length cDNA clone CS0DC001YI14 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1467 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1377 gtacaaggtgaagctggtgga 1397
>emb|CR591907.1| full-length cDNA clone CS0DB006YB15 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1416 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1370 gtacaaggtgaagctggtgga 1390
>emb|CR590467.1| full-length cDNA clone CS0DC026YB14 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1477 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1381 gtacaaggtgaagctggtgga 1401
>gb|AF406557.1|AF406557 Homo sapiens PTPRE (PTPRE) mRNA, partial cds Length = 679 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 aaggagcacgaggaggaggag 55 ||||||||||||||||||||| Sbjct: 403 aaggagcacgaggaggaggag 383
>gb|BC007248.1|BC007248 Homo sapiens, glioma tumor suppressor candidate region gene 2, clone IMAGE:2966906, mRNA, partial cds Length = 1530 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1374 gtacaaggtgaagctggtgga 1394
>gb|AF161389.1|AF161389 Homo sapiens HSPC271 mRNA, partial cds Length = 614 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 476 gtacaaggtgaagctggtgga 496
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 gtcctcctcctccaagaagct 283 ||||||||||||||||||||| Sbjct: 24460444 gtcctcctcctccaagaagct 24460464
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aggagcacgaggaggaggagg 56 ||||||||||||||||||||| Sbjct: 13172943 aggagcacgaggaggaggagg 13172963 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ggagcacgaggaggaggagg 56 |||||||||||||||||||| Sbjct: 34261059 ggagcacgaggaggaggagg 34261078
>gb|AY826847.1| Heterocapsa triquetra clone HTF1 chloroplast ferredoxin mRNA, complete cds; nuclear gene for chloroplast product Length = 622 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 402 gagctgccctactcgtgccgcgcgg 426 |||||||||||||| |||||||||| Sbjct: 329 gagctgccctactcctgccgcgcgg 353
>gb|AF182076.1|AF182076 Homo sapiens glioma tumor suppressor candidate region protein 2 (GLTSCR2) mRNA, complete cds Length = 1516 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1393 gtacaaggtgaagctggtgga 1413
>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012B02 Length = 149807 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 gtcctcctcctccaagaagct 283 ||||||||||||||||||||| Sbjct: 71917 gtcctcctcctccaagaagct 71937
>dbj|AP005778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0042G06 Length = 123571 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aggagcacgaggaggaggagg 56 ||||||||||||||||||||| Sbjct: 42973 aggagcacgaggaggaggagg 42993
>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476C12 Length = 157570 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aggagcacgaggaggaggagg 56 ||||||||||||||||||||| Sbjct: 149520 aggagcacgaggaggaggagg 149540
>dbj|AK024486.1| Homo sapiens mRNA for FLJ00085 protein, partial cds Length = 4186 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 4083 gtacaaggtgaagctggtgga 4103
>gb|BC039869.1| Homo sapiens, Similar to glioma tumor suppressor candidate region gene 2, clone IMAGE:4179633, mRNA Length = 1500 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1382 gtacaaggtgaagctggtgga 1402
>dbj|AK107075.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-F03, full insert sequence Length = 915 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 gtcctcctcctccaagaagct 283 ||||||||||||||||||||| Sbjct: 648 gtcctcctcctccaagaagct 628
>dbj|AK073631.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052D22, full insert sequence Length = 1059 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aggagcacgaggaggaggagg 56 ||||||||||||||||||||| Sbjct: 64 aggagcacgaggaggaggagg 84
>gb|AC019302.14| Mus musculus chromosome 8, clone RP23-428G22, complete sequence Length = 241836 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 387 gagacggcaggggtggagctgccct 411 |||||||||| |||||||||||||| Sbjct: 38798 gagacggcagaggtggagctgccct 38774
>gb|BC006311.2| Homo sapiens glioma tumor suppressor candidate region gene 2, mRNA (cDNA clone MGC:12572 IMAGE:4111480), complete cds Length = 1510 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1392 gtacaaggtgaagctggtgga 1412
>emb|AL359336.1|IR2073509 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 2073509 Length = 1476 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1353 gtacaaggtgaagctggtgga 1373
>emb|AL359335.1|IR1902571 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1902571 Length = 1459 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1329 gtacaaggtgaagctggtgga 1349
>gb|AC131325.8| Mus musculus chromosome 17, clone RP23-431O10, complete sequence Length = 191331 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 aggagcacgaggaggaggagg 56 ||||||||||||||||||||| Sbjct: 39964 aggagcacgaggaggaggagg 39944
>gb|AC170878.4| Mus musculus BAC clone RP24-226F17 from chromosome 19, complete sequence Length = 148454 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 aggagcacgaggaggaggagg 56 ||||||||||||||||||||| Sbjct: 128839 aggagcacgaggaggaggagg 128819
>gb|BC031078.1| Homo sapiens cDNA clone IMAGE:5295028, containing frame-shift errors Length = 2633 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 aaggagcacgaggaggaggag 55 ||||||||||||||||||||| Sbjct: 470 aaggagcacgaggaggaggag 450
>gb|BC013203.1| Homo sapiens glioma tumor suppressor candidate region gene 2, mRNA (cDNA clone IMAGE:4178912) Length = 1525 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gtacaaggtgaagctggtgga 325 ||||||||||||||||||||| Sbjct: 1398 gtacaaggtgaagctggtgga 1418
>gb|AC166773.7| Mus musculus chromosome 7, clone RP24-303J15, complete sequence Length = 193859 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 aaggagcacgaggaggaggaggca 58 |||||| ||||||||||||||||| Sbjct: 156775 aaggaggacgaggaggaggaggca 156752
>gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0048I21, complete sequence Length = 137650 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 gaggcgccggacgacgcctacatc 374 |||||||||||||||| ||||||| Sbjct: 24159 gaggcgccggacgacgtctacatc 24136
>ref|XM_523763.1| PREDICTED: Pan troglodytes similar to pre-mRNA processing 8 protein (LOC468374), mRNA Length = 8634 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agcagcctgagcttcctcgg 232 |||||||||||||||||||| Sbjct: 6284 agcagcctgagcttcctcgg 6265
>gb|AC165958.2| Mus musculus BAC clone RP23-417I20 from chromosome 16, complete sequence Length = 186202 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 acagtcaggtttcaagatgt 135 |||||||||||||||||||| Sbjct: 71697 acagtcaggtttcaagatgt 71678
>ref|XM_475262.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2568 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 gaggcgccggacgacgcctacatc 374 |||||||||||||||| ||||||| Sbjct: 1267 gaggcgccggacgacgtctacatc 1290
>ref|NM_001034818.1| Gallus gallus lin-28 homolog B (C. elegans) (LIN28B), mRNA Length = 1312 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ggagcacgaggaggaggagg 56 |||||||||||||||||||| Sbjct: 210 ggagcacgaggaggaggagg 229
>gb|AC169508.1| Mus musculus BAC clone RP23-167I21 from chromosome 16, complete sequence Length = 211870 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 acagtcaggtttcaagatgt 135 |||||||||||||||||||| Sbjct: 24219 acagtcaggtttcaagatgt 24200
>gb|AC146187.2| Pan troglodytes BAC clone RP43-25A10 from 7, complete sequence Length = 156796 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gtcctcctcctccaagaagc 282 |||||||||||||||||||| Sbjct: 136049 gtcctcctcctccaagaagc 136068
>gb|BC054591.1| Danio rerio ATPase, Na+/K+ transporting, alpha 1a.3 polypeptide, mRNA (cDNA clone MGC:64001 IMAGE:6792683), complete cds Length = 3260 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 caggagcacgagtttgaggc 355 |||||||||||||||||||| Sbjct: 735 caggagcacgagtttgaggc 716
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 gaggcgccggacgacgcctacatc 374 |||||||||||||||| ||||||| Sbjct: 153182 gaggcgccggacgacgtctacatc 153159
>ref|XM_817953.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.6k15.2400) partial mRNA Length = 2613 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gcagcctgagcttcctcggc 233 |||||||||||||||||||| Sbjct: 1628 gcagcctgagcttcctcggc 1609
>gb|AC009171.6| Homo sapiens chromosome 16 clone RP11-95P2, complete sequence Length = 175022 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 ggcaggggtggagctgccct 411 |||||||||||||||||||| Sbjct: 78750 ggcaggggtggagctgccct 78731
>gb|AC007027.3| Homo sapiens PAC clone RP5-832O14 from 7, complete sequence Length = 112066 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 ggcaggggtggagctgccct 411 |||||||||||||||||||| Sbjct: 4657 ggcaggggtggagctgccct 4638
>gb|DQ127227.1| Gallus gallus LIN28B mRNA, complete cds Length = 1312 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ggagcacgaggaggaggagg 56 |||||||||||||||||||| Sbjct: 210 ggagcacgaggaggaggagg 229
>emb|AL592428.6| Human DNA sequence from clone RP11-116P2 on chromosome 6, complete sequence Length = 86630 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gtcaggtttcaagatgtcaa 138 |||||||||||||||||||| Sbjct: 21088 gtcaggtttcaagatgtcaa 21069
>emb|AL160053.15| Human DNA sequence from clone RP11-536D16 on chromosome 9 Contains the 3' end of the variant for the C9orf93 gene for chromosome 9 open reading frame 93, complete sequence Length = 172845 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 aggagcacgaggaggaggaggcaa 59 |||||||||||||| ||||||||| Sbjct: 131030 aggagcacgaggagcaggaggcaa 131007
>ref|XM_788944.1| PREDICTED: Strongylocentrotus purpuratus similar to CG12367-PA (LOC589300), mRNA Length = 1857 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 aaggagcacgaggaggaggaggca 58 |||||||| ||||||||||||||| Sbjct: 992 aaggagcaggaggaggaggaggca 1015
>gb|AC108727.6| Homo sapiens 3 BAC RP11-231L11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155898 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 tcctcctcctccaagaagct 283 |||||||||||||||||||| Sbjct: 42042 tcctcctcctccaagaagct 42023
>gb|DQ098685.1| Carassius auratus x Cyprinus carpio HMG box transcription factor Sox9a mRNA, complete cds Length = 1748 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tcagacacagagaacacgcg 33 |||||||||||||||||||| Sbjct: 351 tcagacacagagaacacgcg 370
>emb|CR857303.1| Pongo pygmaeus mRNA; cDNA DKFZp469D1521 (from clone DKFZp469D1521) Length = 2993 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agcagcctgagcttcctcgg 232 |||||||||||||||||||| Sbjct: 430 agcagcctgagcttcctcgg 411
>dbj|AK075173.1| Homo sapiens cDNA FLJ90692 fis, clone PLACE1006443, weakly similar to Homo sapiens PB39 mRNA Length = 2643 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agcagcctgagcttcctcgg 232 |||||||||||||||||||| Sbjct: 95 agcagcctgagcttcctcgg 76
>dbj|AK075068.1| Homo sapiens cDNA FLJ90587 fis, clone PLACE1000914, weakly similar to Homo sapiens PB39 mRNA Length = 2589 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agcagcctgagcttcctcgg 232 |||||||||||||||||||| Sbjct: 41 agcagcctgagcttcctcgg 22
>gb|AF289592.1|AF289592 Homo sapiens clone pp7664 unknown mRNA Length = 2078 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agcagcctgagcttcctcgg 232 |||||||||||||||||||| Sbjct: 546 agcagcctgagcttcctcgg 527
>gb|AC121223.5| Rattus norvegicus BAC CH230-70M4 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 263147 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gaggaggaggaggcaaggga 63 |||||||||||||||||||| Sbjct: 212580 gaggaggaggaggcaaggga 212599
>gb|AF236365.1|AF236363S3 Mus musculus protein serine kinase Pskh1 (Pskh1) gene, exon 3 and complete cds; chymotrysin A CTRA-1 (Ctra1) gene, exons 1 through 7 and complete cds; and prosome Mecl1 (Psmb10) gene, last exon and partial cds Length = 7895 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 gcctgaggtcctcctcctcc 275 |||||||||||||||||||| Sbjct: 7714 gcctgaggtcctcctcctcc 7695
>gb|AC130343.7| Homo sapiens chromosome 17, clone RP11-961A15, complete sequence Length = 217253 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 agcagcctgagcttcctcgg 232 |||||||||||||||||||| Sbjct: 66082 agcagcctgagcttcctcgg 66101
>gb|AC159265.2| Mus musculus BAC clone RP23-462H20 from chromosome 8, complete sequence Length = 201728 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 gcctgaggtcctcctcctcc 275 |||||||||||||||||||| Sbjct: 193195 gcctgaggtcctcctcctcc 193176
>gb|AF308598.1|AF308598 Danio rerio Na+/K+ ATPase alpha subunit isoform 4 (atp1a1a.3) mRNA, complete cds Length = 3275 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 caggagcacgagtttgaggc 355 |||||||||||||||||||| Sbjct: 761 caggagcacgagtttgaggc 742
>tpg|BK005642.1| TPA: TPA_exp: Homo sapiens LAT4 mRNA, complete cds Length = 3024 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agcagcctgagcttcctcgg 232 |||||||||||||||||||| Sbjct: 451 agcagcctgagcttcctcgg 432
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 acggcaggggtggagctgcc 409 |||||||||||||||||||| Sbjct: 117473 acggcaggggtggagctgcc 117454
>emb|CR353371.1| Gallus gallus finished cDNA, clone ChEST26i18 Length = 1312 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ggagcacgaggaggaggagg 56 |||||||||||||||||||| Sbjct: 210 ggagcacgaggaggaggagg 229
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 gaggcgccggacgacgcctacatc 374 |||||||||||||||| ||||||| Sbjct: 20897381 gaggcgccggacgacgtctacatc 20897358 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 aggtcctcctcctccaagaagctg 284 ||||||| |||||||||||||||| Sbjct: 175943 aggtccttctcctccaagaagctg 175920
>gb|BC071859.1| Homo sapiens solute carrier family 43, member 2, mRNA (cDNA clone MGC:88527 IMAGE:6572285), complete cds Length = 2032 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agcagcctgagcttcctcgg 232 |||||||||||||||||||| Sbjct: 501 agcagcctgagcttcctcgg 482
>dbj|AB120364.1| Homo sapiens SLC43A2 mRNA for L-type amino acid transporter 4, complete cds Length = 3271 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agcagcctgagcttcctcgg 232 |||||||||||||||||||| Sbjct: 669 agcagcctgagcttcctcgg 650
>ref|NM_131688.1| Danio rerio ATPase, Na+/K+ transporting, alpha 1a.3 polypeptide (atp1a1a.3), mRNA Length = 3275 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 caggagcacgagtttgaggc 355 |||||||||||||||||||| Sbjct: 761 caggagcacgagtttgaggc 742
>ref|NM_152346.1| Homo sapiens solute carrier family 43, member 2 (SLC43A2), mRNA Length = 3024 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agcagcctgagcttcctcgg 232 |||||||||||||||||||| Sbjct: 451 agcagcctgagcttcctcgg 432
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 6.2 Identities = 37/43 (86%) Strand = Plus / Plus Query: 400 tggagctgccctactcgtgccgcgcggnggcgtgctcgacctg 442 |||| ||||||| ||| |||||||||| || ||||||||||| Sbjct: 3822132 tggacctgcccttctcctgccgcgcgggcgcctgctcgacctg 3822174
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ggagcacgaggaggaggagg 56 |||||||||||||||||||| Sbjct: 96332 ggagcacgaggaggaggagg 96351
>dbj|AP003930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1657_A07 Length = 125217 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ggagcacgaggaggaggagg 56 |||||||||||||||||||| Sbjct: 38412 ggagcacgaggaggaggagg 38393
>dbj|AK061594.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E11, full insert sequence Length = 1858 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 gaggcgccggacgacgcctacatc 374 |||||||||||||||| ||||||| Sbjct: 401 gaggcgccggacgacgtctacatc 424
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 ttcctcggccgaggcgcgccgcag 248 ||||||||||| |||||||||||| Sbjct: 48731 ttcctcggccgcggcgcgccgcag 48708
>gb|AC110118.8| Rattus norvegicus BAC CH230-310N6 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 175663 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gaggaggaggaggcaaggga 63 |||||||||||||||||||| Sbjct: 123754 gaggaggaggaggcaaggga 123773
>gb|AC133499.3| Mus musculus BAC clone RP24-248F14 from 8, complete sequence Length = 181064 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 gcctgaggtcctcctcctcc 275 |||||||||||||||||||| Sbjct: 130202 gcctgaggtcctcctcctcc 130221
>gb|U77785.1|MMU77785 Mus musculus Lmp10 proteasome subunit gene, complete cds Length = 2733 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 gcctgaggtcctcctcctcc 275 |||||||||||||||||||| Sbjct: 2669 gcctgaggtcctcctcctcc 2688
>gb|BC027923.1| Homo sapiens solute carrier family 43, member 2, mRNA (cDNA clone MGC:34680 IMAGE:5309751), complete cds Length = 3024 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 agcagcctgagcttcctcgg 232 |||||||||||||||||||| Sbjct: 451 agcagcctgagcttcctcgg 432
>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12, complete sequence Length = 160603 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 aggtcctcctcctccaagaagctg 284 ||||||| |||||||||||||||| Sbjct: 58127 aggtccttctcctccaagaagctg 58104
>emb|AJ311598.1|GCY311598 Geodia cydonium geocyaf gene for putative aggregation factor Length = 1714 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 36 aggagcacgaggaggaggaggcaaggga 63 ||||||| |||| ||||||||||||||| Sbjct: 63 aggagcaggaggcggaggaggcaaggga 90
>dbj|D85562.1| Mus musculus DNA for proteasome subunit MECL1, complete cds Length = 3187 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 gcctgaggtcctcctcctcc 275 |||||||||||||||||||| Sbjct: 3123 gcctgaggtcctcctcctcc 3142 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,360,375 Number of Sequences: 3902068 Number of extensions: 4360375 Number of successful extensions: 119158 Number of sequences better than 10.0: 150 Number of HSP's better than 10.0 without gapping: 153 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117890 Number of HSP's gapped (non-prelim): 1267 length of query: 461 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 439 effective length of database: 17,147,199,772 effective search space: 7527620699908 effective search space used: 7527620699908 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)